View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0900_low_94 (Length: 220)
Name: NF0900_low_94
Description: NF0900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0900_low_94 |
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Alignment Details
Target: chr4 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 76 - 196
Target Start/End: Complemental strand, 472189 - 472069
Alignment:
| Q |
76 |
atcaaatgtttaagtagcaaaaagtacaaatcaataaattcaaaacagtagcatcatgtagtcaactatactccactagttacttcctttgaaatcacta |
175 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
472189 |
atcaaatgtttaagtagcaaaaagtactaatcaataaattcaaaacagtagcatcatgtagtcaactatactccactagttacttcctttgaaatcacta |
472090 |
T |
|
| Q |
176 |
acggatagcatataccaaggg |
196 |
Q |
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||||||||||||||||||||| |
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| T |
472089 |
acggatagcatataccaaggg |
472069 |
T |
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