View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0905_low_31 (Length: 313)

Name: NF0905_low_31
Description: NF0905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0905_low_31
NF0905_low_31
[»] scaffold0025 (1 HSPs)
scaffold0025 (95-241)||(14977-15123)
[»] chr3 (14 HSPs)
chr3 (95-241)||(24192272-24192418)
chr3 (95-273)||(41455687-41455868)
chr3 (151-285)||(16802041-16802175)
chr3 (151-255)||(55499700-55499804)
chr3 (153-312)||(13324376-13324535)
chr3 (89-244)||(18914491-18914646)
chr3 (128-281)||(14865184-14865338)
chr3 (89-205)||(17241085-17241201)
chr3 (209-312)||(13302844-13302947)
chr3 (209-312)||(13313520-13313623)
chr3 (93-162)||(10390034-10390104)
chr3 (93-162)||(10415123-10415193)
chr3 (93-162)||(10421793-10421863)
chr3 (201-285)||(17243260-17243343)
[»] chr6 (21 HSPs)
chr6 (95-294)||(29614738-29614934)
chr6 (92-287)||(12167637-12167832)
chr6 (92-287)||(19286546-19286741)
chr6 (94-287)||(19877730-19877923)
chr6 (92-287)||(19883506-19883701)
chr6 (92-239)||(34640575-34640723)
chr6 (92-239)||(34647249-34647397)
chr6 (92-287)||(19786455-19786650)
chr6 (92-252)||(25470290-25470451)
chr6 (94-222)||(21365067-21365195)
chr6 (94-222)||(23969049-23969177)
chr6 (151-312)||(18799759-18799920)
chr6 (151-285)||(21565765-21565899)
chr6 (151-312)||(25396493-25396654)
chr6 (122-312)||(19471891-19472080)
chr6 (111-222)||(20008493-20008604)
chr6 (209-285)||(9186827-9186903)
chr6 (146-263)||(19300317-19300434)
chr6 (209-306)||(24513456-24513553)
chr6 (92-145)||(24513370-24513423)
chr6 (158-202)||(24513425-24513469)
[»] chr2 (16 HSPs)
chr2 (95-305)||(26583103-26583313)
chr2 (92-239)||(5706610-5706758)
chr2 (89-285)||(23878286-23878481)
chr2 (89-312)||(23062993-23063216)
chr2 (151-265)||(23089608-23089722)
chr2 (151-255)||(21907744-21907848)
chr2 (151-265)||(23102036-23102150)
chr2 (142-281)||(29281336-29281475)
chr2 (111-219)||(9978-10086)
chr2 (166-312)||(24660886-24661032)
chr2 (111-222)||(25181446-25181557)
chr2 (127-263)||(26884564-26884701)
chr2 (209-312)||(23264421-23264524)
chr2 (89-145)||(23264557-23264613)
chr2 (173-263)||(27208318-27208408)
chr2 (173-263)||(27210653-27210743)
[»] chr7 (19 HSPs)
chr7 (95-305)||(13742966-13743174)
chr7 (92-287)||(13006706-13006901)
chr7 (95-288)||(13123506-13123698)
chr7 (92-238)||(12591230-12591377)
chr7 (89-312)||(13678772-13678995)
chr7 (89-285)||(16676660-16676845)
chr7 (89-285)||(17650896-17651081)
chr7 (95-288)||(12710435-12710627)
chr7 (94-222)||(3857953-3858082)
chr7 (151-255)||(11389922-11390026)
chr7 (111-255)||(20311597-20311740)
chr7 (117-306)||(46625275-46625464)
chr7 (111-222)||(2464763-2464874)
chr7 (157-255)||(11383440-11383538)
chr7 (111-281)||(16090425-16090595)
chr7 (111-283)||(29181654-29181826)
chr7 (127-250)||(14320192-14320316)
chr7 (151-255)||(21231571-21231674)
chr7 (115-162)||(13678982-13679030)
[»] chr5 (16 HSPs)
chr5 (92-287)||(23527904-23528099)
chr5 (115-255)||(18408491-18408631)
chr5 (94-222)||(28889925-28890053)
chr5 (94-222)||(28896629-28896757)
chr5 (94-222)||(28909877-28910005)
chr5 (94-222)||(28931569-28931697)
chr5 (94-222)||(28946272-28946400)
chr5 (111-222)||(19236299-19236410)
chr5 (111-220)||(22467181-22467290)
chr5 (111-222)||(22460555-22460666)
chr5 (94-222)||(28933070-28933200)
chr5 (92-162)||(20819618-20819689)
chr5 (92-162)||(20826718-20826789)
chr5 (127-263)||(34829441-34829578)
chr5 (151-199)||(22439322-22439370)
chr5 (209-255)||(22439360-22439406)
[»] chr1 (9 HSPs)
chr1 (94-287)||(41111214-41111407)
chr1 (152-253)||(18712117-18712218)
chr1 (111-222)||(20858305-20858416)
chr1 (111-222)||(21705674-21705785)
chr1 (111-222)||(21710217-21710328)
chr1 (111-222)||(20851678-20851789)
chr1 (117-312)||(22030298-22030494)
chr1 (209-312)||(11157451-11157554)
chr1 (126-263)||(19961547-19961684)
[»] scaffold1773 (1 HSPs)
scaffold1773 (95-288)||(452-644)
[»] chr4 (11 HSPs)
chr4 (92-288)||(8046420-8046616)
chr4 (92-239)||(53483023-53483171)
chr4 (111-263)||(11847462-11847614)
chr4 (89-255)||(15407454-15407608)
chr4 (111-281)||(16147376-16147546)
chr4 (151-242)||(14486049-14486140)
chr4 (117-263)||(13887144-13887289)
chr4 (117-263)||(13888001-13888146)
chr4 (117-249)||(15244587-15244719)
chr4 (121-244)||(15307497-15307620)
chr4 (122-312)||(8834195-8834385)
[»] scaffold0247 (1 HSPs)
scaffold0247 (92-265)||(10667-10829)
[»] scaffold0026 (2 HSPs)
scaffold0026 (92-202)||(12437-12547)
scaffold0026 (228-311)||(12553-12636)
[»] chr8 (6 HSPs)
chr8 (95-288)||(23865885-23866078)
chr8 (92-202)||(17053949-17054060)
chr8 (89-255)||(14057148-14057302)
chr8 (89-255)||(25111354-25111508)
chr8 (111-222)||(24321216-24321327)
chr8 (151-312)||(18613531-18613691)
[»] scaffold0317 (2 HSPs)
scaffold0317 (89-312)||(665-888)
scaffold0317 (115-162)||(875-923)
[»] scaffold0222 (1 HSPs)
scaffold0222 (89-306)||(16086-16303)
[»] scaffold0117 (1 HSPs)
scaffold0117 (95-287)||(9167-9358)
[»] scaffold0634 (2 HSPs)
scaffold0634 (158-312)||(2982-3136)
scaffold0634 (127-163)||(3181-3217)
[»] scaffold0461 (2 HSPs)
scaffold0461 (89-285)||(581-766)
scaffold0461 (188-285)||(7605-7702)
[»] scaffold0476 (1 HSPs)
scaffold0476 (128-285)||(3854-4011)
[»] scaffold0154 (1 HSPs)
scaffold0154 (151-312)||(30209-30370)
[»] scaffold0232 (1 HSPs)
scaffold0232 (117-312)||(18961-19156)
[»] scaffold0138 (1 HSPs)
scaffold0138 (117-312)||(1127-1322)
[»] scaffold0456 (2 HSPs)
scaffold0456 (92-312)||(305-504)
scaffold0456 (92-312)||(7450-7649)
[»] scaffold0124 (1 HSPs)
scaffold0124 (89-254)||(34861-35015)
[»] scaffold0029 (3 HSPs)
scaffold0029 (95-202)||(111271-111378)
scaffold0029 (111-222)||(91747-91858)
scaffold0029 (111-222)||(97473-97584)
[»] scaffold0310 (1 HSPs)
scaffold0310 (154-255)||(6876-6976)
[»] scaffold0924 (1 HSPs)
scaffold0924 (95-194)||(1343-1442)
[»] scaffold0077 (1 HSPs)
scaffold0077 (151-285)||(4195-4329)
[»] scaffold0028 (2 HSPs)
scaffold0028 (151-312)||(65414-65575)
scaffold0028 (117-244)||(1445-1572)
[»] scaffold0090 (1 HSPs)
scaffold0090 (127-291)||(17497-17661)
[»] scaffold0053 (2 HSPs)
scaffold0053 (116-312)||(81764-81960)
scaffold0053 (111-281)||(80036-80206)
[»] scaffold0235 (2 HSPs)
scaffold0235 (102-255)||(23192-23334)
scaffold0235 (102-285)||(15475-15647)
[»] scaffold0004 (2 HSPs)
scaffold0004 (89-304)||(116183-116388)
scaffold0004 (151-285)||(129221-129355)
[»] scaffold0094 (1 HSPs)
scaffold0094 (117-312)||(51554-51749)
[»] scaffold0085 (1 HSPs)
scaffold0085 (111-239)||(4217-4345)
[»] scaffold0139 (1 HSPs)
scaffold0139 (88-312)||(15521-15733)
[»] scaffold0020 (1 HSPs)
scaffold0020 (151-304)||(102503-102656)
[»] scaffold0031 (2 HSPs)
scaffold0031 (117-312)||(121210-121406)
scaffold0031 (117-312)||(132087-132283)
[»] scaffold0023 (1 HSPs)
scaffold0023 (111-204)||(134867-134960)
[»] scaffold1061 (1 HSPs)
scaffold1061 (205-306)||(1716-1817)
[»] scaffold0107 (1 HSPs)
scaffold0107 (158-255)||(41171-41267)
[»] scaffold0483 (1 HSPs)
scaffold0483 (126-257)||(11569-11700)
[»] scaffold0006 (1 HSPs)
scaffold0006 (95-145)||(49595-49645)
[»] scaffold0001 (2 HSPs)
scaffold0001 (127-263)||(493588-493725)
scaffold0001 (179-241)||(525142-525204)
[»] scaffold0261 (2 HSPs)
scaffold0261 (188-263)||(24192-24267)
scaffold0261 (127-163)||(24070-24106)


Alignment Details
Target: scaffold0025 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 95 - 241
Target Start/End: Original strand, 14977 - 15123
Alignment:
Q  95 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  14977 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcgaaccgtaagcgagctgaacccagacttactgtaagccggtcgct 15076  T
Q  195 caagcgaactagccgtcgcttaagcgaagtggaccttagtcagccac 241  Q
     ||||||||||||||||||||||||||||||||||||||||||||||    
T  15077 taagcgaactagccgtcgcttaagcgaagtggaccttagtcagccac 15123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 1e-65; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 95 - 241
Target Start/End: Complemental strand, 24192418 - 24192272
Alignment:
Q  95 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||| |||||||||||||||||||||    
T  24192418 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcgaaccgtaagtgagttgaacccagacttactgtaagccggtcgct 24192319  T
Q  195 caagcgaactagccgtcgcttaagcgaagtggaccttagtcagccac 241  Q
     ||||||||||||||||||||||||||||||||||||||||||||||    
T  24192318 taagcgaactagccgtcgcttaagcgaagtggaccttagtcagccac 24192272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 95 - 273
Target Start/End: Original strand, 41455687 - 41455868
Alignment:
Q  95 gtgagcgaaaaacca--ttttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggtc 191  Q
    |||||||||||||||  |||||||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| ||| |||||||||| ||||    
T  41455687 gtgagcgaaaaaccaatttttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagaacctactgtaagctggtc 41455786  T
Q  192 gctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggac 273  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||  |||||||||| |||||| ||||| |||||||||    
T  41455787 gcttaagcgaactagccgtcgcttaagcgaagtgaaccttagtcagcctttttctgaactgttgcttagtgca-tgaggggac 41455868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 151 - 285
Target Start/End: Original strand, 16802041 - 16802175
Alignment:
Q  151 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 250  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||||| ||||||||| ||||||||| |||||    
T  16802041 aaccgtaagcgagcagaacccagacttactgtaagccggtcgcttaagcgagctagccgtcgtttaagcgaagttgaccttagttagccactttttgaac 16802140  T
Q  251 tttgctttgtgcattgagggga-ccttttgagcatt 285  Q
    ||||| |  |||||| |||||| |||||||||||||    
T  16802141 tttgcctcatgcatt-aggggacccttttgagcatt 16802175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 55499700 - 55499804
Alignment:
Q  151 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 250  Q
    |||||||||||||| ||||| | ||||||||||||||||||||| ||||||||||| ||||||||||||||||| || |||||||||||||||| |||||    
T  55499700 aaccgtaagcgagcagaacctagacttactgtaagccggtcgcttaagcgaactagacgtcgcttaagcgaagttgatcttagtcagccactttttgaac 55499799  T
Q  251 tttgc 255  Q
     ||||    
T  55499800 gttgc 55499804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 153 - 312
Target Start/End: Original strand, 13324376 - 13324535
Alignment:
Q  153 ccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactt 252  Q
    |||| |||||||  ||||||||||| ||| ||||| |||||| |||||| | |||| ||||||||||||  ||  |||||||||||||||||||||| ||    
T  13324376 ccgtcagcgagcaaaacccaaactttctgcaagccagtcgcttaagcgagccagccttcgcttaagcgagctgagccttagtcagccactttctgaattt 13324475  T
Q  253 tgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataa 312  Q
    ||||| ||||||| |||||| |||||||||||||| || || | ||||||| |||||||||    
T  13324476 tgcttcgtgcatt-aggggacccttttgagcattcaaagatgtttctttcagcttatataa 13324535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 89 - 244
Target Start/End: Complemental strand, 18914646 - 18914491
Alignment:
Q  89 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 188  Q
    ||||| || ||||||||| || ||  |||||| |||||||||||| ||| ||||||  ||| |||| | ||||||| |||||| ||||  || |||||||    
T  18914646 gaacccgtaagcgaaaaatcaattccattctgccagaagttcgcttaagtgaaccgcaagcgaacctttagcgagcggaaccccaactctctataagccg 18914547  T
Q  189 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccacttt 244  Q
    |||||| ||||||||  ||| ||||||||||||||  |||||||||||||||||||    
T  18914546 gtcgcttaagcgaacctgccatcgcttaagcgaagatgaccttagtcagccacttt 18914491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 281
Target Start/End: Complemental strand, 14865338 - 14865184
Alignment:
Q  128 ttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccg-tcgcttaagcgaagtgg 226  Q
    |||||| |||||| |||||||| | |||||||||| ||||||||| || |||| ||||| ||||||| |||||||||||||| ||||||||||||| ||     
T  14865338 ttcgcttaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactctaagctggtcgcttaagcgaactagccgttcgcttaagcgaactga 14865239  T
Q  227 accttagtcagccactttctgaactttgctttgtgcattgaggggaccttttgag 281  Q
       ||||||||||  ||||||||| |||||| ||||| | ||||  |||||||||    
T  14865238 gtgttagtcagcctttttctgaaccttgcttcgtgcactaagggatccttttgag 14865184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 17241085 - 17241201
Alignment:
Q  89 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 188  Q
    ||||| || ||||||||| || ||| ||||||||||||||||||||||||||||||  ||| |||||| ||||||| |||||| ||||  || |||| ||    
T  17241085 gaacccgtaagcgaaaaatcaatttcattctgtcagaagttcgctcaagcgaaccgcaagcgaaccgtcagcgagcggaaccccaactctctataagtcg 17241184  T
Q  189 gtcgctcaagcgaacta 205  Q
    |||||| ||||||||||    
