View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0906_low_17 (Length: 398)
Name: NF0906_low_17
Description: NF0906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0906_low_17 |
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Alignment Details
Target: chr2 (Bit Score: 146; Significance: 8e-77; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 154 - 307
Target Start/End: Original strand, 4884860 - 4885013
Alignment:
| Q |
154 |
tcaaccgttatagatgatttgttggtgactcagaaatactctccaaatgaggtctccacacagcaacacgtcctcttcttctatctctctgactacaaac |
253 |
Q |
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| T |
4884860 |
tcaaccgttatagatgatttgttggtgactcagaaatactctccaaatgaggtctccacacagcaacacgtcctcttcttctgtctctctgactacaaac |
4884959 |
T |
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| Q |
254 |
cttctcagacagaatctcagtcaagtactgatcagaagacacaaccaacgtagc |
307 |
Q |
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| T |
4884960 |
cttctcagacagaatctcagtcaagtactgatcagaagaaacaaccaacgtagc |
4885013 |
T |
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