View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0899_low_25 (Length: 264)

Name: NF0899_low_25
Description: NF0899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0899_low_25
NF0899_low_25
[»] chr3 (5 HSPs)
chr3 (30-251)||(6985782-6986003)
chr3 (30-251)||(8129831-8130052)
chr3 (195-247)||(52251167-52251219)
chr3 (195-245)||(19548529-19548579)
chr3 (195-248)||(48929772-48929825)
[»] chr4 (6 HSPs)
chr4 (30-251)||(22877504-22877725)
chr4 (30-251)||(40687947-40688168)
chr4 (30-248)||(19163219-19163436)
chr4 (30-200)||(17874775-17874945)
chr4 (30-130)||(23130969-23131069)
chr4 (31-254)||(54684491-54684714)
[»] chr2 (6 HSPs)
chr2 (30-251)||(13415563-13415784)
chr2 (30-251)||(27951458-27951678)
chr2 (30-251)||(6727816-6728037)
chr2 (30-248)||(2207864-2208082)
chr2 (31-103)||(36931066-36931138)
chr2 (193-248)||(43724184-43724239)
[»] scaffold0750 (1 HSPs)
scaffold0750 (30-251)||(5931-6152)
[»] scaffold0124 (1 HSPs)
scaffold0124 (30-251)||(22293-22514)
[»] scaffold0036 (1 HSPs)
scaffold0036 (30-251)||(44848-45068)
[»] chr8 (7 HSPs)
chr8 (30-251)||(4310873-4311094)
chr8 (30-153)||(8564794-8564917)
chr8 (28-128)||(39297721-39297821)
chr8 (195-247)||(35029267-35029319)
chr8 (195-245)||(5802160-5802210)
chr8 (195-245)||(12331901-12331951)
chr8 (195-245)||(30426484-30426534)
[»] scaffold0351 (1 HSPs)
scaffold0351 (30-248)||(13034-13252)
[»] chr5 (3 HSPs)
chr5 (30-254)||(35837089-35837313)
chr5 (30-251)||(36255659-36255880)
chr5 (195-248)||(25671997-25672050)
[»] chr7 (3 HSPs)
chr7 (30-248)||(45165601-45165819)
chr7 (30-248)||(39694351-39694569)
chr7 (31-248)||(6343682-6343899)
[»] chr1 (3 HSPs)
chr1 (31-254)||(30712915-30713138)
chr1 (195-248)||(45270286-45270339)
chr1 (195-244)||(41150059-41150108)
[»] chr6 (3 HSPs)
chr6 (31-248)||(15602205-15602422)
chr6 (31-184)||(28633359-28633512)
chr6 (195-248)||(34434309-34434362)
[»] scaffold0024 (1 HSPs)
scaffold0024 (202-244)||(87248-87290)


Alignment Details
Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 30 - 251
Target Start/End: Original strand, 6985782 - 6986003
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6985782 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacaaaag 6985881  T
Q  130 catgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 229  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6985882 catgcctctgaattcaagataccatgatatgctaaattagacattgtatgaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 6985981  T
Q  230 catgtttgtgccaaaccaattc 251  Q
    ||||||||||||||||||||||    
T  6985982 catgtttgtgccaaaccaattc 6986003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 30 - 251
Target Start/End: Original strand, 8129831 - 8130052
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  8129831 tatccaagacctcaccaaaaaccataaagaatcaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacaacctgttacacataag 8129930  T
Q  130 catgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 229  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8129931 catgcctctgaattcaagataccacgaaatattaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 8130030  T
Q  230 catgtttgtgccaaaccaattc 251  Q
    ||||||||||||||||||||||    
T  8130031 catgtttgtgccaaaccaattc 8130052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 52251219 - 52251167
Alignment:
Q  195 caacctccaagcaaaaatagacaccttgaggggaacatgtttgtgccaaacca 247  Q
    |||||||||||||||||| || ||||| || ||||||||||| ||||||||||    
T  52251219 caacctccaagcaaaaatggaaaccttaagtggaacatgtttatgccaaacca 52251167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 19548579 - 19548529
Alignment:
Q  195 caacctccaagcaaaaatagacaccttgaggggaacatgtttgtgccaaac 245  Q
    |||||||||||||||||| || ||||| || ||||||||||| ||||||||    
T  19548579 caacctccaagcaaaaattgagaccttaagtggaacatgtttatgccaaac 19548529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 48929772 - 48929825
Alignment:
Q  195 caacctccaagcaaaaatagacaccttgaggggaacatgtttgtgccaaaccaa 248  Q
    ||||||||||||||||||| | ||||| || ||||||||  |||||||||||||    
T  48929772 caacctccaagcaaaaataaagaccttaagcggaacatgaatgtgccaaaccaa 48929825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 30 - 251
Target Start/End: Complemental strand, 22877725 - 22877504
