View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0899_low_6 (Length: 452)

Name: NF0899_low_6
Description: NF0899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0899_low_6
NF0899_low_6
[»] chr8 (22 HSPs)
chr8 (1-452)||(26813762-26814212)
chr8 (262-322)||(14482125-14482184)
chr8 (262-322)||(39392749-39392808)
chr8 (263-322)||(29699178-29699236)
chr8 (267-317)||(11188248-11188297)
chr8 (262-323)||(14247317-14247379)
chr8 (261-305)||(1433467-1433511)
chr8 (262-322)||(40728506-40728565)
chr8 (266-305)||(8536152-8536191)
chr8 (262-305)||(31884517-31884560)
chr8 (263-322)||(34563174-34563232)
chr8 (262-317)||(40280298-40280352)
chr8 (263-314)||(43704480-43704530)
chr8 (263-305)||(8629033-8629075)
chr8 (271-317)||(26499648-26499694)
chr8 (263-317)||(35298571-35298624)
chr8 (263-300)||(29170049-29170086)
chr8 (269-322)||(38036200-38036252)
chr8 (264-304)||(5290566-5290606)
chr8 (261-317)||(18356241-18356296)
chr8 (251-303)||(26716542-26716594)
chr8 (269-317)||(42597331-42597378)
[»] chr2 (29 HSPs)
chr2 (252-314)||(10143085-10143146)
chr2 (263-322)||(18884805-18884864)
chr2 (261-322)||(37053516-37053576)
chr2 (262-322)||(28803594-28803653)
chr2 (262-326)||(33197323-33197386)
chr2 (263-317)||(10190203-10190256)
chr2 (263-317)||(33267609-33267662)
chr2 (251-317)||(34339035-34339100)
chr2 (251-305)||(42974264-42974318)
chr2 (263-304)||(2400080-2400121)
chr2 (261-322)||(17952789-17952849)
chr2 (262-322)||(35809856-35809914)
chr2 (262-322)||(9478222-9478281)
chr2 (262-322)||(37033967-37034026)
chr2 (266-305)||(3673734-3673773)
chr2 (261-316)||(10150677-10150731)
chr2 (263-322)||(43199167-43199225)
chr2 (271-305)||(26522728-26522762)
chr2 (264-322)||(31461363-31461420)
chr2 (270-303)||(938613-938646)
chr2 (251-288)||(9404512-9404549)
chr2 (261-322)||(27288555-27288615)
chr2 (262-326)||(1493597-1493660)
chr2 (273-317)||(12215741-12215784)
chr2 (269-301)||(14278002-14278034)
chr2 (270-322)||(25609727-25609778)
chr2 (263-323)||(35329906-35329965)
chr2 (273-322)||(35539654-35539705)
chr2 (270-317)||(44600470-44600518)
[»] scaffold0654 (1 HSPs)
scaffold0654 (261-306)||(6740-6785)
[»] scaffold0014 (1 HSPs)
scaffold0014 (261-306)||(116659-116704)
[»] chr4 (28 HSPs)
chr4 (257-317)||(15511427-15511487)
chr4 (261-317)||(44319872-44319926)
chr4 (261-322)||(54325125-54325185)
chr4 (262-317)||(11389448-11389503)
chr4 (262-322)||(19422341-19422400)
chr4 (261-317)||(30207663-30207718)
chr4 (263-306)||(2980574-2980617)
chr4 (251-302)||(3891489-3891540)
chr4 (263-305)||(4191663-4191705)
chr4 (263-317)||(30024624-30024677)
chr4 (263-304)||(4663801-4663842)
chr4 (261-314)||(47970240-47970292)
chr4 (268-316)||(28623218-28623265)
chr4 (261-305)||(41050618-41050662)
chr4 (262-314)||(45128406-45128457)
chr4 (271-322)||(21593099-21593149)
chr4 (262-317)||(32066502-32066556)
chr4 (263-322)||(36734817-36734875)
chr4 (263-317)||(4471095-4471148)
chr4 (264-322)||(18630605-18630662)
chr4 (263-317)||(51555960-51556013)
chr4 (262-315)||(2169951-2170003)
chr4 (264-317)||(8422930-8422982)
chr4 (264-321)||(11264226-11264282)
chr4 (268-305)||(24936239-24936276)
chr4 (262-299)||(27321941-27321978)
chr4 (261-317)||(25487638-25487693)
chr4 (262-322)||(49219062-49219121)
[»] chr3 (29 HSPs)
chr3 (263-319)||(16790179-16790234)
chr3 (261-317)||(22214774-22214829)
chr3 (261-317)||(39971241-39971296)
chr3 (262-322)||(41028939-41028998)
chr3 (261-304)||(3015953-3015996)
chr3 (266-304)||(24158607-24158645)
chr3 (253-305)||(26878028-26878083)
chr3 (268-316)||(20173982-20174029)
chr3 (262-322)||(41159032-41159091)
chr3 (262-322)||(44374732-44374791)
chr3 (263-322)||(16790444-16790502)
chr3 (279-322)||(30666291-30666334)
chr3 (262-317)||(48528501-48528555)
chr3 (263-322)||(54775052-54775110)
chr3 (264-322)||(905058-905115)
chr3 (263-305)||(24268259-24268301)
chr3 (263-305)||(28283681-28283723)
chr3 (252-322)||(38462194-38462263)
chr3 (251-305)||(48597693-48597747)
chr3 (263-316)||(27792796-27792848)
chr3 (263-304)||(31010345-31010386)
chr3 (261-322)||(32064362-32064422)
chr3 (261-314)||(33081249-33081301)
chr3 (280-317)||(33882969-33883005)
chr3 (262-327)||(50016041-50016105)
chr3 (262-322)||(3182450-3182509)
chr3 (263-303)||(27291005-27291045)
chr3 (261-305)||(33307684-33307728)
chr3 (261-305)||(43875398-43875442)
[»] chr6 (35 HSPs)
chr6 (251-306)||(5884961-5885016)
chr6 (273-317)||(507154-507197)
chr6 (263-305)||(31668789-31668831)
chr6 (262-316)||(33068655-33068708)
chr6 (265-306)||(6647315-6647356)
chr6 (262-323)||(13360658-13360718)
chr6 (262-322)||(2514625-2514684)
chr6 (261-305)||(3169349-3169393)
chr6 (263-322)||(5637313-5637373)
chr6 (261-317)||(8349757-8349812)
chr6 (262-322)||(24774681-24774740)
chr6 (262-322)||(29269819-29269878)
chr6 (263-322)||(5328898-5328956)
chr6 (262-305)||(29249397-29249440)
chr6 (263-322)||(31670963-31671021)
chr6 (263-305)||(4247738-4247780)
chr6 (264-314)||(5554861-5554910)
chr6 (258-312)||(8147442-8147496)
chr6 (264-322)||(10452448-10452505)
chr6 (268-322)||(24836287-24836340)
chr6 (264-317)||(1810393-1810445)
chr6 (271-323)||(2456884-2456934)
chr6 (263-300)||(4325417-4325454)
chr6 (263-316)||(27889937-27889989)
chr6 (263-322)||(740953-741014)
chr6 (266-322)||(4248885-4248940)
chr6 (268-304)||(6654544-6654580)
chr6 (263-303)||(8010281-8010321)
chr6 (262-322)||(8420285-8420344)
chr6 (262-322)||(28531629-28531688)
chr6 (261-317)||(28660180-28660235)
chr6 (262-322)||(29274317-29274376)
chr6 (269-305)||(31461608-31461644)
chr6 (268-300)||(32843424-32843456)
chr6 (266-322)||(32975905-32975960)
[»] chr1 (26 HSPs)
chr1 (270-321)||(45769832-45769882)
chr1 (262-314)||(870968-871019)
chr1 (262-322)||(48282056-48282116)
chr1 (261-317)||(49557063-49557118)
chr1 (263-314)||(6659627-6659677)
chr1 (262-317)||(16982029-16982083)
chr1 (263-305)||(4202233-4202275)
chr1 (261-326)||(4200151-4200215)
chr1 (262-322)||(23895259-23895318)
chr1 (261-317)||(41638403-41638458)
chr1 (266-305)||(13037791-13037830)
chr1 (266-305)||(17269177-17269216)
chr1 (268-322)||(4548649-4548703)
chr1 (264-322)||(36641800-36641857)
chr1 (263-317)||(37591356-37591409)
chr1 (261-303)||(37818386-37818428)
chr1 (265-323)||(42336588-42336645)
chr1 (260-322)||(46499942-46500003)
chr1 (269-306)||(6981422-6981459)
chr1 (261-322)||(16980748-16980808)
chr1 (272-305)||(24146363-24146396)
chr1 (265-302)||(24857621-24857658)
chr1 (277-326)||(50319230-50319278)
chr1 (262-322)||(7274027-7274086)
chr1 (261-305)||(29046017-29046061)
chr1 (262-306)||(49125757-49125801)
[»] scaffold0590 (1 HSPs)
scaffold0590 (264-322)||(1162-1219)
[»] scaffold0275 (1 HSPs)
scaffold0275 (264-322)||(2756-2813)
[»] scaffold0508 (1 HSPs)
scaffold0508 (262-306)||(9878-9922)
[»] scaffold0100 (1 HSPs)
scaffold0100 (263-315)||(42541-42592)
[»] scaffold0024 (1 HSPs)
scaffold0024 (262-322)||(27499-27558)
[»] chr5 (28 HSPs)
chr5 (262-322)||(20982223-20982282)
chr5 (262-322)||(35095871-35095930)
chr5 (266-322)||(37063162-37063217)
chr5 (262-317)||(26516221-26516275)
chr5 (257-304)||(40499780-40499827)
chr5 (263-317)||(13224353-13224406)
chr5 (265-322)||(7096215-7096271)
chr5 (251-316)||(10391265-10391329)
chr5 (263-316)||(19113211-19113263)
chr5 (265-305)||(18704139-18704179)
chr5 (262-326)||(32172576-32172639)
chr5 (262-322)||(35135750-35135809)
chr5 (263-315)||(40097498-40097549)
chr5 (261-304)||(11095574-11095617)
chr5 (263-302)||(19177403-19177442)
chr5 (270-317)||(40048373-40048419)
chr5 (264-322)||(28586854-28586911)
chr5 (251-305)||(29588792-29588846)
chr5 (263-305)||(35963172-35963214)
chr5 (262-303)||(3951540-3951581)
chr5 (277-322)||(3970768-3970813)
chr5 (251-296)||(27104527-27104572)
chr5 (252-317)||(27106016-27106080)
chr5 (267-316)||(34117627-34117675)
chr5 (262-322)||(29117018-29117077)
chr5 (271-315)||(29802688-29802732)
chr5 (261-305)||(36638668-36638712)
chr5 (261-305)||(38819679-38819723)
[»] chr7 (27 HSPs)
chr7 (263-317)||(991994-992047)
chr7 (261-315)||(6552365-6552418)
chr7 (263-305)||(47006972-47007014)
chr7 (265-322)||(24973870-24973926)
chr7 (264-305)||(27492720-27492761)
chr7 (262-322)||(25511550-25511609)
chr7 (262-322)||(33709370-33709430)
chr7 (262-306)||(39630544-39630588)
chr7 (262-322)||(49060463-49060522)
chr7 (263-314)||(2013123-2013173)
chr7 (262-317)||(5373148-5373202)
chr7 (263-322)||(7244626-7244684)
chr7 (262-317)||(24975827-24975881)
chr7 (265-316)||(33894549-33894599)
chr7 (262-317)||(44241783-44241837)
chr7 (263-306)||(45078217-45078260)
chr7 (264-322)||(30496629-30496686)
chr7 (261-314)||(3610836-3610888)
chr7 (264-305)||(46213728-46213769)
chr7 (265-306)||(47559711-47559752)
chr7 (262-322)||(1431396-1431455)
chr7 (277-317)||(1432060-1432099)
chr7 (270-322)||(5269461-5269512)
chr7 (261-305)||(22388008-22388052)
chr7 (252-300)||(23721414-23721462)
chr7 (262-322)||(31341117-31341176)
chr7 (262-322)||(35536030-35536089)
[»] scaffold0004 (1 HSPs)
scaffold0004 (263-300)||(98752-98789)
[»] scaffold0110 (1 HSPs)
scaffold0110 (266-322)||(4311-4367)
[»] scaffold0019 (1 HSPs)
scaffold0019 (276-316)||(104228-104267)


Alignment Details
Target: chr8 (Bit Score: 420; Significance: 0; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 420; E-Value: 0
Query Start/End: Original strand, 1 - 452
Target Start/End: Complemental strand, 26814212 - 26813762
Alignment:
Q  1 actctttaacacactccctaatggaatatctgaatattgcagccttttgtcacaatgatacctctcttcttaggatctggtactcaaccacgtctacctt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26814212 actctttaacacactccctaatggaatatctgaatattgcagccttttgtcacaatgatacctctcttcttaggatctggtactcaaccacgtctacctt 26814113  T
