View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0903_low_10 (Length: 394)
Name: NF0903_low_10
Description: NF0903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0903_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 98 - 389
Target Start/End: Complemental strand, 31524818 - 31524527
Alignment:
| Q |
98 |
acgcacacgcacgtaccacccaaacaaatctttgttcacttaattctaaaccaaaagctatttcattcatttgctcatacgacaaagttccaccgctccc |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |
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| T |
31524818 |
acgcacacgcacgtaccacccaaacaaatctttgttcacttaattctaaaccaaaagctaattcattcatttgctcatttgacaaagttccaccgctccc |
31524719 |
T |
|
| Q |
198 |
aaacgaaacgtaaaccactgattcctttggttgtttatcaagccaatgaattacagactcaatagcttgacctgtttctgactcagcttgtctcaccaag |
297 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| | |
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| T |
31524718 |
aaacgaaacataaaccactgattcctttggttgtttatcaagccattgaattacagactcagaagcttgacctatttctgactcagcttgtctcaccagg |
31524619 |
T |
|
| Q |
298 |
ggtccaactgcaaatacaggaactttcaataaacttgataattctccatcttcatcattcagtgctttaagctctctatgttgaagttcatc |
389 |
Q |
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|||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
31524618 |
ggtccaactgcaaacacaggaactttcaataaacttgatagttctccatctccatcattcagtgctttaagctctctatgttgaagttcatc |
31524527 |
T |
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