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22877725 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 22877626  T
Q  130 catgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 229  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  22877625 catgcctctgaattcaagataccacgatatgctaaattagactttgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttaagggaaa 22877526  T
Q  230 catgtttgtgccaaaccaattc 251  Q
    ||||||||||||||||| ||||    
T  22877525 catgtttgtgccaaacccattc 22877504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 30 - 251
Target Start/End: Original strand, 40687947 - 40688168
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||  ||||||||||||| |||||||||     
T  40687947 tatccaagacctcaccaacgaccataaagaaccaaagaagctgcaagacaaaaataaatgtcgagcatcttccaataaaccacatcctgacacacataaa 40688046  T
Q  130 catgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 229  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40688047 catgcctctgaattcaatataccacgatatgctaaattagactttgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttaaggggaa 40688146  T
Q  230 catgtttgtgccaaaccaattc 251  Q
    | ||||||||||||||||||||    
T  40688147 cctgtttgtgccaaaccaattc 40688168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 30 - 248
Target Start/End: Complemental strand, 19163436 - 19163219
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    |||||| || ||||||||  ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||  | |||||| |||| |||||||||     
T  19163436 tatccaggatctcaccaacgaccataaagaaccaaagaagctgcaagacaaaaataaatgtcgagcatcttccaaaacaccacaccctgacacacataaa 19163337  T
Q  130 catgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 229  Q
    || |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||    
T  19163336 caagcctctgaattcaaaataccacgatatgctaaattagactttgtaggaagtctatctcgaatcaatctccaagcaaaaatagaca-cttaaggggaa 19163238  T
Q  230 catgtttgtgccaaaccaa 248  Q
    | |||||||||||||||||    
T  19163237 cctgtttgtgccaaaccaa 19163219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 30 - 200
Target Start/End: Original strand, 17874775 - 17874945
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  17874775 tatccaagacctcaccaaagaccataaagaaccaaagaagctgcacgacaaaaataaatgacgagcatcttccacgaaaccacatcctgacacacataag 17874874  T
Q  130 catgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacct 200  Q
    || |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||    
T  17874875 cacgcctctgaattcaagataccacaatatgctaaattagacattgtaggaagtcgatctcgaaacaacct 17874945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 23131069 - 23130969
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  23131069 tatccaagacctcaccaaaaaccataaagaaccaaaaaaactgcaagacaaaaataaatatcgtgcatcttccacgaaaccgcatcctgtcacacataag 23130970  T
Q  130 c 130  Q
    |    
T  23130969 c 23130969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 254
Target Start/End: Original strand, 54684491 - 54684714
Alignment:
Q  31 atccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataagc 130  Q
    |||||||||||||| |||  |||||||||||||||| | |||||||||| ||||| ||| |||||||||||||  |  ||||| |||| ||||||||| |    
T  54684491 atccaagacctcactaaaggccataaagaaccaaagcatctgcaagacagaaatagatggcgtgcatcttccaacagtccacaacctgacacacataaac 54684590  T
Q  131 atgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaac 230  Q
    | |||| | ||| ||||||||||||   |||||| |||||| | || ||||||| ||| |||| ||||| |||||| |||||||||||||| || |||||    
T  54684591 acgcctgtaaatccaagataccacgggttgctaagttagacttagtgggaagtcgatcacgaagcaaccgccaagcgaaaatagacaccttaagcggaac 54684690  T
Q  231 atgtttgtgccaaaccaattcatc 254  Q
    ||| || ||||||| ||| |||||    
T  54684691 atgcttatgccaaatcaaatcatc 54684714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 30 - 251
Target Start/End: Original strand, 13415563 - 13415784
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  13415563 tatccaagacctcaccaaagaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcttgacacacataag 13415662  T
Q  130 catgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 229  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  13415663 catgcctctgaattcaaaataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagaaaaaatagacaccttaaggggaa 13415762  T