Q  101 tctatttttacggaacaaaaaattatgagcaaaatcaataatttttccgcagtgattttgggtagttttggtaaaattaacggggaaataagagaatgtg 200  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  26814112 tctaattttacggaacaaaaaattatgagcaaaatcaataatttttccgcagtgattttgggtagttttggtagaattaaaggg-aaataagagaatgtg 26814014  T
Q  201 ggatgtcaacaaaaacatgcactatttagataaacaattcaattaagtgctagcacaaaaacttatcatataagtgcttatgtataaattatttctataa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26814013 ggatgtcaacaaaaacatgcactatttagataaacaattcaattaagtgctagcacaaaaacttatcatataagtgcttatgtataaattatttctataa 26813914  T
Q  301 caaaaagataaaataaactcaagttggattggaggcgtatttggtgtccgtctgtcggcaaatgtgattacatttaatcacctctattttatagctgata 400  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26813913 caaaaagataaaataaacacaagttggattgaaggcgtatttggtgtccgtctgtcggcacatgtgattacatttaatcacctctattttatagctgata 26813814  T
Q  401 taaacaaaccaatcacaatggatagaaagtttttcacttactataagctgtt 452  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26813813 taaacaaaccaatcacaatggatagaaagtttttcacttactataagctgtt 26813762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 14482125 - 14482184
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||    
T  14482125 cttatcatataagtgcttatgtataaactatttctataac-aaaagataaaataaagtcaa 14482184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 39392808 - 39392749
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||||||||  |||||||||| |||||||||||| ||||||||||||||| ||||    
T  39392808 cttatcatataagtggctatgtataaactatttctataac-aaaagataaaataaagtcaa 39392749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 29699178 - 29699236
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||| |||||||||| || ||||||||||||| ||||||||||||||| ||||    
T  29699178 ttatcatataaatgcttatgtacaagttatttctataac-aaaagataaaataaagtcaa 29699236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 317
Target Start/End: Complemental strand, 11188297 - 11188248
Alignment:
Q  267 catataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    ||||||||||||||||||||| || |||||||||| |||||||||||||||    
T  11188297 catataagtgcttatgtataagttgtttctataac-aaaagataaaataaa 11188248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 323
Target Start/End: Complemental strand, 14247379 - 14247317
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctat-aacaaaaagataaaataaactcaag 323  Q
    ||||||||||||||||||||||||||| | ||| ||| || |||||||||||||||| |||||    
T  14247379 cttatcatataagtgcttatgtataaactgtttttataaaaaaaaagataaaataaagtcaag 14247317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 1433467 - 1433511
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    |||||||||||||||| |||||||||| |||||||||||| ||||    
T  1433467 acttatcatataagtggttatgtataagttatttctataataaaa 1433511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 40728565 - 40728506
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||||| | ||| |||| ||||||||||||| ||||||||||||||| ||||    
T  40728565 cttatcatataagtgttcatgcataagttatttctataac-aaaagataaaataaagtcaa 40728506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 305
Target Start/End: Complemental strand, 8536191 - 8536152
Alignment:
Q  266 tcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  8536191 tcatataagtgcttatgtataagctatttctataacaaaa 8536152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 31884517 - 31884560
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||    
T  31884517 cttatcatacaagtgcatatgtataagttatttctataacaaaa 31884560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 34563174 - 34563232
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||||||||| ||||| |||||||||| || ||| ||||||||||| ||||    
T  34563174 ttatcatataagtgcttatatataagttatttctatgac-aaaggataaaataaagtcaa 34563232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 40280352 - 40280298
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||||||||||||||| ||| ||||| ||||||||| ||| |||||||||||||||    
T  40280352 cttatcatataagtgcctatatataagttatttctacaac-aaaagataaaataaa 40280298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 314
Target Start/End: Complemental strand, 43704530 - 43704480
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaat 314  Q
    |||||||||||||| | |||||||||||  ||||||||||||||||||||||    
T  43704530 ttatcatataagtgat-atgtataaatttcttctataacaaaaagataaaat 43704480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 305
Target Start/End: Original strand, 8629033 - 8629075
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    ||||||||||||||||||| |||||  ||||||||||||||||    
T  8629033 ttatcatataagtgcttatttataagctatttctataacaaaa 8629075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 317
Target Start/End: Original strand, 26499648 - 26499694
Alignment:
Q  271 taagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||||| ||||||| || |||||||| ||||||||||||||||||||    
T  26499648 taagtgtttatgtaaaagttatttctttaacaaaaagataaaataaa 26499694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 35298624 - 35298571
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||||||||||||||||||||||||  ||||||  |||| |||||||||||||||    
T  35298624 ttatcatataagtgcttatgtataagctatttcagtaac-aaaagataaaataaa 35298571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 29170086 - 29170049
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataa 300  Q
    ||||||||||||||||||||||||| || |||||||||    
T  29170086 ttatcatataagtgcttatgtataagttctttctataa 29170049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 38036252 - 38036200
Alignment:
Q  269 tataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||||||||||||| ||||| | ||||||||| |||||||||| ||||    
T  38036252 tataagtgcttatgtataaactatttatttaacaaaaa-ataaaataaattcaa 38036200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 304
Target Start/End: Original strand, 5290566 - 5290606
Alignment:
Q  264 tatcatataagtgcttatgtataaattatttctataacaaa 304  Q
    ||||||| ||||||||||||||||  |||||||||||||||    
T  5290566 tatcatacaagtgcttatgtataagctatttctataacaaa 5290606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 18356241 - 18356296
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    ||||||||||||| ||||||||| ||| || |||||||| | |||||||||||||||    
T  18356241 acttatcatataattgcttatgtgtaagttgtttctatagc-aaaagataaaataaa 18356296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 26716594 - 26716542
Alignment:
Q  251 tagcacaaaaacttatcatataagtgcttatgtataaattatttctataacaa 303  Q
    ||||| ||| |||||| ||||||||||||||||||||  || |||||||||||    
T  26716594 tagcataaacacttattatataagtgcttatgtataagctacttctataacaa 26716542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 317
Target Start/End: Original strand, 42597331 - 42597378
Alignment:
Q  269 tataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    ||||||| |||||||||||  |||||||||||| |||||||||||||||    
T  42597331 tataagtacttatgtataagctatttctataac-aaaagataaaataaa 42597378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 252 - 314
Target Start/End: Original strand, 10143085 - 10143146
Alignment:
Q  252 agcacaaaaacttatcatataagtgcttatgtataaattatttctataacaaaaagataaaat 314  Q
    ||||||||||||||||  |||||||||||||||||| ||||||||||||| ||||||||||||    
T  10143085 agcacaaaaacttatcgaataagtgcttatgtataagttatttctataac-aaaagataaaat 10143146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 18884805 - 18884864
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||||||||| |||||||| |||||||||||| ||||| |||||||||| ||||    
T  18884805 ttatcatataagtgctcatgtataagttatttctataaaaaaaatataaaataaaatcaa 18884864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 37053516 - 37053576
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||||||||||||||||||| | ||||||||||||| ||| |||||||||| ||||    
T  37053516 acttatcatataagtgcttatgtatagactatttctataacagaaa-ataaaataaagtcaa 37053576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 28803653 - 28803594
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||||||||||||| ||||| ||||||| ||||| ||||||||||||||| ||||    
T  28803653 cttatcatataagtgcttatatataagttatttcgataac-aaaagataaaataaagtcaa 28803594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 326
Target Start/End: Complemental strand, 33197386 - 33197323
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaagttg 326  Q
    |||||||||||||||||||| |||||  |||||||||||| |||||||| |||||| ||||||||    
T  33197386 cttatcatataagtgcttatctataagctatttctataac-aaaagatagaataaagtcaagttg 33197323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 10190203 - 10190256
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||||||||||||||||||||||||| ||||| |||||| ||| |||||||||||    
T  10190203 ttatcatataagtgcttatgtataaactatttttataac-aaaggataaaataaa 10190256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 33267662 - 33267609
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||||||||||||||||||||||||  ||||||||||||||| || |||||||||    
T  33267662 ttatcatataagtgcttatgtataatctatttctataacaaacag-taaaataaa 33267609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 34339035 - 34339100
Alignment:
Q  251 tagcacaaaaacttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    ||||| ||| |||||||||||||||||||||||||||| | |||||||| |  ||||||||||||||    
T  34339035 tagcataaacacttatcatataagtgcttatgtataaactttttctatagc-taaagataaaataaa 34339100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 42974264 - 42974318
Alignment:
Q  251 tagcacaaaaacttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    ||||| ||| ||||||||||| ||||||| |||||||| ||||||||||||||||    
