View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0903_low_13 (Length: 375)
Name: NF0903_low_13
Description: NF0903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0903_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 13 - 290
Target Start/End: Original strand, 45429332 - 45429609
Alignment:
| Q |
13 |
tgacatggcaacaaatcatttgatgcttgtgtaaaataaatatacactaacatcagagtatgctaattaaattcttatcaatttacattttgaacataac |
112 |
Q |
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| T |
45429332 |
tgacatggcaacaaatcatttgatgcatgtgtaaaataaatatacactaacatcagagtatgctaattaaattcttatcaatttacattttgaacataac |
45429431 |
T |
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| Q |
113 |
atcaaatagttgattctcatttagaaaatttcagataaacttctacaaaacataccctgcaaagcaaaagagtaattttgggtatgaaactaagtttaac |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |
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| T |
45429432 |
atcaaatagttgattctcatttagaaaatttcagataaacttctacaaaacataccctacaaagcaaaagagtgattttgggtatgaaactaagtttaac |
45429531 |
T |
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| Q |
213 |
cagcacgaattgtatgtaattgtaagaaataagttgtacaaaatcaaaagagcatgctcaagtaacacttaccagtac |
290 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45429532 |
cagcacgaattgtatgtaattgtaagaaataagttgtacaaaatcaaaagagcatgctcaagtaacacttaccagtac |
45429609 |
T |
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