View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0904-INSERTION-5 (Length: 919)

Name: NF0904-INSERTION-5
Description: NF0904
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0904-INSERTION-5
NF0904-INSERTION-5
[»] chr5 (25 HSPs)
chr5 (8-909)||(36595619-36596533)
chr5 (174-277)||(4443972-4444078)
chr5 (177-282)||(9395357-9395465)
chr5 (177-282)||(11795175-11795283)
chr5 (177-282)||(36563553-36563661)
chr5 (170-282)||(13033058-13033173)
chr5 (177-277)||(23359954-23360057)
chr5 (177-243)||(966197-966263)
chr5 (177-282)||(13103031-13103139)
chr5 (177-282)||(17025631-17025739)
chr5 (177-274)||(18167334-18167434)
chr5 (177-282)||(37148970-37149078)
chr5 (177-282)||(41989422-41989530)
chr5 (177-243)||(2366353-2366419)
chr5 (177-282)||(20848081-20848188)
chr5 (177-275)||(3549562-3549663)
chr5 (177-268)||(6126845-6126939)
chr5 (177-282)||(37641960-37642069)
chr5 (196-282)||(582996-583085)
chr5 (177-240)||(14325879-14325942)
chr5 (177-216)||(18167334-18167373)
chr5 (198-288)||(26350386-26350479)
chr5 (170-220)||(11795176-11795226)
chr5 (170-220)||(26350422-26350472)
chr5 (170-220)||(36563610-36563660)
[»] chr2 (31 HSPs)
chr2 (170-288)||(12170407-12170528)
chr2 (177-243)||(16734832-16734898)
chr2 (177-282)||(3055565-3055673)
chr2 (177-282)||(13197725-13197833)
chr2 (177-282)||(15896849-15896957)
chr2 (177-282)||(37990028-37990136)
chr2 (177-282)||(41478654-41478762)
chr2 (177-282)||(44397554-44397662)
chr2 (177-282)||(44398693-44398801)
chr2 (177-277)||(15372238-15372341)
chr2 (177-282)||(6648534-6648642)
chr2 (177-282)||(16243798-16243906)
chr2 (177-277)||(41492911-41493014)
chr2 (177-220)||(4553082-4553125)
chr2 (177-244)||(9047770-9047837)
chr2 (177-244)||(12337952-12338019)
chr2 (177-275)||(13344498-13344599)
chr2 (177-244)||(38917537-38917604)
chr2 (177-282)||(16044332-16044440)
chr2 (170-220)||(30099254-30099304)
chr2 (177-282)||(37666625-37666733)
chr2 (177-277)||(36688894-36688997)
chr2 (177-288)||(13344499-13344613)
chr2 (177-229)||(20900727-20900779)
chr2 (176-282)||(4683946-4684055)
chr2 (170-221)||(16561072-16561123)
chr2 (177-244)||(44804593-44804660)
chr2 (177-227)||(13724117-13724167)
chr2 (173-227)||(29866574-29866628)
chr2 (177-282)||(30099197-30099305)
chr2 (170-220)||(31150661-31150711)
[»] chr8 (38 HSPs)
chr8 (174-288)||(33057595-33057712)
chr8 (177-282)||(32211378-32211486)
chr8 (177-282)||(39571218-39571326)
chr8 (177-282)||(54627-54735)
chr8 (177-282)||(2890177-2890285)
chr8 (177-282)||(6552662-6552770)
chr8 (177-282)||(7785793-7785901)
chr8 (177-282)||(12343155-12343263)
chr8 (177-282)||(32114490-32114598)
chr8 (177-282)||(33289276-33289384)
chr8 (177-282)||(43199369-43199477)
chr8 (177-288)||(31654614-31654728)
chr8 (174-288)||(8587171-8587288)
chr8 (177-282)||(3304293-3304401)
chr8 (177-282)||(7012178-7012286)
chr8 (177-282)||(7805714-7805822)
chr8 (177-282)||(15888367-15888475)
chr8 (177-282)||(25601015-25601123)
chr8 (177-243)||(27422239-27422305)
chr8 (177-282)||(44498202-44498310)
chr8 (170-243)||(13246802-13246875)
chr8 (177-220)||(28463626-28463669)
chr8 (177-274)||(12763669-12763769)
chr8 (177-218)||(8587185-8587226)
chr8 (171-216)||(24692054-24692099)
chr8 (177-233)||(13578916-13578972)
chr8 (170-222)||(24355115-24355167)
chr8 (176-216)||(28999124-28999164)
chr8 (177-288)||(32211364-32211478)
chr8 (176-282)||(17006918-17007027)
chr8 (170-213)||(17006919-17006962)
chr8 (176-282)||(17570220-17570329)
chr8 (170-213)||(17570285-17570328)
chr8 (170-288)||(25601001-25601122)
chr8 (174-220)||(12763726-12763772)
chr8 (177-274)||(28999063-28999163)
chr8 (179-216)||(15688047-15688084)
chr8 (179-228)||(26962835-26962884)
[»] chr3 (32 HSPs)
chr3 (170-288)||(33942940-33943061)
chr3 (177-282)||(38964399-38964507)
chr3 (177-288)||(17653713-17653827)
chr3 (177-288)||(37508922-37509036)
chr3 (177-288)||(46208031-46208145)
chr3 (177-282)||(4238601-4238709)
chr3 (177-243)||(9213565-9213631)
chr3 (177-282)||(10297986-10298094)
chr3 (177-282)||(19557067-19557175)
chr3 (177-282)||(21295341-21295449)
chr3 (177-282)||(22721938-22722046)
chr3 (177-282)||(34080045-34080153)
chr3 (177-282)||(44785411-44785519)
chr3 (177-282)||(49823396-49823504)
chr3 (177-274)||(51406688-51406788)
chr3 (185-285)||(8092592-8092695)
chr3 (177-277)||(8817401-8817504)
chr3 (177-282)||(2787847-2787955)
chr3 (177-282)||(40691011-40691119)
chr3 (177-274)||(42170361-42170461)
chr3 (177-282)||(48340404-48340512)
chr3 (177-277)||(9111509-9111612)
chr3 (174-288)||(36095692-36095809)
chr3 (177-282)||(8437432-8437540)
chr3 (170-244)||(26019488-26019562)
chr3 (170-220)||(33943004-33943054)
chr3 (177-282)||(42507370-42507478)
chr3 (181-229)||(31310016-31310064)
chr3 (174-288)||(51406685-51406802)
chr3 (177-227)||(5323272-5323322)
chr3 (174-220)||(42170418-42170464)
chr3 (180-229)||(33128224-33128273)
[»] scaffold0009 (1 HSPs)
scaffold0009 (177-282)||(49512-49620)
[»] chr4 (32 HSPs)
chr4 (177-282)||(3904698-3904806)
chr4 (177-282)||(6121908-6122016)
chr4 (174-282)||(3992983-3993094)
chr4 (177-277)||(41615691-41615794)
chr4 (177-282)||(20538701-20538809)
chr4 (177-282)||(42797739-42797847)
chr4 (177-282)||(47833618-47833726)
chr4 (177-282)||(47838632-47838740)
chr4 (170-282)||(24704377-24704492)
chr4 (177-288)||(40913204-40913318)
chr4 (177-288)||(43900550-43900664)
chr4 (177-277)||(3422073-3422175)
chr4 (177-244)||(5986924-5986991)
chr4 (177-282)||(3372128-3372236)
chr4 (177-282)||(48336270-48336378)
chr4 (177-282)||(51894597-51894705)
chr4 (177-282)||(53337377-53337485)
chr4 (173-275)||(17344227-17344332)
chr4 (177-275)||(33621810-33621911)
chr4 (177-275)||(46797739-46797840)
chr4 (175-229)||(6422530-6422584)
chr4 (177-282)||(7579317-7579425)
chr4 (177-227)||(38160387-38160437)
chr4 (170-244)||(45478140-45478214)
chr4 (177-231)||(50430433-50430487)
chr4 (177-282)||(52756682-52756790)
chr4 (177-277)||(41469781-41469884)
chr4 (172-288)||(41615677-41615796)
chr4 (176-220)||(50430490-50430534)
chr4 (173-216)||(23226014-23226057)
chr4 (201-282)||(33551208-33551292)
chr4 (177-243)||(45725905-45725971)
[»] chr1 (38 HSPs)
chr1 (177-274)||(12213489-12213589)
chr1 (177-282)||(12483643-12483751)
chr1 (177-288)||(11897055-11897169)
chr1 (177-277)||(17556764-17556868)
chr1 (177-282)||(9981654-9981762)
chr1 (177-282)||(14984844-14984952)
chr1 (177-282)||(27159373-27159481)
chr1 (177-282)||(31842810-31842918)
chr1 (177-282)||(34042703-34042811)
chr1 (177-243)||(37552190-37552256)
chr1 (177-282)||(39401981-39402089)
chr1 (177-282)||(44668108-44668216)
chr1 (177-282)||(44955221-44955329)
chr1 (177-282)||(47216714-47216822)
chr1 (177-282)||(11795940-11796048)
chr1 (177-274)||(11989796-11989896)
chr1 (177-282)||(26471080-26471188)
chr1 (182-282)||(23278021-23278124)
chr1 (177-277)||(25694331-25694434)
chr1 (177-277)||(47777496-47777599)
chr1 (174-218)||(12213548-12213592)
chr1 (177-216)||(11897069-11897108)
chr1 (174-288)||(16448120-16448237)
chr1 (197-244)||(33668777-33668824)
chr1 (176-274)||(47588351-47588452)
chr1 (177-282)||(1050895-1051003)
chr1 (181-227)||(5392211-5392257)
chr1 (170-243)||(1598390-1598461)
chr1 (172-220)||(11989791-11989839)
chr1 (171-243)||(30800474-30800546)
chr1 (177-216)||(16448184-16448223)
chr1 (177-220)||(23278073-23278116)
chr1 (177-220)||(34042711-34042754)
chr1 (198-245)||(47969742-47969789)
chr1 (185-215)||(11774536-11774566)
chr1 (170-216)||(21537945-21537991)
chr1 (174-220)||(47588409-47588455)
chr1 (177-206)||(17556767-17556796)
[»] chr7 (24 HSPs)
chr7 (177-277)||(9575421-9575524)
chr7 (177-288)||(7269420-7269534)
chr7 (177-282)||(1565744-1565852)
chr7 (177-282)||(1738462-1738570)
chr7 (177-282)||(7240756-7240864)
chr7 (177-282)||(31319414-31319522)
chr7 (177-282)||(38063928-38064036)
chr7 (177-282)||(46840867-46840975)
chr7 (170-282)||(94326-94441)
chr7 (177-277)||(9268768-9268871)
chr7 (170-282)||(36583402-36583517)
chr7 (177-288)||(22285700-22285814)
chr7 (177-288)||(36016211-36016325)
chr7 (177-282)||(7482232-7482340)
chr7 (177-282)||(23314154-23314262)
chr7 (177-244)||(40840134-40840201)
chr7 (174-216)||(7269481-7269523)
chr7 (173-231)||(36033237-36033295)
chr7 (177-282)||(38441467-38441575)
chr7 (174-219)||(958505-958550)
chr7 (177-244)||(33418424-33418491)
chr7 (177-282)||(4790255-4790363)
chr7 (177-282)||(28536766-28536874)
chr7 (177-222)||(2853741-2853786)
[»] scaffold1707 (1 HSPs)
scaffold1707 (177-284)||(1340-1450)
[»] chr6 (20 HSPs)
chr6 (177-282)||(2830342-2830450)
chr6 (177-282)||(6330122-6330230)
chr6 (177-282)||(8382984-8383092)
chr6 (177-282)||(11572160-11572268)
chr6 (177-282)||(26602330-26602438)
chr6 (177-282)||(35031016-35031124)
chr6 (177-277)||(13853608-13853711)
chr6 (174-234)||(3788095-3788155)
chr6 (177-282)||(8099537-8099645)
chr6 (177-282)||(9644703-9644811)
chr6 (177-282)||(9650720-9650828)
chr6 (177-282)||(33052809-33052917)
chr6 (177-273)||(28747149-28747248)
chr6 (177-282)||(6143561-6143669)
chr6 (177-274)||(8417808-8417908)
chr6 (177-244)||(17992036-17992103)
chr6 (170-220)||(6143562-6143612)
chr6 (174-220)||(8417865-8417911)
chr6 (177-219)||(13043773-13043815)
chr6 (177-234)||(22896520-22896577)
[»] scaffold0482 (1 HSPs)
scaffold0482 (177-282)||(12867-12975)
[»] scaffold0464 (1 HSPs)
scaffold0464 (177-282)||(6146-6254)
[»] scaffold0204 (1 HSPs)
scaffold0204 (177-282)||(23792-23900)
[»] scaffold0650 (1 HSPs)
scaffold0650 (178-243)||(1-66)
[»] scaffold0011 (1 HSPs)
scaffold0011 (177-288)||(231318-231432)
[»] scaffold0063 (1 HSPs)
scaffold0063 (170-229)||(53349-53408)


Alignment Details
Target: chr5 (Bit Score: 646; Significance: 0; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 646; E-Value: 0
Query Start/End: Original strand, 8 - 909
Target Start/End: Original strand, 36595619 - 36596533
Alignment:
Q  8 ataagctaaggatattgtcccttctttgggcggttgcaactgcatgactgcctaattaatatacatcgtgccacctctctttcacccagttcatcctatc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36595619 ataagctaaggatattgtcccttctttgggcggttgcaactgcatgactgcctaattaatatacatcgtgccacctctctttcacccagttcatcctatc 36595718  T
Q  108 ctttctggtagttagttagttggtgtggaaaaatccactcactctctcctgattaaatactccc-gatcttatttataagagaaagttaggtcaacaaaa 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  36595719 ctttctggtagttagttagttggtgtggaaaaatccactcactctctcctgattaaatactccccggtcttatttataagagaaagttaggtcaacaaaa 36595818  T
Q  207 attgatgtatttggttaaaaattcagtctagatacattttttgttgatcaaatattctcttataaataggaacggatgg--------------------a 286  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||                    |    
T  36595819 attgatgtatctgattaaaaattcagtctagatacattttttgttgatcaaatattctcttataaatatgatcggatggagtataagttaaaataactaa 36595918  T
Q  287 gttcaaacttaattaagtt-tgnnnnnnnnaacagctagttaagttgtttatattttagactca--gacataatttcnnnnnnncttataattaaatttg 383  Q
    ||||||||||||||||||| |         ||||||||||||||||||||||||||||||||||  |||||||||||       ||||||||||||||||    
T  36595919 gttcaaacttaattaagttgttttttttttaacagctagttaagttgtttatattttagactcatagacataatttctttttttcttataattaaatttg 36596018  T
Q  384 ttgggtctagggaaagattttagactcccacaacatgctgaatcaaaattcaaatctcaaaggaagatattattcacatttagtatctaacacgcttcga 483  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||    
T  36596019 ttgggtctagtgaaagattttagactcccacaacatgctgaatcaaaattcgaatcttaaaggaagatattattcacatttaatatctaacacgcttcga 36596118  T
Q  484 atatatgattacttccgctatttgaaaacccacaaagaattgagagaaagtataagtaatattataattaaaagaaggtgacacctaggcttaactaaat 583  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  36596119 atatacgattacttccgctacttgaaaacccacaaagaattgagagaaagtataagtaatattataattaaaagaaggtgacacctaggcttaactaatt 36596218  T
Q  584 ttgtaactggagtaaaaattaatttgtgagtatcattggtcgttaggtatgttatcacaattcttttaaagtgatctcgaaaaaaccttagaataaactt 683  Q
    |||||| |||||||||||||||||||||||||          |||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  36596219 ttgtaagtggagtaaaaattaatttgtgagta----------ttaggtttgttatcacaattcttttaaagtgatctag-aaaaaccttagaataaactt 36596307  T