T  17241185 gtcgcttaagcgaacta 17241201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 312
Target Start/End: Original strand, 13302844 - 13302947
Alignment:
Q  209 gtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaactta 307  Q
    |||||||||||||  ||  |||||||||||||||||||||| ||||||| ||||||| |||||| |||||||||||||| || || | ||||||| ||||    
T  13302844 gtcgcttaagcgagctgagccttagtcagccactttctgaattttgcttcgtgcatt-aggggacccttttgagcattcaaagatgtttctttcagctta 13302942  T
Q  308 tataa 312  Q
    |||||    
T  13302943 tataa 13302947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 312
Target Start/End: Original strand, 13313520 - 13313623
Alignment:
Q  209 gtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaactta 307  Q
    |||||||||||||  ||  |||||||||||||||||||||| ||||||| ||||||| |||||| |||||||||||||  || || | ||||||| ||||    
T  13313520 gtcgcttaagcgagctgagccttagtcagccactttctgaattttgcttcgtgcatt-aggggacccttttgagcatttaaagatgtttctttcagctta 13313618  T
Q  308 tataa 312  Q
    |||||    
T  13313619 tataa 13313623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 10390034 - 10390104
Alignment:
Q  93 ctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaac-cgtgagcaaaccgtaagcga 162  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||  |||||| |||||| |||||    
T  10390034 ctgtgagcgaaaaaccattttgattctgtccaaatttcgctcaagcgaacttgtgagcgaaccgtgagcga 10390104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 10415123 - 10415193
Alignment:
Q  93 ctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaac-cgtgagcaaaccgtaagcga 162  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||  |||||| |||||| |||||    
T  10415123 ctgtgagcgaaaaaccattttgattctgtccaaatttcgctcaagcgaacttgtgagcgaaccgtgagcga 10415193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 10421793 - 10421863
Alignment:
Q  93 ctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaac-cgtgagcaaaccgtaagcga 162  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||  |||||| |||||| |||||    
T  10421793 ctgtgagcgaaaaaccattttgattctgtccaaatttcgctcaagcgaacttgtgagcgaaccgtgagcga 10421863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 17243260 - 17243343
Alignment:
Q  201 aactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcatt 285  Q
    |||||||| ||||||||||||||  ||||||||||||||||||| |||||||||| | ||||| | |||||| |||||||||||||    
T  17243260 aactagccatcgcttaagcgaagatgaccttagtcagccacttt-tgaactttgcctcgtgcact-aggggatccttttgagcatt 17243343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 8e-61; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 95 - 294
Target Start/End: Original strand, 29614738 - 29614934
Alignment:
Q  95 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||| ||||||||    
T  29614738 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaacccgtaagcgagctgaacccagacctactgtaagtcggtcgct 29614837  T
Q  195 caagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac-tttgctttgtgcattgaggggaccttttgagcattctaaaata 293  Q
     ||||||||||||||||||||||||||||||  ||||||||||||   |||||||| |||| || ||||| |||||| || | |||||||||||| ||||    
T  29614838 taagcgaactagccgtcgcttaagcgaagtgagccttagtcagcc---ttctgaacttttgtttcgtgca-tgagggaacttcttgagcattctataata 29614933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 92 - 287
Target Start/End: Complemental strand, 12167832 - 12167637
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 190  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| ||| |||||||||| |||    
T  12167832 cctgtgagcgaaaaaccattttcattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagaacctactgtaagctggt 12167733  T
Q  191 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattct 287  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||||  |||||||||| |||||| ||||| ||||||||| | |||||| ||||    
T  12167732 cgcttaagcgaactagccgtcgcttaagcgaagtgaaccttaatcagcc-ttttctgaactgttgcttagtgca-tgaggggacttcttgagcgttct 12167637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 92 - 287
Target Start/End: Complemental strand, 19286741 - 19286546
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 190  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| ||| |||||||||| |||    
T  19286741 cctgtgagcgaaaaaccattttcattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagaacctactgtaagctggt 19286642  T
Q  191 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattct 287  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||||  |||||||||| |||||| ||||| ||||||||| | |||||| ||||    
T  19286641 cgcttaagcgaactagccgtcgcttaagcgaagtgaaccttaatcagcc-ttttctgaactgttgcttagtgca-tgaggggacttcttgagcgttct 19286546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 94 - 287
Target Start/End: Complemental strand, 19877923 - 19877730
Alignment:
Q  94 tgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggtcg 192  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| ||| |||||||||| |||||    
T  19877923 tgtgagcgaaaaaccattttcattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagaacctactgtaagctggtcg 19877824  T
Q  193 ctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattct 287  Q
    || |||||||||||||||||||||||||||||| |||||| ||||||  |||||||||| |||||| ||||| ||||||||| | |||||| ||||    
T  19877823 cttaagcgaactagccgtcgcttaagcgaagtgaaccttaatcagcc-ttttctgaactgttgcttagtgca-tgaggggacttcttgagcgttct 19877730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 92 - 287
Target Start/End: Complemental strand, 19883701 - 19883506
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 190  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| ||| |||||||||| |||    
T  19883701 cctgtgagcgaaaaaccattttcattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagaacctactgtaagctggt 19883602  T
Q  191 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattct 287  Q
    |||| |||||||||||||||||||||||||||||| |||||| | ||||  |||||||||| |||||| ||||| ||||||||| | |||||| ||||    
T  19883601 cgcttaagcgaactagccgtcgcttaagcgaagtgaaccttaattagcc-ttttctgaactgttgcttagtgca-tgaggggacttcttgagcgttct 19883506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 92 - 239
Target Start/End: Original strand, 34640575 - 34640723
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 190  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| |||| |||| | | |||||||||| |||    
T  34640575 cctgtgagcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgagcccagagcctactgtaagctggt 34640674  T
Q  191 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagcc 239  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||    
T  34640675 cgcttaagcgaactagccgtcgcttaagcgaagtgaaccttagtcagcc 34640723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 92 - 239
Target Start/End: Original strand, 34647249 - 34647397
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 190  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| |||| |||| | | |||||||||| |||    
T  34647249 cctgtgagcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgagcccagagcctactgtaagctggt 34647348  T
Q  191 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagcc 239  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||    
T  34647349 cgcttaagcgaactagccgtcgcttaagcgaagtgaaccttagtcagcc 34647397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 92 - 287
Target Start/End: Original strand, 19786455 - 19786650
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 190  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| | ||||||||||  |||||||| ||| |||||||||| |||    
T  19786455 cctgtgagcgaaaaaccattttcattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaagtgaacccagaacctactgtaagctggt 19786554  T
Q  191 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattct 287  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||||  |||||||||| ||||||  |||| ||||||||| | |||||| ||||    
T  19786555 cgcttaagcgaactagccgtcgcttaagcgaagtgaaccttaatcagcc-ttttctgaactgttgcttaatgca-tgaggggacttcttgagcgttct 19786650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 92 - 252
Target Start/End: Original strand, 25470290 - 25470451
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 190  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||||||||| | |||||||||| |||| |||| ||| |||||||||  |||    
T  25470290 cctgtgagcgaaaaaccattttgattctgtccaaaattcgctcaagcgaaccgtgagcgacccgtaagcgaactgagcccagaacctactgtaagttggt 25470389  T
Q  191 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactt 252  Q
    |||| ||||||||||| |||||||||||||||||| |||||||||||||  |||||||||||    
T  25470390 cgcttaagcgaactagacgtcgcttaagcgaagtgaaccttagtcagcctttttctgaactt 25470451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 94 - 222
Target Start/End: Original strand, 21365067 - 21365195
Alignment:
Q  94 tgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgc 193  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| || |||||||||  ||||||    
T  21365067 tgtgagcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgc 21365166  T
Q  194 tcaagcgaactagccgtcgcttaagcgaa 222  Q
    | |||||| ||||||||||||||||||||    
T  21365167 ttaagcgagctagccgtcgcttaagcgaa 21365195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 94 - 222
Target Start/End: Original strand, 23969049 - 23969177
Alignment:
Q  94 tgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgc 193  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| || |||||||||  ||||||    
T  23969049 tgtgagcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgc 23969148  T
Q  194 tcaagcgaactagccgtcgcttaagcgaa 222  Q
    | |||||| ||||||||||||||||||||    
T  23969149 ttaagcgagctagccgtcgcttaagcgaa 23969177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 151 - 312
Target Start/End: Complemental strand, 18799920 - 18799759
Alignment:
Q  151 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 250  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  18799920 aaccgtaagcgagcggaacccagacttactgtaagccggtcgcttaagcgaactagccgtcgcttaagcgaagtcaaccttagtcagccactttttgaac 18799821  T
Q  251 tttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataa 312  Q
    ||||| |  |||||| |||||| |||||| ||||||| || || |  |||||||||| |||||    
T  18799820 tttgcctcatgcatt-aggggaccctttttagcattcaaacatgttcctttcaacttgtataa 18799759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 151 - 285
Target Start/End: Original strand, 21565765 - 21565899
Alignment:
Q  151 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 250  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||||||||||||||| |||||    
T  21565765 aaccgtaagcgagcagaacccagacttactgtaagccggtcgcttaagcgaactggacgtcgcttaagcgaagttgaccttagtcagccactttttgaac 21565864  T
Q  251 tttgctttgtgcattgagggga-ccttttgagcatt 285  Q
     |||| | ||||||| ||| || |||||||||||||    
T  21565865 gttgcctcgtgcatt-aggagacccttttgagcatt 21565899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 151 - 312
Target Start/End: Complemental strand, 25396654 - 25396493
Alignment:
Q  151 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 250  Q
    |||||| ||||||| |||||| ||||  ||||||| |||||||| |||||| | |||||||||||||||||||| |  |||||||| ||||||| ||||     
T  25396654 aaccgttagcgagcggaaccccaactctctgtaagtcggtcgcttaagcgagccagccgtcgcttaagcgaagtaggtcttagtcaaccactttttgaat 25396555  T
Q  251 tttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataa 312  Q
    | ||||| ||||| | |||| | |||||||||||||||||||| | ||||||||||| |||||    
T  25396554 tatgcttagtgcact-agggaatccttttgagcattctaaaatgtttctttcaacttgtataa 25396493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 19471891 - 19472080
Alignment:
Q  122 cagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcga 221  Q
    |||||||||||| ||||||||||  ||| | |||| ||||||| |||||| ||||| |||| ||||||||||| |||||| | |||| ||||||||||||    
T  19471891 cagaagttcgcttaagcgaaccgcaagcgagccgttagcgagcggaaccccaactttctgtgagccggtcgcttaagcgagccagccatcgcttaagcga 19471990  T
Q  222 agtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataa 312  Q
    ||  |  ||| |||||||||||| |||| ||||||| ||||| | |||||| ||||||||||||| | |||| | || |||||||| |||||    
T  19471991 agaaggtctt-gtcagccactttttgaattttgcttcgtgcact-aggggatccttttgagcattttgaaatgtttccttcaacttgtataa 19472080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 111 - 222
Target Start/End: Original strand, 20008493 - 20008604
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 210  Q
    |||||||||| ||  | |||||| |||||| |||||||| | |||||||||| ||||||||| || |||||||||| ||||||| |||||||||||||||    
T  20008493 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagctggtcgcttaagcgaactagccgt 20008592  T
Q  211 cgcttaagcgaa 222  Q
     |||||||||||    
