View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0903_high_2 (Length: 602)

Name: NF0903_high_2
Description: NF0903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0903_high_2
NF0903_high_2
[»] chr7 (33 HSPs)
chr7 (1-201)||(229478-229679)
chr7 (219-368)||(24307009-24307158)
chr7 (204-369)||(30469339-30469503)
chr7 (204-369)||(32022563-32022728)
chr7 (204-368)||(42489874-42490038)
chr7 (219-369)||(24306353-24306503)
chr7 (204-369)||(36784415-36784580)
chr7 (204-369)||(30001793-30001957)
chr7 (204-369)||(30002459-30002624)
chr7 (204-369)||(32021212-32021376)
chr7 (204-369)||(36783749-36783913)
chr7 (204-368)||(37706224-37706387)
chr7 (223-369)||(42489222-42489368)
chr7 (217-369)||(30468695-30468847)
chr7 (204-306)||(30470970-30471071)
chr7 (229-306)||(30470127-30470204)
chr7 (302-369)||(26928582-26928649)
chr7 (463-548)||(24306830-24306914)
chr7 (463-548)||(30468938-30469022)
chr7 (463-548)||(42489695-42489779)
chr7 (463-548)||(30002281-30002365)
chr7 (463-548)||(32022152-32022236)
chr7 (463-548)||(36784007-36784091)
chr7 (204-276)||(21415389-21415461)
chr7 (204-302)||(3219294-3219391)
chr7 (204-274)||(30659844-30659914)
chr7 (204-274)||(31179915-31179985)
chr7 (204-274)||(43334119-43334189)
chr7 (203-274)||(38059835-38059906)
chr7 (204-274)||(3162858-3162928)
chr7 (204-274)||(3163494-3163563)
chr7 (206-244)||(46428145-46428183)
chr7 (204-265)||(8513469-8513530)
[»] chr3 (27 HSPs)
chr3 (204-369)||(16303290-16303455)
chr3 (204-369)||(46889167-46889332)
chr3 (205-368)||(46914962-46915124)
chr3 (205-368)||(50802491-50802653)
chr3 (205-368)||(50873224-50873386)
chr3 (222-368)||(37986421-37986567)
chr3 (219-369)||(37987073-37987223)
chr3 (204-369)||(16302623-16302787)
chr3 (204-369)||(46915627-46915791)
chr3 (219-361)||(46888480-46888622)
chr3 (204-369)||(50801822-50801987)
chr3 (204-369)||(50873893-50874058)
chr3 (219-369)||(13644022-13644172)
chr3 (252-352)||(18346985-18347085)
chr3 (219-319)||(16854594-16854694)
chr3 (302-369)||(18346932-18346999)
chr3 (463-548)||(50802312-50802396)
chr3 (463-548)||(50873481-50873565)
chr3 (463-548)||(16303112-16303196)
chr3 (463-548)||(37986662-37986746)
chr3 (222-308)||(7253229-7253315)
chr3 (204-273)||(54584877-54584945)
chr3 (500-548)||(46888957-46889005)
chr3 (206-274)||(53948651-53948719)
chr3 (204-274)||(20200605-20200675)
chr3 (204-274)||(20202789-20202859)
chr3 (204-274)||(53950074-53950144)
[»] chr8 (22 HSPs)
chr8 (204-369)||(24022923-24023087)
chr8 (204-369)||(20054258-20054423)
chr8 (216-369)||(41272966-41273119)
chr8 (205-369)||(34654192-34654356)
chr8 (204-369)||(34654824-34654984)
chr8 (219-369)||(14763229-14763379)
chr8 (218-352)||(41273703-41273837)
chr8 (204-350)||(20054903-20055048)
chr8 (204-319)||(3583593-3583708)
chr8 (204-319)||(3583242-3583357)
chr8 (204-306)||(29267934-29268035)
chr8 (204-300)||(29268785-29268881)
chr8 (219-300)||(16846817-16846898)
chr8 (204-319)||(16847624-16847738)
chr8 (204-300)||(3582422-3582518)
chr8 (463-548)||(20054751-20054835)
chr8 (204-299)||(14754163-14754256)
chr8 (463-548)||(41273316-41273400)
chr8 (500-548)||(34654488-34654536)
chr8 (204-273)||(10092908-10092977)
chr8 (463-492)||(41273213-41273242)
chr8 (204-244)||(5881132-5881172)
[»] chr4 (31 HSPs)
chr4 (204-368)||(6784830-6784994)
chr4 (204-368)||(42419612-42419775)
chr4 (204-369)||(19549451-19549616)
chr4 (219-369)||(19550127-19550277)
chr4 (204-369)||(25236377-25236542)
chr4 (204-369)||(42418974-42419139)
chr4 (219-369)||(36854913-36855063)
chr4 (204-369)||(12834408-12834573)
chr4 (204-369)||(25478699-25478864)
chr4 (204-365)||(36855571-36855731)
chr4 (215-369)||(18032757-18032911)
chr4 (204-369)||(12835077-12835241)
chr4 (204-369)||(25478066-25478227)
chr4 (214-369)||(50696183-50696338)
chr4 (215-365)||(50696831-50696981)
chr4 (246-369)||(29101725-29101848)
chr4 (463-548)||(25478290-25478375)
chr4 (463-548)||(18033005-18033089)
chr4 (222-318)||(13767497-13767593)
chr4 (463-548)||(36855157-36855241)
chr4 (463-548)||(42419465-42419549)
chr4 (310-369)||(46823337-46823396)
chr4 (204-306)||(13767686-13767787)
chr4 (256-352)||(32383810-32383907)
chr4 (463-548)||(12834899-12834983)
chr4 (223-288)||(29004321-29004386)
chr4 (463-545)||(19549710-19549791)
chr4 (204-273)||(550316-550386)
chr4 (204-265)||(45919500-45919561)
chr4 (463-492)||(50696704-50696733)
chr4 (204-244)||(21825174-21825214)
[»] chr2 (34 HSPs)
chr2 (204-368)||(2054983-2055147)
chr2 (204-369)||(863863-864028)
chr2 (204-369)||(36150998-36151163)
chr2 (217-369)||(36150338-36150490)
chr2 (204-369)||(863196-863360)
chr2 (204-365)||(8043705-8043866)
chr2 (204-369)||(34452239-34452404)
chr2 (204-369)||(2054345-2054509)
chr2 (204-369)||(34452907-34453071)
chr2 (215-369)||(37875391-37875545)
chr2 (204-365)||(37876053-37876215)
chr2 (246-369)||(27006284-27006407)
chr2 (254-368)||(8043081-8043195)
chr2 (204-337)||(39830738-39830866)
chr2 (235-361)||(7498218-7498344)
chr2 (204-306)||(24433332-24433434)
chr2 (204-288)||(19911108-19911193)
chr2 (204-300)||(38985979-38986075)
chr2 (223-319)||(38986802-38986898)
chr2 (215-352)||(7486811-7486949)
chr2 (204-306)||(27059166-27059267)
chr2 (204-306)||(27059977-27060079)
chr2 (204-300)||(24429608-24429703)
chr2 (463-548)||(37875639-37875723)
chr2 (463-542)||(36150584-36150662)
chr2 (463-548)||(34452498-34452582)
chr2 (463-548)||(8043290-8043374)
chr2 (204-258)||(2868668-2868721)
chr2 (463-545)||(863454-863535)
chr2 (204-274)||(8911833-8911903)
chr2 (463-548)||(27006107-27006190)
chr2 (500-548)||(2054835-2054883)
chr2 (204-274)||(42849495-42849565)
chr2 (204-244)||(20203327-20203367)
[»] chr5 (31 HSPs)
chr5 (215-369)||(25836511-25836665)
chr5 (204-369)||(492037-492201)
chr5 (204-369)||(14481361-14481525)
chr5 (215-369)||(9918384-9918538)
chr5 (204-369)||(3259709-3259873)
chr5 (204-369)||(3259062-3259226)
chr5 (204-369)||(15883155-15883320)
chr5 (204-369)||(36038486-36038651)
chr5 (204-369)||(4737704-4737870)
chr5 (219-369)||(9917733-9917883)
chr5 (219-369)||(15915716-15915866)
chr5 (219-368)||(10394766-10394915)
chr5 (204-369)||(14480738-14480903)
chr5 (204-369)||(490903-491069)
chr5 (222-369)||(25835861-25836008)
chr5 (204-369)||(4737034-4737199)
chr5 (222-369)||(10394112-10394259)
chr5 (215-369)||(12281107-12281261)
chr5 (215-369)||(15915084-15915238)
chr5 (233-369)||(12281764-12281900)
chr5 (463-545)||(12281355-12281436)
chr5 (466-548)||(491168-491249)
chr5 (463-548)||(3259551-3259635)
chr5 (463-548)||(4737526-4737610)
chr5 (463-548)||(10394587-10394671)
chr5 (500-548)||(14481022-14481070)
chr5 (204-274)||(23206191-23206261)
chr5 (463-492)||(15915332-15915361)
chr5 (500-548)||(9918208-9918256)
chr5 (204-244)||(11768830-11768870)
chr5 (206-274)||(21145927-21145995)
[»] chr1 (36 HSPs)
chr1 (218-369)||(23601739-23601890)
chr1 (219-368)||(24081458-24081607)
chr1 (204-369)||(48644732-48644897)
chr1 (216-369)||(51661258-51661411)
chr1 (214-369)||(24082098-24082253)
chr1 (215-369)||(23173942-23174095)
chr1 (219-369)||(31151335-31151485)
chr1 (219-368)||(23173288-23173437)
chr1 (204-369)||(31150667-31150832)
chr1 (204-369)||(39870052-39870217)
chr1 (204-368)||(48577458-48577621)
chr1 (222-369)||(39870712-39870859)
chr1 (204-369)||(51660592-51660755)
chr1 (204-341)||(23602367-23602505)
chr1 (295-368)||(18249214-18249287)
chr1 (204-306)||(4595540-4595642)
chr1 (219-306)||(40959736-40959823)
chr1 (219-306)||(4594710-4594797)
chr1 (463-548)||(23173763-23173848)
chr1 (219-306)||(40958891-40958978)
chr1 (463-542)||(23602222-23602300)
chr1 (463-548)||(18249004-18249088)
chr1 (463-548)||(24081702-24081786)
chr1 (463-548)||(51661080-51661164)
chr1 (222-302)||(50505366-50505446)
chr1 (203-274)||(21791478-21791548)
chr1 (463-548)||(31151157-31151241)
chr1 (204-274)||(5216550-5216620)
chr1 (204-244)||(14886141-14886181)
chr1 (204-308)||(16317541-16317645)
chr1 (500-548)||(48577085-48577133)
chr1 (204-274)||(21790739-21790809)
chr1 (209-287)||(44672106-44672184)
chr1 (463-492)||(39870311-39870340)
chr1 (204-244)||(5496534-5496574)
chr1 (204-244)||(17606252-17606292)
[»] chr6 (19 HSPs)
chr6 (218-369)||(24063679-24063830)
chr6 (214-369)||(34713259-34713414)
chr6 (225-369)||(5114213-5114357)
chr6 (204-369)||(18969751-18969915)
chr6 (204-368)||(18969100-18969264)
chr6 (235-369)||(24063039-24063173)
chr6 (204-306)||(1370149-1370250)
chr6 (204-300)||(1371023-1371119)
chr6 (463-548)||(34713080-34713165)
chr6 (463-542)||(24063267-24063346)
chr6 (223-288)||(10788965-10789030)
chr6 (501-548)||(5121016-5121063)
chr6 (219-274)||(32907431-32907486)
chr6 (222-296)||(4620870-4620944)
chr6 (205-274)||(18649895-18649964)
chr6 (204-244)||(8992896-8992936)
chr6 (204-244)||(9017343-9017383)
chr6 (463-492)||(5114420-5114449)
chr6 (208-308)||(35073373-35073473)
[»] scaffold0050 (1 HSPs)
scaffold0050 (204-365)||(8401-8561)
[»] scaffold1339 (1 HSPs)
scaffold1339 (204-308)||(1906-2009)
[»] scaffold0093 (2 HSPs)
scaffold0093 (204-306)||(21944-22046)
scaffold0093 (219-306)||(22732-22819)
[»] scaffold0009 (1 HSPs)
scaffold0009 (204-274)||(105500-105569)


Alignment Details
Target: chr7 (Bit Score: 150; Significance: 5e-79; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 229679 - 229478
Alignment:
Q  1 agtaagagagttgtgaatgttagggggaatatgaaacacctcacaaagggg-aggtccacaccagctatcagtctagaacttgatattttccccatttcc 99  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||||||| |||||||||||||||||||||||||    
T  229679 agtaagagagttgtgaatgttagggcgaatatgaaacacctcacaaagggggaggcccacaccaactatcagtccagaacttgatattttccccatttcc 229580  T
Q  100 taacaaaaatgtggaattctcacgaattgtggtatattcacttttgacactgctcgaaattgaggaagaaacatgatgagcaatatgtctcctatctctg 199  Q
    ||||||| |||||||||||||| ||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| ||||    
T  229579 taacaaacatgtggaattctcatgaaatgtggtatattcacttttgacattgctccaaattgaggaagaaacatgatgaacaatatgtctcctatatctg 229480  T
Q  200 ag 201  Q
    ||    
T  229479 ag 229478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 219 - 368
Target Start/End: Complemental strand, 24307158 - 24307009
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 318  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24307158 taggatcaaatgacaccatgatgtcaaaattagtttgacatcaaatctcatccattcatttcatttaatccaaaggtttaaaactatcaccaaattaatt 24307059  T
Q  319 aatatacaccaaatactctctatcacctaattaagaaacatatctatcat 368  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24307058 aatatacatcaaatactctctatcacctaattaagaaacatatctatcat 24307009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 30469503 - 30469339
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||    
T  30469503 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacatcaaatcttatccattcatttcatttaatccaaaggcttagaact 30469405  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  30469404 atcaccaaattaattaacatacatcaaatactctctatcacctaattaagaaacatatctatcatc 30469339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 32022728 - 32022563
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||| || ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  32022728 atatatatatagggatatgatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 32022629  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  32022628 atcaccaaattaattaatatacatcaaataatctctatcacctaattaagaaacatatctatcatc 32022563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 204 - 368
Target Start/End: Complemental strand, 42490038 - 42489874
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||| | ||| |||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| |    
T  42490038 atatatatctagggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaggtttaaaatt 42489939  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcat 368  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  42489938 atcaccaaattaattaatatacaccaaatactctctatcaccaaattaagaaacatatctatcat 42489874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 219 - 369
Target Start/End: Original strand, 24306353 - 24306503
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 318  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||    
T  24306353 taggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaagcttaaaactatcaccaaattaatt 24306452  T
Q  319 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24306453 aacatacatcaaatactctctatcacctaattaagaaacatatctatcatc 24306503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 36784580 - 36784415
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||| ||||||||||||| |||||||||||| ||||||||||||| |||||||||||||| |||||||||||||| ||||| ||| ||||    
T  36784580 atatatatatagggataggatcaaatgataccatggtgtcaaaattagtttgacaccaaatcttatccatccatttcatttaatccaaaggcttagaact 36784481  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36784480 atcaccaaattaattaacatacatcaaatactctctatcacctaattaagaaacatatctatcatc 36784415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 30001793 - 30001957
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||| ||||||||    
T  30001793 atatatatatgggat-aggatcaaatgacactatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttcatccaaaggcttaaaact 30001891  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||    
T  30001892 atcaccaaattaattaacatacatcaaatactctctatcacctaattaagaaacatatttatcatc 30001957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 30002624 - 30002459
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||    
T  30002624 atatatatatatagttaggatcaaatgacaccatggtgtcaaaattagtttgacatcaaatctcatccattcattttatttaatccaaaggcttaaaact 30002525  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||| ||| ||||||||||||    
T  30002524 atcaccaaattaattaatatacaccaaatactctcaatcgcctaattaaaaaaaatatctatcatc 30002459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 32021212 - 32021376
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||    