Q  684 gattataaaaaacttttatttagatgatgaaaggtttttatatgttaagttgaaagcgcaatttttcattttacaggattttgagtacattgaggtgtat 783  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  36596308 gattataaaaaacttttatttagatgatgaaaggtttttatatgctaagttgaaagcgcaatttttcattttacaggattttgagtacattgaggtgttt 36596407  T
Q  784 agggttcgaatctcaacccttacatataacattacatctcattttcaaatgaatttgctcacacgaggaccgctattaattttgttgagaatataaagta 883  Q
    ||  ||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36596408 agtattcaaatctcaacccttacatataacattacatctcactgtcaaatgaatttgctcacacgaggaccgctattaattttgttgagaatataaagta 36596507  T
Q  884 gttttataatgtaattggagtattat 909  Q
    ||||||||||||||| ||| ||||||    
T  36596508 gttttataatgtaataggaatattat 36596533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 174 - 277
Target Start/End: Complemental strand, 4444078 - 4443972
Alignment:
Q  174 tcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttata 270  Q
    |||||||||||||||||  |||| ||||||||| ||||||||| |  |||||||||||||||| |||||||   ||||||||| | ||  ||||||||||    
T  4444078 tcttatttataagagaattttagatcaacaaaagttgatgtatctatttaaaaattcagtctaaatacattcacttttgttgacctaaatttctcttata 4443979  T
Q  271 aatagga 277  Q
    |||||||    
T  4443978 aatagga 4443972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 9395465 - 9395357
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  9395465 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 9395366  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  9395365 aggaccgga 9395357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 11795283 - 11795175
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  11795283 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 11795184  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  11795183 aggatcgga 11795175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 36563553 - 36563661
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  36563553 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 36563652  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  36563653 aggatcgga 36563661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 13033173 - 13033058
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctct 266  Q
    |||||| ||||||||||||||  || ||||||||||| ||||||||| |  |||||||||||||| | |||||||   ||||||||| | ||  ||||||    
T  13033173 ccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 13033074  T
Q  267 tataaataggaacgga 282  Q
    ||||||||||| ||||    
T  13033073 tataaataggaccgga 13033058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 23360057 - 23359954
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  23360057 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 23359958  T
Q  274 agga 277  Q
    ||||    
T  23359957 agga 23359954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 966263 - 966197
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat 243  Q
    ||||||||||||||| || | |||||||||||  |||||| ||||||||||||||||| ||||||||    
T  966263 tatttataagagaaatttggatcaacaaaaatgaatgtatctggttaaaaattcagtcaagatacat 966197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 13103139 - 13103031
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| |  |||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  13103139 tatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 13103040  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  13103039 aggaccgga 13103031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 17025739 - 17025631
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | |||||||||||||| || |||||||   |||||| || | ||  |||||||||||||    
T  17025739 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttctcttataaat 17025640  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  17025639 aggaccgga 17025631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 274
Target Start/End: Complemental strand, 18167434 - 18167334
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||| |||||| |||||||||||||||| ||||||| ||||||||| | || | ||||||   |||||||||||| ||  ||||||||| |||    
T  18167434 tatttataagaaaaagtttggtcaacaaaaattgacgtatttgattaaaaattaaatccatatacatcaatttttgttgatctaactttctcttattaat 18167335  T
Q  274 a 274  Q
    |    
T  18167334 a 18167334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 37148970 - 37149078
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||| ||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  37148970 tatttataatagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 37149069  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  37149070 aggaccgga 37149078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 41989422 - 41989530
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||| ||||    
T  41989422 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaat 41989521  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  41989522 aggaccgga 41989530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 2366353 - 2366419
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat 243  Q
    ||||||||||||||| || ||||||||| | || |||||||||||||||| ||||||| | ||||||    
T  2366353 tatttataagagaaatttgggtcaacaagagttcatgtatttggttaaaatttcagtccaaatacat 2366419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 20848188 - 20848081
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || || |||||||||||||||||| | ||||||||||||||| | |||||||   |||| |||| | ||  |||||||||||||    
T  20848188 tatttataagagaattttggg-caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaat 20848090  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  20848089 aggaccgga 20848081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 275
Target Start/End: Original strand, 3549562 - 3549663
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttga-tcaaatattctcttataaa 272  Q
    ||||||||||||||| |||  | ||||||| |||||||||| ||||||||||| || | ||||||||   |||||||||| | ||||| |||||||||||    
T  3549562 tatttataagagaaatttatattaacaaaagttgatgtattcggttaaaaatttagaccagatacattaatttttgttgactaaaata-tctcttataaa 3549660  T
Q  273 tag 275  Q
    |||    
T  3549661 tag 3549663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 268
Target Start/End: Complemental strand, 6126939 - 6126845
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctctta 268  Q
    ||||||||||||||  || ||||||||||| ||||||||| | |||||||||| |||| | ||||||   |||||||||||| ||  ||||||||    
T  6126939 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgatctaaatttctctta 6126845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 37642069 - 37641960
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat----tttttgttgatcaaatattctcttataaa 272  Q
    ||||||||||||||  || |||||| |||| ||||||||| | ||||||||||||||| | ||||||    ||||| |||| | ||  ||||||||||||    
T  37642069 tatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccacatacattcactttttattgacctaaatttctcttataaa 37641970  T
Q  273 taggaacgga 282  Q
    ||||| ||||    
T  37641969 taggaccgga 37641960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 583085 - 582996
Alignment:
Q  196 ggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaataggaacgga 282  Q
    ||||||||||| ||||||||| | ||||||||||||||| | |||||||   || |||||| | ||  ||||||||||||||||| ||||    
T  583085 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccgga 582996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 14325879 - 14325942
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagata 240  Q
    ||||||||||| ||| || | |||||||||||| ||||||||| || |||||| ||||||||||    
T  14325879 tatttataagaaaaaatttgatcaacaaaaattaatgtatttgattcaaaatttagtctagata 14325942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 18167334 - 18167373
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtat 216  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  18167334 tattaataagagaaagttagatcaacaaaaattgatgtat 18167373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 26350386 - 26350479
Alignment:
Q  198 tcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaataggaacggatggagt 288  Q
    |||| |||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  ||||||||||||||||| |||| |||||    
T  26350386 tcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggagggagt 26350479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 11795176 - 11795226
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttgg 220  Q
    |||||| ||||||||||||||| |||||||||||||| |  ||||||||||    
T  11795176 ccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgg 11795226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 26350472 - 26350422
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttgg 220  Q
    |||||| ||||||||||||||| |||||||||||||| |  ||||||||||    
T  26350472 ccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgg 26350422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 36563660 - 36563610
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttgg 220  Q
    |||||| ||||||||||||||| |||||||||||||| |  ||||||||||    
T  36563660 ccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgg 36563610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 1e-22; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 12170407 - 12170528
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctct 266  Q
    |||||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||||||| | |||||||   |||| |||| | ||| ||||||    
T  12170407 ccgatcttatttataagagaaacttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattaacttttattgacctaattttctct 12170506  T
Q  267 tataaataggaacggatggagt 288  Q
    | ||||||||| |||| |||||    
T  12170507 tgtaaataggatcggagggagt 12170528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 16734898 - 16734832
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat 243  Q
    ||||||||||||||||||  || ||||||| ||||||||||||||||||||||||||| ||||||||    
T  16734898 tatttataagagaaagttgagtaaacaaaagttgatgtatttggttaaaaattcagtccagatacat 16734832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 3055673 - 3055565
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  3055673 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 3055574  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  3055573 aggaccgga 3055565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 13197725 - 13197833
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  13197725 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 13197824  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  13197825 aggaccgga 13197833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 15896957 - 15896849
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  15896957 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 15896858  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  15896857 aggaccgga 15896849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 37990028 - 37990136
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  37990028 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 37990127  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  37990128 aggaccgga 37990136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 41478654 - 41478762
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  41478654 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 41478753  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  41478754 aggaccgga 41478762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 44397662 - 44397554
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  44397662 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 44397563  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  44397562 aggaccgga 44397554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 44398801 - 44398693
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  44398801 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 44398702  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  44398701 aggaccgga 44398693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 15372341 - 15372238
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  15372341 tatttataagagaattttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 15372242  T
Q  274 agga 277  Q
    ||||    
