View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0903_high_16 (Length: 269)
Name: NF0903_high_16
Description: NF0903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0903_high_16 |
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Alignment Details
Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 22 - 234
Target Start/End: Complemental strand, 51804761 - 51804549
Alignment:
| Q |
22 |
tgttgcctaattctataaacttttcacacaatcttctttctggtcctattcctcctaaattgattaaaggagggttagttgaaagctttgcagggaatcc |
121 |
Q |
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| T |
51804761 |
tgttgcctaattctataaacttttcacacaatcttctttctggtcctattcctcctaaattgattaaaggagggttagttgaaagctttgcagggaatcc |
51804662 |
T |
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| Q |
122 |
tggtttatgtgtgatgatgccggttaatgctaattcatctgatcaaagaaactttccattatgttcggatggttacaagagtaagaagatgaacactata |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
51804661 |
tggtttatgtgtgatgatgccggttaatgctaattcatctgatcaaagaaactttccattatgttcacatggttacaagagtaagaagatgaacactata |
51804562 |
T |
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| Q |
222 |
tgggtggccggtg |
234 |
Q |
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||||||||||||| |
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| T |
51804561 |
tgggtggccggtg |
51804549 |
T |
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