T  20008593 tgcttaagcgaa 20008604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 9186903 - 9186827
Alignment:
Q  209 gtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcatt 285  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||||| ||||| | |||||| |||||||||||||    
T  9186903 gtcgcttaagcgaagatgaccttagtcagccactttttgaactttgcttcgtgcact-aggggatccttttgagcatt 9186827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 263
Target Start/End: Original strand, 19300317 - 19300434
Alignment:
Q  146 gagcaaaccgtaagcgagct-gaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccacttt 244  Q
    |||| |||||| |||||||  ||| |||||||| ||||| || ||||||| |||||| ||| || ||||||||||||  ||  |||||||||||| || |    
T  19300317 gagcgaaccgtgagcgagcgagaatccaaacttcctgta-gctggtcgcttaagcgagctacccttcgcttaagcgagatgagccttagtcagcctctat 19300415  T
Q  245 ctgaactttgctttgtgca 263  Q
    ||||||||||||| |||||    
T  19300416 ctgaactttgcttcgtgca 19300434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 24513456 - 24513553
Alignment:
Q  209 gtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaactt 306  Q
    |||||||||||||||  ||||||||||||||||||| ||||| |||| | ||||| | |||||| ||||||||||||| | |||| |  ||||||||||    
T  24513456 gtcgcttaagcgaagatgaccttagtcagccactttttgaaccttgcctcgtgcact-aggggatccttttgagcatttttaaatgttcctttcaactt 24513553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 24513370 - 24513423
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgt 145  Q
    ||||| ||||||||| |||||| |||||  ||||||||||||||||||||||||    
T  24513370 cctgtaagcgaaaaatcattttcattcttccagaagttcgctcaagcgaaccgt 24513423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 24513425 - 24513469
Alignment:
Q  158 agcgagctgaacccaaacttactgtaagccggtcgctcaagcgaa 202  Q
    ||||||| |||||||||||| |||| ||||||||||| |||||||    
T  24513425 agcgagcggaacccaaactttctgtgagccggtcgcttaagcgaa 24513469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 5e-59; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 95 - 305
Target Start/End: Complemental strand, 26583313 - 26583103
Alignment:
Q  95 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| || ||||||||||||||||||    
T  26583313 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcgacccgtaagcgagctgaacccagacctactgtaagccggtcgct 26583214  T
Q  195 caagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac-tttgctttgtgcattgaggggaccttttgagcattctaaaata 293  Q
     |||||||||||||||||||||||||||||    |||||||||||   |||||||| |||| || |||||  |||||||| | |||||||||||| ||||    
T  26583213 taagcgaactagccgtcgcttaagcgaagtaagtcttagtcagccttcttctgaacttttgtttcgtgca-ggaggggacttcttgagcattctataata 26583115  T
Q  294 tctctttcaact 305  Q
    | ||||| ||||    
T  26583114 tttcttttaact 26583103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 92 - 239
Target Start/End: Original strand, 5706610 - 5706758
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 190  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| |||| |||| | | |||||||||| |||    
T  5706610 cctgtgagcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgagcccagagcctactgtaagctggt 5706709  T
Q  191 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagcc 239  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||    
T  5706710 cgcttaagcgaactagccgtcgcttaagcgaagtgaaccttagtcagcc 5706758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 89 - 285
Target Start/End: Complemental strand, 23878481 - 23878286
Alignment:
Q  89 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 188  Q
    ||||||||||||||  |||| ||||||||||| ||  | ||||||||||||||| |  ||| |||||||||||||| ||||||| |||||||||||||||    
T  23878481 gaacctgtgagcgaggaacctttttgattctgccaagaattcgctcaagcgaactgcaagcgaaccgtaagcgagcagaacccagacttactgtaagccg 23878382  T
Q  189 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcatt 285  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||||||||||||| ||||| |||| | ||||| | |||||| |||||||||||||    
T  23878381 gtcgcttaagcgaactagccgtcgcttaagcgaagatgaccttagtcagccacttt-tgaaccttgcctcgtgcact-aggggatccttttgagcatt 23878286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 89 - 312
Target Start/End: Complemental strand, 23063216 - 23062993
Alignment:
Q  89 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 188  Q
    ||||| || ||||||||| |||||  ||||||||||||||||||| ||||||||||  ||| |  ||| ||||||   ||||| ||||  ||||||||||    
T  23063216 gaacccgtaagcgaaaaatcatttgcattctgtcagaagttcgcttaagcgaaccgcaagcgaggcgttagcgagtgaaaccccaactctctgtaagccg 23063117  T
Q  189 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattct 287  Q
    |||||| |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||| | ||||||| |||||| |||||||||||||      
T  23063116 gtcgcttaagcgaaccagccgtcgcttaagcgaagttgaccttagtcagccactttttgaactttgcctcgtgcatt-aggggatccttttgagcattta 23063018  T
Q  288 aaaatatctctttcaacttatataa 312  Q
    ||||| | ||||||||||| |||||    
T  23063017 aaaatgtttctttcaacttgtataa 23062993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 151 - 265
Target Start/End: Original strand, 23089608 - 23089722
Alignment:
Q  151 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 250  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||||||||||||||| |||||    
T  23089608 aaccgtaagcgagcagaacccagacttactgtaagccggtcgcttaagcgaactggacgtcgcttaagcgaagttgaccttagtcagccactttttgaac 23089707  T
Q  251 tttgctttgtgcatt 265  Q
     |||| | |||||||    
T  23089708 gttgcctcgtgcatt 23089722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 151 - 255
Target Start/End: Complemental strand, 21907848 - 21907744
Alignment:
Q  151 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 250  Q
    |||||| ||||||| |||||| ||||| |||||||||||||||| ||||||||||||| ||||||||||||||  ||||||||||||||||||| |||||    
T  21907848 aaccgttagcgagcggaaccccaactttctgtaagccggtcgcttaagcgaactagccatcgcttaagcgaagatgaccttagtcagccactttttgaac 21907749  T
Q  251 tttgc 255  Q
    |||||    
T  21907748 tttgc 21907744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 151 - 265
Target Start/End: Original strand, 23102036 - 23102150
Alignment:
Q  151 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 250  Q
    |||||||||||||| ||||||| ||||||||||||||| || || ||||||||| | ||||||||||||||||| ||||||||||||||||||| |||||    
T  23102036 aaccgtaagcgagcagaacccagacttactgtaagccgatcacttaagcgaactggacgtcgcttaagcgaagttgaccttagtcagccactttttgaac 23102135  T
Q  251 tttgctttgtgcatt 265  Q
     |||| | |||||||    
T  23102136 gttgcctcgtgcatt 23102150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 142 - 281
Target Start/End: Complemental strand, 29281475 - 29281336
Alignment:
Q  142 ccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccac 241  Q
    |||||||| | |||||||||| ||||||||| || |||||||||| ||||||| ||||||||||||||||||||||||||| ||    ||||||||||      
T  29281475 ccgtgagcgacccgtaagcgaactgaacccagacctactgtaagctggtcgcttaagcgaactagccgtcgcttaagcgaactgagtgttagtcagcctt 29281376  T
Q  242 tttctgaactttgctttgtgcattgaggggaccttttgag 281  Q
    ||||||||| |||||| ||||| | ||||  |||||||||    
T  29281375 tttctgaaccttgcttcgtgcactaagggatccttttgag 29281336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 10086 - 9978
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 210  Q
    |||||||||| ||  | |||||| |||||| |||||||| | |||||||||| ||||||||| || |||||||||| ||||||| |||||||||||||||    
T  10086 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagctggtcgcttaagcgaactagccgt 9987  T
Q  211 cgcttaagc 219  Q
    |||||||||    
T  9986 cgcttaagc 9978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 166 - 312
Target Start/End: Complemental strand, 24661032 - 24660886
Alignment:
Q  166 gaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcatt 265  Q
    |||||| ||||| |||| ||||||||||| |||||| | ||||||||||||||| |||  |  |||||||||||||||| |||| ||| ||| ||||| |    
T  24661032 gaaccccaactttctgtgagccggtcgcttaagcgagccagccgtcgcttaagcaaagaaggtcttagtcagccactttttgaattttacttcgtgcact 24660933  T
Q  266 gagggga-ccttttgagcattctaaaatatctctttcaacttatataa 312  Q
     |||||| ||||||||||||| |||||| | ||||||||||| |||||    
T  24660932 -aggggatccttttgagcattttaaaatgtttctttcaacttgtataa 24660886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 111 - 222
Target Start/End: Original strand, 25181446 - 25181557
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 210  Q
    |||||||||| ||  | |||||| |||||| |||||||| | ||||||| || ||||||||| || |||||||||| ||||||| |||| ||||||||||    
T  25181446 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccgtaagtgaactgaacccagacctactgtaagctggtcgcttaagcaaactagccgt 25181545  T
Q  211 cgcttaagcgaa 222  Q
    ||||||||||||    
T  25181546 cgcttaagcgaa 25181557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 263
Target Start/End: Complemental strand, 26884701 - 26884564
Alignment:
Q  127 gttcgctcaagcgaaccgtgagcaaaccgtaagcgagct-gaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtg 225  Q
    |||||||||||||||| |||||| |||||| |||||||  |||||  ||| |  |||  || ||||||| |||||| ||| || ||||||||||||| ||    
T  26884701 gttcgctcaagcgaactgtgagctaaccgtgagcgagcgagaacctcaaccttttgtgtgctggtcgcttaagcgagctacccttcgcttaagcgaactg 26884602  T
Q  226 gaccttagtcagccactttctgaactttgctttgtgca 263  Q
      |||||||||||| |||||||||| |||||| |||||    
T  26884601 agccttagtcagcctctttctgaaccttgcttcgtgca 26884564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 312
Target Start/End: Complemental strand, 23264524 - 23264421
Alignment:
Q  209 gtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaactta 307  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||| | ||||| | |||||| ||||||||||||| | |||| |  ||||||||||     
T  23264524 gtcgcttaagcgaagatgaccttagtcagccactttttgaactttgcctcgtgcact-aggggatccttttgagcatttttaaatgttcctttcaacttg 23264426  T
Q  308 tataa 312  Q
    |||||    
T  23264425 tataa 23264421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 23264613 - 23264557
Alignment:
Q  89 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgt 145  Q
    ||||| || ||||||||| |||||| ||| |||||||||||||||||||||||||||    
T  23264613 gaacccgtaagcgaaaaatcattttcattatgtcagaagttcgctcaagcgaaccgt 23264557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 263
Target Start/End: Original strand, 27208318 - 27208408
Alignment:
Q  173 aacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgca 263  Q
    ||||| |||| ||| ||||||| |||||| ||| || ||||||||||||| ||  ||||||||||||  ||||||||| ||| || |||||    
T  27208318 aactttctgtgagctggtcgcttaagcgagctacccttcgcttaagcgaactgagccttagtcagcctttttctgaaccttgtttcgtgca 27208408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 263
Target Start/End: Original strand, 27210653 - 27210743
Alignment:
Q  173 aacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgca 263  Q
    ||||| |||| ||| ||||||| |||||| ||| || ||||||||||||| ||  ||||||||||||  ||||||||| ||| || |||||    
T  27210653 aactttctgtgagctggtcgcttaagcgagctacccttcgcttaagcgaactgagccttagtcagcctttttctgaaccttgtttcgtgca 27210743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 3e-51; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 95 - 305
Target Start/End: Complemental strand, 13743174 - 13742966
Alignment:
Q  95 gtgagcgaaaaaccatttt-gattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgc 193  Q
    ||||||||||||| ||||| |||||||||  ||||||||||||||||||||||||| | |||||||||||||||||||| || |||| ||||||||||||    
T  13743174 gtgagcgaaaaacaatttttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgagctgaacccagacctactataagccggtcgc 13743075  T
Q  194 tcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac-tttgctttgtgcattgaggggaccttttgagcattctaaaat 292  Q
    | ||||||||||||||||||||||||||||||  ||||||||||||   |||||||| |||| || ||||| ||||||||| | |||||||||||| |||    
T  13743074 ttaagcgaactagccgtcgcttaagcgaagtgagccttagtcagcc---ttctgaacttttgtttcgtgca-tgaggggacttcttgagcattctataat 13742979  T
Q  293 atctctttcaact 305  Q
    || ||||| ||||    
T  13742978 atttcttttaact 13742966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 92 - 287
Target Start/End: Complemental strand, 13006901 - 13006706
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 190  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| ||| |||||||||| |||    
T  13006901 cctgtgagcgaaaaaccattttcattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagaacctactgtaagctggt 13006802  T
Q  191 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattct 287  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||||  |||||||||| |||||| ||||| ||||||||| | |||||| ||||    
T  13006801 cgcttaagcgaactagccgtcgcttaagcgaagtgaaccttaatcagcc-ttttctgaactgttgcttagtgca-tgaggggacttcttgagcgttct 13006706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 95 - 288