T  32021212 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttacccattcatttcatttaatccaaaggcttaaaact 32021310  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  32021311 atcaccaaattaattaacatacatcaaatactctctatcatctaatcaagaaacatatctatcatc 32021376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 36783749 - 36783913
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| ||||| | |||| ||||||| |||||||| ||||| ||||||||    
T  36783749 atatatatatggg-ttaggatcaaatgataccatggtgtcaaaattagtttgacaccaaatttcatcctttcattttatttaatccaaaggcttaaaact 36783847  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36783848 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaaaatatctatcatc 36783913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 204 - 368
Target Start/End: Complemental strand, 37706387 - 37706224
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||||| |||||||| ||||| ||||||||    
T  37706387 atatatatatggg-ttaggatcaaatgacactatggtgtcaaaattagtttgacaccaaatctcatccattcatttaatttaatccaaaggcttaaaact 37706289  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcat 368  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  37706288 atcaccaaattaattaatataaaccaaatactctctatcacctaattaagaaaaataactatcat 37706224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 223 - 369
Target Start/End: Original strand, 42489222 - 42489368
Alignment:
Q  223 atcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaata 322  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||| |    
T  42489222 atcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttattcattcatttcatttaatccaaaggcttaaaactatcaccaaattaattaaca 42489321  T
Q  323 tacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||||    
T  42489322 tacatcaaatactctctatcacctgattaagaaacatatatatcatc 42489368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 217 - 369
Target Start/End: Original strand, 30468695 - 30468847
Alignment:
Q  217 gttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaa 316  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||  ||||||| |||||||| ||||| |||||||||||||||||||||    
T  30468695 gttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatcatttcattttatttaatccaaaggcttaaaactatcaccaaattaa 30468794  T
Q  317 ttaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| | |||||||||||||||||||| ||||||||||||    
T  30468795 ttaatatacaccaaatattttctatcacctaattaagaaaaatatctatcatc 30468847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 30471071 - 30470970
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||  ||||||||  ||||||||||||||    
T  30471071 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatcacatttaattcaaaggtttaaaact 30470973  T
Q  304 atc 306  Q
    |||    
T  30470972 atc 30470970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 306
Target Start/End: Original strand, 30470127 - 30470204
Alignment:
Q  229 tgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatc 306  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||  |||||||| ||||||||||| |||||    
T  30470127 tgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattatatttaatccaaaggtttaaagctatc 30470204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 302 - 369
Target Start/End: Original strand, 26928582 - 26928649
Alignment:
Q  302 ctatcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| ||||||| |||||||| |||||||    
T  26928582 ctatcaccaaattaattaacatacatcaaatactctctatcacttaattaaaaaacatatatatcatc 26928649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 24306914 - 24306830
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||| ||||||||||       ||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  24306914 tataatcatactcaaactttttttctaaactttttt-ataaaatgaatggttgaactcatatacctatggttgtttgagtcatcat 24306830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 463 - 548
Target Start/End: Original strand, 30468938 - 30469022
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||||||||||||||       ||||||| |||||| ||||||||||| ||||| ||||||||||||||||    
T  30468938 tataatcatactcaaacttcttttctaaactttttt-ataaaatgaatggttgaactcatatagctatggttgtttgagtcatcat 30469022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 42489779 - 42489695
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||| ||||||||||       ||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  42489779 tataatcatactcaaactttttttctaaactttttt-ataaaatgaatggttgaactcatatacctatggttgtttgagtcatcat 42489695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 30002365 - 30002281
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||||||||||||||       ||||||| ||||||  |||||||||||||||| |||||||||| |||||    
T  30002365 tataatcatactcaaacttcttttctaaac-ttttttataaaatgaatggtttaactcatatacctatggttgtttgagttatcat 30002281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 548
Target Start/End: Original strand, 32022152 - 32022236
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||| ||||||||||       ||||||| |||||| ||||||||| ||||||| ||||||||||||||||    
T  32022152 tataatcatactcaaactttttttctaaactttttt-ataaaatgaatggttgaactcatacacctatggttgtttgagtcatcat 32022236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 548
Target Start/End: Original strand, 36784007 - 36784091
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||| ||||||||||||||||||||       ||||||| |||||| |||||||||||| |||| ||||||||||||||||    
T  36784007 tataatcattctcaaacttcttttctaaactttttt-ataaaatgaatggttgaactcatatacttatggttgtttgagtcatcat 36784091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 276
Target Start/End: Complemental strand, 21415461 - 21415389
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattca 276  Q
    |||||||||| |||||||||||||||||||||| ||||||| | | | | ||||| ||||||| |||||||||    
T  21415461 atatatatatagggttaggatcaaatgacaccaaggtgtcaaattaaatatgacaccaaatctcatccattca 21415389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 302
Target Start/End: Original strand, 3219294 - 3219391
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaac 302  Q
    ||||||||||||| ||||||||||||||||||| ||||||| | | | | |||||  |||||| ||||||||| ||  ||||||| ||||| |||||||    
T  3219294 atatatatatggg-ttaggatcaaatgacaccaaggtgtcaaattaaatatgacactaaatctcatccattcaatttgtttaatctaaaggcttaaaac 3219391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 274
Target Start/End: Original strand, 30659844 - 30659914
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 274  Q
    |||||||||| ||| |||||||||||||||||||||||||| | | | ||||||| |||||| || |||||    
T  30659844 atatatatatagggataggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcataaccatt 30659914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 31179985 - 31179915
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 274  Q
    |||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| ||||||||| |||||    
T  31179985 atatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcttaaccatt 31179915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 274
Target Start/End: Original strand, 43334119 - 43334189
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 274  Q
    ||||||||||  || |||||||||||||||||| ||||||| | | |||||||||||||||| || |||||    
T  43334119 atatatatatatggataggatcaaatgacaccaaggtgtcaaattaagtttgacatcaaatcataaccatt 43334189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 274
Target Start/End: Original strand, 38059835 - 38059906
Alignment:
Q  203 aatatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 274  Q
    ||||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| |||||| || |||||    
T  38059835 aatatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctagccatt 38059906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 274
Target Start/End: Original strand, 3162858 - 3162928
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 274  Q
    |||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| |||||| || |||||    
T  3162858 atatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctaaccatt 3162928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 3163563 - 3163494
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 274  Q
    ||||||||||||| | ||||||||||||||||||||||||| | | | ||||||| |||||| || |||||    
T  3163563 atatatatatgggat-aggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcataaccatt 3163494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 206 - 244
Target Start/End: Complemental strand, 46428183 - 46428145
Alignment:
Q  206 atatatatggggttaggatcaaatgacaccatggtgtca 244  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  46428183 atatatatagggataggatcaaatgacaccatggtgtca 46428145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 8513530 - 8513469
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatc 265  Q
    |||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| ||||||    
T  8513530 atatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 8513469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 3e-74; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 16303455 - 16303290
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  16303455 atatatatatagggttaggatcaaatgacatcatggtgtcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaggtttaaaact 16303356  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16303355 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 16303290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 46889332 - 46889167
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  46889332 atatatatatagggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaggtttaaaact 46889233  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46889232 atcatcaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 46889167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 205 - 368
Target Start/End: Original strand, 46914962 - 46915124
Alignment:
Q  205 tatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaacta 304  Q
    |||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||    
T  46914962 tatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaggtttaaaacta 46915060  T
Q  305 tcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcat 368  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  46915061 tcaccaaattaattaatatacaccaaatactctctatcacataattaagaaatatatctatcat 46915124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 205 - 368
Target Start/End: Complemental strand, 50802653 - 50802491
Alignment:
Q  205 tatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaacta 304  Q
    |||||||||||| | |||||||| |||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||    
T  50802653 tatatatatgggat-aggatcaattgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaggtttaaaacta 50802555  T
Q  305 tcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcat 368  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  50802554 tcaccaaattaattaatatacaccaaatattctctatcacctaattaagaaacatatctatcat 50802491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 205 - 368
Target Start/End: Original strand, 50873224 - 50873386
Alignment:
Q  205 tatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaacta 304  Q
    |||||||||||| | |||||||| |||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||    
T  50873224 tatatatatgggat-aggatcaattgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaggtttaaaacta 50873322  T
Q  305 tcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcat 368  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  50873323 tcaccaaattaattaatatacaccaaatattctctatcacctaattaagaaacatatctatcat 50873386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 222 - 368
Target Start/End: Original strand, 37986421 - 37986567
Alignment:
Q  222 gatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaat 321  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37986421 gatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaggtttaaaactatcaccaaattaattaat 37986520  T
Q  322 atacaccaaatactctctatcacctaattaagaaacatatctatcat 368  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  37986521 atacaacaaatactctctatcacctaattaagaaacatatctatcat 37986567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 219 - 369
Target Start/End: Complemental strand, 37987223 - 37987073
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 318  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||    
T  37987223 taggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatctaaaggcttaaaactatcaccaaattagtt 37987124  T
Q  319 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37987123 aatatacaccaaatattctctatcacctaattaagaaacatatctatcatc 37987073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 16302623 - 16302787
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||    
T  16302623 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaattttatccattcatttcatttaatccaaaggcttaaaact 16302721  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16302722 atcaccaaattaattaacatacatcaaatactctctatcacctaattaagaaacatatctatcatc 16302787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 46915791 - 46915627
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  46915791 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 46915693  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||| |||||||    
T  46915692 atcaccaaattaattaacatacatcaaatattctctatcacctaattaagaaacatatttatcatc 46915627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 219 - 361
Target Start/End: Original strand, 46888480 - 46888622
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 318  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  46888480 taggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaactatcaccaaattaatt 46888579  T
Q  319 aatatacaccaaatactctctatcacctaattaagaaacatat 361  Q
    || ||||| |||||| |||||||||||||||||||||||||||    
T  46888580 aacatacatcaaatattctctatcacctaattaagaaacatat 46888622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 50801822 - 50801987
