View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0900_low_46 (Length: 291)
Name: NF0900_low_46
Description: NF0900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0900_low_46 |
 | |
|
| [»] scaffold0517 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 20)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 21 - 244
Target Start/End: Complemental strand, 4291283 - 4291060
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4291283 |
acatcatcacctcaattcaattctacaacgatattgaacacttattaactaaaatgctcaagataaacagagattgaataaaatttcgtagataactgaa |
4291184 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaaactaaactaactttgataaacgatatttataaaaaattgg |
220 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4291183 |
atgcatcggataagtggtcatggactaaaatttcaaaagtaacataaatgcacgagacaaactaaacttactttgataaacgatatttataaaaaattgg |
4291084 |
T |
|
| Q |
221 |
ttttgctaaaatgtttcatctcac |
244 |
Q |
| |
|
||||||||||||||||||| |||| |
|
|
| T |
4291083 |
ttttgctaaaatgtttcatgtcac |
4291060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 21 - 244
Target Start/End: Original strand, 41778317 - 41778550
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
41778317 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgctcaggataaacagaggttgaataaaatttcgtagataactgaa |
41778416 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagaca----------aactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
41778417 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
41778516 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtttcatctcac |
244 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
41778517 |
aaaaaattggttttgctaaaatgtttcatgtcac |
41778550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 21 - 244
Target Start/End: Original strand, 50988185 - 50988418
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
50988185 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgctcaagataaacagagattgaataaaatttcgtagataactgaa |
50988284 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagaca----------aactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
50988285 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
50988384 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtttcatctcac |
244 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
50988385 |
aaaaaattggttttgctaaaatgtttcatgtcac |
50988418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 21 - 244
Target Start/End: Original strand, 37398572 - 37398806
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
37398572 |
acatcatcacctcgattcaattctacaacgatattgaacacttatcaactaaaatgctcaggataaacagagattgaataaaatttcgtagataactgaa |
37398671 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagaca----------aactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
37398672 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
37398771 |
T |
|
| Q |
211 |
-aaaaaattggttttgctaaaatgtttcatctcac |
244 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
37398772 |
aaaaaaattggttttgctaaaatgtttcatgtcac |
37398806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 21 - 244
Target Start/End: Original strand, 41777455 - 41777688
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41777455 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgcacatgataaacagagattgaataaaatttcgtagaaaactgaa |
41777554 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagaca----------aactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||| |
|
|
| T |
41777555 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgggacaagttgtcgttaactaaactaactttgataaccgatatttaa |
41777654 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtttcatctcac |
244 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||| |
|
|
| T |
41777655 |
aaaaaattggctttgctaaaatgtttcatgtcac |
41777688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 21 - 235
Target Start/End: Complemental strand, 4292156 - 4291932
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4292156 |
acatcatcacctcaattcaattctacaacgatattgaacacttataaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
4292057 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||| |
|
|
| T |
4292056 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagagaagttgtcgctaactaaactaactttgataaacaatatttag |
4291957 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtt |
235 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
4291956 |
aaaaaattggttttgctaaaatgtt |
4291932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 21 - 244
Target Start/End: Complemental strand, 7715978 - 7715745
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
7715978 |
acatcatcacctcaattcaattctacaaagatattgaacacttatcaactaaaatgctcaggataaacagagattgaatacaatttcgtagataactgaa |
7715879 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagaca----------aactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
7715878 |
atgaatcggataagtggtcattgactaaaatttcaaaagtagcataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
7715779 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtttcatctcac |
244 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
7715778 |
aaaaaattggttttgctaaaatgtttcatgtcac |