Q  230 catgtttgtgccaaaccaattc 251  Q
    ||||||||||||||||||||||    
T  13415763 catgtttgtgccaaaccaattc 13415784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 30 - 251
Target Start/End: Complemental strand, 27951678 - 27951458
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  27951678 tatccaagaccgcaccaaaaaccataaagaaccaaaaaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgacacacataaa 27951579  T
Q  130 catgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 229  Q
     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||| |||||||    
T  27951578 -atgcctctgaattcaatataccacgatatgctaaattagacattgtaggaagtctgtctcgaatcagcctccaagcaaaaataaacaccttaaggggaa 27951480  T
Q  230 catgtttgtgccaaaccaattc 251  Q
    ||||||||||||||||||||||    
T  27951479 catgtttgtgccaaaccaattc 27951458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 30 - 251
Target Start/End: Complemental strand, 6728037 - 6727816
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||  |||||||| |||| |||||||||     
T  6728037 tatccaagacctcaccaacgaccataaagaaccaaagaagctgcaagacaaaaataaatgtcgagcatcttccaataaaccacaccctgacacacataaa 6727938  T
Q  130 catgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 229  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6727937 catgcctctgaattcaagataccacgatatgctaaattagactttgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttaaggggaa 6727838  T
Q  230 catgtttgtgccaaaccaattc 251  Q
    | ||||||||||||||||||||    
T  6727837 cctgtttgtgccaaaccaattc 6727816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 30 - 248
Target Start/End: Complemental strand, 2208082 - 2207864
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    ||||||||| |||||||    ||||||  ||||||| || ||||||||||||||||||||||| || |||||||  || ||||| |||| |||||||||     
T  2208082 tatccaagatctcaccagcggccataataaaccaaaaaatctgcaagacaaaaataaatgtcgagcgtcttccaataatccacaccctgacacacataaa 2207983  T
Q  130 catgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 229  Q
    |||||||||||| |||| ||||||||  | |||||||| ||| | ||||| ||||| ||||||||||| ||||||||||||||||||||||| || ||||    
T  2207982 catgcctctgaactcaaaataccacgggaagctaaattggacttggtagggagtctgtctcgaatcaatctccaagcaaaaatagacaccttaagaggaa 2207883  T
Q  230 catgtttgtgccaaaccaa 248  Q
    | |||||||||||||||||    
T  2207882 cctgtttgtgccaaaccaa 2207864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 36931066 - 36931138
Alignment:
Q  31 atccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttcca 103  Q
    |||||||||||||| |||  ||||||||||||||||    ||||||||||||||| |||||||||||||||||    
T  36931066 atccaagacctcactaaaggccataaagaaccaaagtcgttgcaagacaaaaatagatgtcgtgcatcttcca 36931138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 43724239 - 43724184
Alignment:
Q  193 atcaacctccaagcaaaaatagacaccttgaggggaacatgtttgtgccaaaccaa 248  Q
    |||||||||||||||||||| || ||||| || |||||||| ||||||||||||||    
T  43724239 atcaacctccaagcaaaaattgagaccttaagcggaacatgattgtgccaaaccaa 43724184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 30 - 251
Target Start/End: Original strand, 5931 - 6152
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| | | |||||||||||||    
T  5931 tatccaagacctcaccaaaaaccataaagaaccaaagaaactacaagacaaaaataaatgtcgtgcatcttccacaaaaccagaacttgtcacacataag 6030  T
Q  130 catgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 229  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6031 catgcctttgaattcaagataccacgaaatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 6130  T
Q  230 catgtttgtgccaaaccaattc 251  Q
    ||||||||||||||||||||||    
T  6131 catgtttgtgccaaaccaattc 6152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 30 - 251
Target Start/End: Original strand, 22293 - 22514
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| | | |||||||||||||    
T  22293 tatccaagacctcaccaaaaaccataaagaaccaaagaaactacaagacaaaaataaatgtcgtgcatcttccacaaaaccagaacttgtcacacataag 22392  T
Q  130 catgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 229  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22393 catgcctttgaattcaagataccacgaaatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 22492  T