T  42974264 tagcataaacacttatcatattagtgcttgtgtataaactatttctataacaaaa 42974318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 2400080 - 2400121
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaa 304  Q
    ||||||||||||||||||||||||| || |||||||||||||    
T  2400080 ttatcatataagtgcttatgtataagttgtttctataacaaa 2400121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 17952849 - 17952789
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||||||| |||||| |||||  |||||||||||| ||||||||||||||| ||||    
T  17952849 acttatcatataagagcttatatataagctatttctataac-aaaagataaaataaagtcaa 17952789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 35809856 - 35809914
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||||||||||||||||||| ||||||| || ||  |||||||||||||| ||||    
T  35809856 cttatcatataagtgcttatgtataagttatttccatgac--aaagataaaataaaatcaa 35809914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 9478222 - 9478281
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||||| ||||||||||  |||||||||||| |  |||||||||||||||||    
T  9478222 cttatcatataagtgtttatgtataagctatttctataac-agtagataaaataaactcaa 9478281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 37033967 - 37034026
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||| | | |||||||||||| ||||||||||| |||||||||||||||| ||||    
T  37033967 cttatcatatgaatacttatgtataaactatttctataa-aaaaagataaaataaagtcaa 37034026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 305
Target Start/End: Original strand, 3673734 - 3673773
Alignment:
Q  266 tcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  3673734 tcatataagtgcttatgtattagttatttctataacaaaa 3673773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 10150677 - 10150731
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataa 316  Q
    |||||| ||||||||| |||||||||| ||||||||||||  ||||||||||||||    
T  10150677 acttattatataagtgtttatgtataagttatttctataa-taaaagataaaataa 10150731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 43199167 - 43199225
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||||||||| | || |||||||||| |||||| ||||||||||||||| ||||    
T  43199167 ttatcatataagtgctaacgtttaaattatttatataac-aaaagataaaataaagtcaa 43199225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 305
Target Start/End: Complemental strand, 26522762 - 26522728
Alignment:
Q  271 taagtgcttatgtataaattatttctataacaaaa 305  Q
    |||||||||||||||||| ||||||||||||||||    
T  26522762 taagtgcttatgtataaactatttctataacaaaa 26522728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 31461363 - 31461420
Alignment:
Q  264 tatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||| |||| |||||  |||||||||||| ||||||||||||||| ||||    
T  31461363 tatcatataagtggttatatataagctatttctataac-aaaagataaaataaagtcaa 31461420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 303
Target Start/End: Complemental strand, 938646 - 938613
Alignment:
Q  270 ataagtgcttatgtataaattatttctataacaa 303  Q
    ||||||||||||||||||||| ||||||||||||    
T  938646 ataagtgcttatgtataaattgtttctataacaa 938613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 288
Target Start/End: Original strand, 9404512 - 9404549
Alignment:
Q  251 tagcacaaaaacttatcatataagtgcttatgtataaa 288  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  9404512 tagcataaacacttatcatataagtgcttatgtataaa 9404549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 27288555 - 27288615
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||| |||||||||||||||| || || |||||||||  ||||||||||||||| ||||    
T  27288555 acttatcctataagtgcttatgtaaaagttgtttctataa-taaaagataaaataaaatcaa 27288615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 326
Target Start/End: Complemental strand, 1493660 - 1493597
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaagttg 326  Q
    |||||||||||| ||||||| |||||| | |||||||||| || |||||||||||| || |||||    
T  1493660 cttatcatataattgcttatttataaactctttctataac-aatagataaaataaagtctagttg 1493597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 12215741 - 12215784
Alignment:
Q  273 agtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||||||||||||||| |||||||| ||| |||||||||||||||    
T  12215741 agtgcttatgtataaactatttctacaac-aaaagataaaataaa 12215784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 301
Target Start/End: Complemental strand, 14278034 - 14278002
Alignment:
Q  269 tataagtgcttatgtataaattatttctataac 301  Q
    |||||||||||||||||||| ||||||||||||    
T  14278034 tataagtgcttatgtataaactatttctataac 14278002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 25609727 - 25609778
Alignment:
Q  270 ataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||||||||  |||||||||||  ||||||||||||||| ||||    
T  25609727 ataagtgcttatgtataagctatttctataa-gaaaagataaaataaagtcaa 25609778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 323
Target Start/End: Complemental strand, 35329965 - 35329906
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaag 323  Q
    |||||||||||||| ||||| ||||| |||||| ||||| | ||||||||||||| |||||    
T  35329965 ttatcatataagtgtttatgcataaactatttccataac-ataagataaaataaagtcaag 35329906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 35539654 - 35539705
Alignment:
Q  273 agtgcttatgtataaattatttctataaca--aaaagataaaataaactcaa 322  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||| ||||    
T  35539654 agtgcttatgtataaattatttcgatagcaggaaaagataaaataaaatcaa 35539705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 44600470 - 44600518
Alignment:
Q  270 ataagtgcttatgtataaattatttctata-acaaaaagataaaataaa 317  Q
    ||||||||||||||||||  ||||||||||  |||||||||||||||||    
T  44600470 ataagtgcttatgtataagctatttctatagccaaaaagataaaataaa 44600518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 306
Target Start/End: Complemental strand, 6785 - 6740
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaa 306  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  6785 acttatcatataagtgcttatgtataaactatttctataacaaaaa 6740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 306
Target Start/End: Complemental strand, 116704 - 116659
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaa 306  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  116704 acttatcatataagtgcttatgtataaactatttctataacaaaaa 116659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 15511487 - 15511427
Alignment:
Q  257 aaaaacttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||| |||||||| ||||||||||||||||| |||||| |||||||| |||||||||||||    
T  15511487 aaaagcttatcatgtaagtgcttatgtataagttatttttataacaagaagataaaataaa 15511427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 44319872 - 44319926
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||||||||||||||||| ||||||||| ||||||||||  ||||||||||||||||    
T  44319872 acttatcatataagtgctcatgtataaactatttctata--aaaaagataaaataaa 44319926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 54325185 - 54325125
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||||||||| |||||||| ||||||||| || ||||||||||||||| ||||    
T  54325185 acttatcatataagtgcttgtgtataaactatttctattac-aaaagataaaataaagtcaa 54325125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 11389448 - 11389503
Alignment:
Q  262 cttatcat-ataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  11389448 cttatcatgataagtgcttatgtataaattatttctataa-aaaaagataaagtaaa 11389503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 19422341 - 19422400
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||||| ||||||||||||| ||||||||||||| |||||||| |||||| ||||    
T  19422341 cttatcatataaatgcttatgtataagttatttctataac-aaaagatataataaagtcaa 19422400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 30207718 - 30207663
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    ||||||||||||||||||||||||||  ||| |||||||||||||| ||||||||||    
T  30207718 acttatcatataagtgcttatgtatatgttagttctataacaaaaa-ataaaataaa 30207663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 306
Target Start/End: Complemental strand, 2980617 - 2980574
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaa 306  Q
    |||||||||||||||||||||||||  |||||||||||||||||    
T  2980617 ttatcatataagtgcttatgtataagctatttctataacaaaaa 2980574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 302
Target Start/End: Original strand, 3891489 - 3891540
Alignment:
Q  251 tagcacaaaaacttatcatataagtgcttatgtataaattatttctataaca 302  Q
    ||||||| | |||||||||||||||||||||| ||||| |||||||||||||    
T  3891489 tagcacatacacttatcatataagtgcttatgaataaactatttctataaca 3891540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 305
Target Start/End: Original strand, 4191663 - 4191705
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  4191663 ttatcatataagtgcttatgtataagctatttctataacaaaa 4191705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 30024624 - 30024677
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    ||||||||||||| |||||| |||| ||||||||||||| |||||||||||||||    
T  30024624 ttatcatataagtacttatgcataagttatttctataac-aaaagataaaataaa 30024677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 263 - 304
Target Start/End: Complemental strand, 4663842 - 4663801
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaa 304  Q
    ||||| ||||||||||||||||||| ||||||||||||||||    
T  4663842 ttatcgtataagtgcttatgtataagttatttctataacaaa 4663801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 47970240 - 47970292
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaat 314  Q
    |||| ||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  47970240 acttgtcatataagtgcttatgtataagctatttctataac-aaaagataaaat 47970292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 316