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||| || ||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||  ||||||||||||||    
T  50801822 atatatatatagggatatgatcaaatgacaccatggtgtcaaaattagtttgacaccgaatcttatccattcatttcatttaattcaaaggtttaaaact 50801921  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||  ||||| |||||||||| |||||||||||||||||| ||||||||||||    
T  50801922 atcaccaaattaattatgatacatcaaatactctatatcacctaattaagaaatatatctatcatc 50801987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 50874058 - 50873893
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||| || ||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||  ||||||||||||||    
T  50874058 atatatatatagggatatgatcaaatgacaccatggtgtcaaaattagtttgacaccgaatcttatccattcatttcatttaattcaaaggtttaaaact 50873959  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||  ||||| |||||||||| |||||||||||||||||| ||||||||||||    
T  50873958 atcaccaaattaattatgatacatcaaatactctatatcacctaattaagaaatatatctatcatc 50873893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 219 - 369
Target Start/End: Complemental strand, 13644172 - 13644022
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 318  Q
    ||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  13644172 taggatcaaatgataccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaactatcaccaaattaatt 13644073  T
Q  319 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    || || || ||||||||||||||||||||||||||||| |||| |||||||    
T  13644072 aacatgcatcaaatactctctatcacctaattaagaaatatatttatcatc 13644022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 252 - 352
Target Start/End: Complemental strand, 18347085 - 18346985
Alignment:
Q  252 tttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaatatacaccaaatactctctatcacctaatta 351  Q
    ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||    
T  18347085 tttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaactatcaccaaattaattaacatacatcaaatactctctatcaccaaatta 18346986  T
Q  352 a 352  Q
    |    
T  18346985 a 18346985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 219 - 319
Target Start/End: Complemental strand, 16854694 - 16854594
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 318  Q
    ||||||||||||||| |||||||||| ||||||||||||| ||||||| ||||||||||  ||||||||| |||||||||||||||||  |||| |||||    
T  16854694 taggatcaaatgacatcatggtgtcaaaattagtttgacaccaaatctcatccattcatcacatttaatccaaaggtttaaaactatctacaaaataatt 16854595  T
Q  319 a 319  Q
    |    
T  16854594 a 16854594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 302 - 369
Target Start/End: Complemental strand, 18346999 - 18346932
Alignment:
Q  302 ctatcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||    
T  18346999 ctatcaccaaattaattaacatacatcaaatactctctatcacctaattaagaaacatatttatcatc 18346932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 50802396 - 50802312
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||| ||||||||||       |||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  50802396 tataatcatactcaaactttttttctaaactttttt-ataaaataaatggttgaactcatatacctatggttgtttgagtcatcat 50802312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 463 - 548
Target Start/End: Original strand, 50873481 - 50873565
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||| ||||||||||       |||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  50873481 tataatcatactcaaactttttttctaaactttttt-ataaaataaatggttgaactcatatacctatggttgtttgagtcatcat 50873565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 16303196 - 16303112
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||| ||||||||||       ||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  16303196 tataatcatactcaaactttttttctaaactttttt-ataaaatgaatggttgaactcatatacctatggttgtttgagtcatcat 16303112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 548
Target Start/End: Original strand, 37986662 - 37986746
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||| ||||||||||       ||||||| |||||| ||||||||||||||||  ||||||||||||||||    
T  37986662 tataatcatactcaaactttttttctaaactttttt-ataaaatgaatggttgaactcatatacctatagttgtttgagtcatcat 37986746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 308
Target Start/End: Complemental strand, 7253315 - 7253229
Alignment:
Q  222 gatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcac 308  Q
    ||||||||||||||||||||||| | | | | ||||| ||||||||||||||| | ||  ||||||| ||||| ||||||| |||||    
T  7253315 gatcaaatgacaccatggtgtcaaattaaatgtgacaccaaatcttatccatttaatttgtttaatccaaaggcttaaaacaatcac 7253229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 54584945 - 54584877
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccat 273  Q
    ||||||||||||| | ||||||||||||||||||||||||| | | | ||| ||||||||||||| ||||    
T  54584945 atatatatatgggat-aggatcaaatgacaccatggtgtcaaactaaatttaacatcaaatcttaaccat 54584877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 500 - 548
Target Start/End: Complemental strand, 46889005 - 46888957
Alignment:
Q  500 ataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||| |||||| ||||||||||||||||| ||||||| ||||||||    
T  46889005 ataaaatgaatggttgaactcatatacctatggttgtttgcgtcatcat 46888957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 53948651 - 53948719
Alignment:
Q  206 atatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 274  Q
    |||||||| ||| |||||||||||||||||||||||||| | | | ||||||| |||||| || |||||    
T  53948651 atatatatagggataggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcataaccatt 53948719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 20200675 - 20200605
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 274  Q
    |||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| |||||| || |||||    
T  20200675 atatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctagccatt 20200605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 20202859 - 20202789
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 274  Q
    |||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| |||||| || |||||    
T  20202859 atatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctagccatt 20202789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 53950144 - 53950074
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 274  Q
    |||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| |||||| || |||||    
T  53950144 atatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctagccatt 53950074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 8e-72; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 24023087 - 24022923
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  24023087 atatatatatggg-ttaggatcaaatgacaccatggtgtcaaaattagtttgacaacaaatctcatccattcatttcatttaatccaaaggtttaaaact 24022989  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24022988 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaagcatatctatcatc 24022923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 20054258 - 20054423
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| ||| | ||||||||| ||||||||||||| ||||| ||||||||    
T  20054258 atatatatatagggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaacttttatccatttatttcatttaatccaaaggcttaaaact 20054357  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||    
T  20054358 atcaccaaattaattaacatacatcaaatactctctatcacctaattaagaaacatatttatcatc 20054423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 216 - 369
Target Start/End: Original strand, 41272966 - 41273119
Alignment:
Q  216 ggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaatta 315  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||| |||| ||||||| |||||||  ||||| ||||||||||||||||||||    
T  41272966 ggttaggatcaaatgacaccatggtgttaaaattagtttgacatcaaatctcatcccttcattttatttaattcaaaggcttaaaactatcaccaaatta 41273065  T
Q  316 attaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  41273066 attaatatacaccaaatactctctatcacctaattaagaaaaatatctatcatc 41273119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 205 - 369
Target Start/End: Original strand, 34654192 - 34654356
Alignment:
Q  205 tatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaacta 304  Q
    |||||||||  || |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||  |||||| ||    
T  34654192 tatatatataaggataggatcaaatgacaccatggtgtcaaaattagtttgacagcaaatcttatccattcatttcatttaatccaaagacttaaaatta 34654291  T
Q  305 tcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||    
T  34654292 tcaccaaattaattaatatacacaaaatactctctatcacctaattaaaaaaaatatctatcatc 34654356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 34654984 - 34654824
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||   |||||| |||||||||| |||||||||||||||||| ||||  ||||||||    
T  34654984 atatatatatgggat-aggatcaaatgacaccatggtgtca-aatt---ttgacaccaaatcttattcattcatttcatttaatccaaagtcttaaaact 34654890  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  34654889 atcaccaaattaattaacatacaccaaatactctttatcacctaattaagaaacatatctatcatc 34654824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 219 - 369
Target Start/End: Complemental strand, 14763379 - 14763229
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 318  Q
    |||||||||||||||  ||| ||||| ||| ||||||||| |||||||||||||||||||| |||||||| ||||| ||||| |||||||||||||||||    
T  14763379 taggatcaaatgacattatgatgtcaaaataagtttgacaccaaatcttatccattcattttatttaatctaaaggcttaaagctatcaccaaattaatt 14763280  T
Q  319 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14763279 aacatacatcaaatactctctatcacctaattaagaaacatatctatcatc 14763229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 218 - 352
Target Start/End: Complemental strand, 41273837 - 41273703
Alignment:
Q  218 ttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaat 317  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||| |||| ||||||| |||||||| ||||| ||||||||||||||||||||||    
T  41273837 ttaggatcaaatgacaccatggtgtcaaaattagtttgacattaaatctcatcccttcattttatttaatccaaaggcttaaaactatcaccaaattaat 41273738  T
Q  318 taatatacaccaaatactctctatcacctaattaa 352  Q
    ||||||||| |||||||||||||||||||||||||    
T  41273737 taatatacatcaaatactctctatcacctaattaa 41273703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 204 - 350
Target Start/End: Complemental strand, 20055048 - 20054903
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | | ||||||||||||||||||||||| ||||||||| ||| | ||||| ||||||||||||||||||||| ||| ||||||||||    
T  20055048 atatatatatgggat-atgatcaaatgacaccatggtgtcaaaattagttttacagcgaatctcatccattcatttcatttaatccaaaagtttaaaact 20054950  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaatt 350  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||    
T  20054949 atcaccaaattaattaacatacaccaaatactatctatcacctaatt 20054903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 204 - 319
Target Start/End: Complemental strand, 3583708 - 3583593
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||  ||||||||| ||||||||||||||    
T  3583708 atatatatatagggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatcacatttaatccaaaggtttaaaact 3583609  T
Q  304 atcaccaaattaatta 319  Q
    |||  |||| ||||||    
T  3583608 atccacaaaataatta 3583593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 204 - 319
Target Start/End: Complemental strand, 3583357 - 3583242
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||  ||||||||| ||||||||||||||    
T  3583357 atatatatatagggataggatcaaatgacaccatggtgtcaaaattaatttgacaccaaatctcatccattcatcacatttaatccaaaggtttaaaact 3583258  T
Q  304 atcaccaaattaatta 319  Q
    |||  |||| ||||||    
T  3583257 atctacaaaataatta 3583242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 29267934 - 29268035
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||  ||||||||| ||||||||||||||    
T  29267934 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatcacatttaatccaaaggtttaaaact 29268032  T
Q  304 atc 306  Q
    |||    
T  29268033 atc 29268035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 204 - 300
Target Start/End: Complemental strand, 29268881 - 29268785
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaa 300  Q
    |||||||||| | | || ||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||  |||||||| |||||||||||    
T  29268881 atatatatatagagatatgatcaaatgacaccatggtgtcaaaattaatttgacatcaaatctcatccattcattatatttaatccaaaggtttaaa 29268785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 219 - 300
Target Start/End: Original strand, 16846817 - 16846898
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaa 300  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||  ||| |||  |||||||||||    
T  16846817 taggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcattatattcaattcaaaggtttaaa 16846898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 204 - 319
Target Start/End: Complemental strand, 16847738 - 16847624
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||| ||| |||||   ||||||||| ||| |||||||| |    
T  16847738 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatctattcaacacatttaatccaaatgtttaaaatt 16847640  T
Q  304 atcaccaaattaatta 319  Q
    |||  |||| ||||||    
T  16847639 atccacaaaataatta 16847624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 204 - 300
Target Start/End: Original strand, 3582422 - 3582518
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatt-tcatttaatcgaaaggtttaaa 300  Q
    ||||||||||||| | | |||||||||||| |||||||||| ||||||||||||| |||||||||| |||||||| | | |||||| |||||||||||    
T  3582422 atatatatatgggat-atgatcaaatgacatcatggtgtcaaaattagtttgacaccaaatcttattcattcattattaattaatccaaaggtttaaa 3582518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 20054835 - 20054751