Q  230 catgtttgtgccaaaccaattc 251  Q
    ||||||||||||||||||||||    
T  22493 catgtttgtgccaaaccaattc 22514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 30 - 251
Target Start/End: Complemental strand, 45068 - 44848
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  45068 tatccaagaccgcaccaaaaaccataaagaaccaaaaaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgacacacataaa 44969  T
Q  130 catgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 229  Q
     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||| |||||||    
T  44968 -atgcctctgaattcaatataccacgatatgctaaattagacattgtaggaagtctgtctcgaatcagcctccaagcaaaaataaacaccttaaggggaa 44870  T
Q  230 catgtttgtgccaaaccaattc 251  Q
    ||||||||||||||||||||||    
T  44869 catgtttgtgccaaaccaattc 44848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 30 - 251
Target Start/End: Complemental strand, 4311094 - 4310873
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    ||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||  |||||||| |||  |||||||||     
T  4311094 tatccaagatctcaccaatgaccataaagaaccaaagaagctgaaagacaaaaataaatgtcgagcatcttccaataaaccacaccctaacacacataaa 4310995  T
Q  130 catgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 229  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||    
T  4310994 catgcctctgaattcaaaataccacgatatgctaaattagactttgtaggaagtctatctcaaatcaatctccaagcaaaaatagacaccttaaggggaa 4310895  T
Q  230 catgtttgtgccaaaccaattc 251  Q
    | ||||||||||||||||||||    
T  4310894 cctgtttgtgccaaaccaattc 4310873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 153
Target Start/End: Complemental strand, 8564917 - 8564794
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    ||||||||| ||||||||  ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||  |||||||| |||| ||||||| |     
T  8564917 tatccaagatctcaccaatgaccataaagaaccaaagaagctgcaagacaaaaataaatgtcgagcatcttccaaaaaaccacaccctgacacacattaa 8564818  T
Q  130 catgcctctgaattcaagatacca 153  Q
    ||||||||||||||||| ||||||    
T  8564817 catgcctctgaattcaaaatacca 8564794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 39297821 - 39297721
Alignment:
Q  28 catatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacata 127  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||| || |||| |||| | ||  |||||||||| ||||||||  ||| ||||||||    
T  39297821 catatccaagacctcaccaaagaccataaagaaccaaagaagctgcacgaaaaaattaaacgacgaacatcttccacaaaaccacactctgacacacata 39297722  T
Q  128 a 128  Q
    |    
T  39297721 a 39297721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 35029267 - 35029319
Alignment:
Q  195 caacctccaagcaaaaatagacaccttgaggggaacatgtttgtgccaaacca 247  Q
    ||||||||||||||||||||| ||||| || ||||||||||| ||||||||||    
T  35029267 caacctccaagcaaaaatagaaaccttaagtggaacatgtttatgccaaacca 35029319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 5802210 - 5802160
Alignment:
Q  195 caacctccaagcaaaaatagacaccttgaggggaacatgtttgtgccaaac 245  Q
    |||||||||||||||||| || ||||| || ||||||||||| ||||||||    
T  5802210 caacctccaagcaaaaattgagaccttaagtggaacatgtttatgccaaac 5802160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 12331901 - 12331951
Alignment:
Q  195 caacctccaagcaaaaatagacaccttgaggggaacatgtttgtgccaaac 245  Q
    ||||| |||||||||||| || ||||| || ||||||||||||||||||||    
T  12331901 caaccaccaagcaaaaattgagaccttaagtggaacatgtttgtgccaaac 12331951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 30426484 - 30426534
Alignment:
Q  195 caacctccaagcaaaaatagacaccttgaggggaacatgtttgtgccaaac 245  Q
    |||||||||||||||||| || ||||| || ||||||||||| ||||||||    
T  30426484 caacctccaagcaaaaattgagaccttaagtggaacatgtttatgccaaac 30426534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 30 - 248
Target Start/End: Complemental strand, 13252 - 13034
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    ||||||||| ||||||||  ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||  |||||||| |||| |||||||||     
T  13252 tatccaagatctcaccaatgaccataaagaatcaaagaagctgcaagacaaaaataaatgtcgagcatcttccaaaaaaccacaccctgacacacataaa 13153  T
Q  130 catgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 229  Q
    |||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||| ||||| ||||| |    