Target Start/End: Original strand, 28623218 - 28623265
Alignment:
Q  268 atataagtgcttatgtataaattatttctataacaaaaagataaaataa 316  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  28623218 atataagtgcttatgtataagttatttatataac-aaaagataaaataa 28623265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 41050618 - 41050662
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    |||||||||||||||| | ||||||||| ||||||||||||||||    
T  41050618 acttatcatataagtgttaatgtataaactatttctataacaaaa 41050662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 45128457 - 45128406
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaat 314  Q
    |||||||||||||  |||||||||||| |||||||||||| ||||||||||||    
T  45128457 cttatcatataagaacttatgtataaactatttctataac-aaaagataaaat 45128406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 21593149 - 21593099
Alignment:
Q  271 taagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||||||||||| ||||||||||||  |||||||||||||| ||||    
T  21593149 taagtgcttatgtataaactatttctataac-taaagataaaataaagtcaa 21593099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 32066556 - 32066502
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||||| |||||||||||||||||||| || || |||||| |||||||||||||||    
T  32066556 cttatcgtataagtgcttatgtataaactacttttataac-aaaagataaaataaa 32066502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 36734817 - 36734875
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||||||||||||||||||  | |||||||||| ||||| ||||||||| ||||    
T  36734817 ttatcatataagtgcttatgtataatctctttctataac-aaaaggtaaaataaagtcaa 36734875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 4471095 - 4471148
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||| ||||||||||||||| ||||| ||||| |||||| |||||||||||||||    
T  4471095 ttattatataagtgcttatgcataaactatttttataac-aaaagataaaataaa 4471148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 18630605 - 18630662
Alignment:
Q  264 tatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||| ||||||| ||||| |||||| ||||| ||||||||||||||| ||||    
T  18630605 tatcatataagcgcttatgcataaactatttcaataac-aaaagataaaataaagtcaa 18630662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 51556013 - 51555960
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||||||||||||||||||||||||  ||||  |||||| |||||||||||||||    
T  51556013 ttatcatataagtgcttatgtataagctattattataac-aaaagataaaataaa 51555960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 2169951 - 2170003
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaata 315  Q
    |||||| || ||| ||||||||||||||| ||||||||||||||| ||||||||    
T  2169951 cttatcgtaaaagggcttatgtataaattgtttctataacaaaaa-ataaaata 2170003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 8422982 - 8422930
Alignment:
Q  264 tatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    ||||||||| ||||||||||||||  ||||| ||||| ||||||||||||||||    
T  8422982 tatcatatatgtgcttatgtataagctatttttataa-aaaaagataaaataaa 8422930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 11264226 - 11264282
Alignment:
Q  264 tatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactca 321  Q
    ||||||||||||| ||||||||||| ||||||  |||  |||||||||||||||||||    
T  11264226 tatcatataagtgattatgtataaactatttcactaa-taaaagataaaataaactca 11264282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 24936239 - 24936276
Alignment:
Q  268 atataagtgcttatgtataaattatttctataacaaaa 305  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  24936239 atataagtggttatgtataagttatttctataacaaaa 24936276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 299
Target Start/End: Complemental strand, 27321978 - 27321941
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctata 299  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  27321978 cttatcatataagtgtttatgtataagttatttctata 27321941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 25487693 - 25487638
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    ||||||| | ||| |||||||||||||  ||||||||||||||||| ||||||||||    
T  25487693 acttatcctttaaatgcttatgtataagctatttctataacaaaaa-ataaaataaa 25487638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 49219062 - 49219121
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||| |||| ||| |||||| ||||||||||||| |||| |||||||||| ||||    
T  49219062 cttatcatatgagtggttaggtataagttatttctataac-aaaatataaaataaagtcaa 49219121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 319
Target Start/End: Complemental strand, 16790234 - 16790179
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaact 319  Q
    ||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||    
T  16790234 ttatcatataagtgcttatatataagttatttctataac-aaaagataaaataaact 16790179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 22214829 - 22214774
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    ||||||| ||||||||| ||||||||||||||||||||||| ||| |||||||||||    
T  22214829 acttatcgtataagtgcgtatgtataaattatttctataac-aaaggataaaataaa 22214774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 39971241 - 39971296
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    ||||||||||||||||||||||||||| ||| || |||||| |||||||||||||||    
T  39971241 acttatcatataagtgcttatgtataagttacttatataac-aaaagataaaataaa 39971296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 41028998 - 41028939
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||| |||||||| ||||    
T  41028998 cttatcatataagtgcttatgtataagctatttctataac-aaaagaaaaaataaagtcaa 41028939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 304
Target Start/End: Complemental strand, 3015996 - 3015953
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaa 304  Q
    |||||| |||||||||||||||||| ||||||||||||||||||    
T  3015996 acttattatataagtgcttatgtattaattatttctataacaaa 3015953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 304
Target Start/End: Complemental strand, 24158645 - 24158607
Alignment:
Q  266 tcatataagtgcttatgtataaattatttctataacaaa 304  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  24158645 tcatataagtgcttatgtataagttatttctataacaaa 24158607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 305
Target Start/End: Original strand, 26878028 - 26878083
Alignment:
Q  253 gcacaaaaacttatcat---ataagtgcttatgtataaattatttctataacaaaa 305  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||||| |||||    
T  26878028 gcacaaaaacttatcatgatataagtgcttatgtataaattgtttctatagcaaaa 26878083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 316
Target Start/End: Complemental strand, 20174029 - 20173982
Alignment:
Q  268 atataagtgcttatgtataaattatttctataacaaaaagataaaataa 316  Q
    |||||||||||||||||| | ||||||||||||| ||||||||||||||    
T  20174029 atataagtgcttatgtattagttatttctataac-aaaagataaaataa 20173982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 41159032 - 41159091
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||| ||||||||||||||||||| ||||| |||||||  |||||||||||||| ||||    
T  41159032 cttatcgtataagtgcttatgtataagttattcctataac-taaagataaaataaagtcaa 41159091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 44374791 - 44374732
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||||||||||||||||  ||| ||| |||| ||||||||||||||| ||||    
T  44374791 cttatcatataagtgcttatgtataagctatatctttaac-aaaagataaaataaagtcaa 44374732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 322
Target Start/End: Complemental strand, 16790502 - 16790444
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||||||||||||||||||  ||||| |||||| || |||||||||||| ||||    
T  16790502 ttatcatataagtgcttatgtataagctatttttataac-aacagataaaataaaatcaa 16790444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 322
Target Start/End: Original strand, 30666291 - 30666334
Alignment:
Q  279 tatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||  |||||||||||||||||||||||||||| ||||    
T  30666291 tatgtataagctatttctataacaaaaagataaaataaattcaa 30666334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 48528501 - 48528555
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||||||||||||| |||||||||||  |||||||||||||| || ||||||||||    
T  48528501 cttatcatataagtacttatgtataagctatttctataacaagaa-ataaaataaa 48528555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 54775052 - 54775110
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||| ||||||||| || ||| ||||||||||||| ||||||||||||||| ||||    
T  54775052 ttatcataaaagtgcttacgtttaagttatttctataac-aaaagataaaataaagtcaa 54775110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 905115 - 905058
Alignment:
Q  264 tatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||| ||||| ||||||  |||||||||||| ||||||||||||||| ||||    
T  905115 tatcatataagcgcttaagtataagctatttctataac-aaaagataaaataaagtcaa 905058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 305
Target Start/End: Complemental strand, 24268301 - 24268259
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    |||||||| ||||||||||||||||| |||||||||| |||||    
T  24268301 ttatcatacaagtgcttatgtataaactatttctatagcaaaa 24268259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 305
Target Start/End: Complemental strand, 28283723 - 28283681
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    |||||||||||||||||||| |||| ||| |||||||||||||    
T  28283723 ttatcatataagtgcttatgcataagttacttctataacaaaa 28283681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 38462194 - 38462263
Alignment:
Q  252 agcacaaaaacttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||| ||| |||||||||||||||| |||| |||||  ||||||||| || ||||||||||||||| ||||    
T  38462194 agcataaacacttatcatataagtgtttatttataagctatttctat-accaaaagataaaataaagtcaa 38462263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 48597747 - 48597693
Alignment:
Q  251 tagcacaaaaacttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    ||||||||  |||||| || ||||||||||||| |||| ||||||||||||||||    
T  48597747 tagcacaatcacttattatgtaagtgcttatgtttaaactatttctataacaaaa 48597693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 27792796 - 27792848
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataa 316  Q
    |||||||||||||||||||||||||  |||||| | ||| ||||||||||||||    
T  27792796 ttatcatataagtgcttatgtataagctatttcaaaaac-aaaagataaaataa 27792848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 31010345 - 31010386
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaa 304  Q
    |||||||||| ||||||||| |||||||||||| ||||||||    
T  31010345 ttatcatatatgtgcttatgcataaattatttcaataacaaa 31010386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 32064362 - 32064422
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||| |||||| |||||||| || |||||| |||||||| |||||||||| ||||    
T  32064362 acttatcatattagtgctaatgtataagttctttctaaaacaaaaa-ataaaataaagtcaa 32064422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 33081301 - 33081249
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaat 314  Q
    ||||||||||| | ||||||||||| |||| |||||||||| ||||||||||||    
T  33081301 acttatcatattaatgcttatgtatgaattgtttctataac-aaaagataaaat 33081249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 317
Target Start/End: Original strand, 33882969 - 33883005
Alignment:
Q  280 atgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||||||||||||||||||||| |||||||||||||||    
T  33882969 atgtataaattatttctataac-aaaagataaaataaa 33883005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 327
Target Start/End: Complemental strand, 50016105 - 50016041
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaagttgg 327  Q
    ||||||||||||||||||||||||  | ||||||||||||  ||| |||||||||| |||| ||||    
T  50016105 cttatcatataagtgcttatgtatggactatttctataac-caaatataaaataaagtcaaattgg 50016041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 3182509 - 3182450
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||| |||||| |||||||||| ||| |||||||  |||||||||||||||| ||||    
T  3182509 cttatcatttaagtgtttatgtataagttacttctatag-aaaaagataaaataaagtcaa 3182450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 27291045 - 27291005
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaa 303  Q
    |||||||||||||||||| ||||||  ||||||||||||||    
T  27291045 ttatcatataagtgcttaggtataaggtatttctataacaa 27291005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 33307728 - 33307684
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    |||||||||||||||||||||||||||  ||||||  ||||||||    
T  33307728 acttatcatataagtgcttatgtataagctatttcagtaacaaaa 33307684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 43875398 - 43875442
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    ||||||||||||||||||| ||| ||| ||| |||||||||||||    
T  43875398 acttatcatataagtgcttgtgtttaagttacttctataacaaaa 43875442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 5885016 - 5884961
Alignment:
Q  251 tagcacaaaaacttatcatataagtgcttatgtataaattatttctataacaaaaa 306  Q
    ||||||||| |  |||||||||||||| ||||||||||||||||||||||||||||    
T  5885016 tagcacaaacatgtatcatataagtgcatatgtataaattatttctataacaaaaa 5884961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 507154 - 507197
Alignment:
Q  273 agtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  507154 agtgcttatgtataaattatttctataac-aaaagataaaataaa 507197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 305
Target Start/End: Complemental strand, 31668831 - 31668789
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  31668831 ttatcatataagtgcttatgtataagctatttctataacaaaa 31668789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 33068708 - 33068655
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataa 316  Q
    ||||||| |||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  33068708 cttatcaaataaatgcttatgtataagttatttctataac-aaaagataaaataa 33068655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 6647315 - 6647356
Alignment:
Q  265 atcatataagtgcttatgtataaattatttctataacaaaaa 306  Q
    ||||||| ||||||||||||||| ||||||||||||||||||    
T  6647315 atcatatgagtgcttatgtataagttatttctataacaaaaa 6647356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 323
Target Start/End: Original strand, 13360658 - 13360718
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaag 323  Q
    ||||||||||||||||||||||  ||| |||||||||||| |||| |||||||||| |||||    
T  13360658 cttatcatataagtgcttatgtgcaaactatttctataac-aaaatataaaataaagtcaag 13360718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 2514625 - 2514684
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||| |||||||||||||||||  |||||||||||  ||||||||||||||| ||||    
T  2514625 cttatcatgtaagtgcttatgtataagctatttctataa-taaaagataaaataaagtcaa 2514684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 3169393 - 3169349
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||    
T  3169393 acttatcatataagtgcttatgtgtaacctatttctataacaaaa 3169349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 322
Target Start/End: Complemental strand, 5637373 - 5637313
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctat-aacaaaaagataaaataaactcaa 322  Q
    ||||||||||||||||||| |||||| ||||||||| || || ||||||||||||| ||||    
T  5637373 ttatcatataagtgcttatttataaactatttctatcaaaaagaagataaaataaagtcaa 5637313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 8349812 - 8349757
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||||||||||||||| || |||||||| ||||||| |||| |||||||||||||||    
T  8349812 acttatcatataagtgtttgtgtataaactatttctctaac-aaaagataaaataaa 8349757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 24774681 - 24774740
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||| ||||||||||| |||||| |||||||||||| |||| |||||||||| ||||    
T  24774681 cttatcatgtaagtgcttatatataaactatttctataac-aaaatataaaataaagtcaa 24774740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 29269819 - 29269878
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||||| ||||| |||||||| |||||||||||| | ||||||||||||| ||||    
T  29269819 cttatcatataaatgcttgtgtataaactatttctataac-agaagataaaataaagtcaa 29269878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 5328898 - 5328956
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||| ||||||||| || ||| ||||||||||||| ||||||||||||||| ||||    
T  5328898 ttatcataaaagtgcttacgtttaagttatttctataac-aaaagataaaataaagtcaa 5328956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 29249397 - 29249440
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    |||||||||||||||||||||||| |  ||||||||||||||||    
T  29249397 cttatcatataagtgcttatgtatcagctatttctataacaaaa 29249440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 322
Target Start/End: Complemental strand, 31671021 - 31670963
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||||||||| ||||| | ||||||||||| || |||||||||||| ||||    
T  31671021 ttatcatataagtgcttatatataagtcatttctataac-aatagataaaataaattcaa 31670963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 305
Target Start/End: Complemental strand, 4247780 - 4247738
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    ||||||| |||||||||||||||||  ||||||||||||||||    
T  4247780 ttatcatgtaagtgcttatgtataagctatttctataacaaaa 4247738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 314
Target Start/End: Complemental strand, 5554910 - 5554861
Alignment:
Q  264 tatcatataagtgcttatgtataaattatttctataacaaaaagataaaat 314  Q
    ||||||||| ||| |||||||||| ||||||||||||| ||||||||||||    
T  5554910 tatcatatacgtgtttatgtataagttatttctataac-aaaagataaaat 5554861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 312
Target Start/End: Complemental strand, 8147496 - 8147442
Alignment:
Q  258 aaaacttatcatataagtgcttatgtataaattatttctataacaaaaagataaa 312  Q
    ||||||| |||||||| ||||||||||| | |||||||||||| | |||||||||    
T  8147496 aaaacttgtcatataaatgcttatgtatgagttatttctataaaataaagataaa 8147442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 10452505 - 10452448
Alignment:
Q  264 tatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||| |||||||||||||||  |||||||||||| |||| |||||||||| ||||    
T  10452505 tatcatatcagtgcttatgtataagctatttctataac-aaaatataaaataaaatcaa 10452448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 322
Target Start/End: Complemental strand, 24836340 - 24836287
Alignment:
Q  268 atataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||  |||||||||| ||||||||||||| ||||||||||||||| ||||    
T  24836340 atataagtatttatgtataagttatttctataac-aaaagataaaataaagtcaa 24836287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 1810445 - 1810393
Alignment:
Q  264 tatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    ||||||||||||||||||| | ||  |||||||||||| |||||||||||||||    
T  1810445 tatcatataagtgcttatgcaaaagctatttctataac-aaaagataaaataaa 1810393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 2456884 - 2456934
Alignment:
Q  271 taagtgcttatgtataaattatttctataacaaaaagataaaataaactcaag 323  Q
    |||||||||||||||||| |||||| |||||  |||||||||||||| |||||    
T  2456884 taagtgcttatgtataaactatttcgataac--aaagataaaataaagtcaag 2456934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 4325454 - 4325417
