View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0900_low_100 (Length: 213)
Name: NF0900_low_100
Description: NF0900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0900_low_100 |
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Alignment Details
Target: chr7 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 36141431 - 36141299
Alignment:
| Q |
1 |
tcaaacatattgttccttagactgcaagaagaatgagcataccgccgtaagtattatgactaattaagcatgattt---actaataaccatagaagatcc |
97 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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|
| T |
36141431 |
tcaaacatattgttccttagactgcaagaagaatgagcataccgccgtaagtattatgactaattaagcatgatttactactaataaccatagaagatcc |
36141332 |
T |
|
| Q |
98 |
tttctaaatctaaagttacaagcctaccctatg |
130 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |
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|
| T |
36141331 |
tttctaaatctaaagttacaagcctaccttatg |
36141299 |
T |
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