T  13152 catgcctctgtattcaaaataccacgatatgctaaattagactttgtaggaagtctatctcgaatcaatctccaagcgaaaatagagaccttaaggggga 13053  T
Q  230 catgtttgtgccaaaccaa 248  Q
    | |||||||||||||||||    
T  13052 cctgtttgtgccaaaccaa 13034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 1e-71; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 30 - 254
Target Start/End: Original strand, 35837089 - 35837313
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    |||||||||||||||||||  |||||| |||||||||||  |||| |||||||| |||||  | ||||||||||| | |||||| |||| ||||||||||    
T  35837089 tatccaagacctcaccaaaggccataatgaaccaaagaatttgcaggacaaaaagaaatggtgagcatcttccacaagaccacaccctgacacacataag 35837188  T
Q  130 catgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 229  Q
    || |||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||| || ||||    
T  35837189 cacgcctctgaatccaagataccacgatatgctaaattagactttgtaggaagtcgatcgcgaatcaacctccaagcaaaaatagacaccttaagcggaa 35837288  T
Q  230 catgtttgtgccaaaccaattcatc 254  Q
    | |||||||||||||||||||||||    
T  35837289 cctgtttgtgccaaaccaattcatc 35837313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 30 - 251
Target Start/End: Original strand, 36255659 - 36255880
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    ||||||||| |||| |||  ||||||||| |||||||||  |||| ||||||||||||||||| || |||| ||  |||||||| |||| |||||||||     
T  36255659 tatccaagatctcatcaacgaccataaagtaccaaagaagttgcaggacaaaaataaatgtcgagcgtctttcaaaaaaccacaccctgacacacataaa 36255758  T
Q  130 catgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 229  Q
    || |||||||||||||| || ||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  36255759 caagcctctgaattcaaaatcccacgatatgctaaattagactttgtagggagtctatctcgaatcaatctccaagcaaaaatagacaccttaaggggaa 36255858  T
Q  230 catgtttgtgccaaaccaattc 251  Q
    | ||||||||||||||||||||    
T  36255859 cctgtttgtgccaaaccaattc 36255880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 25671997 - 25672050
Alignment:
Q  195 caacctccaagcaaaaatagacaccttgaggggaacatgtttgtgccaaaccaa 248  Q
    ||||||||||||||||||||| ||||| || | |||||| ||||||||||||||    
T  25671997 caacctccaagcaaaaatagagaccttaagcgtaacatggttgtgccaaaccaa 25672050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 30 - 248
Target Start/End: Complemental strand, 45165819 - 45165601
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    |||||| || ||||||||  ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||  |||||||| |||  |||||||||     
T  45165819 tatccaggatctcaccaacgaccataaagaagcaaagaagctgcaagacaaaaataaatgtcgagcatcttccaataaaccacaccctaacacacataaa 45165720  T
Q  130 catgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 229  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  45165719 catgcctctgaattcaaaatatcacgatatgctaaattagactttgtaggaagtctatctcgaatcaatctccaagcaaaaataaacaccttaaggggaa 45165620  T
Q  230 catgtttgtgccaaaccaa 248  Q
    | | |||||||||||||||    
T  45165619 cctctttgtgccaaaccaa 45165601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 30 - 248
Target Start/End: Original strand, 39694351 - 39694569
Alignment:
Q  30 tatccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataag 129  Q
    ||||||||| |||||||    ||||||  ||||||| || ||||||||||||||||||||||| || |||||||  |||||||| |||| |||||||||     
T  39694351 tatccaagatctcaccagcggccataataaaccaaaaaatctgcaagacaaaaataaatgtcgagcgtcttccaataaaccacaccctgacacacataaa 39694450  T
Q  130 catgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaa 229  Q
    |||||||||||| |||| ||||||||  | |||||||| ||| | ||||| ||||| ||||||||||| ||||||||||||||||||||||| || ||||    
T  39694451 catgcctctgaactcaaaataccacgggaagctaaattggacttggtagggagtctgtctcgaatcaatctccaagcaaaaatagacaccttaagaggaa 39694550  T
Q  230 catgtttgtgccaaaccaa 248  Q
    | |||||||||||||||||    
T  39694551 cctgtttgtgccaaaccaa 39694569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 248
Target Start/End: Complemental strand, 6343899 - 6343682
Alignment:
Q  31 atccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataagc 130  Q
    |||||||||||||| |||  |||||||| ||||||| | |||||||||||||||| |||||||||||||||||  || ||||| ||||  |||||||| |    
T  6343899 atccaagacctcactaaaggccataaagtaccaaagtagctgcaagacaaaaatagatgtcgtgcatcttccatcaagccacaccctgatacacataaac 6343800  T