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataa 300  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  4325454 ttatcatataagtgcttatgtctaagttatttctataa 4325417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 27889989 - 27889937
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataa 316  Q
    ||||||||| |||||||||||| || ||||||||||||| || |||||||||||    
T  27889989 ttatcatatgagtgcttatgtacaagttatttctataac-aacagataaaataa 27889937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 322
Target Start/End: Complemental strand, 741014 - 740953
Alignment:
Q  263 ttatcatataagtgcttatgtataa---attatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||| |||||||||||||   ||| |||||||||| ||||||||||||||| ||||    
T  741014 ttatcatataaatgcttatgtataagctattttttctataac-aaaagataaaataaagtcaa 740953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 4248885 - 4248940
Alignment:
Q  266 tcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||||||||| |||||  |||||| ||||| ||||||||||||||| ||||    
T  4248885 tcatataagtgcttatatataagctatttcaataac-aaaagataaaataaagtcaa 4248940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 304
Target Start/End: Original strand, 6654544 - 6654580
Alignment:
Q  268 atataagtgcttatgtataaattatttctataacaaa 304  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  6654544 atataagggcttatgtataagttatttctataacaaa 6654580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 303
Target Start/End: Original strand, 8010281 - 8010321
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaa 303  Q
    |||||||||||||||||| ||||||  ||||||||||||||    
T  8010281 ttatcatataagtgcttaggtataagctatttctataacaa 8010321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 8420344 - 8420285
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||||||||||||| || |||||||| |||  ||| ||||||||||| ||||    
T  8420344 cttatcatataagtgcttatgtacaagttatttctttaa-taaatgataaaataaagtcaa 8420285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 28531688 - 28531629
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||| |||||||  ||||||| |||||| |||||||||| ||||||||||| ||||    
T  28531688 cttatcataaaagtgctcttgtataagttatttatataacaaaa-gataaaataaagtcaa 28531629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 28660235 - 28660180
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||||||||||||||| |||| |||||||||||| ||| |  |||||||||||||||    
T  28660235 acttatcatataagtgtttatatataaattatttttatga-taaaagataaaataaa 28660180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 29274376 - 29274317
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||| || |||||||||||||  |||||||||| | ||||||||||||||| ||||    
T  29274376 cttatcatagaaatgcttatgtataagctatttctatagc-aaaagataaaataaagtcaa 29274317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 305
Target Start/End: Original strand, 31461608 - 31461644
Alignment:
Q  269 tataagtgcttatgtataaattatttctataacaaaa 305  Q
    |||||||||||||||||||  ||||||||||||||||    
T  31461608 tataagtgcttatgtataagctatttctataacaaaa 31461644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 300
Target Start/End: Complemental strand, 32843456 - 32843424
Alignment:
Q  268 atataagtgcttatgtataaattatttctataa 300  Q
    |||||||||||||||||||| ||||||||||||    
T  32843456 atataagtgcttatgtataagttatttctataa 32843424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 32975905 - 32975960
Alignment:
Q  266 tcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||| |||||||||| |||||||| |||| |||| |||||||||| ||||    
T  32975905 tcatataagtgtttatgtataagttatttctgtaac-aaaatataaaataaagtcaa 32975960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 321
Target Start/End: Complemental strand, 45769882 - 45769832
Alignment:
Q  270 ataagtgcttatgtataaattatttctataacaaaaagataaaataaactca 321  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  45769882 ataagtgcttatgtgtaaattatttctataac-aaaagataaaataaactca 45769832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 314
Target Start/End: Original strand, 870968 - 871019
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaat 314  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||    
T  870968 cttatcatataagtgcttatgtataaactatttttataac-aaaagataaaat 871019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 48282056 - 48282116
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||||||||||||| ||  ||||||||||| | |||||||||||||| ||||    
T  48282056 cttatcatataagtgcttatgtaaaagctatttctataaaagaaagataaaataaagtcaa 48282116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 49557063 - 49557118
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    ||||||||||||||||||  ||||||| ||||||||||||| |||||||||||||||    
T  49557063 acttatcatataagtgctgctgtataagttatttctataac-aaaagataaaataaa 49557118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 314
Target Start/End: Original strand, 6659627 - 6659677
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaat 314  Q
    |||||||||||||||||||||||||| |||||||||| | ||||||||||||    
T  6659627 ttatcatataagtgcttatgtataaactatttctatagc-aaaagataaaat 6659677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 16982083 - 16982029
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    ||||||||||||||| |||||||||| ||||||| ||||| |||||||||||||||    
T  16982083 cttatcatataagtgtttatgtataacttatttcgataac-aaaagataaaataaa 16982029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 305
Target Start/End: Complemental strand, 4202275 - 4202233
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  4202275 ttatcatataagtgcttaagtataagttatttctataacaaaa 4202233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 326
Target Start/End: Original strand, 4200151 - 4200215
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaagttg 326  Q
    ||||||||| |||||| |||| ||||| |||||| |||||||||| ||||||||||| ||||||||    
T  4200151 acttatcatctaagtgtttatatataagttatttttataacaaaa-gataaaataaagtcaagttg 4200215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 23895259 - 23895318
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||||  ||||||||||  |||||||||||| ||||||||||||||| ||||    
T  23895259 cttatcatataagttattatgtataagctatttctataac-aaaagataaaataaattcaa 23895318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 41638458 - 41638403
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    ||||||||||||||||||||||||||| |||||| || ||| | |||||||||||||    
T  41638458 acttatcatataagtgcttatgtataatttatttatagaac-acaagataaaataaa 41638403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 305
Target Start/End: Original strand, 13037791 - 13037830
Alignment:
Q  266 tcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  13037791 tcatataagtgcttatgtataagctatttctataacaaaa 13037830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 305
Target Start/End: Original strand, 17269177 - 17269216
Alignment:
Q  266 tcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  17269177 tcatataagtgcttatgtataagttatttctagaacaaaa 17269216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 322
Target Start/End: Original strand, 4548649 - 4548703
Alignment:
Q  268 atataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||| ||||||| | ||||| | |||||||||||||||||||| ||||    
T  4548649 atataagtgctcatgtatagactatttttgtaacaaaaagataaaataaagtcaa 4548703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 36641800 - 36641857
Alignment:
Q  264 tatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||| | ||||| ||||| ||||||||||||| ||||||||||||||| ||||    
T  36641800 tatcatataattacttatatataagttatttctataac-aaaagataaaataaagtcaa 36641857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 37591356 - 37591409
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||||||||  ||||||||||||||| |||||||||||  |||||||||||||||    
T  37591356 ttatcatattggtgcttatgtataaactatttctataa-taaaagataaaataaa 37591409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 303
Target Start/End: Original strand, 37818386 - 37818428
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaa 303  Q
    ||||| || |||||||||||||||||| |||||||||||||||    
T  37818386 acttaccaaataagtgcttatgtataagttatttctataacaa 37818428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 323
Target Start/End: Original strand, 42336588 - 42336645
Alignment:
Q  265 atcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaag 323  Q
    ||||||| ||||||||||||||  |||||| ||||||||||| |||||||||| |||||    
T  42336588 atcatattagtgcttatgtataggttatttttataacaaaaa-ataaaataaagtcaag 42336645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 46500003 - 46499942
Alignment:
Q  260 aacttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||| ||||||||||||||| |||||  |||||||||||  ||||||||||||||| ||||    
T  46500003 aacttaacatataagtgcttatctataagctatttctataa-gaaaagataaaataaagtcaa 46499942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 6981422 - 6981459
Alignment:
Q  269 tataagtgcttatgtataaattatttctataacaaaaa 306  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  6981422 tataagtgtttatatataaattatttctataacaaaaa 6981459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 16980748 - 16980808
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||||||||||||||||| | ||||||| || |||| | ||||||||| ||||    
T  16980748 acttatcatataagtgcttatgtataagtcatttctacaa-aaaatggtaaaataaaatcaa 16980808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 305
Target Start/End: Complemental strand, 24146396 - 24146363
Alignment:
Q  272 aagtgcttatgtataaattatttctataacaaaa 305  Q
    |||||||||||||||| |||||||||||||||||    