T  15372241 agga 15372238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 6648534 - 6648642
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | ||||||   ||| |||||| | ||  |||||||||||||    
T  6648534 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaat 6648633  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  6648634 aggaccgga 6648642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 16243798 - 16243906
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  || ||||||||||    
T  16243798 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaat 16243897  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  16243898 aggaccgga 16243906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 41492911 - 41493014
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||| || ||||||||||| ||||||||| | ||||||||||| ||| | |||||||   ||||||||| | ||  |||| ||||||||    
T  41492911 tatttataagagaaatttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttcttttataaat 41493010  T
Q  274 agga 277  Q
    ||||    
T  41493011 agga 41493014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 4553125 - 4553082
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttgg 220  Q
    |||||||||||||||||| ||||||||||||| |||||||||||    
T  4553125 tatttataagagaaagtttggtcaacaaaaatagatgtatttgg 4553082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 9047770 - 9047837
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt 244  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||    
T  9047770 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatt 9047837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 12337952 - 12338019
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt 244  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||    
T  12337952 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatt 12338019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 13344599 - 13344498
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || | ||||||||| ||||||||| | ||||||||||||||| | ||||||   |||||||||| | ||  |||||||||||||    
T  13344599 tatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaat 13344500  T
Q  274 ag 275  Q
    ||    
T  13344499 ag 13344498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 38917537 - 38917604
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt 244  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||    
T  38917537 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatt 38917604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 16044332 - 16044440
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||| ||| ||||||||| | ||||||||||||||  | |||||||   ||||||||| | ||  |||||||||||||    
T  16044332 tatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaat 16044431  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  16044432 aggaccgga 16044440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 30099304 - 30099254
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttgg 220  Q
    |||||| ||||||||||||||| ||||||||||||||||  ||||||||||    
T  30099304 ccgatcctatttataagagaaatttaggtcaacaaaaatgaatgtatttgg 30099254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 37666625 - 37666733
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||| ||| ||||||||| | ||||||||||||||  | |||||||   ||||||||| | ||  |||||||||||||    
T  37666625 tatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaat 37666724  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  37666725 aggaccgga 37666733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 36688997 - 36688894
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaat 273  Q
    |||| ||||| |||||| | |||||||||||||||||||| | ||| ||||||||| | ||||||||     |||||||| ||||  |||||||||||||    
T  36688997 tattgataagcgaaagtcaagtcaacaaaaattgatgtatcttgtttaaaattcagacaagatacatcaacgtttgttgaccaaactttctcttataaat 36688898  T
Q  274 agga 277  Q
    ||||    
T  36688897 agga 36688894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 288
Target Start/End: Original strand, 13344499 - 13344613
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||    || ||    ||||||||||    ||||||||||| || ||||||||||||||    
T  13344499 tatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaaaattctcttataaat 13344598  T
Q  274 aggaacggatggagt 288  Q
    |||| |||| |||||    
T  13344599 aggaccggagggagt 13344613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 20900779 - 20900727
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaatt 229  Q
    |||||| |||||| ||||||||||||||||||||| |||| ||||| ||||||    
T  20900779 tatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatt 20900727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 282
Target Start/End: Original strand, 4683946 - 4684055
Alignment:
Q  176 ttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaa 272  Q
    |||| ||||||||||  || |||  |||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  ||||||||||||    
T  4683946 ttatatataagagaattttcggtttacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaa 4684045  T
Q  273 taggaacgga 282  Q
    ||||| ||||    
T  4684046 taggaccgga 4684055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 16561123 - 16561072
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttggt 221  Q
    |||||| |||||||||||||||||| | |||||||| |||||| ||||||||    
T  16561123 ccgatcatatttataagagaaagtttgatcaacaaagattgatttatttggt 16561072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 44804593 - 44804660
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt 244  Q
    ||||||||||||||  ||| || ||||||| ||||||||| | ||||||||||||||| | |||||||    
T  44804593 tatttataagagaattttaagttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatt 44804660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 13724117 - 13724167
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaa 227  Q
    |||||| |||||| |  ||||||||||||| ||||||||||||||||||||    
T  13724117 tatttacaagagacatctaggtcaacaaaagttgatgtatttggttaaaaa 13724167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 29866628 - 29866574
Alignment:
Q  173 atcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaa 227  Q
    |||||||||||||||||||  |  ||||||| |||||||| ||||||||||||||    
T  29866628 atcttatttataagagaaatctgcgtcaacataaattgatatatttggttaaaaa 29866574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 30099197 - 30099305
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaat 273  Q
    ||||||| ||||||  || ||||||||||| ||||||||| |  ||||||||||| || | ||||||   |||||||||| | ||  |||||||||||||    
T  30099197 tatttattagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcaatccaaatacattcatttttgttgacctaaatttctcttataaat 30099296  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  30099297 aggatcgga 30099305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 31150661 - 31150711
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttgg 220  Q
    |||||| ||||||||||||||||||  |||||||||| || ||||||||||    
T  31150661 ccgatcctatttataagagaaagttgcgtcaacaaaagtttatgtatttgg 31150711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 2e-20; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 174 - 288
Target Start/End: Complemental strand, 33057712 - 33057595
Alignment:
Q  174 tcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagat---acattttttgttgatcaaatattctcttata 270  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||| ||  |||   ||| |||||||||||| ||  || |||||||    
T  33057712 tcttatttataagagaaagtttggtcaacaaaaattgatgtatctggttaaaatttcactccggatacaacaatttttgttgatccaactttgtcttata 33057613  T
Q  271 aataggaacggatggagt 288  Q
    ||||||| |||| |||||    
T  33057612 aataggaccggagggagt 33057595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 32211378 - 32211486
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||||||||||||| | ||||||||||||||| | ||||||   |||||||||| | ||  |||||||||||||    
T  32211378 tatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaat 32211477  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  32211478 aggaccgga 32211486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 39571218 - 39571326
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||||| ||  |||||||||||||    
T  39571218 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaat 39571317  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  39571318 aggaccgga 39571326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 54627 - 54735
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  54627 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 54726  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  54727 aggaccgga 54735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 2890177 - 2890285
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  2890177 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 2890276  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  2890277 aggaccgga 2890285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 6552770 - 6552662
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  6552770 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 6552671  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  6552670 aggaccgga 6552662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 7785793 - 7785901
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  7785793 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 7785892  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  7785893 aggaccgga 7785901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 12343155 - 12343263
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  12343155 tatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 12343254  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  12343255 aggaccgga 12343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 32114490 - 32114598
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||| ||  || ||||||||||||||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  32114490 tatttataagaaaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 32114589  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  32114590 aggaccgga 32114598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 33289276 - 33289384
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   || |||||||| ||  |||||||||||||    
T  33289276 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttctcttataaat 33289375  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  33289376 aggaccgga 33289384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 43199369 - 43199477
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  43199369 tatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 43199468  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  43199469 aggaccgga 43199477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 31654728 - 31654614
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||| ||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  31654728 tatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 31654629  T
Q  274 aggaacggatggagt 288  Q
    |||| |||| |||||    
T  31654628 aggaccggagggagt 31654614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 288
Target Start/End: Complemental strand, 8587288 - 8587171
Alignment:
Q  174 tcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttata 270  Q
    |||||||||||||||||| ||  ||||| |||| ||||||||| | |||||||||| |||| | ||||||    ||||||||| ||||  ||||||||||    
T  8587288 tcttatttataagagaaacttgagtcaataaaagttgatgtatctagttaaaaatttagtcaaaatacatcaacttttgttgaccaaactttctcttata 8587189  T
Q  271 aataggaacggatggagt 288  Q
    ||||||| |||| |||||    
T  8587188 aataggaccggagggagt 8587171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 3304293 - 3304401
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||| ||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  3304293 tatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 3304392  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  3304393 aggaccgga 3304401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 7012286 - 7012178