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||| ||||||||||       ||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  20054835 tataatcatactcaaactttttttctaaactttttt-ataaaatgaatggttgaactcatatacctatggttgtttgagtcatcat 20054751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 204 - 299
Target Start/End: Original strand, 14754163 - 14754256
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaa 299  Q
    |||||||||| ||| || |||||||||||||  |||||||| ||||||||||||| ||||||| ||| |||||||  |||||||| |||| |||||    
T  14754163 atatatatatagggatatgatcaaatgacac--tggtgtcaaaattagtttgacaccaaatctaatctattcattatatttaatccaaagatttaa 14754256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 41273400 - 41273316
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    |||||||| | |||||||||||||||||||       ||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  41273400 tataatcacagtcaaacttcttttctaaactttttt-ataaaatgaatggttgaactcatatacctatggttgtttgagtcatcat 41273316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 500 - 548
Target Start/End: Original strand, 34654488 - 34654536
Alignment:
Q  500 ataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  34654488 ataaaatgaatggttgaactcatatacctatgattgtttgagtcatcat 34654536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 10092908 - 10092977
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccat 273  Q
    |||||||||| ||| || ||||||||||| ||||||||||| | | | ||||||||||||||||| ||||    
T  10092908 atatatatatagggatatgatcaaatgacgccatggtgtcaaactaaatttgacatcaaatcttaaccat 10092977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 492
Target Start/End: Original strand, 41273213 - 41273242
Alignment:
Q  463 tataatcatactcaaacttcttttctaaac 492  Q
    ||||||||||||||||||||||||||||||    
T  41273213 tataatcatactcaaacttcttttctaaac 41273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 5881132 - 5881172
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtca 244  Q
    |||||||||| ||| |||||||||||||||||| |||||||    
T  5881132 atatatatatagggataggatcaaatgacaccaaggtgtca 5881172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 3e-71; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 204 - 368
Target Start/End: Original strand, 6784830 - 6784994
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  6784830 atatatatatagggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaggtttaaaact 6784929  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcat 368  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6784930 atcaccaaattaattaatatacaccaaatattctctatcacctaattaagaaacatatctatcat 6784994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 204 - 368
Target Start/End: Complemental strand, 42419775 - 42419612
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| ||||| ||||||||    
T  42419775 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaggcttaaaact 42419677  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcat 368  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42419676 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcat 42419612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 19549451 - 19549616
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||| ||||| ||||||||    
T  19549451 atatatatatagggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattttatttaatctaaaggcttaaaact 19549550  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  19549551 atcaccaaattaattaatatacaccaaatactctctgtcacctaattaagaaaaatatctatcatc 19549616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 219 - 369
Target Start/End: Complemental strand, 19550277 - 19550127
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 318  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  19550277 taggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaactatcaccaaattaatt 19550178  T
Q  319 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19550177 aacatacatcaaatactctctatcacctaattaagaaacatatctatcatc 19550127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 25236377 - 25236542
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||||||||||||||||||| |||||||||| |||||||||||||  |||| |||||||||||||| |||||||| ||||| ||||||||    
T  25236377 atatatatatagggttaggatcaaatgacatcatggtgtcaaaattagtttgacactaaatattatccattcattttatttaatccaaaggcttaaaact 25236476  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  25236477 atcaccaaattaattaacatacaccaaatactctctatcacctaattaagaaacatatttatcatc 25236542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 42418974 - 42419139
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||| |||| ||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  42418974 atatacatatagggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 42419073  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||||    
T  42419074 atcaccaaattaattaacatacatcaaatactctctatcacttaattaagaaacatatatatcatc 42419139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 219 - 369
Target Start/End: Original strand, 36854913 - 36855063
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 318  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| |||||||| ||||| |||||||||||||||||||||||    
T  36854913 taggatcaaatgacaccatggtgtcaaaattagtttgacatcaaatctcatcccttcattttatttaatccaaaggcttaaaactatcaccaaattaatt 36855012  T
Q  319 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  36855013 aatatacaccaaatactctctatcacttaattaagaaaaatatctatcatc 36855063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 12834408 - 12834573
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||| |||||  |||||||||||||||||||||| ||||| ||||||||    
T  12834408 atatatatatagggataggatcaaatgacactatggtgtcaaaattagtttgacaccaaattatatccattcatttcatttaatccaaaggcttaaaact 12834507  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  12834508 atcaccaaattaattaacatacatcaaatactccctatcacctaattaagaaacatatctatcatc 12834573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 25478864 - 25478699
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||||||||||||||||| | |||| ||||| ||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||||    
T  25478864 atatatatatagggttaggatcaaatgatatcatgttgtcaaaattagtttgacaccaaatcttatctattcatttcatttaatccaaaggcttaaaact 25478765  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25478764 atcaccaaattaattatcatacaccaaatactctctatcacttaattaagaaacatatctatcatc 25478699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 204 - 365
Target Start/End: Complemental strand, 36855731 - 36855571
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||||    
T  36855731 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatcaattcatttcatttaatccaaaggcttaaaact 36855633  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctat 365  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||    
T  36855632 atcaccaaattaattaacatacatcaaatactccctatcacctaattaagaaacatatctat 36855571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 215 - 369
Target Start/End: Original strand, 18032757 - 18032911
Alignment:
Q  215 gggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaatt 314  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||| |||| ||||||| |||||||| ||||| |||||||||||||||||||    
T  18032757 gggttaggatcaaatgacaccatggtgtcaaaattagtttgacacgaaatctcatcccttcattttatttaatccaaaggcttaaaactatcaccaaatt 18032856  T
Q  315 aattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  18032857 aattaatatacaccaaatactctctatcacttaattaagaaaaatatctatcatc 18032911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 12835241 - 12835077
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||| |||||||  ||| | ||||||||    
T  12835241 atatatatatggg-ttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatcccttcattttatttaattcaaatgcttaaaact 12835143  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12835142 gtcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaaaatatctatcatc 12835077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 25478066 - 25478227
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  25478066 atatatatatggg-ttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 25478164  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||| ||||||||||  |||||||||||||||| |||   |||||| ||||||||||||||||||    
T  25478165 atcactaaattaattatcatacaccaaatactctatat---ctaattgagaaacatatctatcatc 25478227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 214 - 369
Target Start/End: Original strand, 50696183 - 50696338
Alignment:
Q  214 ggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaat 313  Q
    |||| ||||||||||||||||| |||||||| |||||||||||||  |||| ||||| ||||||||||||||||| ||||| |||||||||||| ||| |    
T  50696183 ggggataggatcaaatgacaccttggtgtcaaaattagtttgacactaaattttatcaattcatttcatttaatccaaaggcttaaaactatcatcaact 50696282  T
Q  314 taattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  50696283 taattaacatacatcaaatactctctatcacctaattaagaaacatatctatcatc 50696338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 215 - 365
Target Start/End: Complemental strand, 50696981 - 50696831
Alignment:
Q  215 gggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaatt 314  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||| |||||||| ||||  |||||||||||| ||||||    
T  50696981 gggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatcccttcattttatttaatccaaagacttaaaactatcatcaaatt 50696882  T
Q  315 aattaatatacaccaaatactctctatcacctaattaagaaacatatctat 365  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||    
T  50696881 aattaatatacaccaaatactttctatcacctatttaagaaaaatatctat 50696831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 246 - 369
Target Start/End: Complemental strand, 29101848 - 29101725
Alignment:
Q  246 aattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaatatacaccaaatactctctatcacc 345  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||  |||||||||||||||||||||||    
T  29101848 aattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaactatcaccaaattaattaacttacaccaaatactctctatcacc 29101749  T
Q  346 taattaagaaacatatctatcatc 369  Q
    |||||||||||||||| |||||||    
T  29101748 taattaagaaacatatttatcatc 29101725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 463 - 548
Target Start/End: Original strand, 25478290 - 25478375
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    |||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  25478290 tataatcatactcaaacttcttttctaaagtttttttataaaatgaatggtagaactcatatacatatggttgtttgagtcatcat 25478375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 463 - 548
Target Start/End: Original strand, 18033005 - 18033089
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||||||||||||||       ||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  18033005 tataatcatactcaaacttcttttctaaactttttt-ataaaatgaatggttgaactcatatacctatggttgtttgagtcatcat 18033089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 222 - 318
Target Start/End: Original strand, 13767497 - 13767593
Alignment:
Q  222 gatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 318  Q
    ||||||| ||||||||||||||| ||||| ||||||| |||| || || |||||  | ||||||||| ||||||||||| ||||||||||| |||||    
T  13767497 gatcaaaagacaccatggtgtcaaaattaatttgacaccaaaactaattcattcgatacatttaatccaaaggtttaaagctatcaccaaaataatt 13767593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 463 - 548
Target Start/End: Original strand, 36855157 - 36855241
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||||||||||||||       ||||||| |||||| |||||| |||||||||| ||||||||||||||||    
T  36855157 tataatcatactcaaacttcttttctaaactttttt-ataaaatgaatggttgaactcgtatacctatggttgtttgagtcatcat 36855241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 42419549 - 42419465
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||| ||||||||||       ||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  42419549 tataatcatactcaaactttttttctaaactttttt-ataaaatgaatggttgaactcatatacctatggttgtttgagtcatcat 42419465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 310 - 369
Target Start/End: Original strand, 46823337 - 46823396
Alignment:
Q  310 aaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||| |||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  46823337 aaattaattaacatacactaaatactgtctatcacctaattgagaaacatatctatcatc 46823396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 13767787 - 13767686
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||  || |||||| ||||||||||||| |||| || || |||||||| ||||||||  ||||||| ||||||    
T  13767787 atatatatatgggat-aggatcaaatgacaatatagtgtcaaaattagtttgacaccaaacctcattcattcattacatttaattcaaaggttaaaaact 13767689  T
Q  304 atc 306  Q
    |||    
T  13767688 atc 13767686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 32383907 - 32383810
Alignment:
Q  256 acatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaatatacaccaaatactct-ctatcacctaattaa 352  Q
    ||||||||||| |||||||  |||||||||||| || |  ||||||||||||  || ||||||||||||||||||||| | | |||||||||||||||    
T  32383907 acatcaaatctcatccatttgtttcatttaatctaatgacttaaaactatcattaagttaattaatatacaccaaatattttcctatcacctaattaa 32383810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 12834983 - 12834899
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||||||||||||||       || |||| |||||| ||||||||||||||||  ||||||||||||||||    
T  12834983 tataatcatactcaaacttcttttctaaactttttt-atgaaatgaatggttgaactcatatacctatagttgtttgagtcatcat 12834899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 223 - 288
Target Start/End: Complemental strand, 29004386 - 29004321
Alignment:
Q  223 atcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatc 288  Q
    |||||||||||||||| ||||| ||||||||||| |  |||| | |||||||||||||||||||||    
T  29004386 atcaaatgacaccatgatgtcaaaattagtttgatactaaatttcatccattcatttcatttaatc 29004321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 545
Target Start/End: Original strand, 19549710 - 19549791
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcat 545  Q
    |||||||||| ||||||||||||| |||||       ||||||| |||||| ||||||||||||||||| |||||||||||||    