T  24146396 aagtgcttatgtataagttatttctataacaaaa 24146363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 302
Target Start/End: Complemental strand, 24857658 - 24857621
Alignment:
Q  265 atcatataagtgcttatgtataaattatttctataaca 302  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  24857658 atcatataagtgtttatgtataaactatttctataaca 24857621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 50319230 - 50319278
Alignment:
Q  277 cttatgtataaattatttctataacaaaaagataaaataaactcaagttg 326  Q
    |||||||||||  |||||||||||| ||||||||||||||| ||||||||    
T  50319230 cttatgtataagctatttctataac-aaaagataaaataaagtcaagttg 50319278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 7274086 - 7274027
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||||| ||||||||||||  |||||| |||||| ||||||| ||||||| ||||    
T  7274086 cttatcatataaatgcttatgtatatgttatttttataac-aaaagatgaaataaagtcaa 7274027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 29046061 - 29046017
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    ||||||| ||||||||||| |||||||  ||||||||||||||||    
T  29046061 acttatcgtataagtgcttgtgtataagatatttctataacaaaa 29046017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 49125757 - 49125801
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaa 306  Q
    |||||||||||||| |||||| |||| ||||||||| ||||||||    
T  49125757 cttatcatataagttcttatgaataagttatttctacaacaaaaa 49125801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 1219 - 1162
Alignment:
Q  264 tatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||||||||| ||||    
T  1219 tatcatataagtgcttatgtataagctatttctataac-aaaagataaaataaagtcaa 1162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 2756 - 2813
Alignment:
Q  264 tatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||||||||| ||||    
T  2756 tatcatataagtgcttatgtataagctatttctataac-aaaagataaaataaagtcaa 2813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 9922 - 9878
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaa 306  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||    
T  9922 cttatcatataggtgcttatgtataagttatttctataacaaaaa 9878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 42541 - 42592
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaata 315  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||||||    
T  42541 ttatcatataagtgcttatgtataagtcatttctataac-aaaagataaaata 42592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 27499 - 27558
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||| ||||||||||||||||| ||||||||||||| | ||||||||||||| ||||    
T  27499 cttatcatgtaagtgcttatgtataagttatttctataac-agaagataaaataaagtcaa 27558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 20982282 - 20982223
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||||||||||||||||  |||||||||||| ||| ||||||||||| ||||    
T  20982282 cttatcatataagtgcttatgtataagctatttctataac-aaaggataaaataaagtcaa 20982223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 35095930 - 35095871
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||||||||||||| | |||| |||||||||||| ||||||||||||||| ||||    
T  35095930 cttatcatataagtgcttatatttaaactatttctataac-aaaagataaaataaagtcaa 35095871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 37063217 - 37063162
Alignment:
Q  266 tcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||| |||||||||||||| |||||||||||| ||||||||||||||| ||||    
T  37063217 tcatataaatgcttatgtataaactatttctataac-aaaagataaaataaagtcaa 37063162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 26516221 - 26516275
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    ||||||||||||||||||||||||||  |||||||| ||| |||||||||||||||    
T  26516221 cttatcatataagtgcttatgtataagctatttctaaaac-aaaagataaaataaa 26516275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 304
Target Start/End: Complemental strand, 40499827 - 40499780
Alignment:
Q  257 aaaaacttatcatataagtgcttatgtataaattatttctataacaaa 304  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||||    
T  40499827 aaaagcttatcatataagtgcttatgtacaagttatttctataacaaa 40499780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 13224353 - 13224406
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||||||| ||||||||||||||||  |||||||||||| |||||||||||||||    
T  13224353 ttatcatagaagtgcttatgtataagctatttctataac-aaaagataaaataaa 13224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 7096271 - 7096215
Alignment:
Q  265 atcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||| ||||||||||||||||  |||||||||||| ||||||||||||||| ||||    
T  7096271 atcatacaagtgcttatgtataagctatttctataac-aaaagataaaataaagtcaa 7096215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 10391265 - 10391329
Alignment:
Q  251 tagcacaaaaacttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataa 316  Q
    ||||| ||| |||||||||||||||||||| ||||||  ||||| |||||| ||||||||||||||    
T  10391265 tagcataaacacttatcatataagtgcttacgtataagctatttttataac-aaaagataaaataa 10391329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 19113263 - 19113211
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataa 316  Q
    ||||||||||| |||||||||||||| ||||| ||||||||||| |||||||||    
T  19113263 ttatcatataattgcttatgtataaactatttttataacaaaaa-ataaaataa 19113211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 305
Target Start/End: Complemental strand, 18704179 - 18704139
Alignment:
Q  265 atcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    ||||||||||| ||||||||||| |||||||||||||||||    
T  18704179 atcatataagttcttatgtataagttatttctataacaaaa 18704139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 326
Target Start/End: Original strand, 32172576 - 32172639
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaagttg 326  Q
    ||||||||| ||| ||||||||||||| |||||||| ||| |||||||||||| || ||||||||    
T  32172576 cttatcatacaagagcttatgtataaactatttctacaac-aaaagataaaatgaagtcaagttg 32172639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 35135809 - 35135750
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||| |||||||||| ||||||||||  |||||||||||| ||||||||||||||| ||||    
T  35135809 cttaacatataagtgtttatgtataagatatttctataac-aaaagataaaataaagtcaa 35135750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 40097549 - 40097498
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaata 315  Q
    ||||||||||||||| ||||||||| ||||||||||||| | |||||||||||    
T  40097549 ttatcatataagtgcgtatgtataagttatttctataac-agaagataaaata 40097498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 304
Target Start/End: Complemental strand, 11095617 - 11095574
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaa 304  Q
    ||||| |||||||||| ||||||||||| |||||||||||||||    
T  11095617 acttaccatataagtgattatgtataaactatttctataacaaa 11095574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 302
Target Start/End: Original strand, 19177403 - 19177442
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataaca 302  Q
    |||||||||||||||||||||||||| |||||||| ||||    
T  19177403 ttatcatataagtgcttatgtataaactatttctacaaca 19177442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 317
Target Start/End: Complemental strand, 40048419 - 40048373
Alignment:
Q  270 ataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||||||||||||||||| || |||||||||| |||||||||||||||    
T  40048419 ataagtgcttatgtataagttgtttctataac-aaaagataaaataaa 40048373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 28586911 - 28586854
Alignment:
Q  264 tatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||| ||| ||||||||| | |||||||||||| ||||||||||||||| ||||    
T  28586911 tatcatatatgtggttatgtatacactatttctataac-aaaagataaaataaagtcaa 28586854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 29588792 - 29588846
Alignment:
Q  251 tagcacaaaaacttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    ||||| ||| |||| | ||||||||||||||||||||  ||||||||||||||||    
T  29588792 tagcataaacactttttatataagtgcttatgtataagctatttctataacaaaa 29588846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 305
Target Start/End: Original strand, 35963172 - 35963214
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    |||||| |||||||||| |||||||||||||||||||| ||||    
T  35963172 ttatcaaataagtgcttgtgtataaattatttctataagaaaa 35963214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 3951540 - 3951581
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaa 303  Q
    ||||||||||||||||||||||||||| ||||| || |||||    
T  3951540 cttatcatataagtgcttatgtataaaatatttatacaacaa 3951581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 3970813 - 3970768
Alignment:
Q  277 cttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||| ||||| ||||||||||||| |||||||||||||| ||||    
T  3970813 cttatggataaactatttctataacacaaagataaaataaagtcaa 3970768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 27104572 - 27104527
Alignment:
Q  251 tagcacaaaaacttatcatataagtgcttatgtataaattatttct 296  Q
    ||||| ||| |||||||||||||||||||| |||||| ||||||||    
T  27104572 tagcataaacacttatcatataagtgcttacgtataagttatttct 27104527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 27106080 - 27106016
Alignment:
Q  252 agcacaaaaacttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||| ||| ||||||  |||||||||||| |||||| | ||||||||||| |||||||||||||||    
T  27106080 agcataaacacttattgtataagtgcttacgtataagtcatttctataac-aaaagataaaataaa 27106016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 316
Target Start/End: Complemental strand, 34117675 - 34117627
Alignment:
Q  267 catataagtgcttatgtataaattatttctataacaaaaagataaaataa 316  Q
    ||||| ||||||||||||||| |||||||| |||| ||||||||||||||    