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || | ||||||||| ||||||||| | ||||||||||||||| | ||| |||   ||||||||||| ||  |||||||||||||    
T  7012286 tatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgatctaaatttctcttataaat 7012187  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  7012186 aggaccgga 7012178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 7805714 - 7805822
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||| ||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  7805714 tatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 7805813  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  7805814 aggaccgga 7805822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 15888367 - 15888475
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | |||||||||||| || | |||||||   ||||||||| | ||  |||||||||||||    
T  15888367 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaat 15888466  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  15888467 aggaccgga 15888475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 25601015 - 25601123
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| || |||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  25601015 tatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 25601114  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  25601115 aggatcgga 25601123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 27422305 - 27422239
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat 243  Q
    ||||||||||||||| || |||||||||||||  |||||| ||||||||||||||||| | ||||||    
T  27422305 tatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccaaatacat 27422239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 44498202 - 44498310
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || |||||| |||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  44498202 tatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 44498301  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  44498302 aggaccgga 44498310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 13246802 - 13246875
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat 243  Q
    |||||| ||||||||||||||| || | |||||||||||  |||||||||  ||||||||||||| ||||||||    
T  13246802 ccgatcctatttataagagaaatttggatcaacaaaaatgaatgtatttgactaaaaattcagtccagatacat 13246875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 28463626 - 28463669
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttgg 220  Q
    |||||||||||||||||| ||||||||||| |||||||||||||    
T  28463626 tatttataagagaaagttgggtcaacaaaagttgatgtatttgg 28463669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 274
Target Start/End: Original strand, 12763669 - 12763769
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||| ||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  12763669 tatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 12763768  T
Q  274 a 274  Q
    |    
T  12763769 a 12763769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 8587185 - 8587226
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtattt 218  Q
    |||||||||||||||||| ||||||||||| |||||||||||    
T  8587185 tatttataagagaaagtttggtcaacaaaagttgatgtattt 8587226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 24692099 - 24692054
Alignment:
Q  171 cgatcttatttataagagaaagttaggtcaacaaaaattgatgtat 216  Q
    ||||| ||||||||||| |||||||||||||||||| |||||||||    
T  24692099 cgatcctatttataagaaaaagttaggtcaacaaaagttgatgtat 24692054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 13578972 - 13578916
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagt 233  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||    
T  13578972 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagt 13578916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 24355115 - 24355167
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttggtt 222  Q
    |||||| ||| ||||| |||||||| |||||| ||||||||||||||||||||    
T  24355115 ccgatcatatatataaaagaaagttgggtcaataaaaattgatgtatttggtt 24355167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 28999164 - 28999124
Alignment:
Q  176 ttatttataagagaaagttaggtcaacaaaaattgatgtat 216  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  28999164 ttatttataaaagaaagtttggtcaacaaaaattgatgtat 28999124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 32211478 - 32211364
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||    || ||    ||||||||||   |||||||||| | || ||||||||||||||    
T  32211478 tatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaat 32211379  T
Q  274 aggaacggatggagt 288  Q
    |||| |||| |||||    
T  32211378 aggaccggagggagt 32211364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 282
Target Start/End: Complemental strand, 17007027 - 17006918
Alignment:
Q  176 ttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaa 272  Q
    |||||||||||||||| ||  ||||| |||| ||||||||| || |||| ||||||||| |||| |||    ||||||||| | ||  ||||||||||||    
T  17007027 ttatttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaa 17006928  T
Q  273 taggaacgga 282  Q
    ||||| ||||    
T  17006927 taggatcgga 17006918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 17006919 - 17006962
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatg 213  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||    
T  17006919 ccgatcctatttataagagaaagttgggtcaacaaaagttgatg 17006962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 282
Target Start/End: Original strand, 17570220 - 17570329
Alignment:
Q  176 ttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaa 272  Q
    |||||||||||||||| ||  ||||| |||| ||||||||| || |||| ||||||||| |||| |||    ||||||||| | ||  ||||||||||||    
T  17570220 ttatttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaa 17570319  T
Q  273 taggaacgga 282  Q
    ||||| ||||    
T  17570320 taggatcgga 17570329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 17570328 - 17570285
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatg 213  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||    
T  17570328 ccgatcctatttataagagaaagttgggtcaacaaaagttgatg 17570285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 288
Target Start/End: Complemental strand, 25601122 - 25601001
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctct 266  Q
    |||||| ||||||||||||||| |||||||||||||| |  ||||||||||    || ||    |||||||||||   ||||||||| | || |||||||    
T  25601122 ccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacccaaaattctct 25601023  T
Q  267 tataaataggaacggatggagt 288  Q
    ||||||||||| |||| |||||    
T  25601022 tataaataggaccggagggagt 25601001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 12763772 - 12763726
Alignment:
Q  174 tcttatttataagagaaagttaggtcaacaaaaattgatgtatttgg 220  Q
    |||||||||||||||||| |||||||||||||| |  ||||||||||    
T  12763772 tcttatttataagagaaatttaggtcaacaaaagtgaatgtatttgg 12763726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 274
Target Start/End: Original strand, 28999063 - 28999163
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaat 273  Q
    |||||||| || ||| ||| ||||| |||| || | |||| | ||||||||||||||||||||||||   |||||||||| ||||  |||| ||||||||    
T  28999063 tatttatatgaaaaatttaagtcaataaaagtttacgtatgtagttaaaaattcagtctagatacatcaatttttgttgaccaaactttcttttataaat 28999162  T
Q  274 a 274  Q
    |    
T  28999163 a 28999163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 15688047 - 15688084
Alignment:
Q  179 tttataagagaaagttaggtcaacaaaaattgatgtat 216  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  15688047 tttataagagaaagttgggtcaacaaaagttgatgtat 15688084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 26962884 - 26962835
Alignment:
Q  179 tttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaat 228  Q
    |||||||||||||  | ||||||| ||||||||||||||||||| |||||    
T  26962884 tttataagagaaaaattggtcaaccaaaattgatgtatttggttcaaaat 26962835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 6e-18; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 170 - 288
Target Start/End: Original strand, 33942940 - 33943061
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctct 266  Q
    |||||| ||||||||||||||| || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||| |    
T  33942940 ccgatcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttt 33943039  T
Q  267 tataaataggaacggatggagt 288  Q
    ||||||||||| |||| |||||    
T  33943040 tataaataggatcggaaggagt 33943061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 38964507 - 38964399
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||||| ||  |||||||||||||    
T  38964507 tatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaat 38964408  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  38964407 aggaccgga 38964399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 17653827 - 17653713
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  17653827 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 17653728  T
Q  274 aggaacggatggagt 288  Q
    |||| |||| |||||    
T  17653727 aggaccggagggagt 17653713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 37509036 - 37508922
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  37509036 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 37508937  T
Q  274 aggaacggatggagt 288  Q
    |||| |||| |||||    
T  37508936 aggaccggagggagt 37508922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 46208145 - 46208031
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  |||||||||||||| ||||||||| |  |||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  46208145 tatttataagagaattttaggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 46208046  T
Q  274 aggaacggatggagt 288  Q
    |||| |||| |||||    
T  46208045 aggaccggagggagt 46208031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 4238709 - 4238601
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  4238709 tatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 4238610  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  4238609 aggaccgga 4238601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 9213631 - 9213565
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat 243  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||| ||| | |||| ||||||||    
T  9213631 tatttattagagaaatttaggtcaacaaaaattgatgtatttggttataaaattagtccagatacat 9213565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 10298094 - 10297986
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  10298094 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 10297995  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  10297994 aggaccgga 10297986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 19557067 - 19557175
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  19557067 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 19557166  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  19557167 aggaccgga 19557175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 21295341 - 21295449
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  |||||||||||||| ||||||||| |  |||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  21295341 tatttataagagaattttaggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 21295440  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  21295441 aggaccgga 21295449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 22722046 - 22721938
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  22722046 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 22721947  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  22721946 aggaccgga 22721938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 34080045 - 34080153
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  34080045 tatttataagagaattttgggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 34080144  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  34080145 aggaccgga 34080153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 44785411 - 44785519