7715745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 21 - 232
Target Start/End: Original strand, 37397699 - 37397920
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37397699 |
acatcatcacctcaattcaattctacaacgatattgaacacttatctactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
37397798 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||| |
|
|
| T |
37397799 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagagaaggtgtcgctaactaaactaactttgataaacaatatttag |
37397898 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaat |
232 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
37397899 |
aaaaaattggttttgctaaaat |
37397920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 21 - 235
Target Start/End: Original strand, 33209126 - 33209350
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
33209126 |
acatcatcacctcaattcaattctaaaacgatattgaacacttatcaactaaaatgcacaggataaacaaagattgaataaaatttcgtagaaaactgaa |
33209225 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||| |
|
|
| T |
33209226 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagagaagttgtcgctaactaaactaactttgataaacaatatttag |
33209325 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtt |
235 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
33209326 |
aaaaaattggttttgctaaaatgtt |
33209350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 21 - 235
Target Start/End: Original strand, 37398134 - 37398358
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
37398134 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaacttaaatgcacaagataaacagagattgaattaaatttcgtagataactgaa |
37398233 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||| |||||| |||||||||| |
|
|
| T |
37398234 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagctgtcgctaactaaacaaactgtgataaccgatatttat |
37398333 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtt |
235 |
Q |
| |
|
||||||||||| ||||||||||||| |
|
|
| T |
37398334 |
aaaaaattggtcttgctaaaatgtt |
37398358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 21 - 235
Target Start/End: Original strand, 41777879 - 41778103
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
41777879 |
acatcatcacctcaattcaattctacaacaatattgaacacttatcaacttaaatgcacaggataaacagagattgaataaaatttcgtagataactgaa |
41777978 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||| |||||| |||||||||| |
|
|
| T |
41777979 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagctgtcgctaactaaacaaactatgataaccgatatttat |
41778078 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtt |
235 |
Q |
| |
|
||||||||||| || || ||||||| |
|
|
| T |
41778079 |
aaaaaattggtcttactgaaatgtt |
41778103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 21 - 235
Target Start/End: Original strand, 50987747 - 50987971
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| | |||| || |
|
|
| T |
50987747 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaacttaaatgcacaagataaacagagattgaataaaatttcgtaaataacttaa |
50987846 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||| |||||| |||||||||| |
|
|
| T |
50987847 |
atgtatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagttgtcgctaactaaacaaactatgataaccgatatttat |
50987946 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtt |
235 |
Q |
| |
|
||||||||||| |||||||||||| |
|
|
| T |
50987947 |
aaaaaattggtcatgctaaaatgtt |
50987971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 21 - 235
Target Start/End: Complemental strand, 4291721 - 4291497
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||| | |||||||||||||||||||| ||||||| |
|
|
| T |
4291721 |
acatcatcacctcaattcaattctacaacgatattgcacacttatcaacttaaatgcacagaataaacatatattgaataaaatttcgtagataactgaa |
4291622 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| | |||||||| |||| |||||| |||||||||| |
|
|
| T |
4291621 |
atgcatcggataagtggtcattgagtaaaatttcaaaagtaacataaatggacgagataagttgtcgctaactaaacaaactatgataatcgatatttat |
4291522 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtt |
235 |
Q |
| |
|
||||||||||| ||||||||||||| |
|
|
| T |
4291521 |
aaaaaattggtcttgctaaaatgtt |
4291497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 25 - 172
Target Start/End: Original strand, 22521005 - 22521152
Alignment:
| Q |
25 |
catcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaaatgc |
124 |
Q |
| |
|
||||||||||||| |||| ||||| || || | |||||||||||| ||||| ||| || || || |||||||||||||| ||||| || |||||||| |
|
|
| T |
22521005 |
catcacctcaatttaattttacaatgaaatcgaacacttatcaacaaaaatacacgagacaagtaggcattgaataaaattttgtagataattgaaatgc |
22521104 |
T |
|
| Q |
125 |
atcggataagtggtcattgactaaaatttcaaaagtaacataaatgca |
172 |
Q |
| |
|
|| ||| |||||| ||||||||||||| |||||||||| |||||||| |
|
|
| T |
22521105 |
attggaaaagtgggcattgactaaaatagcaaaagtaacgtaaatgca |
22521152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 164
Target Start/End: Original strand, 22521452 - 22521590
Alignment:
| Q |
26 |
atcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaaatgca |
125 |
Q |
| |
|
||||||||||||||||||||||| ||||||| ||||||| ||||| ||| |||||| || |||||||| ||||||||||| |||||||||||| |
|
|
| T |
22521452 |
atcacctcaattcaattctacaatgatattgaacacttagtttaaaaaatacacgggataagtggacattgaatacaatttcgtagataactgaaatgca |
