View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0900_low_19 (Length: 384)
Name: NF0900_low_19
Description: NF0900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0900_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 95 - 245
Target Start/End: Original strand, 10043878 - 10044028
Alignment:
| Q |
95 |
tcttaaaaaatcagcagaatcatcaaaaataaaacggcgaccacacagctccaaattcatcattatttgccaacttttttggttttggagccgtaactat |
194 |
Q |
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| T |
10043878 |
tcttaaaaaatcagcagaatcatcaaaaataaaacggcgaccacacagctccaaatttatcattatttgccaacttttttggttttggagccgtaactat |
10043977 |
T |
|
| Q |
195 |
tttggttctgtaggtctcttttggaacaccattctttgagatcttcttttt |
245 |
Q |
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| T |
10043978 |
tttggttctgtaggtctcttttggaacaccattctttgagatcttcttttt |
10044028 |
T |
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