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  44785411 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 44785510  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  44785511 aggaccgga 44785519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 49823396 - 49823504
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  49823396 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 49823495  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  49823496 aggaccgga 49823504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 274
Target Start/End: Complemental strand, 51406788 - 51406688
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||||||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  51406788 tatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 51406689  T
Q  274 a 274  Q
    |    
T  51406688 a 51406688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 8092695 - 8092592
Alignment:
Q  185 agagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaataggaacgg 281  Q
    |||||||||| |||||||| || ||||||||| |||||||||||| |||| ||||||||    ||| ||||||  ||| ||||||||||||||||| |||    
T  8092695 agagaaagtttggtcaacagaagttgatgtatctggttaaaaatttagtcgagatacatcaactttagttgattcaattttctcttataaataggaccgg 8092596  T
Q  282 atgg 285  Q
    ||||    
T  8092595 atgg 8092592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 8817401 - 8817504
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  8817401 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 8817500  T
Q  274 agga 277  Q
    ||||    
T  8817501 agga 8817504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 2787847 - 2787955
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||| ||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  2787847 tatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 2787946  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  2787947 aggaccgga 2787955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 40691011 - 40691119
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||| | | ||  |||||||||||||    
T  40691011 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttctcttataaat 40691110  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  40691111 aggaccgga 40691119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 274
Target Start/End: Original strand, 42170361 - 42170461
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| |||||||||||||| || | |||||||   ||||||||| | ||  |||||||||||||    
T  42170361 tatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttataaat 42170460  T
Q  274 a 274  Q
    |    
T  42170461 a 42170461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 48340512 - 48340404
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  ||||||| |||||    
T  48340512 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttgtaaat 48340413  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  48340412 aggaccgga 48340404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 9111509 - 9111612
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||  | |||||||   ||||||||| | ||  |||||||||||||    
T  9111509 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaat 9111608  T
Q  274 agga 277  Q
    ||||    
T  9111609 agga 9111612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 288
Target Start/End: Original strand, 36095692 - 36095809
Alignment:
Q  174 tcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttata 270  Q
    ||||||||| |||||||  || | ||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  || |||||||    
T  36095692 tcttatttacaagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttatcttata 36095791  T
Q  271 aataggaacggatggagt 288  Q
    ||||||| |||| |||||    
T  36095792 aataggaccggagggagt 36095809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 8437540 - 8437432
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  ||  |||||||||| ||||||||| | ||||||||||||||| | |||||||   |||| |||| | ||  |||||||||||||    
T  8437540 tatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaat 8437441  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  8437440 aggaccgga 8437432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 26019488 - 26019562
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt 244  Q
    |||||| ||||||||||||||| || ||||||| ||| || |||||| ||||| |||||| |||| |||||||||    
T  26019488 ccgatcctatttataagagaaaatttggtcaaccaaagtttatgtatctggttcaaaatttagtcaagatacatt 26019562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 33943054 - 33943004
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttgg 220  Q
    |||||| ||||||||| |||||||||||||||||||| || ||||||||||    
T  33943054 ccgatcctatttataaaagaaagttaggtcaacaaaagttaatgtatttgg 33943004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 42507370 - 42507478
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||| ||||||||||| | |||||||   ||||||||| | ||  |||| ||||||||    
T  42507370 tatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctattataaat 42507469  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  42507470 aggaccgga 42507478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 31310016 - 31310064
Alignment:
Q  181 tataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaatt 229  Q
    ||||| ||||||||||||||| ||||||||||||||||| || ||||||    
T  31310016 tataaaagaaagttaggtcaataaaaattgatgtatttgatttaaaatt 31310064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 288
Target Start/End: Original strand, 51406685 - 51406802
Alignment:
Q  174 tcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttata 270  Q
    |||||||||||||||||| |||||||||||||| |  ||||||||||    || ||    ||||||||||   |||||||||| | || |||||||||||    
T  51406685 tcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattctcttata 51406784  T
Q  271 aataggaacggatggagt 288  Q
    ||||||| |||| |||||    
T  51406785 aataggaccggagggagt 51406802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 5323322 - 5323272
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaa 227  Q
    ||||||||||  ||| || ||||||||||| ||||||||||||||||||||    
T  5323322 tatttataagtaaaatttgggtcaacaaaagttgatgtatttggttaaaaa 5323272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 42170464 - 42170418
Alignment:
Q  174 tcttatttataagagaaagttaggtcaacaaaaattgatgtatttgg 220  Q
    |||||||||||||||||| |||||||||||||| |  ||||||||||    
T  42170464 tcttatttataagagaaatttaggtcaacaaaagtgaatgtatttgg 42170418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 33128224 - 33128273
Alignment:
Q  180 ttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaatt 229  Q
    |||||||||||| |||||||||||||| || ||||||| |||| ||||||    
T  33128224 ttataagagaaatttaggtcaacaaaagttaatgtattcggtttaaaatt 33128273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 49620 - 49512
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||||| ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  49620 tatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 49521  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  49520 aggaccgga 49512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 3904698 - 3904806
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||||||||||||||| ||||||||||||||| | |||||||   ||||||||| | ||  |||| ||||||||    
T  3904698 tatttataagagaattttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaat 3904797  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  3904798 aggaccgga 3904806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 6121908 - 6122016
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||||| ||  |||||||||||||    
T  6121908 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaat 6122007  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  6122008 aggaccgga 6122016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 174 - 282
Target Start/End: Complemental strand, 3993094 - 3992983
Alignment:
Q  174 tcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttata 270  Q
    |||||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  ||||||||||    
T  3993094 tcttatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttata 3992995  T
Q  271 aataggaacgga 282  Q
    ||||||| ||||    
T  3992994 aataggaccgga 3992983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 41615691 - 41615794
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||| || | ||||||||| ||||||||||| |||||||||| |||| | |||||||   ||||||||| | ||| |||||||||||||    
T  41615691 tatttataagagaaaattggatcaacaaaagttgatgtatttagttaaaaattaagtccaaatacattaacttttgttgacctaattttctcttataaat 41615790  T
Q  274 agga 277  Q
    ||||    
T  41615791 agga 41615794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 20538701 - 20538809
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  20538701 tatttataagagaattttgggtcaacaaaatttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 20538800  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  20538801 aggaccgga 20538809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 42797847 - 42797739
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  |||||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||| ||    
T  42797847 tatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttatatat 42797748  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  42797747 aggaccgga 42797739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 47833726 - 47833618
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  47833726 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 47833627  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  47833626 aggaccgga 47833618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 47838632 - 47838740
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  47838632 tatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaat 47838731  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  47838732 aggatcgga 47838740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 24704492 - 24704377
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctct 266  Q
    |||||| ||||||||||||||  || ||||||||||| || |||||| | ||||||||||||||| | |||||||   ||||||||| | ||  ||||||    
T  24704492 ccgatcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 24704393  T
Q  267 tataaataggaacgga 282  Q
    ||||||||||| ||||    
T  24704392 tataaataggaccgga 24704377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 288
Target Start/End: Original strand, 40913204 - 40913318
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||| || | ||||||||| ||||| |||   ||||||||||||||| | |||||||   ||||||||||| ||  |||||||||||||    
T  40913204 tatttataagagaaatttggatcaacaaaagttgatatatccagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaat 40913303  T
Q  274 aggaacggatggagt 288  Q
    |||| |||| |||||    
T  40913304 aggaccggagggagt 40913318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 43900664 - 43900550
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||| ||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  43900664 tatttataagagaattttgggttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttctcttataaat 43900565  T
Q  274 aggaacggatggagt 288  Q
    |||| |||| |||||    
T  43900564 aggaccggagggagt 43900550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 3422175 - 3422073
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt--ttttgttgatcaaatattctcttataaata 274  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||  | |||||||  ||||||||| | ||  ||||||||||||||    
T  3422175 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcattttgttgacctaaatttctcttataaata 3422076  T
Q  275 gga 277  Q
    |||    
T  3422075 gga 3422073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 5986991 - 5986924
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt 244  Q
    ||||||||||||||  || ||||||||||| ||||||||||| ||||||||||||||| | |||||||    
T  5986991 tatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacatt 5986924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 3372236 - 3372128