Target Start/End: Original strand, 13123506 - 13123698
Alignment:
Q  95 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 194  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| || |||||||||  |||||||    
T  13123506 gtgagcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgct 13123605  T
Q  195 caagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattcta 288  Q
     |||||| |||||||||||||||||||||||   |||||||||||  |||||||||| || ||| ||||| ||||||||| | ||||||||||||    
T  13123606 taagcgagctagccgtcgcttaagcgaagtgagtcttagtcagcc-ttttctgaactattacttagtgca-tgaggggacttcttgagcattcta 13123698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 92 - 238
Target Start/End: Original strand, 12591230 - 12591377
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 190  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||||||||| | |||||||||| |||| |||| | | |||||||||| |||    
T  12591230 cctgtgagcgaaaaaccattttgattctgtccaaatttcgctcaagcgaaccgtgagcgacccgtaagcgaactgatcccagatcctactgtaagctggt 12591329  T
Q  191 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagc 238  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||    
T  12591330 cgcttaagcgaactagccgtcgcttaagcgaagtgaaccttagtcagc 12591377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 89 - 312
Target Start/End: Complemental strand, 13678995 - 13678772
Alignment:
Q  89 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 188  Q
    ||||| || ||||||||| |||||  ||||||||||||||||||| ||||||||||  ||| || ||| ||||||   ||||| ||||  ||||||||||    
T  13678995 gaacccgtaagcgaaaaatcatttccattctgtcagaagttcgcttaagcgaaccgcaagcgaaacgttagcgagggaaaccccaactctctgtaagccg 13678896  T
Q  189 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattct 287  Q
    |||||| |||||||| |||||||||||||||||||  ||||||||||||||||||| |||||||||| | ||||||| |||||| |||||||||||||      
T  13678895 gtcgcttaagcgaaccagccgtcgcttaagcgaagatgaccttagtcagccactttttgaactttgcctcgtgcatt-aggggatccttttgagcattaa 13678797  T
Q  288 aaaatatctctttcaacttatataa 312  Q
    ||||| | |||||||| || |||||    
T  13678796 aaaatgtttctttcaatttgtataa 13678772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 89 - 285
Target Start/End: Complemental strand, 16676845 - 16676660
Alignment:
Q  89 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 188  Q
    |||||||| ||||||||||||||||||||||||||  | |||||||||||||||| |           |||||||| ||||||| |||||||||||||||    
T  16676845 gaacctgtaagcgaaaaaccattttgattctgtcaagaattcgctcaagcgaaccat-----------aagcgagcggaacccagacttactgtaagccg 16676757  T
Q  189 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgaggggacc-ttttgagcatt 285  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| | ||||||| |||||||| |||||||||||    
T  16676756 gtcgcttaagcgaactagtcgtcgcttaagcgaagttgaccttagtcagccactttttgaacgttgcctcgtgcatt-aggggacccttttgagcatt 16676660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 89 - 285
Target Start/End: Complemental strand, 17651081 - 17650896
Alignment:
Q  89 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 188  Q
    |||||||| ||||||||||||||||||||||||||  | |||||||||||||||| |           |||||||| ||||||| |||||||||||||||    
T  17651081 gaacctgtaagcgaaaaaccattttgattctgtcaagaattcgctcaagcgaaccat-----------aagcgagcggaacccagacttactgtaagccg 17650993  T
Q  189 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgaggggacc-ttttgagcatt 285  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| | ||||||| |||||||| |||||||||||    
T  17650992 gtcgcttaagcgaactagtcgtcgcttaagcgaagttgaccttagtcagccactttttgaacgttgcctcgtgcatt-aggggacccttttgagcatt 17650896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 95 - 288
Target Start/End: Original strand, 12710435 - 12710627
Alignment:
Q  95 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 194  Q
    |||||| |||||||||||||||||||||  ||||||||||||||||||||||||| | | |||||||| ||||||||| || |||||||||  |||||||    
T  12710435 gtgagccaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacctgtaagcgaactgaacccagacctactgtaagttggtcgct 12710534  T
Q  195 caagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattcta 288  Q
     |||||| |||||||||||||||||||||||   |||||||||||  |||||||||| || ||| ||||| ||||||||| | ||||||||||||    
T  12710535 taagcgagctagccgtcgcttaagcgaagtgagtcttagtcagcc-ttttctgaactattacttagtgca-tgaggggacttcttgagcattcta 12710627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 94 - 222
Target Start/End: Original strand, 3857953 - 3858082
Alignment:
Q  94 tgtgagcgaaaaaccatttt-gattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcg 192  Q
    |||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| | |||||||||| ||||||||| || |||||||||  |||||    
T  3857953 tgtgagcgaaaaaccatttttgattctgttcaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcg 3858052  T
Q  193 ctcaagcgaactagccgtcgcttaagcgaa 222  Q
    || |||||| ||||||||||||||||||||    
T  3858053 cttaagcgagctagccgtcgcttaagcgaa 3858082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 11389922 - 11390026
Alignment:
Q  151 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 250  Q
    |||||||||||||| ||||||| ||||||||| || |||||||| |||||| |||||||||||||||||||||  ||||||||||||||||||| |||||    
T  11389922 aaccgtaagcgagcggaacccagacttactgtgagtcggtcgcttaagcgagctagccgtcgcttaagcgaagatgaccttagtcagccactttttgaac 11390021  T
Q  251 tttgc 255  Q
    |||||    
T  11390022 tttgc 11390026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 111 - 255
Target Start/End: Original strand, 20311597 - 20311740
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 210  Q
    |||||||||| ||  | |||||| ||||||||||  ||| |||||||||||||| ||||||| |||||||| |||||||||||| |||||| ||||||||    
T  20311597 tttgattctgccaagaattcgcttaagcgaaccgcaagcgaaccgtaagcgagcagaacccagacttactgcaagccggtcgcttaagcgagctagccgt 20311696  T
Q  211 cgcttaagcgaagtggaccttagtcagccactttctgaactttgc 255  Q
    |||||||||||||  ||||| ||| ||||||||| ||||||||||    
T  20311697 cgcttaagcgaagatgacctcagttagccacttt-tgaactttgc 20311740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 117 - 306
Target Start/End: Complemental strand, 46625464 - 46625275
Alignment:
Q  117 tctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctta 216  Q
    |||| |||||||||||| |||||||||| ||||||||| | ||||||| |||| | ||||  |||||||| ||||||| |||||| | ||||||||||||    
T  46625464 tctgccagaagttcgcttaagcgaaccgcgagcaaaccattagcgagcagaacgccaactctctgtaagcaggtcgcttaagcgagccagccgtcgctta 46625365  T
Q  217 agcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaactt 306  Q
    |||||||| |  |||||||||||||| | |||| |||| || ||||| | |||| | ||||||||||||| |||||| | |||||||||||    
T  46625364 agcgaagtaggtcttagtcagccactctttgaattttgtttcgtgcact-agggaatccttttgagcattttaaaatgtttctttcaactt 46625275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 2464874 - 2464763
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 210  Q
    ||||||||||||  |||||||| |||||||||||||||| | |||||||||| ||||||||| || |||||||||  ||||||| |||||| ||||||||    
T  2464874 tttgattctgtccaaagttcgcccaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgcttaagcgagctagccgt 2464775  T
Q  211 cgcttaagcgaa 222  Q
    ||||||||||||    
T  2464774 cgcttaagcgaa 2464763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 11383440 - 11383538
Alignment:
Q  157 aagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgc 255  Q
    |||||||| ||||||| ||||||||| |||| |||||| |||||| |||||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  11383440 aagcgagcggaacccagacttactgtgagcctgtcgcttaagcgagctagccgtcgcttaagcgaagatgaccttagtcagccactttttgaactttgc 11383538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 281
Target Start/End: Complemental strand, 16090595 - 16090425
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 210  Q
    |||||||||| ||  | |||||| |||| | |||||||| | |||||||||| ||||||||| || |||||||||  ||||||| |||||| ||||||||    
T  16090595 tttgattctgccaagaattcgcttaagcaagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagatggtcgcttaagcgagctagccgt 16090496  T
Q  211 cgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgaggggaccttttgag 281  Q
    |||||||||||| ||    ||||||||||  ||||||||| |||||| ||||| | ||||  |||||||||    
T  16090495 cgcttaagcgaactgagtgttagtcagcctttttctgaaccttgcttcgtgcactaagggatccttttgag 16090425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 283
Target Start/End: Original strand, 29181654 - 29181826
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 210  Q
    |||||||||| ||  |||||||| |||||| |||||||| | || ||||||| ||||||||| || |||||||||  ||||||| |||||| ||||||||    
T  29181654 tttgattctgccaagagttcgcttaagcgagccgtgagcgacccataagcgaactgaacccagacctactgtaagatggtcgcttaagcgagctagccgt 29181753  T
Q  211 cgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgaggggaccttttgagca 283  Q
    ||||||||| || ||    |||||||| |  ||||||||| |||||| ||||| | ||||  |||||||||||    
T  29181754 cgcttaagcaaactgagtgttagtcagtctttttctgaaccttgcttcgtgcactaagggatccttttgagca 29181826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 250
Target Start/End: Original strand, 14320192 - 14320316
Alignment:
Q  127 gttcgctcaagcgaaccgtgagcaaaccgtaagcgagct-gaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtg 225  Q
    ||||||||||||||||||||||| ||| || |||||||  | |||  ||||| |||| ||||||||||| |||||| ||| || ||||||||||||| ||    
T  14320192 gttcgctcaagcgaaccgtgagcgaactgtgagcgagcgaggacctcaactttctgtgagccggtcgcttaagcgagctacccttcgcttaagcgaactg 14320291  T
Q  226 gaccttagtcagccactttctgaac 250  Q
      ||||||||||||  |||||||||    
T  14320292 agccttagtcagcctttttctgaac 14320316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 255
Target Start/End: Original strand, 21231571 - 21231674
Alignment:
Q  151 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 250  Q
    |||||| ||||||| |||||| ||||| |||| ||| ||||||| |||| |||| | ||||||||||||||||  |||||| |||||||||||| |||||    
T  21231571 aaccgtcagcgagcggaaccccaactttctgtgagctggtcgcttaagcaaactggtcgtcgcttaagcgaagatgacctttgtcagccacttt-tgaac 21231669  T
Q  251 tttgc 255  Q
    |||||    
T  21231670 tttgc 21231674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 162
Target Start/End: Complemental strand, 13679030 - 13678982
Alignment:
Q  115 attctgtcagaagttcgctcaagcgaaccgtgagc-aaaccgtaagcga 162  Q
    ||||||||||| | ||||||||||||||||||||| || ||||||||||    
T  13679030 attctgtcagacgctcgctcaagcgaaccgtgagcgaacccgtaagcga 13678982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 1e-50; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 92 - 287
Target Start/End: Complemental strand, 23528099 - 23527904
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 190  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| ||| |||||||||| |||    
T  23528099 cctgtgagcgaaaaaccattttcattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagaacctactgtaagctggt 23528000  T
Q  191 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattct 287  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||||  |||||||||| |||||| ||||| ||||||||| | |||||| ||||    
T  23527999 cgcttaagcgaactagccgtcgcttaagcgaagtgaaccttaatcagcc-ttttctgaactgttgcttagtgca-tgaggggacttcttgagcgttct 23527904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 115 - 255
Target Start/End: Original strand, 18408491 - 18408631
Alignment:
Q  115 attctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgct 214  Q
    |||||| |||||||||||| ||||||  ||  ||| |||||| ||||||| |||||| ||||| |||||||||||||||| |||| ||||||||||||||    
T  18408491 attctgccagaagttcgcttaagcgagtcgcaagcgaaccgttagcgagcggaaccccaactttctgtaagccggtcgcttaagcaaactagccgtcgct 18408590  T
Q  215 taagcgaagtggaccttagtcagccactttctgaactttgc 255  Q
    ||||||||   ||||||||||||||||||| ||||||||||    
T  18408591 taagcgaaaatgaccttagtcagccactttttgaactttgc 18408631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 94 - 222
Target Start/End: Original strand, 28889925 - 28890053
Alignment:
Q  94 tgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgc 193  Q
    ||||||||||||||||||||| |||||||  |||||||| ||||||| |||||||| | |||||||||| ||||||||| || |||||||||  ||||||    
T  28889925 tgtgagcgaaaaaccattttgtttctgtccaaagttcgcccaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgc 28890024  T
Q  194 tcaagcgaactagccgtcgcttaagcgaa 222  Q
    | ||||||  |||||||||||||||||||    
T  28890025 ttaagcgagatagccgtcgcttaagcgaa 28890053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 94 - 222
Target Start/End: Original strand, 28896629 - 28896757
Alignment:
Q  94 tgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgc 193  Q
