View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0905_low_24 (Length: 334)
Name: NF0905_low_24
Description: NF0905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0905_low_24 |
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Alignment Details
Target: chr2 (Bit Score: 163; Significance: 5e-87; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 96 - 262
Target Start/End: Original strand, 28524220 - 28524386
Alignment:
| Q |
96 |
ggaacaataaaagtagatgatagcgtttagacaaaggattgaatacccaacttgaataggtaatagtaaactgatcatgtagataaaaagcatgacaaat |
195 |
Q |
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| T |
28524220 |
ggaacaataaaagtagatgatagcgtttagacaaaggattgaatacccaacttgaataggtaatagtaaactgatcatgtagataaaaagcatgacaaat |
28524319 |
T |
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| Q |
196 |
ctaagagcaatggatctcacatgtttcatagagatacaaaagaaagtgtactatggaagagaataat |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
28524320 |
ctaagagcaatggatctcacatgtttcatagagatacaaaagaatgtgtactatggaagagaataat |
28524386 |
T |
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