22521551 |
T |
|
| Q |
126 |
tcggataagtggtcattgactaaaatttcaaaagtaaca |
164 |
Q |
| |
|
| | | || ||| |||| |||||||||| |||||||||| |
|
|
| T |
22521552 |
tggtaaaaatgggcattcactaaaattttaaaagtaaca |
22521590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 22522000 - 22522132
Alignment:
| Q |
36 |
ttcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaaatgcatcggataagt |
135 |
Q |
| |
|
||||||||||||| | ||||| ||||||||||||||||||| || |||| ||| ||||||||||||| ||||| | | ||||||| ||| |||| |
|
|
| T |
22522000 |
ttcaattctacaatgttattgaacacttatcaactaaaatgtacgacataagtagacattgaataaaatt--gtagatagattaaatgcacgggagaagt |
22522097 |
T |
|
| Q |
136 |
ggtcattgactaaaatttcaaaagtaacataaatg |
170 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||| |
|
|
| T |
22522098 |
aggcattgactaaaatttctaaagtaacgtaaatg |
22522132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 22520500 - 22520553
Alignment:
| Q |
26 |
atcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcac |
79 |
Q |
| |
|
|||||||||||||||||||| || |||||| | |||||||||||||||||||| |
|
|
| T |
22520500 |
atcacctcaattcaattctaaaatgatattcaatacttatcaactaaaatgcac |
22520553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 172
Target Start/End: Original strand, 20201212 - 20201357
Alignment:
| Q |
26 |
atcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaaatgca |
125 |
Q |
| |
|
|||||||| |||||||| |||| || |||| || || |||||||||||||||| | ||||| || |||| |||||||| ||| | |||| ||||||| |
|
|
| T |
20201212 |
atcacctcgcttcaattcgacaatgacattgaactctcatcaactaaaatgcacggaataaatggacattgtctaaaattttgtaaataactaaaatgca |
20201311 |
T |
|
| Q |
126 |
tcggataagtggtcattgactaaaatttcaaaagtaacataaatgca |
172 |
Q |
| |
|
| ||| || ||| |||||| |||| |||||||||||| ||||||| |
|
|
| T |
20201312 |
tgggagaaatggacattga-gaaaaattcaaaagtaactcaaatgca |
20201357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 7715748 - 7715688
Alignment:
| Q |
27 |
tcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaa |
87 |
Q |
| |
|
|||||||| |||||||||| || ||||||| || || || ||||||||||||| ||||||| |
|
|
| T |
7715748 |
tcacctcacttcaattctataatgatattgaaccctcataaactaaaatgcacgggataaa |
7715688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 37398803 - 37398863
Alignment:
| Q |
27 |
tcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaa |
87 |
Q |
| |
|
|||||||| |||||||||| || ||||||| || || || ||||||||||||| ||||||| |
|
|
| T |
37398803 |
tcacctcacttcaattctataatgatattgaaccctcataaactaaaatgcacgggataaa |
37398863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 21 - 244
Target Start/End: Original strand, 21633384 - 21633617
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21633384 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
21633483 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagaca----------aactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
21633484 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
21633583 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtttcatctcac |
244 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
21633584 |
aaaaaattggttttgctaaaatgtttcatgtcac |
21633617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 21 - 244
Target Start/End: Complemental strand, 26059857 - 26059624
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
26059857 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgctcaggataaacagagattgaataaaatttcgtagataactgaa |
26059758 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagaca----------aactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
26059757 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
26059658 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtttcatctcac |
244 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
26059657 |
aaaaaattggttttgctaaaatgtttcatgtcac |
26059624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 21 - 239
Target Start/End: Original strand, 4358308 - 4358536
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4358308 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgctcaggttaaacagagattgaataaaatttcgtagataactgaa |
4358407 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagaca----------aactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4358408 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
4358507 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtttcat |
239 |
Q |
| |
|
|||| |||||||||||||||||||||||| |
|
|
| T |
4358508 |
aaaatattggttttgctaaaatgtttcat |
4358536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 21 - 235
Target Start/End: Complemental strand, 26060730 - 26060506
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26060730 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
26060631 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||| |
|
|
| T |
26060630 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagagaagttgtcgctaactaaactaactttgataaacaatatttag |
26060531 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtt |
235 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
26060530 |
aaaaaattggttttgctaaaatgtt |
26060506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 21 - 244