    ||||||||||||||||||||| |||||||  |||||||| ||||||| |||||||| | |||||||||| ||||||||| || |||||||||  ||||||    
T  28896629 tgtgagcgaaaaaccattttgtttctgtccaaagttcgcccaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgc 28896728  T
Q  194 tcaagcgaactagccgtcgcttaagcgaa 222  Q
    | ||||||  |||||||||||||||||||    
T  28896729 ttaagcgagatagccgtcgcttaagcgaa 28896757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 94 - 222
Target Start/End: Original strand, 28909877 - 28910005
Alignment:
Q  94 tgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgc 193  Q
    ||||||||||||||||||||| |||||||  |||||||| ||||||| |||||||| | |||||||||| ||||||||| || |||||||||  ||||||    
T  28909877 tgtgagcgaaaaaccattttgtttctgtccaaagttcgcccaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgc 28909976  T
Q  194 tcaagcgaactagccgtcgcttaagcgaa 222  Q
    | ||||||  |||||||||||||||||||    
T  28909977 ttaagcgagatagccgtcgcttaagcgaa 28910005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 94 - 222
Target Start/End: Original strand, 28931569 - 28931697
Alignment:
Q  94 tgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgc 193  Q
    ||||||||||||||||||||| |||||||  |||||||| ||||||| |||||||| | |||||||||| ||||||||| || |||||||||  ||||||    
T  28931569 tgtgagcgaaaaaccattttgtttctgtccaaagttcgcccaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgc 28931668  T
Q  194 tcaagcgaactagccgtcgcttaagcgaa 222  Q
    | ||||||  |||||||||||||||||||    
T  28931669 ttaagcgagatagccgtcgcttaagcgaa 28931697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 94 - 222
Target Start/End: Original strand, 28946272 - 28946400
Alignment:
Q  94 tgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgc 193  Q
    ||||||||||||||||||||| |||||||  |||||||| ||||||| |||||||| | |||||||||| ||||||||| || |||||||||  ||||||    
T  28946272 tgtgagcgaaaaaccattttgtttctgtccaaagttcgcccaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgc 28946371  T
Q  194 tcaagcgaactagccgtcgcttaagcgaa 222  Q
    | ||||||  |||||||||||||||||||    
T  28946372 ttaagcgagatagccgtcgcttaagcgaa 28946400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 19236410 - 19236299
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 210  Q
    |||||||||| ||  | |||||| |||||| |||||||| | || ||||||| ||||||||| || |||||||||| ||||||| |||||||||||||||    
T  19236410 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccataagcgaactgaacccagacctactgtaagctggtcgcttaagcgaactagccgt 19236311  T
Q  211 cgcttaagcgaa 222  Q
    ||||||||||||    
T  19236310 cgcttaagcgaa 19236299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 22467290 - 22467181
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 210  Q
    |||||||||| ||  | |||||| |||||| |||||||| | || ||||||| ||||||||| || |||||||||| ||||| | |||||||||||||||    
T  22467290 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccataagcgaactgaacccagacctactgtaagctggtcggttaagcgaactagccgt 22467191  T
Q  211 cgcttaagcg 220  Q
    ||||||||||    
T  22467190 cgcttaagcg 22467181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 22460666 - 22460555
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 210  Q
    |||||||||| ||  | |||||| |||||| |||||||  | || |||||||  |||||||| || |||||||||| ||||||| |||||||||||||||    
T  22460666 tttgattctgccaagaattcgcttaagcgagccgtgagtgacccataagcgaattgaacccagacctactgtaagctggtcgcttaagcgaactagccgt 22460567  T
Q  211 cgcttaagcgaa 222  Q
    ||||||||||||    
T  22460566 cgcttaagcgaa 22460555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 222
Target Start/End: Original strand, 28933070 - 28933200
Alignment:
Q  94 tgtgagcgaaaaacca-ttttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaa-cccaaacttactgtaagccggtc 191  Q
    |||||||||||||||| ||||| |||||||  ||||||||  |||||| |||||||| | |||||||||| ||||| |||| || |||||||||  ||||    
T  28933070 tgtgagcgaaaaaccatttttgtttctgtccaaagttcgccaaagcgagccgtgagcgacccgtaagcgaactgaaccccagacctactgtaagttggtc 28933169  T
Q  192 gctcaagcgaactagccgtcgcttaagcgaa 222  Q
    | | ||||||  ||||||| |||||||||||    
T  28933170 gtttaagcgagatagccgtggcttaagcgaa 28933200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 20819689 - 20819618
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaac-cgtgagcaaaccgtaagcga 162  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||  |||||| |||||| |||||    
T  20819689 cctgtgagcgaaaaaccattttgattctgtccaaatttcgctcaagcgaacttgtgagcgaaccgtgagcga 20819618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 20826789 - 20826718
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaac-cgtgagcaaaccgtaagcga 162  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||  |||||| |||||| |||||    
T  20826789 cctgtgagcgaaaaaccattttgattctgtccaaatttcgctcaagcgaacttgtgagcgaaccgtgagcga 20826718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 263
Target Start/End: Complemental strand, 34829578 - 34829441
Alignment:
Q  127 gttcgctcaagcgaaccgtgagcaaaccgtaagcgagct-gaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtg 225  Q
    |||||||||||||||| | |||| |||||| || ||||  |||||| ||| |  ||| ||| ||||||| |||||| ||| || ||||||||||||| ||    
T  34829578 gttcgctcaagcgaactgcgagcgaaccgtgagtgagcgagaaccccaaccttttgtgagctggtcgcttaagcgagctacccttcgcttaagcgaactg 34829479  T
Q  226 gaccttagtcagccactttctgaactttgctttgtgca 263  Q
      ||||||||| ||  |||||||||||||||| |||||    
T  34829478 agccttagtcaacctttttctgaactttgcttcgtgca 34829441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 22439322 - 22439370
Alignment:
Q  151 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagc 199  Q
    |||| ||||||||| ||||||| ||||||||||||||||||||| ||||    
T  22439322 aaccttaagcgagcagaacccagacttactgtaagccggtcgcttaagc 22439370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 22439360 - 22439406
Alignment:
Q  209 gtcgcttaagcgaagtggaccttagtcagccactttctgaactttgc 255  Q
    ||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  22439360 gtcgcttaagcaaagttgaccttagtcagccactttttgaacgttgc 22439406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 2e-49; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 94 - 287
Target Start/End: Complemental strand, 41111407 - 41111214
Alignment:
Q  94 tgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggtcg 192  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| ||| |||||||||| |||||    
T  41111407 tgtgagcgaaaaaccattttcattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagaacctactgtaagctggtcg 41111308  T
Q  193 ctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattct 287  Q
    || |||||||||||||||||||||||||||||| |||||| ||||||  |||||||||| |||||| ||||| ||||||||| | |||||| ||||    
T  41111307 cttaagcgaactagccgtcgcttaagcgaagtgaaccttaatcagcc-ttttctgaactgttgcttagtgca-tgaggggacttcttgagcgttct 41111214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 18712218 - 18712117
Alignment:
Q  152 accgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact 251  Q
    ||||| ||||||| |||||| ||||| |||||||| ||||||| ||||||||||||||||||||||||||||  |||||||||||||||| || ||||||    
T  18712218 accgttagcgagcggaaccccaactttctgtaagctggtcgcttaagcgaactagccgtcgcttaagcgaagatgaccttagtcagccaccttttgaact 18712119  T
Q  252 tt 253  Q
    ||    
T  18712118 tt 18712117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 222
Target Start/End: Original strand, 20858305 - 20858416
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 210  Q
    |||||||||| ||  | |||||| |||||| |||||||| | |||||||||| ||||||||| || |||||||||| ||||||| |||||||||||||||    
T  20858305 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagctggtcgcttaagcgaactagccgt 20858404  T
Q  211 cgcttaagcgaa 222  Q
    ||||||||||||    
T  20858405 cgcttaagcgaa 20858416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 21705785 - 21705674
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 210  Q
    |||||||||| ||  | |||||| |||||| |||||||| | |||||||||| ||||||||| || |||||||||| ||||||| |||||||||||||||    
T  21705785 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagctggtcgcttaagcgaactagccgt 21705686  T
Q  211 cgcttaagcgaa 222  Q
    ||||||||||||    
T  21705685 cgcttaagcgaa 21705674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 21710328 - 21710217
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 210  Q
    |||||||||| ||  | |||||| |||||| |||||||| |||| ||||||| ||||||||| || |||||||||| ||||||| |||||||||||||||    
T  21710328 tttgattctgccaagaattcgcttaagcgagccgtgagcgaaccataagcgaactgaacccagacctactgtaagctggtcgcttaagcgaactagccgt 21710229  T
Q  211 cgcttaagcgaa 222  Q
    ||||||||||||    
T  21710228 cgcttaagcgaa 21710217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 111 - 222
Target Start/End: Original strand, 20851678 - 20851789
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 210  Q
    |||||||||| ||  | |||||| |||||| |||||||| | || ||||||| ||||||||| || |||||||||| ||||||| |||||||||||||||    
T  20851678 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccataagcgaactgaacccagacctactgtaagctggtcgcttaagcgaactagccgt 20851777  T
Q  211 cgcttaagcgaa 222  Q
    ||||||||||||    
T  20851778 cgcttaagcgaa 20851789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 312
Target Start/End: Original strand, 22030298 - 22030494
Alignment:
Q  117 tctgtcagaagttcgctcaagcgaaccgtgagc-aaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctt 215  Q
    |||| ||||||||||||  |||||||||||||| ||||| | ||||||| |||| | ||||  ||||||||| |||||| |||||| | |||| ||||||    
T  22030298 tctgccagaagttcgcttgagcgaaccgtgagcgaaacccttagcgagcagaacaccaactctctgtaagccagtcgcttaagcgagccagccttcgctt 22030397  T
Q  216 aagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataa 312  Q
    ||||||||  |  |||||||||||||||| | |  |||||||  |||| | |||  | |||||||||||||||| ||| | ||||||||||| |||||    
T  22030398 aagcgaagaaggtcttagtcagccactttttaatttttgcttcttgcact-aggaaatccttttgagcattctataatgtttctttcaacttgtataa 22030494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 312
Target Start/End: Complemental strand, 11157554 - 11157451
Alignment:
Q  209 gtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaactta 307  Q
    |||||||||||||||  ||||||||||| ||||||| |||||||||| | ||||||| |||||| |||||||||||||  ||||| | |||||||||||     
T  11157554 gtcgcttaagcgaagatgaccttagtcaaccactttttgaactttgcctcgtgcatt-aggggatccttttgagcatttaaaaatgtttctttcaacttg 11157456  T
Q  308 tataa 312  Q
    |||||    
T  11157455 tataa 11157451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 263
Target Start/End: Complemental strand, 19961684 - 19961547
Alignment:
Q  126 agttcgctcaagcgaaccgtgagcaaaccgtaagcgagct-gaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagt 224  Q
    ||||||||| |||||||||  ||| |||||| |||||||  ||| |||||||| ||||| || ||||||| |||||| ||| || ||||||||||||  |    
T  19961684 agttcgctcgagcgaaccgcaagcgaaccgtgagcgagcgagaatccaaacttcctgta-gctggtcgcttaagcgagctacccttcgcttaagcgagat 19961586  T
Q  225 ggaccttagtcagccactttctgaactttgctttgtgca 263  Q
    |  |||||||||||| || |||||||||||||| |||||    
T  19961585 gagccttagtcagcctctatctgaactttgcttcgtgca 19961547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 95 - 288
Target Start/End: Complemental strand, 644 - 452
Alignment:
Q  95 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 194  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||||||||| | |||||||||| ||||||||| || |||||||||| |||||||    
T  644 gtgagcgaaaaaccattttgattctgtccaaagttcgctcaatcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagctggtcgct 545  T
Q  195 caagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattcta 288  Q
     ||||||||||||||||||||||||||||||   |||||||||||  |||||||||| || ||| ||||| ||||||||| | ||||||||||||    
T  544 taagcgaactagccgtcgcttaagcgaagtgagtcttagtcagcc-ttttctgaactattacttagtgca-tgaggggacttcttgagcattcta 452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 92 - 288
Target Start/End: Original strand, 8046420 - 8046616
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtc 191  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| || |||| ||||  ||||    
T  8046420 cctgtgagcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactataagttggtc 8046519  T
Q  192 gctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattcta 288  Q
    ||| |||||| |||| ||||||||||||||||||  ||||||||||||  |||||||||| || ||| ||||| ||||||||| | ||||||||||||    
T  8046520 gcttaagcgagctagacgtcgcttaagcgaagtgagccttagtcagcctttttctgaactgttacttagtgca-tgaggggacttcttgagcattcta 8046616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 92 - 239
Target Start/End: Complemental strand, 53483171 - 53483023
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 190  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| |||| |||| | | |||||||||| |||    