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||| ||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  3372236 tatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 3372137  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  3372136 aggaccgga 3372128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 48336378 - 48336270
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||| ||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  48336378 tatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 48336279  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  48336278 aggaccgga 48336270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 51894597 - 51894705
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| ||||||||||||||||| | | |||||   ||||||||| | ||  || ||||||||||    
T  51894597 tatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaaatttttcttataaat 51894696  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  51894697 aggaccgga 51894705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 53337485 - 53337377
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || |||||| |||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  53337485 tatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 53337386  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  53337385 aggaccgga 53337377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 275
Target Start/End: Complemental strand, 17344332 - 17344227
Alignment:
Q  173 atcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttat 269  Q
    ||||||||||||||||||| || | ||||||||| |||||||||  | |||||||||||||  ||||||||    ||||||||||  ||  |||||||||    
T  17344332 atcttatttataagagaaatttggatcaacaaaagttgatgtatccgattaaaaattcagttcagatacatcaacttttgttgatttaactttctcttat 17344233  T
Q  270 aaatag 275  Q
    ||||||    
T  17344232 aaatag 17344227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 33621911 - 33621810
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||| ||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  33621911 tatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 33621812  T
Q  274 ag 275  Q
    ||    
T  33621811 ag 33621810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 275
Target Start/End: Complemental strand, 46797840 - 46797739
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||| ||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  46797840 tatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 46797741  T
Q  274 ag 275  Q
    ||    
T  46797740 ag 46797739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 6422584 - 6422530
Alignment:
Q  175 cttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaatt 229  Q
    ||||||||||||||| | |||||||||||||||||||| ||||| ||| ||||||    
T  6422584 cttatttataagagatatttaggtcaacaaaaattgatatatttagtttaaaatt 6422530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 7579425 - 7579317
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | |||||||||||| || | |||||||   ||||||| | | ||  |||||||||||||    
T  7579425 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttctcttataaat 7579326  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  7579325 aggaccgga 7579317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 38160387 - 38160437
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaa 227  Q
    ||||||||||||| | |||||||||||||||||||||||| || |||||||    
T  38160387 tatttataagagagatttaggtcaacaaaaattgatgtatctgattaaaaa 38160437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 45478214 - 45478140
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt 244  Q
    |||||| |||||||||||||||  | |||||| |||| |||||||||  |||||||||||||||  |||||||||    
T  45478214 ccgatcctatttataagagaaatgtgggtcaataaaagttgatgtatccggttaaaaattcagttgagatacatt 45478140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 50430433 - 50430487
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattca 231  Q
    ||||||||||| | | || ||||||||||||||||||||| ||||||||||||||    
T  50430433 tatttataagatatatttgggtcaacaaaaattgatgtatctggttaaaaattca 50430487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 52756790 - 52756682
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||| ||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   || |||||| | ||  |||||||||||||    
T  52756790 tatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaat 52756691  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  52756690 aggaccgga 52756682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 41469781 - 41469884
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| |  |||||||||||||| | |||||||   ||||||||| | ||  |||| ||||||||    
T  41469781 tatttataagagaatttttggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaat 41469880  T
Q  274 agga 277  Q
    ||||    
T  41469881 agga 41469884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 288
Target Start/End: Complemental strand, 41615796 - 41615677
Alignment:
Q  172 gatcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctctta 268  Q
    |||| ||||||||||||||| |||||||||||||| || ||||||||||    || ||    ||| ||||||    ||||||||||| ||| ||||||||    
T  41615796 gatcctatttataagagaaaattaggtcaacaaaagttaatgtatttggacttaatttttaactaaatacatcaacttttgttgatccaattttctctta 41615697  T
Q  269 taaataggaacggatggagt 288  Q
    ||||||||| ||||||||||    
T  41615696 taaataggaccggatggagt 41615677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 50430534 - 50430490
Alignment:
Q  176 ttatttataagagaaagttaggtcaacaaaaattgatgtatttgg 220  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||    
T  50430534 ttatttataagagcaagttgggtcaacaaaagttgatgtatttgg 50430490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 23226014 - 23226057
Alignment:
Q  173 atcttatttataagagaaagttaggtcaacaaaaattgatgtat 216  Q
    ||||||||||||||||| | |||| |||||||||||||||||||    
T  23226014 atcttatttataagagatatttagatcaacaaaaattgatgtat 23226057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 33551292 - 33551208
Alignment:
Q  201 acaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaataggaacgga 282  Q
    |||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  ||||||||||||||||| ||||    
T  33551292 acaaaagttgatgtatctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 33551208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 45725971 - 45725905
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat 243  Q
    ||||||||||||||||||  |||||||||| || | |||||| ||||| |||| |||||| ||||||    
T  45725971 tatttataagagaaagtttcgtcaacaaaagttaacgtatttagttaagaatttagtctaaatacat 45725905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 2e-17; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 274
Target Start/End: Original strand, 12213489 - 12213589
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaat 273  Q
    ||||||| ||||||| || ||||||||||||||||| ||||| |||||||||||| |||| ||||||   |||||||||| | || ||||||||||||||    
T  12213489 tatttattagagaaacttgggtcaacaaaaattgatttatttagttaaaaattcaatctaaatacattaatttttgttgacctaacattctcttataaat 12213588  T
Q  274 a 274  Q
    |    
T  12213589 a 12213589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 12483643 - 12483751
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||||| ||| ||||||||||||| |||||||   ||||||||| | ||  |||||||||||||    
T  12483643 tatttataagagaattttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaat 12483742  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  12483743 aggaccgga 12483751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 11897169 - 11897055
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||| || ||||||||||| |||||||||  |||||||||||||||  ||||||||    ||||||||| | ||  |||||||||||||    
T  11897169 tatttataagagaaatttgggtcaacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgacctaactttctcttataaat 11897070  T
Q  274 aggaacggatggagt 288  Q
    |||| |||| |||||    
T  11897069 aggaccggagggagt 11897055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 17556868 - 17556764
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt----ttttgttgatcaaatattctcttataaa 272  Q
    ||||||||||||||| || ||||||||||| ||||||||| | ||||||||||||||| | |||||||    ||||||||| | ||  ||||||||||||    
T  17556868 tatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgacctaactttctcttataaa 17556769  T
Q  273 tagga 277  Q
    |||||    
T  17556768 tagga 17556764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 9981762 - 9981654
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  9981762 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 9981663  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  9981662 aggaccgga 9981654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 14984952 - 14984844
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  14984952 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 14984853  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  14984852 aggaccgga 14984844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 27159373 - 27159481
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  27159373 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 27159472  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  27159473 aggaccgga 27159481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 31842810 - 31842918
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  31842810 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 31842909  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  31842910 aggaccgga 31842918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 34042811 - 34042703
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | ||||||   |||||||||| | ||  |||||||||||||    
T  34042811 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaat 34042712  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  34042711 aggaccgga 34042703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 37552256 - 37552190
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat 243  Q
    ||||||||||||||| || |||||||||||||  |||||| ||||||||||||||||| ||||||||    
T  37552256 tatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccagatacat 37552190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 39401981 - 39402089
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  39401981 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 39402080  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  39402081 aggaccgga 39402089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 44668108 - 44668216
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  44668108 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 44668207  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  44668208 aggaccgga 44668216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 44955221 - 44955329
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  |||||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  || ||||||||||    
T  44955221 tatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaat 44955320  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  44955321 aggaccgga 44955329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 47216714 - 47216822
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  47216714 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 47216813  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  47216814 aggaccgga 47216822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 11796048 - 11795940
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | || ||||   ||||||||| | ||  |||||||||||||    
T  11796048 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaat 11795949  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  11795948 aggaccgga 11795940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 274
Target Start/End: Complemental strand, 11989896 - 11989796
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaat 273  Q
    ||||||||| ||||| ||  ||||| |||||||||||||||||||||||||||||||| | ||| ||   |||||||||| | ||  |||||||||||||    
T  11989896 tatttataaaagaaatttgagtcaataaaaattgatgtatttggttaaaaattcagtccaaatatattagtttttgttgacccaactttctcttataaat 11989797  T