T  19549710 tataatcatattcaaacttcttttttaaactttttt-ataaaatgaatggttgaactcatatacctatgattgtttgagtcat 19549791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 550386 - 550316
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataat-tagtttgacatcaaatcttatccat 273  Q
    |||||||||| ||| |||||||||||||||||||||||||| | |  | ||||||||||||||||| ||||    
T  550386 atatatatatagggataggatcaaatgacaccatggtgtcaaactaaattttgacatcaaatcttaaccat 550316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 45919500 - 45919561
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatc 265  Q
    |||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||||||||||    
T  45919500 atatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacatcaaatc 45919561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 492
Target Start/End: Complemental strand, 50696733 - 50696704
Alignment:
Q  463 tataatcatactcaaacttcttttctaaac 492  Q
    ||||||||||||||||||||||||||||||    
T  50696733 tataatcatactcaaacttcttttctaaac 50696704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 21825214 - 21825174
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtca 244  Q
    ||||||||||  || ||||||||||||||||||||||||||    
T  21825214 atatatatatatggataggatcaaatgacaccatggtgtca 21825174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 137; Significance: 3e-71; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 204 - 368
Target Start/End: Complemental strand, 2055147 - 2054983
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||| |||||||||||||||||||||||||| |||||||||||||  |||||| ||||||||||||||||||||| ||||||||||||||    
T  2055147 atatatatatagggataggatcaaatgacaccatggtgtcaaaattagtttgacacaaaatctcatccattcatttcatttaatccaaaggtttaaaact 2055048  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcat 368  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2055047 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcat 2054983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 864028 - 863863
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  864028 atatatatatagggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 863929  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  863928 atcaccaaattaattaacatacatcaaatactctctatcacctaattaagaaacatatctatcatc 863863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 36151163 - 36150998
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||  ||||||||    
T  36151163 atatatatatagagttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaagacttaaaact 36151064  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36151063 atcaccaaattaattaacatacaccaaatactctctatcacctaattaagaaacatatctatcatc 36150998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 217 - 369
Target Start/End: Original strand, 36150338 - 36150490
Alignment:
Q  217 gttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaa 316  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  36150338 gttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggtttaaaactataaccaaattaa 36150437  T
Q  317 ttaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  36150438 ttaatatacaccaaatattctctatcacctaattaagaaacatatctatcatc 36150490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 863196 - 863360
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||| ||||| ||||||||    
T  863196 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattttatttaatccaaaggcttaaaact 863294  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  863295 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaaaatatctatcatc 863360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 204 - 365
Target Start/End: Complemental strand, 8043866 - 8043705
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  8043866 atatatatatagggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 8043767  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctat 365  Q
    || |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  8043766 attaccaaattaattaacatacatcaaatactctctatcacctaattaagaaacatatctat 8043705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 34452239 - 34452404
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||| |||||||| ||| | ||||||||    
T  34452239 atatatatatagggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatcccttcattttatttaatccaaatgcttaaaact 34452338  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34452339 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaaaatatctatcatc 34452404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 2054345 - 2054509
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||    
T  2054345 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacactaaatcttatccattcatttcatttaatccaaaggtttaaaact 2054443  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||| ||| || || ||||||||||||||||||||||||||||||||||||||||||    
T  2054444 atcaccaaattaagtaacatgcatcaaatactctctatcacctaattaagaaacatatctatcatc 2054509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 34453071 - 34452907
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||  ||||| ||||||||    
T  34453071 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaattttatccattcatttcatttaattcaaaggcttaaaact 34452973  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  34452972 atcaccaaattaattaacatacatcaaatactccctatcacctaattaagaaacatatctatcatc 34452907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 215 - 369
Target Start/End: Original strand, 37875391 - 37875545
Alignment:
Q  215 gggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaatt 314  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||| |||| ||||||| |||||||| ||||| |||||||||||||||||||    
T  37875391 gggttaggatcaaatgacaccatggtgtcaaaattagtttgacacgaaatctcatcccttcattttatttaatccaaaggcttaaaactatcaccaaatt 37875490  T
Q  315 aattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  37875491 aattaatatacaccaaatactctctatcacttaattaagaaaaatatctatcatc 37875545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 204 - 365
Target Start/End: Complemental strand, 37876215 - 37876053
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaat-cttatccattcatttcatttaatcgaaaggtttaaaac 302  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||| || |||| ||||||| |||||||| ||||| |||||||    
T  37876215 atatatatatagggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaattctcatcccttcattttatttaatccaaaggcttaaaac 37876116  T
Q  303 tatcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctat 365  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||    
T  37876115 tatcaccaaattaattaacatacatcaaatactccctatcacctaattaagaaacatatctat 37876053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 246 - 369
Target Start/End: Complemental strand, 27006407 - 27006284
Alignment:
Q  246 aattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaatatacaccaaatactctctatcacc 345  Q
    |||| |||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27006407 aatttgtttgataccaaatcttatccattcatttcatttaatcgaaagatttaaaactatcaccaaattaattaatatacacaaaatactctctatcacc 27006308  T
Q  346 taattaagaaacatatctatcatc 369  Q
    |||||||||||||||| |||||||    
T  27006307 taattaagaaacatatttatcatc 27006284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 254 - 368
Target Start/End: Original strand, 8043081 - 8043195
Alignment:
Q  254 tgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaatatacaccaaatactctctatcacctaattaag 353  Q
    ||||||||||| | ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8043081 tgacatcaaatttcatccattcatttcatttaatccaaaggtttaaaactatcatcaaattaattaatatacaccaaatactctctatcacctaattaag 8043180  T
Q  354 aaacatatctatcat 368  Q
    ||| |||||||||||    
T  8043181 aaatatatctatcat 8043195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 204 - 337
Target Start/End: Complemental strand, 39830866 - 39830738
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| |||| ||||||||||||    |||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39830866 atatatatatggg-ttagaatcaaatgacac----gtgtcaaaattaatttgacatcaaatcttatccattcatttcatttaatccaaaggtttaaaact 39830772  T
Q  304 atcaccaaattaattaatatacaccaaatactct 337  Q
    ||||| ||||||||||| |||||| |||||||||    
T  39830771 atcacaaaattaattaacatacacaaaatactct 39830738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 235 - 361
Target Start/End: Complemental strand, 7498344 - 7498218
Alignment:
Q  235 catggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaatatacaccaaatac 334  Q
    |||||||||| ||||| ||||||||||||||| ||||||||||||| ||||||  ||| |||||||| ||| |||||||||||||| ||| | |||||||    
T  7498344 catggtgtcaaaattactttgacatcaaatctcatccattcatttcttttaattcaaatgtttaaaattatgaccaaattaattaacatatatcaaatac 7498245  T
Q  335 tctctatcacctaattaagaaacatat 361  Q
    ||| |||||||||||||| ||||||||    
T  7498244 tctttatcacctaattaaaaaacatat 7498218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 24433434 - 24433332
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||| ||||||| ||||||||||  ||||||||| ||| ||||||||||    
T  24433434 atatatatatagggataggatcaaatgacaccatgatgtcaaaattagtttgacaccaaatctcatccattcatcacatttaatccaaaagtttaaaact 24433335  T
Q  304 atc 306  Q
    |||    
T  24433334 atc 24433332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 204 - 288
Target Start/End: Complemental strand, 19911193 - 19911108
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgaca-tcaaatcttatccattcatttcatttaatc 288  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||  ||||| |||||||||||||||||||||||    
T  19911193 atatatatatagggttaggatcaaatgacaccatggtgtcaaaattagtttgacacccaaattttatccattcatttcatttaatc 19911108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 204 - 300
Target Start/End: Original strand, 38985979 - 38986075
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaa 300  Q
    |||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||  ||| |||| |||||||||||    
T  38985979 atatatatatagggataggatcaaatgacactatggtgtcaaaattagtttgacaccaaatcttatccattcattatattcaatccaaaggtttaaa 38986075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 223 - 319
Target Start/End: Complemental strand, 38986898 - 38986802
Alignment:
Q  223 atcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatta 319  Q
    ||||||||||| |||||| ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||  |||| ||||||    
T  38986898 atcaaatgacatcatggtatcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaggtttaaaactatccacaaaataatta 38986802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 215 - 352
Target Start/End: Complemental strand, 7486949 - 7486811
Alignment:
Q  215 gggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaa-tcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaat 313  Q
    |||| ||||||||| ||||||||| ||||| ||| | |||||||||||| ||| ||||||||||||| ||| ||  ||||  |||||||||| |||||||    
T  7486949 gggtaaggatcaaaagacaccatgatgtcaaaatcactttgacatcaaaatctcatccattcatttcttttgattcaaagacttaaaactatgaccaaat 7486850  T
Q  314 taattaatatacaccaaatactctctatcacctaattaa 352  Q
    ||||||| ||| | |||||||||| ||||||||||||||    
T  7486849 taattaacatatatcaaatactctttatcacctaattaa 7486811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 27059166 - 27059267
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||| ||| ||||||| ||||||||||  ||||||||| |||||||||||| |    
T  27059166 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttcacaccaaatctcatccattcatcacatttaatccaaaggtttaaaatt 27059264  T
Q  304 atc 306  Q
    |||    
T  27059265 atc 27059267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 27060079 - 27059977
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||| ||||||||||||| ||||| |||||| ||||||||||||| ||||||| |||||||||||  |||||||| ||||||||||| ||    
T  27060079 atatatatatagggataggatcaaatgataccatagtgtcaaaattagtttgacaccaaatctcatccattcattatatttaatccaaaggtttaaagct 27059980  T
Q  304 atc 306  Q
    |||    
T  27059979 atc 27059977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 204 - 300
Target Start/End: Original strand, 24429608 - 24429703
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaa 300  Q
    ||||||||||||| | |||||||||||||||||| |||||| ||||||||||||| ||||||| |||||||||||  |||||||| |||||||||||    
T  24429608 atatatatatgggat-aggatcaaatgacaccatcgtgtcaaaattagtttgacaccaaatctcatccattcattatatttaatccaaaggtttaaa 24429703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 463 - 548
Target Start/End: Original strand, 37875639 - 37875723
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||||||||||||||       ||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  37875639 tataatcatactcaaacttcttttctaaactttttt-ataaaatgaatggttgaactcatatacctatggttgtttgagtcatcat 37875723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 463 - 542
Target Start/End: Original strand, 36150584 - 36150662
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagt 542  Q
    ||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||||||||| ||||||||||    
T  36150584 tataatcatactcaaacttcttttctaaactttttt-ataaaatgaatggtagaactcatatacctatggttgtttgagt 36150662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 463 - 548
Target Start/End: Original strand, 34452498 - 34452582
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||||||||||||||       || |||| |||||| ||||||||||||||||| ||||||||||||||||    
T  34452498 tataatcatactcaaacttcttttctaaactttttt-atgaaatgaatggttgaactcatatacctatggttgtttgagtcatcat 34452582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 548
Target Start/End: Original strand, 8043290 - 8043374
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||| ||||||||||       ||||||| |||| | ||||||||||||||||| ||||||||||||||||    
T  8043290 tataatcatactcaaactttttttctaaactttttt-ataaaatgaatgattgaactcatatacctatggttgtttgagtcatcat 8043374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 2868721 - 2868668
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgaca 258  Q