T  53483171 cctgtgagcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgagcccagagcctactgtaagctggt 53483072  T
Q  191 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagcc 239  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||||    
T  53483071 cgcttaagcgaacttgccgtcgcttaagcgaagtgaaccttagtcagcc 53483023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 111 - 263
Target Start/End: Complemental strand, 11847614 - 11847462
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagct-gaacccaaacttactgtaagccggtcgctcaagcgaactagccg 209  Q
    |||||||||| ||  | |||||| ||||||||||||||| | ||||||||||||| ||| |||||||| ||||| |  ||||||| |||||||||| |||    
T  11847614 tttgattctgccaagaattcgcttaagcgaaccgtgagcgacccgtaagcgagctagaatccaaacttcctgta-gttggtcgcttaagcgaactacccg 11847516  T
Q  210 tcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgca 263  Q
    ||||||||||||  ||  |||||||||||| |||||||||||||||||||||||    
T  11847515 tcgcttaagcgagctgagccttagtcagcctctttctgaactttgctttgtgca 11847462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 255
Target Start/End: Complemental strand, 15407608 - 15407454
Alignment:
Q  89 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 188  Q
    ||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| |||           |||| ||||| | |||| |||| |||||    
T  15407608 gaacccgtaagcgaaaaaccattttgattctgccagaagttcgctcaagcgaaccgtcagc-----------gagcggaacctagactttctgtgagccg 15407520  T
Q  189 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgc 255  Q
    |||||| ||||||||| ||||||||||||||||||  |||| |||||||||||||| ||||||||||    
T  15407519 gtcgcttaagcgaactggccgtcgcttaagcgaagatgaccatagtcagccacttt-tgaactttgc 15407454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 111 - 281
Target Start/End: Original strand, 16147376 - 16147546
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 210  Q
    |||||||||| ||  | |||||| |||||| |||||||| | |||||||||| ||||||||| || |||||||||  ||||||| |||||| ||||||||    
T  16147376 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagatggtcgcttaagcgagctagccgt 16147475  T
Q  211 cgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgaggggaccttttgag 281  Q
    |||||||||||| ||    ||||||||||  ||||||||| |||||| ||||| | ||||  |||||||||    
T  16147476 cgcttaagcgaactgagtgttagtcagcctttttctgaaccttgcttcgtgcactaagggatccttttgag 16147546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 151 - 242
Target Start/End: Complemental strand, 14486140 - 14486049
Alignment:
Q  151 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccact 242  Q
    |||||| ||||||| |||||||||||  |||||||||||||||| |||||| | |||| ||||||||||||||||  |||||||||||||||    
T  14486140 aaccgtgagcgagcggaacccaaactctctgtaagccggtcgcttaagcgagccagccttcgcttaagcgaagtgagccttagtcagccact 14486049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 263
Target Start/End: Complemental strand, 13887289 - 13887144
Alignment:
Q  117 tctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctta 216  Q
    ||||||||||||| ||| |||||||||||| || |||| | ||||||| |||| | ||||  |||||||||||||| | |||||| | ||||||||||||    
T  13887289 tctgtcagaagtttgcttaagcgaaccgtgcgcgaaccattagcgagcagaacgccaactctctgtaagccggtcgtttaagcgagccagccgtcgctta 13887190  T
Q  217 agcgaagtggaccttagtcagccactttctgaactttgctttgtgca 263  Q
    |||||||  |  |||||| ||||||||| |||| ||||||| |||||    
T  13887189 agcgaagaaggtcttagttagccacttt-tgaattttgcttcgtgca 13887144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 263
Target Start/End: Complemental strand, 13888146 - 13888001
Alignment:
Q  117 tctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctta 216  Q
    ||||||||||||| ||| |||||||||||| || |||| | ||||||| |||| | ||||  |||||||||||||| | |||||| | ||||||||||||    
T  13888146 tctgtcagaagtttgcttaagcgaaccgtgcgcgaaccattagcgagcagaacgccaactctctgtaagccggtcgtttaagcgagccagccgtcgctta 13888047  T
Q  217 agcgaagtggaccttagtcagccactttctgaactttgctttgtgca 263  Q
    |||||||  |  |||||| ||||||||| |||| ||||||| |||||    
T  13888046 agcgaagaaggtcttagttagccacttt-tgaattttgcttcgtgca 13888001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 117 - 249
Target Start/End: Complemental strand, 15244719 - 15244587
Alignment:
Q  117 tctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctta 216  Q
    ||||||||||||||||| ||||||||||||||| | || | ||||||| |||| | ||||  |||||||||||||||| ||||||   | ||||||||||    
T  15244719 tctgtcagaagttcgcttaagcgaaccgtgagcgagccattagcgagcggaacgccaactctctgtaagccggtcgcttaagcgagtcaaccgtcgctta 15244620  T
Q  217 agcgaagtggaccttagtcagccactttctgaa 249  Q
    | |||||  |  |||||||||||||||| ||||    
T  15244619 atcgaagaaggtcttagtcagccactttttgaa 15244587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 244
Target Start/End: Complemental strand, 15307620 - 15307497
Alignment:
Q  121 tcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcg 220  Q
    ||||||||||||| ||||||||||||||| | || | ||||||| |||| | ||||  ||||||| |||||||| |||||| | |||| |||||||||||    
T  15307620 tcagaagttcgcttaagcgaaccgtgagcgagccattagcgagcggaacgccaactctctgtaagtcggtcgcttaagcgagccagccatcgcttaagcg 15307521  T
Q  221 aagtggaccttagtcagccacttt 244  Q
    |||  |  ||||||||||||||||    
T  15307520 aagaaggtcttagtcagccacttt 15307497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 8834385 - 8834195
Alignment:
Q  122 cagaagttcgctcaagcgaaccgtgagcaaaccg-taagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcg 220  Q
    |||||||| |||  |||||||||||||| ||||  | ||||||| |||| | ||||  |||||||||||||||| || | | | |||| |||||||||||    
T  8834385 cagaagtttgcttgagcgaaccgtgagcgaaccccttagcgagcagaacaccaactctctgtaagccggtcgcttaa-caagccagccttcgcttaagcg 8834287  T
Q  221 aagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataa 312  Q
    |||  |  |||||||||||||||| |||  |||||||  |||| | || | | |||||||||| ||||||||| | ||||||||||| |||||    
T  8834286 aagaaggtcttagtcagccactttttgatttttgcttcatgcact-agagaatccttttgagcgttctaaaatgtttctttcaacttgtataa 8834195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 92 - 265
Target Start/End: Complemental strand, 10829 - 10667
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtc 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |           |||||||| ||||||| ||||||||||||||||||    
T  10829 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccct-----------aagcgagcagaacccagacttactgtaagccggtc 10741  T
Q  192 gctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcatt 265  Q
    ||| |||||| |||||||||||||||||||||| || |||||||||||||||| |||||||||| | |||||||    
T  10740 gcttaagcgagctagccgtcgcttaagcgaagttgatcttagtcagccactttttgaactttgcctcgtgcatt 10667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 12437 - 12547
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtc 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||    
T  12437 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcgaaccgtaagcgagctgaacccagacctactgtaagccggtc 12536  T
Q  192 gctcaagcgaa 202  Q
    ||| |||||||    
T  12537 gcttaagcgaa 12547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 311
Target Start/End: Original strand, 12553 - 12636
Alignment:
Q  228 ccttagtcagccactttctgaac-tttgctttgtgcattgaggggaccttttgagcattctaaaatatctctttcaacttatata 311  Q
    |||||||||||| |||||||||| ||||||| |||||  |||||||| | |||||||||||||||||| || || ||||| ||||    
T  12553 ccttagtcagcctctttctgaacttttgcttcgtgca-cgaggggacttcttgagcattctaaaatatttcctttaacttgtata 12636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 2e-46; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 95 - 288
Target Start/End: Complemental strand, 23866078 - 23865885
Alignment:
Q  95 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 194  Q
    |||| |||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| || |||||||||  |||||||    
T  23866078 gtgatcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgct 23865979  T
Q  195 caagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattcta 288  Q
     |||||| |||||||||||||||||||||||   |||||||||||  |||||||||| || ||| ||||| ||||||||| | ||||||||||||    
T  23865978 taagcgagctagccgtcgcttaagcgaagtgagtcttagtcagcctttttctgaactattacttagtgca-tgaggggacttcttgagcattcta 23865885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 17054060 - 17053949
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 190  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| ||| |||||||||| |||    
T  17054060 cctgtgagcgaaaaaccattttcattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagaacctactgtaagctggt 17053961  T
Q  191 cgctcaagcgaa 202  Q
    |||| |||||||    
T  17053960 cgcttaagcgaa 17053949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 255
Target Start/End: Original strand, 14057148 - 14057302
Alignment:
Q  89 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 188  Q
    ||||| ||||| |||||||||||||||||||| || ||||||||||||||||||||| |||           |||| ||||||| |||| |||| |||||    
T  14057148 gaacccgtgagtgaaaaaccattttgattctgccataagttcgctcaagcgaaccgtcagc-----------gagcggaacccagactttctgtgagccg 14057236  T
Q  189 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgc 255  Q
    |||||| |||||| |||||||||||||||||||||  ||||||| ||||||||||| ||||||||||    
T  14057237 gtcgcttaagcgagctagccgtcgcttaagcgaagatgaccttaatcagccacttt-tgaactttgc 14057302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 255
Target Start/End: Complemental strand, 25111508 - 25111354
Alignment:
Q  89 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 188  Q
    ||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| |||           |||| ||||||| |||| |||| || ||    
T  25111508 gaacccgtaagcgaaaaaccattttgattctgccagaagttcgctcaagcgaaccgtcagc-----------gagcggaacccagactttctgtgagtcg 25111420  T
Q  189 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgc 255  Q
    |||||| ||||||||| ||||||||||||||||||  |||| |||||||||||||| ||||||||||    
T  25111419 gtcgcttaagcgaactggccgtcgcttaagcgaagatgaccatagtcagccacttt-tgaactttgc 25111354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 222
Target Start/End: Original strand, 24321216 - 24321327
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 210  Q
    |||||||||| ||  | |||||| |||||| |||||||| | |||||||||| ||||||||| || |||||||||| ||||||| |||||||||||||||    
T  24321216 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagctggtcgcttaagcgaactagccgt 24321315  T
Q  211 cgcttaagcgaa 222  Q
    ||||||||||||    
T  24321316 cgcttaagcgaa 24321327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 312
Target Start/End: Complemental strand, 18613691 - 18613531
Alignment:
Q  151 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 250  Q
    |||||| ||||||| |||||| ||||  |||||||| ||||||| |||||||| |||||||||||||||||||  |||||||||| |||||||| |||||    
T  18613691 aaccgttagcgagcggaaccccaactctctgtaagcaggtcgcttaagcgaaccagccgtcgcttaagcgaagatgaccttagtcggccacttt-tgaac 18613593  T
Q  251 tttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataa 312  Q
    ||||| | ||||| | |||||| ||| |||||||||  ||||| |  |||||||||| |||||    
T  18613592 tttgcctcgtgcact-aggggatcctcttgagcatttaaaaatgttcctttcaacttgtataa 18613531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 89 - 312
Target Start/End: Complemental strand, 888 - 665
Alignment:
Q  89 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 188  Q
    ||||| || ||||||||| |||||  ||||||||||||||||||| ||||||||||  ||| || ||| ||||||   ||||| ||||  ||||||||||    
T  888 gaacccgtaagcgaaaaatcatttccattctgtcagaagttcgcttaagcgaaccgcaagcgaaacgttagcgagggaaaccccaactctctgtaagccg 789  T
Q  189 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattct 287  Q
    |||||| |||||||| |||||||||||||||||||  ||||||||||||||||||| |||||||||| | ||||||| |||||| |||||||||||||      
T  788 gtcgcttaagcgaaccagccgtcgcttaagcgaagatgaccttagtcagccactttttgaactttgcctcgtgcatt-aggggatccttttgagcattaa 690  T
Q  288 aaaatatctctttcaacttatataa 312  Q
    ||||| | |||||||| || |||||    
T  689 aaaatgtttctttcaatttgtataa 665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 162
Target Start/End: Complemental strand, 923 - 875
Alignment:
Q  115 attctgtcagaagttcgctcaagcgaaccgtgagc-aaaccgtaagcga 162  Q
    ||||||||||| | ||||||||||||||||||||| || ||||||||||    
T  923 attctgtcagacgctcgctcaagcgaaccgtgagcgaacccgtaagcga 875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 89 - 306
Target Start/End: Complemental strand, 16303 - 16086
Alignment:
Q  89 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 188  Q
    ||||| || ||||||||| || ||| ||| ||||||||||||||| || |||||||  ||| |||||| ||||||| |||||| ||||| ||||||||||    
T  16303 gaacccgtaagcgaaaaatcaatttcattatgtcagaagttcgcttaaccgaaccgcaagcgaaccgttagcgagcggaaccccaactttctgtaagccg 16204  T