Target Start/End: Original strand, 21634247 - 21634480
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||||||||||| |||| || |
|
|
| T |
21634247 |
acatcatcacctcaattcaattctacaacgatattgaacacttattaactaaaatgctcaggataaacagagattaaataaaatttcgtagataactaaa |
21634346 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagaca----------aactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
21634347 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcactaactaaactaactttgataaacgatatttat |
21634446 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtttcatctcac |
244 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
21634447 |
aaaaaattggttttgctaaaatgtttcatgtcac |
21634480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 21 - 235
Target Start/End: Original strand, 4357435 - 4357659
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4357435 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
4357534 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||| ||||||| |
|
|
| T |
4357535 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacaagagaagttgtcgctaactaaactaactttgataaacaatatttag |
4357634 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtt |
235 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
4357635 |
aaaaaattggttttgctaaaatgtt |
4357659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 21 - 235
Target Start/End: Complemental strand, 26060295 - 26060071
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
26060295 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaacttaaatgcacaggataaacagagattgaataaaatttcgtagataactgaa |
26060196 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||| |||||| |||||||||| |
|
|
| T |
26060195 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagctgtcgctaactaaacaaactatgataaccgatatttat |
26060096 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtt |
235 |
Q |
| |
|
||||||||||| ||||||||||||| |
|
|
| T |
26060095 |
aaaaaattggtcttgctaaaatgtt |
26060071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 21 - 235
Target Start/End: Original strand, 4357870 - 4358094
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4357870 |
acatcatcacctcaatttaattctacaacgatattgaacacttatcaacttaaatgcacagaataaacagagattgaataaaatttcgtagataactgaa |
4357969 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||| |||||| |||||||||| |
|
|
| T |
4357970 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagctgtcgctaactaaacaaactatgataaccgatatttat |
4358069 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtt |
235 |
Q |
| |
|
||||||||||| ||||||||||||| |
|
|
| T |
4358070 |
aaaaaattggtcttgctaaaatgtt |
4358094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 21 - 235
Target Start/End: Original strand, 21633809 - 21634033
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
21633809 |
acatcatcacctcaattcaattctacaacaatattgaacacttatcaacttaaatgcacaggataaacagagattgaataaaatttcgtagataactgaa |
21633908 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||| |||||| |||||||||| |
|
|
| T |
21633909 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagctgtcgctaactaaacaaactatgataaccgatatttat |
21634008 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtt |
235 |
Q |
| |
|
||||||||||| || |||||||||| |
|
|
| T |
21634009 |
aaaaaattggtcttactaaaatgtt |
21634033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 21633614 - 21633694
Alignment:
| Q |
27 |
tcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttc |
107 |
Q |
| |
|
|||||||| |||||||||| || ||||||| || || || ||||||||||||| ||| ||||| | ||||| |||| |||| |
|
|
| T |
21633614 |
tcacctcacttcaattctataatgatattgaaccctcataaactaaaatgcacgggagaaacaaacattgactaaactttc |
21633694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 26059627 - 26059567
Alignment:
| Q |
27 |
tcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaa |
87 |
Q |
| |
|
|||||||| |||||||||| || ||||||| || || || ||||||||||||| ||||||| |
|
|
| T |
26059627 |
tcacctcacttcaattctataatgatattgaaccctcataaactaaaatgcacgggataaa |
26059567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 21 - 244
Target Start/End: Complemental strand, 46364621 - 46364388
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
46364621 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgctcaggataaacatagattgaataaaatttcgtagataactgaa |
46364522 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagaca----------aactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
46364521 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
46364422 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtttcatctcac |
244 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
46364421 |
aaaaaattggttttgctaaaatgtttcatgtcac |
46364388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 21 - 235
Target Start/End: Complemental strand, 46365495 - 46365271
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46365495 |
acatcatcatctcaattcaattctccaacgatattgaacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
46365396 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||| |
|
|
| T |
46365395 |
atgcatcagataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagagaagttgtcgctaactaaactaactttgataaacaatatttag |