    ||||||||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  2868721 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgaca 2868668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 463 - 545
Target Start/End: Original strand, 863454 - 863535
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcat 545  Q
    |||||||||||||||||||||||||||||        ||||||| || ||||||||||||||| ||||| |||||||||||||    
T  863454 tataatcatactcaaacttcttttctaaa-tgtttttataaaatgaagggtagaactcatatatctatggttgtttgagtcat 863535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 8911903 - 8911833
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 274  Q
    |||||||||| ||| |||||||||||||||||||||||||| | | | ||||||| |||||| || |||||    
T  8911903 atatatatatagggataggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcataaccatt 8911833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 27006190 - 27006107
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||||||||||||||       ||||||| ||||| ||||||   ||||||||| ||| ||||||||||||    
T  27006190 tataatcatactcaaacttcttttctaaactttttttataaaatgaatggcagaact--aatacctatggttgcttgagtcatcat 27006107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 500 - 548
Target Start/End: Complemental strand, 2054883 - 2054835
Alignment:
Q  500 ataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||| |||||| ||||||||||| ||||| ||||||||||||||||    
T  2054883 ataaaatgaatggttgaactcatatatctatggttgtttgagtcatcat 2054835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 42849565 - 42849495
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 274  Q
    |||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| |||||| || |||||    
T  42849565 atatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctagccatt 42849495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 20203367 - 20203327
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtca 244  Q
    |||||||||  ||| ||||||||||||||||||||||||||    
T  20203367 atatatataatgggataggatcaaatgacaccatggtgtca 20203327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 5e-70; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 215 - 369
Target Start/End: Complemental strand, 25836665 - 25836511
Alignment:
Q  215 gggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaatt 314  Q
    |||||||||||||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  25836665 gggttaggatcaaatgacaccatggtgtcaaaattattttgacaccaaatctcatccattcatttcatttaatctaaaggtttaaaactatcaccaaatt 25836566  T
Q  315 aattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25836565 aattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 25836511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 492201 - 492037
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  492201 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 492103  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  492102 atcaccaaattaattaacatacaccaaatactctctatcacctaattaagaaacatatctatcatc 492037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 14481525 - 14481361
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  14481525 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 14481427  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14481426 atcaccaaattaattaacatacaccaaatactctctatcacctaattaagaaacatatctatcatc 14481361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 215 - 369
Target Start/End: Complemental strand, 9918538 - 9918384
Alignment:
Q  215 gggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaatt 314  Q
    |||||||||||||||||||||||||||||| ||||||||||||| || |||| ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  9918538 gggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccatatctcatccattcatttcatttaatccaaaggtttgaaactatcaccaaatt 9918439  T
Q  315 aattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9918438 aattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 9918384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 3259873 - 3259709
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||| ||||| ||||||||    
T  3259873 atatatatatggg-ttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattttatttaatccaaaggcttaaaact 3259775  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3259774 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaaaatatctatcatc 3259709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 3259062 - 3259226
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  3259062 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 3259160  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||    
T  3259161 atcaccaaattaattaacatacatcaaatactctctatcacctaattaagaaacatatatatcatc 3259226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 15883155 - 15883320
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  15883155 atatatatatagggttaggatcaaatgacatcatggtgtcaaaattagtttgacatcaaatcttatccattcatttcatttaatccaaaggcttaaaact 15883254  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||| ||||||||||  |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  15883255 atcacgaaattaattatcatacaccaaatactctctatcatctaattgagaaacatatctatcatc 15883320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 36038651 - 36038486
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||  ||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||| |||||||| ||| | ||||||||    
T  36038651 atatatatatatggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatattatccattcatttaatttaatccaaaagcttaaaact 36038552  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36038551 atcaccaaattaattaacatacaccaaatactctctatcacctaattaagaaacatatctatcatc 36038486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 4737870 - 4737704
Alignment:
Q  204 atatatatatggg-gttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaac 302  Q
    ||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||| |||||||||||| |||||||| ||||| |||||||    
T  4737870 atatatatatgggtgttaggatcaaatgacaccatgatgtcaaaattagtttgacaccaaatctcatccattcattttatttaatccaaaggcttaaaac 4737771  T
Q  303 tatcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  4737770 tatcaccaaattaattaatatataccaaatactctctatcacctaattaagaaaaatatctatcatc 4737704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 219 - 369
Target Start/End: Original strand, 9917733 - 9917883
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 318  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  9917733 taggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaactatcaccaaattaatt 9917832  T
Q  319 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    || ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  9917833 aacatacatcaaatactctctatcacataattaagaaacatatctatcatc 9917883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 219 - 369
Target Start/End: Complemental strand, 15915866 - 15915716
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 318  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  15915866 taggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaactatcaccaaattaatt 15915767  T
Q  319 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    || ||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  15915766 aacatacatcaaatactccctatcacctaattaagaaacatatctatcatc 15915716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 219 - 368
Target Start/End: Complemental strand, 10394915 - 10394766
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 318  Q
    |||||| ||||||||||||||||||| ||||||||||||| ||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  10394915 taggataaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatctattcatttcatttaatccaaaggtttaaaactatcaccaaattaatt 10394816  T
Q  319 aatatacaccaaatactctctatcacctaattaagaaacatatctatcat 368  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10394815 aatatacaccaaatactctctatcacctaattaaaaaacatatctatcat 10394766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 14480738 - 14480903
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||| || ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||  ||||| ||| ||||    
T  14480738 atatatatatagggatatgatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaattcaaaggcttagaact 14480837  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  14480838 atcaccaaattaattaatatacaccaaatactctctatcacttaattaagaaaaatatctatcatc 14480903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 490903 - 491069
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgt--cataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaa 301  Q
    ||||||||||||| | | |||||||||||||||||||||  || ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||    
T  490903 atatatatatgggat-atgatcaaatgacaccatggtgtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaa 491001  T
Q  302 ctatcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  491002 ctatcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaaaatatctatcatc 491069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 222 - 369
Target Start/End: Original strand, 25835861 - 25836008
Alignment:
Q  222 gatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaat 321  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||     
T  25835861 gatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaactatcatcaaattaattaac 25835960  T
Q  322 atacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25835961 atacatcaaatactctctatcacctaattaagaaacatatctatcatc 25836008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 4737034 - 4737199
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||  || || ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  4737034 atatatatatatggataagatcaaatgacaccatggtgtcaaaataagtttgacatcaaatcttatccattcatttcatttaatccaaaggcttaaaact 4737133  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  4737134 atcaccaaattaattaacatacatcaaatactctctatcacctaattatgaaacttatctatcatc 4737199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 222 - 369
Target Start/End: Original strand, 10394112 - 10394259
Alignment:
Q  222 gatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaat 321  Q
    ||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||     
T  10394112 gatcaaatgacaccatggtgtcaaaattaatttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaactatcaccaaattaattaac 10394211  T
Q  322 atacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||    
T  10394212 atacatcaaatactctctattacctaattaagaaacatatctatcatc 10394259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 215 - 369
Target Start/End: Original strand, 12281107 - 12281261
Alignment:
Q  215 gggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaatt 314  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||| |||||||| ||||| |||||||||| ||||||||    
T  12281107 gggttatgatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatcctttcattttatttaatccaaaggcttaaaactataaccaaatt 12281206  T
Q  315 aattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    |||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  12281207 aattaatatacatcaaatactctctaccacctaattaagaaaaatatctatcatc 12281261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 215 - 369
Target Start/End: Original strand, 15915084 - 15915238
Alignment:
Q  215 gggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaatt 314  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||| ||||||| |||| ||||||| |||||||| ||| | |||||||||||||||||||    
T  15915084 gggttaggatcaaatgacatcatggtgtcaaaattaatttgacaccaaatctcatcctttcattttatttaatccaaaagcttaaaactatcaccaaatt 15915183  T
Q  315 aattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  15915184 aattaatatacaccaaatactctctatcacctaattaaaaaaaatatctatcatc 15915238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 233 - 369
Target Start/End: Complemental strand, 12281900 - 12281764
Alignment:
Q  233 accatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaatatacaccaaat 332  Q
    |||||||||||| ||||||||||||| |||||||||| |||||||||||||||||| ||||| ||| ||||||||||||||||||||| ||||| |||||    
T  12281900 accatggtgtcaaaattagtttgacaccaaatcttattcattcatttcatttaatccaaaggcttagaactatcaccaaattaattaacatacatcaaat 12281801  T
Q  333 actctctatcacctaattaagaaacatatctatcatc 369  Q
    |||||||||||||||||||||| ||||||||||||||    
T  12281800 actctctatcacctaattaagatacatatctatcatc 12281764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 463 - 545
Target Start/End: Original strand, 12281355 - 12281436
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcat 545  Q
    ||||||||||||||||||||||||||||||       ||||||| |||||| ||||||||||||||||| |||||||||||||    
T  12281355 tataatcatactcaaacttcttttctaaactttttt-ataaaatgaatggttgaactcatatacctatggttgtttgagtcat 12281436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 466 - 548
Target Start/End: Original strand, 491168 - 491249
Alignment:
Q  466 aatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    |||||||||||||||| ||||||||||       ||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  491168 aatcatactcaaacttattttctaaactttttt-ataaaatgaatggttgaactcatatacctatgattgtttgagtcatcat 491249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 3259635 - 3259551
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    |||||||||| |||||||||||||||||||       ||||||| |||| | ||||||||||||||||| ||||||||||||||||    
T  3259635 tataatcatattcaaacttcttttctaaactttttt-ataaaatgaatgtttgaactcatatacctatggttgtttgagtcatcat 3259551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 4737610 - 4737526
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||||||||| ||||       ||||||| |||||| |||||||||||| |||| ||||||||||||||||    
T  4737610 tataatcatactcaaacttcttttccaaactttttt-ataaaatgaatggttgaactcatatacatatggttgtttgagtcatcat 4737526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 10394671 - 10394587
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||| |||||||||        ||||||| |||||| |||||||||||| |||| ||||||||||||||||    