Q  131 atgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaac 230  Q
    |  |||   ||| ||| |||||||    |||||| |||||| | || ||||||| ||| |||| ||||| ||||||||||||||||||||| |  |||||    
T  6343799 acacctgaaaatccaaaataccacaggttgctaagttagacttagtgggaagtcgatcacgaagcaaccgccaagcaaaaatagacaccttaatcggaac 6343700  T
Q  231 atgtttgtgccaaaccaa 248  Q
    ||| || |||||||||||    
T  6343699 atgcttatgccaaaccaa 6343682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 254
Target Start/End: Complemental strand, 30713138 - 30712915
Alignment:
Q  31 atccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataagc 130  Q
    |||||||||||||| |||  |||||||||||||||| | |||||||||| ||||| |||  ||||||||||||  |  ||||| |||| ||||||||| |    
T  30713138 atccaagacctcactaaaggccataaagaaccaaagcatctgcaagacagaaatatatggtgtgcatcttccaacagtccacaacctgacacacataaac 30713039  T
Q  131 atgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaac 230  Q
    | |||| | ||| |||||||||||    | |||| |||||| | || ||||||| ||| |||| ||||| |||||| |||||||||||||| || |||||    
T  30713038 acgcctgtaaatccaagataccacaggttactaagttagacttagtgggaagtcgatcacgaagcaaccgccaagcgaaaatagacaccttaagcggaac 30712939  T
Q  231 atgtttgtgccaaaccaattcatc 254  Q
    ||| || ||||||||||| |||||    
T  30712938 atgcttatgccaaaccaaatcatc 30712915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 45270286 - 45270339
Alignment:
Q  195 caacctccaagcaaaaatagacaccttgaggggaacatgtttgtgccaaaccaa 248  Q
    ||||||||||||||||||||| ||||| || |||||||| ||||||||||||||    
T  45270286 caacctccaagcaaaaatagagaccttaagcggaacatggttgtgccaaaccaa 45270339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 41150059 - 41150108
Alignment:
Q  195 caacctccaagcaaaaatagacaccttgaggggaacatgtttgtgccaaa 244  Q
    ||||||||||||||||||||| ||||| || |||||||| ||||||||||    
T  41150059 caacctccaagcaaaaatagagaccttaagcggaacatggttgtgccaaa 41150108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 248
Target Start/End: Original strand, 15602205 - 15602422
Alignment:
Q  31 atccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataagc 130  Q
    |||||||||||||| |||  |||||||||||||||| | |||||||||||||||| |||||||||||||||||  |  || || ||||  |||||||| |    
T  15602205 atccaagacctcactaaaggccataaagaaccaaagtagctgcaagacaaaaatagatgtcgtgcatcttccaacatgccgcaacctgatacacataaac 15602304  T
Q  131 atgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtctatctcgaatcaacctccaagcaaaaatagacaccttgaggggaac 230  Q
    | ||||   ||| ||| ||||||||   |||||| |||||| | || |||| || ||| |||| ||||| ||||||||||||||||||||| |  |||||    
T  15602305 acgcctgaaaatccaaaataccacgggttgctaagttagacttagtgggaaatcgatcacgaagcaaccgccaagcaaaaatagacaccttaatcggaac 15602404  T
Q  231 atgtttgtgccaaaccaa 248  Q
    ||| || |||||||||||    
T  15602405 atggttatgccaaaccaa 15602422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 31 - 184
Target Start/End: Complemental strand, 28633512 - 28633359
Alignment:
Q  31 atccaagacctcaccaaaaaccataaagaaccaaagaaactgcaagacaaaaataaatgtcgtgcatcttccacgaaaccacatcctgtcacacataagc 130  Q
    |||||||||||||| |||  ||||||||| |||||| | |||||||||||||||||||| || |||||||||| || |||||| |||| |||||| ||||    
T  28633512 atccaagacctcactaaaggccataaagagccaaagcatctgcaagacaaaaataaatggcgcgcatcttccaagagaccacaacctgacacacacaagc 28633413  T
Q  131 atgcctctgaattcaagataccacgatatgctaaattagacattgtaggaagtc 184  Q
    | ||||  | || |||||||||||| | ||||||||||||| | || |||||||    
T  28633412 acgcctgagcatccaagataccacggtttgctaaattagacttagtgggaagtc 28633359  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 34434309 - 34434362
Alignment:
Q  195 caacctccaagcaaaaatagacaccttgaggggaacatgtttgtgccaaaccaa 248  Q
    ||||||||||||||||||||| || || || |||||||| || |||||||||||    
T  34434309 caacctccaagcaaaaatagagactttaagcggaacatggttatgccaaaccaa 34434362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 244
Target Start/End: Complemental strand, 87290 - 87248
Alignment:
Q  202 caagcaaaaatagacaccttgaggggaacatgtttgtgccaaa 244  Q
    |||||||||||||||||||| || ||||| |||||||||||||    
T  87290 caagcaaaaatagacaccttaagcggaacctgtttgtgccaaa 87248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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