Q  189 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattct 287  Q
    |||||| |||||| ||| |||||||||||||||||  ||||||||||||||||||| |||||||||| | ||||| | |||||| ||||||||||||| |    
T  16203 gtcgcttaagcgagctaaccgtcgcttaagcgaagatgaccttagtcagccactttttgaactttgcctcgtgcact-aggggatccttttgagcatttt 16105  T
Q  288 aaaatatctctttcaactt 306  Q
     |||| |  ||||||||||    
T  16104 taaatgttcctttcaactt 16086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 95 - 287
Target Start/End: Original strand, 9167 - 9358
Alignment:
Q  95 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 194  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | || ||||||| ||||||||| || |||||||||  |||||||    
T  9167 gtgagcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccataagcgaactgaacccagacctactgtaagttggtcgct 9266  T
Q  195 caagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac-tttgctttgtgcattgaggggaccttttgagcattct 287  Q
     |||||| |||||||||||||||||||||||   |||||||||||  ||||| ||| ||| ||| ||||| ||||||||| | |||||||||||    
T  9267 taagcgagctagccgtcgcttaagcgaagtgagtcttagtcagcc-ttttctaaacttttacttagtgca-tgaggggacttcttgagcattct 9358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 158 - 312
Target Start/End: Complemental strand, 3136 - 2982
Alignment:
Q  158 agcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac-tttgct 256  Q
    |||||||  |||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||| |||||||||| ||||||    
T  3136 agcgagcgaaacccagacctactgtaagccggtcgcttaagcgaactagccgtcgcttaagcgaagtgagccttagtcagcctctttctgaacttttgct 3037  T
Q  257 ttgtgcattgaggggaccttttgagcattctaaaatatctctttcaacttatataa 312  Q
    | |||||  |||||||| | |||||||||||||||||| || || ||||| |||||    
T  3036 tcgtgca-cgaggggacttcttgagcattctaaaatatttcctttaacttgtataa 2982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 3217 - 3181
Alignment:
Q  127 gttcgctcaagcgaaccgtgagcaaaccgtaagcgag 163  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  3217 gttcgcttaagcgaaccgtgagcgaaccgtaagcgag 3181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 89 - 285
Target Start/End: Original strand, 581 - 766
Alignment:
Q  89 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 188  Q
    ||||| || ||||||||| || ||| ||||||||||||||||||||||||||||||| |||           ||||  ||||| ||||| ||||||||||    
T  581 gaacccgtaagcgaaaaatcaatttcattctgtcagaagttcgctcaagcgaaccgtcagc-----------gagcgaaaccccaactttctgtaagccg 669  T
Q  189 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcatt 285  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||| | ||||| | |||||| |||||||||||||    
T  670 gtcgcttaagcgaactagccgtcgcttaagcgaagatgaccttagtcagccactttttgaactttgcgtcgtgcact-aggggatccttttgagcatt 766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 188 - 285
Target Start/End: Original strand, 7605 - 7702
Alignment:
Q  188 ggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcatt 285  Q
    ||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||| | ||||| | |||||| |||||||||||||    
T  7605 ggtcgcttaagcgaactagccgtcgcttaagcgaagatgaccttagtcagccactttttgaactttgcgtcgtgcact-aggggatccttttgagcatt 7702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 128 - 285
Target Start/End: Original strand, 3854 - 4011
Alignment:
Q  128 ttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtgga 227  Q
    |||||| ||||||||||  ||| ||||||||  |||| ||||||| ||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||    
T  3854 ttcgcttaagcgaaccgcaagcgaaccgtaattgagcagaacccagactcactgtaagccggtcgcttaagcgaactagacgtcgcttaagcgaagttga 3953  T
Q  228 ccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcatt 285  Q
    ||||||||||||||||| ||||| |||| | ||||||| ||| || |||||||||||||    
T  3954 ccttagtcagccactttttgaacgttgcctcgtgcatt-aggagacccttttgagcatt 4011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 151 - 312
Target Start/End: Complemental strand, 30370 - 30209
Alignment:
Q  151 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 250  Q
    |||||| |||||||  |||| |||||| |||||||||||||||| |||||| | | || ||||||||||||||||  ||||||||||||||||||||||     
T  30370 aaccgtgagcgagcgaaacctaaactttctgtaagccggtcgcttaagcgagccaaccttcgcttaagcgaagtgagccttagtcagccactttctgaat 30271  T
Q  251 tttgctttgtgcattgaggggacc-ttttgagcattctaaaatatctctttcaacttatataa 312  Q
    ||||||| ||||| | |||||||| |||||||||||||||||| | ||||||||||| |||||    
T  30270 tttgcttcgtgcact-aggggacccttttgagcattctaaaatgtttctttcaacttgtataa 30209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 117 - 312
Target Start/End: Original strand, 18961 - 19156
Alignment:
Q  117 tctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctta 216  Q
    ||||||||||||||||| ||||||||||||||| | || | ||||||| |||||| ||||  |||| |||| |||||| || ||| | ||||||| | ||    
T  18961 tctgtcagaagttcgcttaagcgaaccgtgagcgagccattagcgagcggaaccccaactgtctgtgagccagtcgcttaaccgagccagccgtctccta 19060  T
Q  217 agcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataa 312  Q
    ||||||| ||  |||||||||||||||| |||| ||||||| ||||| | |||||| ||||||||||||| |||||| | |||||||||||||||||    
T  19061 agcgaagagggtcttagtcagccactttttgaattttgcttcgtgcact-aggggatccttttgagcattttaaaatgtttctttcaacttatataa 19156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 117 - 312
Target Start/End: Complemental strand, 1322 - 1127
Alignment:
Q  117 tctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctta 216  Q
    ||||||||||||||||| |||||||||||||   | || | ||||||| ||| || ||||  |||| ||||||||||| |||||| | ||||||||||||    
T  1322 tctgtcagaagttcgcttaagcgaaccgtgattgagccattagcgagcggaaacccaactctctgtgagccggtcgcttaagcgagccagccgtcgctta 1223  T
Q  217 agcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataa 312  Q
    ||||||| ||  |||||||||||||||| |||| ||||||| ||||| | |||||| ||||||||||||| |||||| | ||||||||||| |||||    
T  1222 agcgaagagggtcttagtcagccactttttgaattttgcttcgtgcact-aggggatccttttgagcattttaaaatgtttctttcaacttgtataa 1127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 312
Target Start/End: Complemental strand, 504 - 305
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtc 191  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||  | | |||| ||||||||| ||||||| |||| ||||||||| |||    
T  504 cctgtgagcgaaaaaccattttgattctgtcagaagttcgcttaagcgaaccgcaaacgaaccctaagcgagcagaacccagactttctgtaagccagtc 405  T
Q  192 gctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgaggggaccttttgagcattctaaaa 291  Q
    ||                    |||||||||||| ||||||||||||| ||||||||| ||||||| |||||   ||||||| | |||||||||||||||    
T  404 gc--------------------ttaagcgaagtgaaccttagtcagcctctttctgaattttgcttcgtgca-caaggggacatcttgagcattctaaaa 326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 312
Target Start/End: Complemental strand, 7649 - 7450
Alignment:
Q  92 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtc 191  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||  | | |||| ||||||||| ||||||| |||| ||||||||| |||    
T  7649 cctgtgagcgaaaaaccattttgattctgtcagaagttcgcttaagcgaaccgcaaacgaaccctaagcgagcagaacccagactttctgtaagccagtc 7550  T
Q  192 gctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgaggggaccttttgagcattctaaaa 291  Q
    ||                    |||||||||||| ||||||||||||| ||||||||| ||||||| |||||   ||||||| | |||||||||||||||    
T  7549 gc--------------------ttaagcgaagtgaaccttagtcagcctctttctgaattttgcttcgtgca-caaggggacatcttgagcattctaaaa 7471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 254
Target Start/End: Original strand, 34861 - 35015
Alignment:
Q  89 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 188  Q
    ||||| || ||||||||| || ||| ||||||||||||||||||||||||||||||| |||           |||| |||||  ||||| ||||||||||    
T  34861 gaacccgtaagcgaaaaatcaatttcattctgtcagaagttcgctcaagcgaaccgtcagc-----------gagcggaacctcaactttctgtaagccg 34949  T
Q  189 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttg 254  Q
    |||||| ||||||||||||| ||||||||||||||  ||||||||||||||||||| |||||||||    
T  34950 gtcgcttaagcgaactagccatcgcttaagcgaagatgaccttagtcagccactttttgaactttg 35015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 95 - 202
Target Start/End: Complemental strand, 111378 - 111271
Alignment:
Q  95 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 194  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| || |||||||||  |||||||    
T  111378 gtgagcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccatacctactgtaagttggtcgct 111279  T
Q  195 caagcgaa 202  Q
     |||||||    
T  111278 taagcgaa 111271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 111 - 222
Target Start/End: Original strand, 91747 - 91858
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 210  Q
    ||||||||||||  |||||||| |||||||||||||||| | |||||||||| ||||||||| || |||||||||  ||||||| |||||| ||||||||    
T  91747 tttgattctgtccaaagttcgcccaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgcttaagcgagctagccgt 91846  T
Q  211 cgcttaagcgaa 222  Q
    ||||||||||||    
T  91847 cgcttaagcgaa 91858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 111 - 222
Target Start/End: Original strand, 97473 - 97584
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 210  Q
    ||||||||||||  |||||||| |||||||||||||||| | |||||||||| ||||||||| || |||||||||  ||||||| |||||| ||||||||    
T  97473 tttgattctgtccaaagttcgcccaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgcttaagcgagctagccgt 97572  T
Q  211 cgcttaagcgaa 222  Q
    ||||||||||||    
T  97573 cgcttaagcgaa 97584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 154 - 255
Target Start/End: Complemental strand, 6976 - 6876
Alignment:
Q  154 cgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaacttt 253  Q
    ||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||  ||||| ||||||||||||| ||||||||    
T  6976 cgtaagcgagcagaacccagacttactgtaagccggtcgcttaagcgagctagccgtcgcttaagcgaagatgacctcagtcagccacttt-tgaacttt 6878  T
Q  254 gc 255  Q
    ||    
T  6877 gc 6876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 95 - 194
Target Start/End: Original strand, 1343 - 1442
Alignment:
Q  95 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 194  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| || |||||||||| |||||||    
T  1343 gtgagcgaaaaacaattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagctggtcgct 1442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 151 - 285
Target Start/End: Original strand, 4195 - 4329
Alignment:
Q  151 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 250  Q
    |||||||| ||||| ||||||| ||||||||||||| | ||||| ||||||||||| ||||||||||||||||| |||||||||||| |||||  |||||    
T  4195 aaccgtaatcgagcagaacccagacttactgtaagctgatcgcttaagcgaactagacgtcgcttaagcgaagttgaccttagtcagtcacttcttgaac 4294  T
Q  251 tttgctttgtgcattgaggggaccttttgagcatt 285  Q
     |||| | |||||||  | | ||||||||||||||    
T  4295 gttgcctcgtgcattaggagaaccttttgagcatt 4329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 151 - 312
Target Start/End: Complemental strand, 65575 - 65414
Alignment:
Q  151 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 250  Q
    |||||| ||||||| |||||| ||||  |||||||||||||||| |||||||| ||||||| |||||||| ||  ||||||||||||||||||| ||||     
T  65575 aaccgttagcgagcggaaccccaactctctgtaagccggtcgcttaagcgaaccagccgtcacttaagcggagaagaccttagtcagccactttttgaat 65476  T
Q  251 tttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataa 312  Q
    ||||| | ||||| | |||||| |||||||| |||| |||||| | ||||||||||| |||||    
T  65475 tttgcctcgtgcact-aggggatccttttgaacattttaaaatgtttctttcaacttgtataa 65414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 244
Target Start/End: Complemental strand, 1572 - 1445
Alignment:
Q  117 tctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctta 216  Q
    |||||||||||||| || ||||||||||||||| | ||   ||||||| |||||| ||||  |||| ||||||||||| |||||| | |||| |||||||    
T  1572 tctgtcagaagttcacttaagcgaaccgtgagcgagccagtagcgagcggaaccccaactctctgtcagccggtcgcttaagcgagccagccttcgctta 1473  T
Q  217 agcgaagtggaccttagtcagccacttt 244  Q
    ||||||   |  ||||||||||||||||    
T  1472 agcgaacaaggtcttagtcagccacttt 1445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 127 - 291
Target Start/End: Complemental strand, 17661 - 17497
Alignment:
Q  127 gttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtgg 226  Q
    ||||||||||| || |||  ||| ||| || |||||||  ||||||||||| |||||||||||||||| |||||| | |||| ||||||||||||||||     
T  17661 gttcgctcaagagacccgcaagcgaactgtgagcgagcgaaacccaaactttctgtaagccggtcgcttaagcgagccagccttcgcttaagcgaagtga 17562  T
Q  227 accttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaa 291  Q