T  10394671 tataatcatactcaaactttttttctaaa-tttttttataaaatgaatggttgaactcatatacatatggttgtttgagtcatcat 10394587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 500 - 548
Target Start/End: Original strand, 14481022 - 14481070
Alignment:
Q  500 ataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  14481022 ataaaatgaatggttgaactcatatacctatgattgtttgagtcatcat 14481070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 23206261 - 23206191
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 274  Q
    |||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| |||||| || |||||    
T  23206261 atatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctagccatt 23206191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 492
Target Start/End: Original strand, 15915332 - 15915361
Alignment:
Q  463 tataatcatactcaaacttcttttctaaac 492  Q
    ||||||||||||||||||||||||||||||    
T  15915332 tataatcatactcaaacttcttttctaaac 15915361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 500 - 548
Target Start/End: Complemental strand, 9918256 - 9918208
Alignment:
Q  500 ataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||| |||||| ||||||||||| ||||| |||||||| |||||||    
T  9918256 ataaaatgaatggttgaactcatatatctatggttgtttgaatcatcat 9918208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 11768830 - 11768870
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtca 244  Q
    |||||||||| ||| ||||||||||||||| ||||||||||    
T  11768830 atatatatatagggataggatcaaatgacatcatggtgtca 11768870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 21145927 - 21145995
Alignment:
Q  206 atatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 274  Q
    |||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| |||||| || |||||    
T  21145927 atatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctagccatt 21145995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 3e-68; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 218 - 369
Target Start/End: Original strand, 23601739 - 23601890
Alignment:
Q  218 ttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaat 317  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  23601739 ttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatcaaaaggcttaaaactatcaccaaattaat 23601838  T
Q  318 taatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23601839 taacatacaccaaatactctctatcacctaattaagaaacatatctatcatc 23601890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 219 - 368
Target Start/End: Original strand, 24081458 - 24081607
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 318  Q
    |||||||||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24081458 taggatcaaatgacaccatggtgtcaaaattaatttgacaccaaatctcatccattcatttcatttaatccaaaggtttaaaactatcaccaaattaatt 24081557  T
Q  319 aatatacaccaaatactctctatcacctaattaagaaacatatctatcat 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24081558 aatatacaccaaatactctctatcacctaattaagaaacatatctatcat 24081607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 48644897 - 48644732
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||| |||||||| ||||  ||||||||    
T  48644897 atatatatatagggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatcccttcattttatttaatccaaagacttaaaact 48644798  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  48644797 atcaccaaattaattaatatacaccaaatactctctatcacctatttaagaaaaatatctatcatc 48644732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 216 - 369
Target Start/End: Complemental strand, 51661411 - 51661258
Alignment:
Q  216 ggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaatta 315  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||| ||||| |||||| |||||| ||||||    
T  51661411 ggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattttatttaatccaaaggcttaaaaatatcactaaatta 51661312  T
Q  316 attaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  51661311 attaatatacaccaaatactctctatcacctaattaagaaaaatatctatcatc 51661258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 214 - 369
Target Start/End: Complemental strand, 24082253 - 24082098
Alignment:
Q  214 ggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaat 313  Q
    |||| ||||||||||||||| |||||| ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  24082253 ggggataggatcaaatgacatcatggtatcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaactatcaccaaat 24082154  T
Q  314 taattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||    
T  24082153 taattaacatacatcaaatattctctatcacctaattaagaaacatatctatcatc 24082098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 215 - 369
Target Start/End: Complemental strand, 23174095 - 23173942
Alignment:
Q  215 gggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaatt 314  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||| | ||||| |||||||| ||||| |||||||||||||||||||    
T  23174095 gggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccct-cattttatttaatccaaaggcttaaaactatcaccaaatt 23173997  T
Q  315 aattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23173996 aattaatatacaccaaatactctctatcacctaattaagaaaaatatctatcatc 23173942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 219 - 369
Target Start/End: Complemental strand, 31151485 - 31151335
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 318  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  31151485 taggatcaaatgacaccatggtatcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaagtttaaaactatcaccaaattaatt 31151386  T
Q  319 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    |||||| |||||||||||||||||||||||||||||||||| | |||||||    
T  31151385 aatatataccaaatactctctatcacctaattaagaaacatctttatcatc 31151335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 219 - 368
Target Start/End: Original strand, 23173288 - 23173437
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 318  Q
    ||||||||||||||| |||||||||| |||||||||||||  |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  23173288 taggatcaaatgacatcatggtgtcaaaattagtttgacactaaatcttatccattcatttcatttaatccaaaggcttaaaactatcaccaaattaatt 23173387  T
Q  319 aatatacaccaaatactctctatcacctaattaagaaacatatctatcat 368  Q
    || ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  23173388 aacatacatcaaatactccctatcacctaattaagaaacatatctatcat 23173437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 31150667 - 31150832
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||    
T  31150667 atatatatatagggataggatcaaatgacacaatggtgtcaaaattagtttgacaccaaatcttatccattcattttatttaatccaaaggcttaaaact 31150766  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||| ||||| ||||||||||||||||    
T  31150767 atcaccaaattaattaacatacatcaaatactctcaatcacctgattaaaaaacatatctatcatc 31150832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 39870052 - 39870217
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||||||||| ||||||| |||  ||||||| |||||||| ||||| ||||||||    
T  39870052 atatatatatagggttaggatcaaatgacgccatggtgtcaaaattagtttgacaccaaatctcatcatttcattttatttaatccaaaggcttaaaact 39870151  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||    
T  39870152 atcaccaaattaattaatatatactaaatactctctatcacctaattaagaaaaatatctatcatc 39870217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 204 - 368
Target Start/End: Complemental strand, 48577621 - 48577458
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||| ||||| ||||||||    
T  48577621 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcattccatttaatccaaaggcttaaaact 48577523  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcat 368  Q
    ||||||||||||||||| ||||| |||||||||| | ||| || |||||||||||||||||||||    
T  48577522 atcaccaaattaattaacatacatcaaatactctttttcatcttattaagaaacatatctatcat 48577458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 222 - 369
Target Start/End: Complemental strand, 39870859 - 39870712
Alignment:
Q  222 gatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaat 321  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||     
T  39870859 gatcaaatgacaccatggtgtcaaatttagtttgacaccaaatcttatcaattcatttcatttaatccaaaggcttaaaactatcaccaaattaattaac 39870760  T
Q  322 atacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  39870759 atacatcaaatactcactatcacctaattaagaaacatatatatcatc 39870712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 204 - 369
Target Start/End: Original strand, 51660592 - 51660755
Alignment:
Q  204 atatatatatggggttaggatcaaatgacac-catggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaac 302  Q
    ||||||||||  || |||||||||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||||||||| ||||| |||||||    
T  51660592 atatatatatatggataggatcaaatgacacacatggtgtcaaaattagtttgtcaccaaatcttatccattcatttcatttaatccaaaggcttaaaac 51660691  T
Q  303 tatcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||   ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  51660692 ta---ccaaattaattaacatacatcaaatactctctatcacctaattaagaaacatatctatcatc 51660755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 204 - 341
Target Start/End: Complemental strand, 23602505 - 23602367
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtca---taattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaa 300  Q
    |||||||||| ||||||||||||||||||||||||||||||   |||||  ||||||| ||||||||||||||||||||||||||||  |||||||||||    
T  23602505 atatatatatagggttaggatcaaatgacaccatggtgtcaaactaatt--tttgacaccaaatcttatccattcatttcatttaattcaaaggtttaaa 23602408  T
Q  301 actatcaccaaattaattaatatacaccaaatactctctat 341  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  23602407 actatcaccaaattaattaatatacaccaaatattctctat 23602367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 295 - 368
Target Start/End: Complemental strand, 18249287 - 18249214
Alignment:
Q  295 tttaaaactatcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcat 368  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18249287 tttaaaactatcaccaaattaattaatatacatcaaatactctctatcacctaattaagaaacatatctatcat 18249214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 4595642 - 4595540
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||  ||| |||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||  |||||||| ||||||||||| ||    
T  4595642 atatatataatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattatatttaatccaaaggtttaaagct 4595543  T
Q  304 atc 306  Q
    |||    
T  4595542 atc 4595540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 219 - 306
Target Start/End: Complemental strand, 40959823 - 40959736
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatc 306  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||  |||||||| ||||||||||| |||||    
T  40959823 taggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattatatttaatccaaaggtttaaagctatc 40959736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 219 - 306
Target Start/End: Original strand, 4594710 - 4594797
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatc 306  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| | ||||||||||  ||||||||  |||||||||||||||||    
T  4594710 taggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatttcatccattcatcacatttaattcaaaggtttaaaactatc 4594797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 23173848 - 23173763
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||||||||||||||       ||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  23173848 tataatcatactcaaacttcttttctaaactttttttataaaatgaatggttgaactcatatacctatggttgtttgagtcatcat 23173763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 219 - 306
Target Start/End: Original strand, 40958891 - 40958978
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatc 306  Q
    ||||||||||||| |||||||||||| ||||||||||||| ||||||  ||||||||||  ||||||||  |||||||||||||||||    
T  40958891 taggatcaaatgataccatggtgtcaaaattagtttgacaccaaatcccatccattcatcacatttaattcaaaggtttaaaactatc 40958978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 463 - 542
Target Start/End: Complemental strand, 23602300 - 23602222
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagt 542  Q
    ||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||||||||| ||||||||||    
T  23602300 tataatcatactcaaacttcttttctaaactttttt-ataaaatgaatggtagaactcatatacctatggttgtttgagt 23602222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 18249088 - 18249004
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||| ||||||||||       ||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  18249088 tataatcatactcaaactttttttctaaactttttt-ataaaatgaatggttgaactcatatacctatggttgtttgagtcatcat 18249004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 463 - 548
Target Start/End: Original strand, 24081702 - 24081786
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||| ||||||||||       ||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  24081702 tataatcatactcaaactttttttctaaactttttt-ataaaatgaatggttgaactcatatacctatggttgtttgagtcatcat 24081786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 51661164 - 51661080
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    |||||||||||||||||||||||| |||||       ||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  51661164 tataatcatactcaaacttcttttttaaactttttt-ataaaatgaatggttgaactcatatacctatggttgtttgagtcatcat 51661080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 50505446 - 50505366
Alignment:
Q  222 gatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaac 302  Q
    |||||||| | ||| |||||||| ||||| ||||||||||||||| ||||||| ||||| ||||||| ||||| |||||||    
T  50505446 gatcaaataataccgtggtgtcaaaattattttgacatcaaatctcatccatttatttcctttaatccaaaggcttaaaac 50505366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 203 - 274
Target Start/End: Complemental strand, 21791548 - 21791478
Alignment:
Q  203 aatatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 274  Q