46365296 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtt |
235 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
46365295 |
aaaaaattggttttgctaaaatgtt |
46365271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 21 - 235
Target Start/End: Complemental strand, 46365059 - 46364835
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
46365059 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaacttaaatgcacaggataaacagagattgaataaaattttgtagataactgaa |
46364960 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||| ||||||||||||||||| |
|
|
| T |
46364959 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagctgtcgctaactaaacaaaccatgataaacgatatttat |
46364860 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtt |
235 |
Q |
| |
|
||||||||||| ||||||||||||| |
|
|
| T |
46364859 |
aaaaaattggtcttgctaaaatgtt |
46364835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 175; Significance: 3e-94; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 21 - 244
Target Start/End: Complemental strand, 20400486 - 20400253
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
20400486 |
acatcatcacctcaattcaattctacaatgatattgaacacttatcaacttaaatgcacatgataaacagagattgaataaaatttcgtagataactgaa |
20400387 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagaca----------aactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
20400386 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
20400287 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtttcatctcac |
244 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
20400286 |
aaaaaattggttttgctaaaatgtttcatgtcac |
20400253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 21 - 235
Target Start/End: Original strand, 34996748 - 34996972
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34996748 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactagaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
34996847 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||| |
|
|
| T |
34996848 |
atgcatcggataagtggtcattggctaaaatttcaaaagtaacataaatgcacgagagaagttgtcgctaactaaactaactttgataaacaatatttag |
34996947 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtt |
235 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
34996948 |
aaaaaattggttttgctaaaatgtt |
34996972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 21 - 244
Target Start/End: Original strand, 34997621 - 34997854
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||| |
|
|
| T |
34997621 |
acatcatcacctcaattcaattctacaacgatattggacacttatcaactaaaatgctcaggataaacagagattgaataaaatttcgttaataactgaa |
34997720 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
34997721 |
atggatcggataagtggtcattgattaaaatttcaaaagtaacataaatgcacgagataagttgtcgctaactaaactaactttgataaacgatatttat |
34997820 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtttcatctcac |
244 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
34997821 |
aaaaaattggttttgctaaaatgtttcatgtcac |
34997854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 21 - 231
Target Start/End: Complemental strand, 20400922 - 20400701
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
20400922 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatacacaggataaatagagattgaataaaatttcgtagaaaactgaa |
20400823 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaa----------actaaac-taactttgataaacgatattta |
209 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||| ||||||| |
|
|
| T |
20400822 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagagaagttgtcgctgactaaacttaactttgataaacaatattta |
20400723 |
T |
|
| Q |
210 |
taaaaaattggttttgctaaaa |
231 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
20400722 |
gaaaaaattggttttgctaaaa |
20400701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 21 - 244
Target Start/End: Original strand, 17842958 - 17843191
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
17842958 |
acatcatcacctcaattcaattttacaatgatattaaacacttatcaacttaaatgcacaggataaacagagattgaatacaatttcgtagataactgaa |
17843057 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagaca----------aactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
|| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
17843058 |
atacatcggataagtggtcattaactaaaatttcaaaagtaaaataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
17843157 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtttcatctcac |
244 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||| |
|
|
| T |
17843158 |
aaaaaattgattttgctaaaatgtttcatgtcac |
17843191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 21 - 235
Target Start/End: Original strand, 34997182 - 34997406
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
34997182 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaacttaaatgcacaggataaacagagattaaataaaatttcgtagataactgaa |
34997281 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||| |||||| |||||||||| |
|
|
| T |
34997282 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagctgtcgctaactaaacaaactatgataaccgatatttat |
34997381 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtt |
235 |
Q |
| |
|
||||||||||| |||||||||||| |
|
|
| T |
34997382 |