Q  274 a 274  Q
    |    
T  11989796 a 11989796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 26471080 - 26471188
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || | ||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  26471080 tatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 26471179  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  26471180 aggaccgga 26471188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 23278021 - 23278124
Alignment:
Q  182 ataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaataggaa 278  Q
    |||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | ||||||   |||||||||| | ||  |||||||||||||||||     
T  23278021 ataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggac 23278120  T
Q  279 cgga 282  Q
    ||||    
T  23278121 cgga 23278124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 25694434 - 25694331
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | |||||||||||| || | |||||||   |||| |||||| ||  |||||||||||||    
T  25694434 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgatctaaatttctcttataaat 25694335  T
Q  274 agga 277  Q
    ||||    
T  25694334 agga 25694331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 47777496 - 47777599
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||| ||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  47777496 tatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 47777595  T
Q  274 agga 277  Q
    ||||    
T  47777596 agga 47777599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 12213592 - 12213548
Alignment:
Q  174 tcttatttataagagaaagttaggtcaacaaaaattgatgtattt 218  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||    
T  12213592 tcttatttataagagaatgttaggtcaacaaaaattaatgtattt 12213548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 11897069 - 11897108
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtat 216  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  11897069 tatttataagagaaagttaggtcaacaaaagttgatgtat 11897108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 288
Target Start/End: Original strand, 16448120 - 16448237
Alignment:
Q  174 tcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttata 270  Q
    ||||||||||| | |||  || ||||||||||| || |||||| ||||| ||||||||||| ||||||||    ||||||||| | ||  ||||||||||    
T  16448120 tcttatttataggggaatattgggtcaacaaaagtttatgtatctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttata 16448219  T
Q  271 aataggaacggatggagt 288  Q
    ||||||| |||| |||||    
T  16448220 aataggaccggagggagt 16448237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 33668824 - 33668777
Alignment:
Q  197 gtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt 244  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||||    
T  33668824 gtcaacaaaaagtaatgcatttggttaaaaattcagtctagatacatt 33668777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 274
Target Start/End: Original strand, 47588351 - 47588452
Alignment:
Q  176 ttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaa 272  Q
    |||||||||||||||  || ||||||||||| ||||||||| |  |||||||||||||| | |||||||   ||||||||| | ||  ||||||||||||    
T  47588351 ttatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaa 47588450  T
Q  273 ta 274  Q
    ||    
T  47588451 ta 47588452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 1051003 - 1050895
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||| ||| ||||||||| | ||||||||||||||| | || ||||   ||||||||| | ||  |||||||||||||    
T  1051003 tatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaat 1050904  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  1050903 aggaccgga 1050895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 5392257 - 5392211
Alignment:
Q  181 tataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaa 227  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||    
T  5392257 tataagagaaatttaggtcaataaaagttgatgtatttggttaaaaa 5392211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 1598390 - 1598461
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat 243  Q
    |||||| |||||||||||||||  | ||||||||||||||||||||| | ||||||||||||||| | ||||||    
T  1598390 ccgatcctatttataagagaaatat-ggtcaacaaaaattgatgtatat-gttaaaaattcagtccaaatacat 1598461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 11989791 - 11989839
Alignment:
Q  172 gatcttatttataagagaaagttaggtcaacaaaaattgatgtatttgg 220  Q
    ||||||||||||||||||||||| |||||||||||| | || |||||||    
T  11989791 gatcttatttataagagaaagttgggtcaacaaaaactaatatatttgg 11989839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 30800546 - 30800474
Alignment:
Q  171 cgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat 243  Q
    |||||||||||| | ||||| ||| ||| ||||||| ||||||||| || || |||||||||| |||||||||    
T  30800546 cgatcttatttacatgagaacgttgggttaacaaaagttgatgtatctgattcaaaattcagtatagatacat 30800474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 16448223 - 16448184
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtat 216  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  16448223 tatttataagagaaagttgggtcaacaaaagttgatgtat 16448184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 23278116 - 23278073
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttgg 220  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||    
T  23278116 tatttataagagaaatttaggtcaacaaaaatgaatgtatttgg 23278073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 34042711 - 34042754
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttgg 220  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||    
T  34042711 tatttataagagaaatttaggtcaacaaaaatgaatgtatttgg 34042754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 245
Target Start/End: Complemental strand, 47969789 - 47969742
Alignment:
Q  198 tcaacaaaaattgatgtatttggttaaaaattcagtctagatacattt 245  Q
    ||||||||| ||||||||| | ||||||||||||||||| ||||||||    
T  47969789 tcaacaaaagttgatgtatctagttaaaaattcagtctaaatacattt 47969742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 215
Target Start/End: Original strand, 11774536 - 11774566
Alignment:
Q  185 agagaaagttaggtcaacaaaaattgatgta 215  Q
    |||||||||||||||||||||||||||||||    
T  11774536 agagaaagttaggtcaacaaaaattgatgta 11774566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 21537991 - 21537945
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtat 216  Q
    |||||||||||||||||||||| ||  |||||||||| |||||||||    
T  21537991 ccgatcttatttataagagaaaattgagtcaacaaaagttgatgtat 21537945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 47588455 - 47588409
Alignment:
Q  174 tcttatttataagagaaagttaggtcaacaaaaattgatgtatttgg 220  Q
    |||||||||||||||||| |||||||||||||| |  ||||||||||    
T  47588455 tcttatttataagagaaatttaggtcaacaaaagtgaatgtatttgg 47588409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 17556767 - 17556796
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaa 206  Q
    ||||||||||||||||||||||||||||||    
T  17556767 tatttataagagaaagttaggtcaacaaaa 17556796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 9e-17; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 9575524 - 9575421
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    |||||||||||||||||| ||||||||||| ||||||||| | ||||||||||||||||| |||| ||   ||||||||| | ||  |||||||| ||||    
T  9575524 tatttataagagaaagtttggtcaacaaaacttgatgtatctagttaaaaattcagtctaaatacgttaacttttgttgacccaactttctcttacaaat 9575425  T
Q  274 agga 277  Q
    ||||    
T  9575424 agga 9575421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 177 - 288
Target Start/End: Original strand, 7269420 - 7269534
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaat 273  Q
    |||||||||||||||||| ||| ||||||| |||||| || |||||||||||||||| |||||||||   |||||||||| | ||  || ||||||||||    
T  7269420 tatttataagagaaagttgggttaacaaaagttgatgcatctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttcttataaat 7269519  T
Q  274 aggaacggatggagt 288  Q
    | || |||| |||||    
T  7269520 aagaccggagggagt 7269534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 1565744 - 1565852
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  1565744 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 1565843  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  1565844 aggaccgga 1565852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 1738462 - 1738570
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  1738462 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 1738561  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  1738562 aggaccgga 1738570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 7240864 - 7240756
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  7240864 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 7240765  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  7240764 aggaccgga 7240756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 31319414 - 31319522
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  31319414 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 31319513  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  31319514 aggaccgga 31319522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 38063928 - 38064036
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  38063928 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 38064027  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  38064028 aggaccgga 38064036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 46840975 - 46840867
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  46840975 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 46840876  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  46840875 aggaccgga 46840867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 94326 - 94441
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctct 266  Q
    |||||| ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||| ||| | |||||||   ||||||||| | ||  ||||||    
T  94326 ccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttctct 94425  T
Q  267 tataaataggaacgga 282  Q
    ||||||||||| ||||    
T  94426 tataaataggaccgga 94441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 9268871 - 9268768
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  9268871 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 9268772  T
Q  274 agga 277  Q
    ||||    
T  9268771 agga 9268768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 36583517 - 36583402
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctct 266  Q
    |||||| ||||||||||||||  || ||||||||||| ||||||||| | |||||||||| |||| | |||||||   ||||||||| | ||  ||||||    
T  36583517 ccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttctct 36583418  T
Q  267 tataaataggaacgga 282  Q
    ||||||||||| ||||    
T  36583417 tataaataggaccgga 36583402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 22285814 - 22285700
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| |  |||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  22285814 tatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 22285715  T
Q  274 aggaacggatggagt 288  Q
    |||| |||| |||||    
T  22285714 aggaccggagggagt 22285700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 288
Target Start/End: Original strand, 36016211 - 36016325
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| |  |||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  36016211 tatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 36016310  T
Q  274 aggaacggatggagt 288  Q
    |||| |||| |||||    
T  36016311 aggaccggagggagt 36016325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 7482340 - 7482232
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||  | |||||||   ||||||||| | ||  |||||||||||||    
T  7482340 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaat 7482241  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  7482240 aggaccgga 7482232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 23314154 - 23314262