T  34117675 catattagtgcttatgtataagttatttctttaac-aaaagataaaataa 34117627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 29117077 - 29117018
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||||  || |||||||||  ||||||||||||| ||||||||||||||| ||||    
T  29117077 cttatcatatagctgattatgtatatgttatttctataac-aaaagataaaataaagtcaa 29117018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 315
Target Start/End: Original strand, 29802688 - 29802732
Alignment:
Q  271 taagtgcttatgtataaattatttctataacaaaaagataaaata 315  Q
    |||||| |||||| |||| ||||||||||||||||| ||||||||    
T  29802688 taagtgtttatgtgtaaactatttctataacaaaaaaataaaata 29802732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 36638668 - 36638712
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    |||||||||||| ||| | ||||||||| ||||||||||||||||    
T  36638668 acttatcatataggtgttaatgtataaactatttctataacaaaa 36638712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 38819723 - 38819679
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    |||||||||||||| |||||||||||   ||||||||||||||||    
T  38819723 acttatcatataagggcttatgtatacgctatttctataacaaaa 38819679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 991994 - 992047
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||||||||||||||||| |||||| || ||||||||||||||| ||||||||||    
T  991994 ttatcatataagtgcttacgtataagttgtttctataacaaaaa-ataaaataaa 992047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 6552418 - 6552365
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaata 315  Q
    |||||||||||||||||||||||| || ||||||||| ||| |||||||||||||    
T  6552418 acttatcatataagtgcttatgtacaagttatttctacaac-aaaagataaaata 6552365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 305
Target Start/End: Original strand, 47006972 - 47007014
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    |||||||||||||||||||||||||| | ||||||||||||||    
T  47006972 ttatcatataagtgcttatgtataaactttttctataacaaaa 47007014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 24973870 - 24973926
Alignment:
Q  265 atcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||||||||||||| ||  |||||||||||| ||||||||||||||| ||||    
T  24973870 atcatataagtgcttatgtaaaagctatttctataac-aaaagataaaataaattcaa 24973926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 264 - 305
Target Start/End: Original strand, 27492720 - 27492761
Alignment:
Q  264 tatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    |||||||||||| |||||||||||| ||||||||||||||||    
T  27492720 tatcatataagttcttatgtataaactatttctataacaaaa 27492761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 25511550 - 25511609
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||||| |  ||||||||||||||||||||| ||||||| ||||||| ||||    
T  25511550 cttatcatataagtgttgttgtataaattatttctataac-aaaagatgaaataaagtcaa 25511609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 33709370 - 33709430
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||| | ||||||||||||||| |||| || ||| |||||||||||||||| ||||    
T  33709370 cttatcatagaggtgcttatgtataaactattgctttaataaaaagataaaataaaatcaa 33709430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 39630544 - 39630588
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaa 306  Q
    |||||||  |||||||||||||||||||||||| |||||||||||    
T  39630544 cttatcacttaagtgcttatgtataaattatttatataacaaaaa 39630588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 49060463 - 49060522
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||||  ||||||||||  ||||||||||||||||| |||||||||| ||||    
T  49060463 cttatcatataagtatttatgtataagctatttctataacaaaaa-ataaaataaagtcaa 49060522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 314
Target Start/End: Original strand, 2013123 - 2013173
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaat 314  Q
    ||||| ||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  2013123 ttatcgtataaatgcttatgtataatttatttctataac-aaaagataaaat 2013173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 5373148 - 5373202
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||||||| ||||||||||||||||   |||||||||||| |||||||||||||||    
T  5373148 cttatcatgtaagtgcttatgtatatgctatttctataac-aaaagataaaataaa 5373202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 7244626 - 7244684
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||||||||||||||||||  |||||||||| | ||||||||||| ||| ||||    
T  7244626 ttatcatataagtgcttatgtataagctatttctatatc-aaaagataaaagaaagtcaa 7244684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 24975827 - 24975881
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    ||||||||||||||||| ||||||||  || ||||||||| |||||||||||||||    
T  24975827 cttatcatataagtgctgatgtataatctacttctataac-aaaagataaaataaa 24975881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 316
Target Start/End: Original strand, 33894549 - 33894599
Alignment:
Q  265 atcatataagtgcttatgtataaattatttctataacaaaaagataaaataa 316  Q
    ||||| |||||||||||||||||  |||||||||||| ||||||||||||||    
T  33894549 atcatgtaagtgcttatgtataagctatttctataac-aaaagataaaataa 33894599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 44241783 - 44241837
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    |||||||||||||||  ||||||||| ||||||||||||| || ||||||||||||    
T  44241783 cttatcatataagtgtgtatgtataagttatttctataac-aacagataaaataaa 44241837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 45078217 - 45078260
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataacaaaaa 306  Q
    |||||||||||||||||||||||||  ||||| |||||||||||    
T  45078217 ttatcatataagtgcttatgtataagctatttttataacaaaaa 45078260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 30496629 - 30496686
Alignment:
Q  264 tatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||| ||||||| ||||||||||| |||||||||||| |||| |||||||||| ||||    
T  30496629 tatcacataagtgtttatgtataaactatttctataac-aaaatataaaataaagtcaa 30496686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 3610888 - 3610836
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaaagataaaat 314  Q
    |||| ||||||||||||||||||||||  |||||||| ||| ||||||||||||    
T  3610888 acttgtcatataagtgcttatgtataagctatttctacaac-aaaagataaaat 3610836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 305
Target Start/End: Original strand, 46213728 - 46213769
Alignment:
Q  264 tatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    ||||||||||||||||||||| ||  ||||||||||||||||    
T  46213728 tatcatataagtgcttatgtaaaagctatttctataacaaaa 46213769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 47559752 - 47559711
Alignment:
Q  265 atcatataagtgcttatgtataaattatttctataacaaaaa 306  Q
    |||||||||||||||||| |||| ||||||||| ||||||||    
T  47559752 atcatataagtgcttatgaataagttatttctacaacaaaaa 47559711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 1431455 - 1431396
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||||| |||||||||| ||||||| ||||  |||| |||||||||| ||||    
T  1431455 cttatcatataagtgtttatgtataagttatttccataatgaaaa-ataaaataaagtcaa 1431396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 1432099 - 1432060
Alignment:
Q  277 cttatgtataaattatttctataacaaaaagataaaataaa 317  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  1432099 cttatgtataagttatttctataac-aaaagataaaataaa 1432060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 5269461 - 5269512
Alignment:
Q  270 ataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||||||| |||||||||||||| |||  ||||||||||||||| ||||    
T  5269461 ataagtgcttatatataaattatttctttaa-taaaagataaaataaagtcaa 5269512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 22388052 - 22388008
Alignment:
Q  261 acttatcatataagtgcttatgtataaattatttctataacaaaa 305  Q
    ||||||||| |||||||||||| ||||  ||||||||||||||||    
T  22388052 acttatcatttaagtgcttatggataagctatttctataacaaaa 22388008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 23721414 - 23721462
Alignment:
Q  252 agcacaaaaacttatcatataagtgcttatgtataaattatttctataa 300  Q
    |||| ||| |||||||||  ||||||||||||||||| |||||||||||    
T  23721414 agcataaacacttatcatcaaagtgcttatgtataaactatttctataa 23721462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 31341117 - 31341176
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    |||||||| ||| |||||||||||||  ||||| |||||| ||||||||||||||| ||||    
T  31341117 cttatcatctaaatgcttatgtataagctatttgtataac-aaaagataaaataaagtcaa 31341176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 35536030 - 35536089
Alignment:
Q  262 cttatcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||||||||  ||||||||||||  |||||||||||| | ||||||||||||| ||||    
T  35536030 cttatcatataaaggcttatgtataagctatttctataac-ataagataaaataaagtcaa 35536089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 98789 - 98752
Alignment:
Q  263 ttatcatataagtgcttatgtataaattatttctataa 300  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  98789 ttatcatataagtgcttatatataaattatctctataa 98752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 4367 - 4311
Alignment:
Q  266 tcatataagtgcttatgtataaattatttctataacaaaaagataaaataaactcaa 322  Q
    ||||||| |||||||| |||||  ||||||||||| ||| |||||||||||| ||||    
T  4367 tcatatatgtgcttatatataatctatttctataaaaaagagataaaataaagtcaa 4311  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 104267 - 104228
Alignment:
Q  276 gcttatgtataaattatttctataacaaaaagataaaataa 316  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  104267 gcttatgtataagttatttctataacaaaaa-ataaaataa 104228  T

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