aaaaaattggtcatgctaaaatgtt |
34997406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 20400256 - 20400196
Alignment:
| Q |
27 |
tcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaa |
87 |
Q |
| |
|
|||||||| |||||||||| || ||||||| || || || ||||||||||||| ||||||| |
|
|
| T |
20400256 |
tcacctcacttcaattctataatgatattgaaccctcataaactaaaatgcacgggataaa |
20400196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 34997851 - 34997911
Alignment:
| Q |
27 |
tcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaa |
87 |
Q |
| |
|
|||||||| |||||||||| || ||||||| || || || ||||||||||||| ||||||| |
|
|
| T |
34997851 |
tcacctcacttcaattctataatgatattgaaccctcataaactaaaatgcacgggataaa |
34997911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 175; Significance: 3e-94; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 21 - 244
Target Start/End: Complemental strand, 36032180 - 36031947
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
36032180 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgctcaagataaacagagattgaataaaatttcatagataactgaa |
36032081 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagaca----------aactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
36032080 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
36031981 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtttcatctcac |
244 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
36031980 |
aaaaaattggttttgctaaaatgtttcatgtcac |
36031947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 21 - 239
Target Start/End: Original strand, 18122204 - 18122432
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
18122204 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgctcaggttaaacagagattgaataaaatttcgtagataactgaa |
18122303 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagaca----------aactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
18122304 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
18122403 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtttcat |
239 |
Q |
| |
|
|||| |||||||||||||||||||||||| |
|
|
| T |
18122404 |
aaaatattggttttgctaaaatgtttcat |
18122432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 21 - 235
Target Start/End: Original strand, 37086214 - 37086438
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37086214 |
acatcatcacctcaattccattctacagcgatattgaacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
37086313 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||| |
|
|
| T |
37086314 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagagaagttgtcgctaactaaactaactttgataaacaatatttag |
37086413 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtt |
235 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
37086414 |
aaaaaattggttttgctaaaatgtt |
37086438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 21 - 235
Target Start/End: Complemental strand, 36033052 - 36032828
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
36033052 |
acatcatcacctcaattcaattctacaacgatattgaacactgatcaactaaaatgcacaggataaacagagattgaataaaatttcgcagaaaactgaa |
36032953 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||| |
|
|
| T |
36032952 |
atgcatcggataagtggtcattaactaaaatttcaaaagtaacataaatgcacgagagaagttgtcgctaactaaactaactttgataaacaatatttag |
36032853 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtt |
235 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
36032852 |
aaaaaattggttttgctaaaatgtt |
36032828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 21 - 227
Target Start/End: Original strand, 37087087 - 37087303
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
37087087 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgctcgggataaacagagattgaataaaatttcgtagataactgaa |
37087186 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
37087187 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagttgtcgctaactaaactaactttgataaacgatatttat |
37087286 |
T |
|
| Q |
211 |
aaaaaattggttttgct |
227 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
37087287 |
aaaaaattggttttgct |
37087303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 21 - 235
Target Start/End: Original strand, 37086649 - 37086873
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
37086649 |
acatcatcacctcaattcaattctacaacgataatgaacacttatcaacttaaatgcacaggataaacagagattgaataaaatttcgtagataactgaa |
37086748 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||| |||||| |||||||||| |
|
|
| T |
37086749 |
atgcattggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagctgtcgctaactaaacaaactatgataaccgatatttat |
37086848 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtt |
235 |
Q |
| |
|
||||||||||| ||||||||||||| |
|
|
| T |
37086849 |
aaaaaattggtcttgctaaaatgtt |
37086873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 21 - 235
Target Start/End: Complemental strand, 36032618 - 36032394
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
36032618 |
acatcaccacctcaattcgattctacaacgatattgcacacttatcaacttaaatgcacaggataaacagagattgaataaaatttcgtagataactgaa |
36032519 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||| |||||| |||||||||| |
|
|
| T |
36032518 |
atgcatcagataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagctgtcgctaactaaacaaactatgataaccgatatttat |
36032419 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaatgtt |
235 |
Q |
| |
|
||||||||||| ||||||||||||| |
|
|
| T |
36032418 |
aaaaaattggtcttgctaaaatgtt |
36032394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 37087310 - 37087370
Alignment:
| Q |
27 |
tcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaa |
87 |
Q |
| |
|
|||||||| |||||||||| || ||||||| || ||||| ||||||||||||| ||||||| |
|
|
| T |
37087310 |
tcacctcacttcaattctataatgatattgaacccttataaactaaaatgcacgggataaa |
37087370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 177
Target Start/End: Original strand, 54962248 - 54962389
Alignment:
| Q |
36 |
ttcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaaatgcatcggataagt |
135 |
Q |
| |
|
||||||||||||| ||||||| || | ||||||||||||| || ||||| || |||| || ||||| ||| | |||| |||||||| || |||| |
|
|
| T |
54962248 |
ttcaattctacaatgatattgaaccgtcatcaactaaaatgaacgatataaatggacattgtctacaattttgtaaataactaaaatgcatgagagaagt |
54962347 |
T |
|
| Q |
136 |
ggtcattgactaaaatttcaaaagtaacataaatgcacgaga |
177 |
Q |
| |
|
|| |||| || ||||||||||||||||| ||||| |||||| |
|
|
| T |
54962348 |
gggcattaacaaaaatttcaaaagtaactcaaatgtacgaga |
54962389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0517 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: scaffold0517
Description:
Target: scaffold0517; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 21 - 232
Target Start/End: Complemental strand, 9514 - 9293
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
9514 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgctcaggataaacagagattgaataaaatttcgtagataactgaa |
9415 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgaga----------caaactaaactaactttgataaacgatatttat |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||| |
|
|
| T |
9414 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagctgtcgctaactaaactaactttgataatcgatatttat |
9315 |
T |
|
| Q |
211 |
aaaaaattggttttgctaaaat |
232 |
Q |
| |
|
||||||||||| |||||||||| |
|
|
| T |
9314 |
aaaaaattggtcttgctaaaat |
9293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 129; Significance: 8e-67; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 21 - 161
Target Start/End: Complemental strand, 29589083 - 29588943
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
120 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
29589083 |
acatcatcacctcaattcaattctacaacaatattgaacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagataactgaa |
29588984 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagta |
161 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29588983 |
atgcatcggataagtggtcattgactaaaatttcaaaagta |
29588943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 130 - 244
Target Start/End: Complemental strand, 44841104 - 44840980
Alignment:
| Q |
130 |
ataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaa----------actaaactaactttgataaacgatatttataaaaaattg |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44841104 |
ataagtggtcattgactaaaatttcaaaagtaacataaatgaacgaaacaagttgtcgctaactaaactaactttgataaacgatatttataaaaaattg |
44841005 |
T |
|
| Q |
220 |
gttttgctaaaatgtttcatctcac |
244 |
Q |
| |
|
||||||||||||||||||| |||| |
|
|
| T |
44841004 |
attttgctaaaatgtttcatatcac |
44840980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 18754613 - 18754465
Alignment:
| Q |
23 |
atcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaaat |
122 |
Q |
| |
|
|||||||| ||||||||||||||||| | ||||| | |||||||||||||||||||| |||||| || | |||| ||||||||||| | ||||||||| |
|
|
| T |
18754613 |
atcatcacttcaattcaattctacaatgttattgaatacttatcaactaaaatgcactagataaatggacaatgaacaaaatttcgtatataactgaaat |
18754514 |
T |
|
| Q |
123 |
gcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgca |
172 |
Q |
| |
|
|| | | || ||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
18754513 |
gcgt-gctgaactgggcattgactaaaatttcaaaagtaacgtaaatgca |
18754465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 177
Target Start/End: Complemental strand, 18754194 - 18754039
Alignment:
| Q |
23 |
atcatcacctcaattcaattctacaacgatattgtacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaaat |
122 |
Q |
| |
|
||||||||||||||| ||| | ||| ||||||| ||||||||||| | |||||||| || || | | ||||||||||||| |||||| ||||||||| |
|
|
| T |
18754194 |
atcatcacctcaatttaatgcatcaatgatattgaacacttatcaatttaaatgcacgagacaagtacatattgaataaaattacgtagataactgaaat |
18754095 |
T |
|
| Q |
123 |
gcatcggataagtggtcattgactaaa-atttcaaaagtaacataaatgcacgaga |
177 |
Q |
| |
|
||||| || || ||||||||||||||| ||| ||||||||| ||||||||||||| |
|
|
| T |
18754094 |
gcatctgaaaaatggtcattgactaaactttttaaaagtaacgtaaatgcacgaga |
18754039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 5323840 - 5323901
Alignment:
| Q |
114 |
aactgaaatgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacga |
175 |
Q |
| |
|
|||| |||||||| ||| |||||| ||||||| |||| |||||||||||| |||||||||| |
|
|
| T |
5323840 |
aactaaaatgcatgggagaagtgggcattgacaaaaaattcaaaagtaactcaaatgcacga |
5323901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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