     |||| ||||||||||||||||| |||| || ||||| | ||| || |||||||||||||||||||    
T  17561 gccttggtcagccactttctgaattttgtttcgtgcact-aggcgagccttttgagcattctaaaa 17497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 116 - 312
Target Start/End: Original strand, 81764 - 81960
Alignment:
Q  116 ttctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctt 215  Q
    ||||| |||||||||||| ||||||||||| ||| ||| || |||||||  ||||  ||||  ||||||| |||||||| |||||| | |||||||||||    
T  81764 ttctgccagaagttcgcttaagcgaaccgtaagcgaactgttagcgagcgaaacctcaactctctgtaagtcggtcgcttaagcgagccagccgtcgctt 81863  T
Q  216 aagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataa 312  Q
    ||||||||| |  |||||||||||||||| |||| ||||||| || ||   |||| | ||||||||||||| |||||| | ||||||||||| |||||    
T  81864 aagcgaagtaggtcttagtcagccactttttgaattttgcttcgtaca-ccagggaatccttttgagcattttaaaatgtttctttcaacttgtataa 81960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 111 - 281
Target Start/End: Original strand, 80036 - 80206
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 210  Q
    |||||||||| ||  | |||||| |||||| |||||||| | |||||||||| ||||||||| || |||||||||  ||||||| |||||| ||||||||    
T  80036 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagatggtcgcttaagcgagctagccgt 80135  T
Q  211 cgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgaggggaccttttgag 281  Q
    |||||||||||| ||    ||||||||||  ||||||||| |||||| ||||| | ||||  |||||||||    
T  80136 cgcttaagcgaactgagtgttagtcagcctttttctgaaccttgcttcgtgcactaagggatccttttgag 80206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 255
Target Start/End: Original strand, 23192 - 23334
Alignment:
Q  102 aaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcga 201  Q
    |||||||||||| |||||| |||||||||||||||||||||||| |||           ||| ||||||| ||||| |||| ||||||| ||  ||||||    
T  23192 aaaaaccattttcattctgccagaagttcgctcaagcgaaccgtcagc-----------gagttgaaccccaactttctgtgagccggttgcctaagcga 23280  T
Q  202 actagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgc 255  Q
     |||||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  23281 gctagccgtcgcttaagcgaagatgaccttagtcagccactttttgaactttgc 23334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 285
Target Start/End: Original strand, 15475 - 15647
Alignment:
Q  102 aaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcga 201  Q
    |||||||||||| |||||| |||||||||||||||||||||||| |||           |||| |||||| ||||| |||| |||| |||||| ||| ||    
T  15475 aaaaaccattttcattctgccagaagttcgctcaagcgaaccgtcagc-----------gagcggaaccccaactttctgtgagccagtcgcttaagtga 15563  T
Q  202 actagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcatt 285  Q
     |||||| ||||||||||||||  ||||||||||||||||||| |||| ||||| | ||||| | |||||| |||||||||||||    
T  15564 gctagccatcgcttaagcgaagatgaccttagtcagccactttttgaaatttgcctcgtgcact-aggggatccttttgagcatt 15647  T

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Target: scaffold0004 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 304
Target Start/End: Complemental strand, 116388 - 116183
Alignment:
Q  89 gaacctgtgagcgaaaaaccattttg-attctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagcc 187  Q
    ||||| || ||||||||| ||||||  ||||||||||||||||||||||||||||||| |||           ||||  || || ||||  |||||||||    
T  116388 gaacccgtaagcgaaaaatcatttttcattctgtcagaagttcgctcaagcgaaccgttagc-----------gagcgaaatcccaactctctgtaagcc 116300  T
Q  188 ggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattc 286  Q
    ||||||| |||||||| |||||||||||||||||||  ||||||||||||||| ||| |||||||||| | ||||| | |||||| ||||||||| |||     
T  116299 ggtcgcttaagcgaaccagccgtcgcttaagcgaagatgaccttagtcagccattttttgaactttgcctcgtgcact-aggggatccttttgagtattt 116201  T
Q  287 taaaatatctctttcaac 304  Q
    |||||| | |||||||||    
T  116200 taaaatgtttctttcaac 116183  T

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Target: scaffold0004; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 285
Target Start/End: Original strand, 129221 - 129355
Alignment:
Q  151 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 250  Q
    |||||| ||||||| |||||| ||||| |||| ||||||||||| |||||| | |||||||||||||||||||  |  |||||||||||||||| ||||     
T  129221 aaccgttagcgagcggaaccccaactttctgtgagccggtcgcttaagcgagccagccgtcgcttaagcgaagaaggtcttagtcagccactttttgaat 129320  T
Q  251 tttgctttgtgcattgagggga-ccttttgagcatt 285  Q
    ||||||| ||||| | |||||| |||||||||||||    
T  129321 tttgcttcgtgcact-aggggatccttttgagcatt 129355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 117 - 312
Target Start/End: Complemental strand, 51749 - 51554
Alignment:
Q  117 tctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctta 216  Q
    |||| |||||||||||| |||||||||||  || |||||| |||||||  ||||  ||||  || | ||| |||| || |||||| | ||||||||||||    
T  51749 tctgccagaagttcgcttaagcgaaccgtatgcgaaccgttagcgagcgaaacctcaactctctatgagctggtcacttaagcgagccagccgtcgctta 51650  T
Q  217 agcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataa 312  Q
    |||||||  |  |||||||||||||||| |||| ||||||||||||| | |||| | ||||||||||||| |||||| | ||||||||||| |||||    
T  51649 agcgaagaaggtcttagtcagccactttttgaattttgctttgtgcact-agggaatccttttgagcattttaaaatgtttctttcaacttgtataa 51554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 111 - 239
Target Start/End: Original strand, 4217 - 4345
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 210  Q
    |||||||||| ||  | |||||| |||||| |||||||| | |||||||||| ||||||||| || |||||||||| ||||||| ||||||||||||| |    
T  4217 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagctggtcgcttaagcgaactagccat 4316  T
Q  211 cgcttaagcgaagtggaccttagtcagcc 239  Q
    |||||||||||| ||  | ||||||||||    
T  4317 cgcttaagcgaactgagcgttagtcagcc 4345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 312
Target Start/End: Original strand, 15521 - 15733
Alignment:
Q  88 agaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagcc 187  Q
    |||||| || ||||||||| |||||  ||| ||||||||||||||||||||||||||| ||| |||       ||    ||||||||||  || |||| |    
T  15521 agaacccgtaagcgaaaaatcatttccattatgtcagaagttcgctcaagcgaaccgttagcgaac-------ga----aacccaaactctctataagac 15609  T
Q  188 ggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattc 286  Q
    ||||||| |||||||| | |||||||||||||||||  ||||||||||||||||||| |||||||||| | ||||| | ||| || |||||||||||||     
T  15610 ggtcgcttaagcgaaccaaccgtcgcttaagcgaagatgaccttagtcagccacttt-tgaactttgcctcgtgcact-aggagatccttttgagcattt 15707  T
Q  287 taaaatatctctttcaacttatataa 312  Q
     ||||| | ||||||||||| |||||    
T  15708 aaaaatgtttctttcaacttgtataa 15733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 304
Target Start/End: Original strand, 102503 - 102656
Alignment:
Q  151 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 250  Q
    |||||| ||||||| |||||| ||||| ||||||| |||||||| |||||||| |||| ||||||||||||||  |||||||||| |||||||| |||||    
T  102503 aaccgtcagcgagcggaaccccaactttctgtaagtcggtcgcttaagcgaaccagccatcgcttaagcgaagatgaccttagtcggccactttttgaac 102602  T
Q  251 tttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaac 304  Q
     |||| | ||||| | |||||| ||||||||| ||| |||||  | |||||||||    
T  102603 cttgcctcgtgcact-aggggatccttttgagtattttaaaaggtttctttcaac 102656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 117 - 312
Target Start/End: Complemental strand, 121406 - 121210
Alignment:
Q  117 tctgtcagaagttcgctcaagcgaaccgtgagcaaaccg-taagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctt 215  Q
    |||| ||||||||||||  |||||||||||||| ||||  | ||||||| |||| | ||||  |||||||||||| ||| |||||| | |||| ||||||    
T  121406 tctgccagaagttcgcttgagcgaaccgtgagcgaaccccttagcgagcagaacaccaactctctgtaagccggttgcttaagcgagccagccttcgctt 121307  T
Q  216 aagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataa 312  Q
    ||||||||  |  |||||||||||||||| |||  ||||||| ||||| | |||| | ||||||||||||| |||||| | ||||||||||| |||||    
T  121306 aagcgaagaaggtcttagtcagccactttttgacttttgcttcgtgcact-agggaatccttttgagcattttaaaatgtttctttcaacttgtataa 121210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 117 - 312
Target Start/End: Complemental strand, 132283 - 132087
Alignment:
Q  117 tctgtcagaagttcgctcaagcgaaccgtgagcaaaccg-taagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctt 215  Q
    |||| ||||||||||||  |||||||||||||| ||||  | ||||||| |||| | ||||  |||||||||||| ||| |||||| | |||| ||||||    
T  132283 tctgccagaagttcgcttgagcgaaccgtgagcgaaccccttagcgagcagaacaccaactctctgtaagccggttgcttaagcgagccagccttcgctt 132184  T
Q  216 aagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataa 312  Q
    ||||||||  |  |||||||||||||||| |||  ||||||| ||||| | |||| | ||||||||||||| |||||| | ||||||||||| |||||    
T  132183 aagcgaagaaggtcttagtcagccactttttgacttttgcttcgtgcact-agggaatccttttgagcattttaaaatgtttctttcaacttgtataa 132087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 204
Target Start/End: Complemental strand, 134960 - 134867
Alignment:
Q  111 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaact 204  Q
    |||||||||||||  | |||||| ||||||||||||||| | |||||||||| ||||||||| || |||||||||| ||||||| |||||||||    
T  134960 tttgattctgtcaagaattcgcttaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagctggtcgcttaagcgaact 134867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 1817 - 1716
Alignment:
Q  205 agccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaa 303  Q
    |||||||||||||||||||  ||||||||||||||||||| |||| ||||| | ||||| | |||||| ||||||||||||| |||||| | ||||||||    
T  1817 agccgtcgcttaagcgaagatgaccttagtcagccactttttgaattttgcctcgtgcact-aggggatccttttgagcattttaaaatgtttctttcaa 1719  T
Q  304 ctt 306  Q
    |||    
T  1718 ctt 1716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 255
Target Start/End: Original strand, 41171 - 41267
Alignment:
Q  158 agcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgc 255  Q
    ||||||| |||||| ||| | |||| ||||| ||||| ||||||||||| ||||||||||||||||  |||||||||||| |||||| ||||||||||    
T  41171 agcgagcggaaccccaaccttctgtgagccgatcgcttaagcgaactagacgtcgcttaagcgaagatgaccttagtcagacacttt-tgaactttgc 41267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 257
Target Start/End: Original strand, 11569 - 11700
Alignment:
Q  126 agttcgctcaagcgaaccgtgagcaaaccgtaagcgagct-gaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagt 224  Q
    ||||||||| |||||||||  ||| | |||| |||||||  ||| |||||||| ||||| || ||||||| |||||||||| || ||||||||||||  |    
T  11569 agttcgctcgagcgaaccgcaagcgatccgtgagcgagcgagaatccaaacttcctgta-gctggtcgcttaagcgaactacccttcgcttaagcgagct 11667  T
Q  225 ggaccttagtcagccactttctgaactttgctt 257  Q
    |  |||||||||||| || ||||||||||||||    
T  11668 gagccttagtcagcctctatctgaactttgctt 11700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 49645 - 49595
Alignment:
Q  95 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgt 145  Q
    ||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  49645 gtgagcgaaaaaccattttgattctgtccaaagttcgctcaatcgaaccgt 49595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 263
Target Start/End: Original strand, 493588 - 493725
Alignment:
Q  127 gttcgctcaagcgaaccgtgagcaaaccgtaagcgagct-gaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtg 225  Q
    |||||||||||||||| |||||| |||||| |||||||  |||||  ||| |  |||  || ||||||| |||||| ||| || ||||||||||||| ||    
T  493588 gttcgctcaagcgaactgtgagcgaaccgtgagcgagcgagaacctcaaccttttgtgtgctggtcgcttaagcgagctacccttcgcttaagcgaactg 493687  T
Q  226 gaccttagtcagccactttctgaactttgctttgtgca 263  Q
      ||||||||||||  ||||||||| |||||| |||||    
T  493688 agccttagtcagcctttttctgaaccttgcttcgtgca 493725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 525204 - 525142
Alignment:
Q  179 ctgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccac 241  Q
    ||||||| |||||||| |||||||| |||| ||||||||||||||  | |||| |||||||||    
T  525204 ctgtaagacggtcgcttaagcgaaccagccttcgcttaagcgaagaaggccttggtcagccac 525142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 263
Target Start/End: Original strand, 24192 - 24267
Alignment:
Q  188 ggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgca 263  Q
    ||||||| |||||| ||| || ||||||||||||  ||  |||||||||| | ||||||||||||||||| |||||    
T  24192 ggtcgcttaagcgagctatccttcgcttaagcgagatgagccttagtcagtctctttctgaactttgcttcgtgca 24267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 24070 - 24106
Alignment:
Q  127 gttcgctcaagcgaaccgtgagcaaaccgtaagcgag 163  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  24070 gttcgcttaagcgaaccgtgagcgaaccgtaagcgag 24106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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