View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0903_low_12 (Length: 385)
Name: NF0903_low_12
Description: NF0903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0903_low_12 |
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Alignment Details
Target: chr6 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 68 - 384
Target Start/End: Original strand, 1064807 - 1065123
Alignment:
| Q |
68 |
aaccgagacaatgttatgattgnnnnnnnaatacccactcttttattaactaaaatctataaaagagtaaatgttaatgataccgttagaaagtgaatgt |
167 |
Q |
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| T |
1064807 |
aaccgagacaatgttatgattgtttttttaatatccactcttttattaagtaaaatctataaaagagtaaatgttaatgatactgttagaaagagaatgc |
1064906 |
T |
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| Q |
168 |
tacatttaaattggttgaacccgatttaaagcattannnnnnnaagaaggtcttcaaacattgttgtcttactccaacactataattctaatattcaacc |
267 |
Q |
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| T |
1064907 |
tacatttaaattggttgaacctgatttaaagcattatttttttaagaaggtcttcaaacattgttgtcttgctccaacactataattctaatattcaacc |
1065006 |
T |
|
| Q |
268 |
atttatctaccaaaattaatcaacacctaaataattcatctatctatcgagaaatcttttacaaaagagaaactaatgatgcatatacaacactcgaaac |
367 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
1065007 |
atttatctaccaaaattaatcaacacctaaataattcatctatctatcgagaaatcttttacaaaagagaaactaatgatgcatatacaacaatcgaaac |
1065106 |
T |
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| Q |
368 |
aagcaatgcaccgaata |
384 |
Q |
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|| |||||||||||||| |
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| T |
1065107 |
aaacaatgcaccgaata |
1065123 |
T |
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