View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0905_low_61 (Length: 215)
Name: NF0905_low_61
Description: NF0905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0905_low_61 |
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Alignment Details
Target: chr1 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 50710259 - 50710138
Alignment:
| Q |
1 |
catcatattctcgtcggcaaaacttcatcgtctcacaaagtgatcgaagcaacaacagtcattttctcaatatacatctcactcaaccgccataaaactc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
50710259 |
catcatattctcgtcggcaaaacttcatcgtctcacaaagtgatcgaagcaacaacagtcattttctcaatatacat----ctcaaccgccataaaactc |
50710164 |
T |
|
| Q |
101 |
tatatgaataaaaactcttctcaaca |
126 |
Q |
| |
|
|||||||||||||||||||||||||| |
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|
| T |
50710163 |
tatatgaataaaaactcttctcaaca |
50710138 |
T |
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