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||| ||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  23314154 tatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 23314253  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  23314254 aggaccgga 23314262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 40840134 - 40840201
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt 244  Q
    ||||||||||||||| ||  |||||||||| |||||||| || ||||||||||||||| | |||||||    
T  40840134 tatttataagagaaatttttgtcaacaaaagttgatgtacttagttaaaaattcagtccaaatacatt 40840201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 7269523 - 7269481
Alignment:
Q  174 tcttatttataagagaaagttaggtcaacaaaaattgatgtat 216  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  7269523 tcttatttataagaaaaagttgggtcaacaaaaattgatgtat 7269481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 36033237 - 36033295
Alignment:
Q  173 atcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattca 231  Q
    ||||||||||||||| ||| |||||||||||||| ||||||||| || | |||||||||    
T  36033237 atcttatttataagataaatttaggtcaacaaaagttgatgtatctgatcaaaaattca 36033295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 38441575 - 38441467
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||  | |||||||   |||||||||   ||  |||||||||||||    
T  38441575 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacataaatttctcttataaat 38441476  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  38441475 aggaccgga 38441467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 958550 - 958505
Alignment:
Q  174 tcttatttataagagaaagttaggtcaacaaaaattgatgtatttg 219  Q
    |||||||||||||||| | |||||||||||||||||||| ||||||    
T  958550 tcttatttataagagatatttaggtcaacaaaaattgatatatttg 958505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 33418491 - 33418424
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt 244  Q
    ||||||||||||||  || ||||||||||| ||||||||| |  |||||||||||||| | |||||||    
T  33418491 tatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacatt 33418424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 4790363 - 4790255
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || |||||| |||| ||||||||| | |||||||||| |||| | ||||||   |||||||||| | ||  || ||||||||||    
T  4790363 tatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgacctaaatttttcttataaat 4790264  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  4790263 aggaccgga 4790255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 28536766 - 28536874
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || | |||| |||| ||||||||| | |||||||||||| || | |||||||   ||||||||| | ||  |||||||||||||    
T  28536766 tatttataagagaattttggatcaataaaagttgatgtatctagttaaaaattcattccaaatacattcacttttgttgacctaaatttctcttataaat 28536865  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  28536866 aggaccgga 28536874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 2853786 - 2853741
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggtt 222  Q
    ||||||||| ||| |||| ||||||||||||||||||||| |||||    
T  2853786 tatttataaaagatagtttggtcaacaaaaattgatgtatatggtt 2853741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 177 - 284
Target Start/End: Complemental strand, 1450 - 1340
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  1450 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 1351  T
Q  274 aggaacggatg 284  Q
    |||| ||||||    
T  1350 aggaccggatg 1340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 2830450 - 2830342
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  2830450 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 2830351  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  2830350 aggaccgga 2830342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 6330230 - 6330122
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  6330230 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 6330131  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  6330130 aggaccgga 6330122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 8382984 - 8383092
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  8382984 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 8383083  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  8383084 aggaccgga 8383092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 11572160 - 11572268
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  11572160 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 11572259  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  11572260 aggaccgga 11572268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 26602438 - 26602330
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  26602438 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 26602339  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  26602338 aggaccgga 26602330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 35031016 - 35031124
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||||||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  || ||||||||||    
T  35031016 tatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaat 35031115  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  35031116 aggaccgga 35031124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 13853608 - 13853711
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  13853608 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 13853707  T
Q  274 agga 277  Q
    ||||    
T  13853708 agga 13853711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 3788155 - 3788095
Alignment:
Q  174 tcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtc 234  Q
    |||||||||||||| ||| |||||||||||||| ||||||||||| ||||| |||||||||    
T  3788155 tcttatttataagataaatttaggtcaacaaaagttgatgtatttagttaacaattcagtc 3788095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 8099645 - 8099537
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | |||||||||||| || | |||||||   ||||||||| | ||  |||||||||||||    
T  8099645 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaat 8099546  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  8099545 aggaccgga 8099537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 9644811 - 9644703
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | ||||||   ||| |||||| | ||  |||||||||||||    
T  9644811 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaat 9644712  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  9644711 aggaccgga 9644703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 9650828 - 9650720
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | ||||||||||||||| | ||||||   ||| |||||| | ||  |||||||||||||    
T  9650828 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaat 9650729  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  9650728 aggaccgga 9650720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 33052809 - 33052917
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || |||||| |||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  33052809 tatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 33052908  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  33052909 aggaccgga 33052917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 273
Target Start/End: Original strand, 28747149 - 28747248
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| |  |||||||||||||| | |||||||   ||||||||||| ||  |||||||||||||    
T  28747149 tatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 6143669 - 6143561
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || || |||||||| ||||||||| | |||||||||||| || | |||||||   ||||||||| | ||  |||||||||||||    
T  6143669 tatttataagagaattttgggacaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaat 6143570  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  6143569 aggatcgga 6143561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 274
Target Start/End: Original strand, 8417808 - 8417908
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||||||||| ||||||||| | |||||||||||| || | |||||||   ||||||||| | ||  |||||||||||||    
T  8417808 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaat 8417907  T
Q  274 a 274  Q
    |    
T  8417908 a 8417908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 17992103 - 17992036
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt 244  Q
    ||||||||||||||  || ||||||||||||| ||||||| | |||||||||||| || | |||||||    
T  17992103 tatttataagagaattttgggtcaacaaaaatcgatgtatctagttaaaaattcaatccaaatacatt 17992036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 6143562 - 6143612
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttgg 220  Q
    |||||| ||||||||||||||| |||||||||||||| |  ||||||||||    
T  6143562 ccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgg 6143612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 8417911 - 8417865
Alignment:
Q  174 tcttatttataagagaaagttaggtcaacaaaaattgatgtatttgg 220  Q
    |||||||||||||||||| |||||||||||||| |  ||||||||||    
T  8417911 tcttatttataagagaaatttaggtcaacaaaagtgaatgtatttgg 8417865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 13043773 - 13043815
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttg 219  Q
    ||||||||||||||| ||||||||||||||||  |||||||||    
T  13043773 tatttataagagaaatttaggtcaacaaaaatgaatgtatttg 13043815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 22896577 - 22896520
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtc 234  Q
    ||||||||||||||  ||  |||||||||| ||||||||| | |||||||||||||||    
T  22896577 tatttataagagaattttttgtcaacaaaagttgatgtatctagttaaaaattcagtc 22896520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 12975 - 12867
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||||||  || ||||| ||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  12975 tatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 12876  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  12875 aggaccgga 12867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 6146 - 6254
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||| ||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  6146 tatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccacatacattcacttttgttgacctaaatttctcttataaat 6245  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  6246 aggaccgga 6254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 23900 - 23792
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacatt---ttttgttgatcaaatattctcttataaat 273  Q
    ||||||||||| ||  || ||||||||||| ||||||||| | ||||||||||||||| | |||||||   ||||||||| | ||  |||||||||||||    
T  23900 tatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 23801  T
Q  274 aggaacgga 282  Q
    |||| ||||    
T  23800 aggaccgga 23792  T

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Target: scaffold0650 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 1 - 66
Alignment:
Q  178 atttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat 243  Q
    ||||||||||||||||   |||||||||| |||||||||||||||||||||| |||| | ||||||    
T  1 atttataagagaaagtcgagtcaacaaaagttgatgtatttggttaaaaatttagtccaaatacat 66  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 288
Target Start/End: Original strand, 231318 - 231432
Alignment:
Q  177 tatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaattcagtctagatacat---tttttgttgatcaaatattctcttataaat 273  Q
    |||||||| |||||  |||||||||||||| ||||| ||  | ||| ||||||||||| ||||||||    ||||||||||| ||  ||||||||||| |    
T  231318 tatttataggagaatattaggtcaacaaaagttgatatacctagttcaaaattcagtccagatacataaacttttgttgatccaactttctcttataatt 231417  T
Q  274 aggaacggatggagt 288  Q
    |||| |||| |||||    
T  231418 aggatcggagggagt 231432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 53349 - 53408
Alignment:
Q  170 ccgatcttatttataagagaaagttaggtcaacaaaaattgatgtatttggttaaaaatt 229  Q
    |||||||||||||||| |||||||| ||  ||||||| ||||||||| | ||||||||||    
T  53349 ccgatcttatttataaaagaaagtttggataacaaaagttgatgtatctcgttaaaaatt 53408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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