    |||||||||||||| | ||||||||||||||||||||||||| | | | ||||||| ||||||||| |||||    
T  21791548 aatatatatatgggat-aggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcttaaccatt 21791478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 31151241 - 31151157
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    |||||||||||| |||||| ||||||||||       ||||||| |||||| ||||||||||||||||| ||||| ||||||||||    
T  31151241 tataatcatacttaaactttttttctaaactttttt-ataaaatgaatggttgaactcatatacctatgattgttagagtcatcat 31151157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 274
Target Start/End: Original strand, 5216550 - 5216620
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 274  Q
    |||||||||| ||| |||||||||||||||||||||||||| | | | ||||| | ||||||||| |||||    
T  5216550 atatatatatagggataggatcaaatgacaccatggtgtcaaattaaatttgataccaaatcttaaccatt 5216620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 14886141 - 14886181
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtca 244  Q
    |||||||||| ||| ||||||||||||||||||||||||||    
T  14886141 atatatatatagggataggatcaaatgacaccatggtgtca 14886181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 308
Target Start/End: Original strand, 16317541 - 16317645
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||| || |||||||||||| |||||||||| | | | | ||| | ||||||||||||||| | ||  ||||||| ||||| |||||||     
T  16317541 atatatatatagggataagatcaaatgacatcatggtgtcaaattaaatgtgagaccaaatcttatccatttaatttgtttaatccaaaggcttaaaaca 16317640  T
Q  304 atcac 308  Q
    |||||    
T  16317641 atcac 16317645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 500 - 548
Target Start/End: Original strand, 48577085 - 48577133
Alignment:
Q  500 ataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||| ||||||  |||||||||||||||| ||||||||||||||||    
T  48577085 ataaaatgaatggttaaactcatatacctatggttgtttgagtcatcat 48577133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 274
Target Start/End: Original strand, 21790739 - 21790809
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 274  Q
    |||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| |||||| || |||||    
T  21790739 atatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcataaccatt 21790809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 44672184 - 44672106
Alignment:
Q  209 tatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaat 287  Q
    ||||| ||| || |||||||||||| |||||||  | ||||||||||||| ||||| | ||| ||||||| ||||||||    
T  44672184 tatatagggataagatcaaatgacatcatggtggtaaaattagtttgacaccaaatatcatctattcattacatttaat 44672106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 492
Target Start/End: Original strand, 39870311 - 39870340
Alignment:
Q  463 tataatcatactcaaacttcttttctaaac 492  Q
    ||||||||||||||||||||||||||||||    
T  39870311 tataatcatactcaaacttcttttctaaac 39870340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 5496534 - 5496574
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtca 244  Q
    |||||||||| ||| |||||||||||||||||| |||||||    
T  5496534 atatatatatagggataggatcaaatgacaccaaggtgtca 5496574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 17606252 - 17606292
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtca 244  Q
    |||||||||| ||| |||||||||||||||||| |||||||    
T  17606252 atatatatatagggataggatcaaatgacaccaaggtgtca 17606292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 7e-66; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 218 - 369
Target Start/End: Complemental strand, 24063830 - 24063679
Alignment:
Q  218 ttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaat 317  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||    
T  24063830 ttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttgatttaatccaaaggcttaaaactatcaccaaattaat 24063731  T
Q  318 taatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24063730 taacatacaccaaatactctctatcacctaattaagaaacatatctatcatc 24063679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 214 - 369
Target Start/End: Complemental strand, 34713414 - 34713259
Alignment:
Q  214 ggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaat 313  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  34713414 ggggttagaatcaaatgacaccatggtgtcaaaattagtttgacatcaaatcttattcattcatttcatttaattgaaaggtttaaaactatcatcaaat 34713315  T
Q  314 taattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  34713314 taattaatatacacaaaatactctctatcacctaattaagaaacatatttatcatc 34713259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 225 - 369
Target Start/End: Original strand, 5114213 - 5114357
Alignment:
Q  225 caaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaatata 324  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5114213 caaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggtttaaaactatcaccaaattaattaatata 5114312  T
Q  325 caccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    |||||||||||||||||||||||||||| |||||||| |||||||    
T  5114313 caccaaatactctctatcacctaattaataaacatatatatcatc 5114357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 204 - 369
Target Start/End: Complemental strand, 18969915 - 18969751
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| |||||||||||||  |||||| || |||||||||||||||||| ||||||||||||||    
T  18969915 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacactaaatctcattcattcatttcatttaatccaaaggtttaaaact 18969817  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatc 369  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  18969816 atcaccaaattaattaatatacaccacatactctctatcacctaattaagaatcatatctatcatc 18969751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 204 - 368
Target Start/End: Original strand, 18969100 - 18969264
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||  ||||||||    
T  18969100 atatatatatagggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaagacttaaaact 18969199  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcat 368  Q
    || |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||    
T  18969200 ataaccaaattaattaacatacatcaaatactctctatcacctcattaagaaacatatctatcat 18969264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 235 - 369
Target Start/End: Original strand, 24063039 - 24063173
Alignment:
Q  235 catggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaatatacaccaaatac 334  Q
    ||||||| || ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  24063039 catggtgacaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggtttaaaactatcaccaaattaattaatatacaccaaatat 24063138  T
Q  335 tctctatcacctaattaagaaacatatctatcatc 369  Q
    |||||||||||||||||||||||||||||||||||    
T  24063139 tctctatcacctaattaagaaacatatctatcatc 24063173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 1370149 - 1370250
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||  ||||||||  ||||||||||||||    
T  1370149 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatcacatttaattcaaaggtttaaaact 1370247  T
Q  304 atc 306  Q
    |||    
T  1370248 atc 1370250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 204 - 300
Target Start/End: Complemental strand, 1371119 - 1371023
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaa 300  Q
    ||||||||||  || |||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||  |||||||| |||||||||||    
T  1371119 atatatatatatggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattatatttaatccaaaggtttaaa 1371023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 34713165 - 34713080
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    ||||||||||||||||||||||||||||||       ||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  34713165 tataatcatactcaaacttcttttctaaactttttttataaaatgaatggtagaattcatatacctatggttgtttgagtcatcat 34713080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 463 - 542
Target Start/End: Original strand, 24063267 - 24063346
Alignment:
Q  463 tataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatgtttgtttgagt 542  Q
    ||||||||||||||||||| ||||| ||||       ||||||| |||||||||||||||||||||||| ||||||||||    
T  24063267 tataatcatactcaaacttattttcaaaactttttttataaaatgaatggtagaactcatatacctatggttgtttgagt 24063346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 288
Target Start/End: Complemental strand, 10789030 - 10788965
Alignment:
Q  223 atcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatc 288  Q
    |||||||||||  ||||||||| ||||||||||||||||||||| || ||||| ||||||||||||    
T  10789030 atcaaatgacaatatggtgtcaaaattagtttgacatcaaatctcatacattcgtttcatttaatc 10788965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 501 - 548
Target Start/End: Original strand, 5121016 - 5121063
Alignment:
Q  501 taaaataaatggtagaactcatatacctatgtttgtttgagtcatcat 548  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||||||    
T  5121016 taaaatgaatggtagaactcatatatctatggttgtttgagtcatcat 5121063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 219 - 274
Target Start/End: Original strand, 32907431 - 32907486
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 274  Q
    |||||||||||||||||||||||||| | ||| ||||||| ||||||||| |||||    
T  32907431 taggatcaaatgacaccatggtgtcaaatttaatttgacaccaaatcttaaccatt 32907486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 296
Target Start/End: Original strand, 4620870 - 4620944
Alignment:
Q  222 gatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtt 296  Q
    |||||||||| || ||| ||| | |||| |||||||||||||||| |||||||||||  |||||||| |||||||    
T  4620870 gatcaaatgatactatgatgttaaaatttgtttgacatcaaatctcatccattcattatatttaatccaaaggtt 4620944  T

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Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 205 - 274
Target Start/End: Complemental strand, 18649964 - 18649895
Alignment:
Q  205 tatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 274  Q
    ||||||||| ||| |||||||||||||||||||||||||| | | | ||||||| |||||| || |||||    
T  18649964 tatatatatagggataggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcataaccatt 18649895  T

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Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 8992896 - 8992936
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtca 244  Q
    |||||||||| ||| ||||||||||||||||||||||||||    
T  8992896 atatatatatagggataggatcaaatgacaccatggtgtca 8992936  T

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Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 9017343 - 9017383
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtca 244  Q
    |||||||||| ||| ||||||||||||||||||||||||||    
T  9017343 atatatatatagggataggatcaaatgacaccatggtgtca 9017383  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 492
Target Start/End: Original strand, 5114420 - 5114449
Alignment:
Q  463 tataatcatactcaaacttcttttctaaac 492  Q
    ||||||||||||||||||||||||||||||    
T  5114420 tataatcatactcaaacttcttttctaaac 5114449  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 308
Target Start/End: Complemental strand, 35073473 - 35073373
Alignment:
Q  208 atatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatca 307  Q
    |||||| ||| || |||||||||||| || ||||||| | | | | ||||| ||||||||||||||| | || |||||| | ||||| ||||||| ||||    
T  35073473 atatatagggataagatcaaatgacatcaaggtgtcaaattaaatgtgacaccaaatcttatccatttaatttatttaacccaaaggcttaaaacaatca 35073374  T
Q  308 c 308  Q
    |    
T  35073373 c 35073373  T

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Target: scaffold0050 (Bit Score: 122; Significance: 3e-62; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 204 - 365
Target Start/End: Original strand, 8401 - 8561
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  8401 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 8499  T
Q  304 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctat 365  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||    
T  8500 atcaccaaattaattaacatacatcaaatactccctatcacctaattaagaaacatatctat 8561  T

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Target: scaffold1339 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 204 - 308
Target Start/End: Original strand, 1906 - 2009
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    ||||||||||||| | |||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  1906 atatatatatgggat-aggatcaaataacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 2004  T
Q  304 atcac 308  Q
    |||||    
T  2005 atcac 2009  T

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Target: scaffold0093 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 21944 - 22046
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 303  Q
    |||||||||| ||| ||||||||||||| |||||||||||| ||||||||||||| ||||||| |||||||||||  |||||||| ||||||||||| ||    
T  21944 atatatatatagggataggatcaaatgataccatggtgtcaaaattagtttgacaccaaatctcatccattcattatatttaatccaaaggtttaaagct 22043  T
Q  304 atc 306  Q
    |||    
T  22044 atc 22046  T

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Target: scaffold0093; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 219 - 306
Target Start/End: Complemental strand, 22819 - 22732
Alignment:
Q  219 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatc 306  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| | ||||||||||  ||||||||  |||||||||||||||||    
T  22819 taggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatttcatccattcatcacatttaattcaaaggtttaaaactatc 22732  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 274
Target Start/End: Original strand, 105500 - 105569
Alignment:
Q  204 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 274  Q
    ||||||||||||| | ||||||||||||||||| ||||||| | | | ||||||| ||||||||| |||||    
T  105500 atatatatatgggat-aggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcttaaccatt 105569  T

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