View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0908_high_63 (Length: 293)
Name: NF0908_high_63
Description: NF0908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0908_high_63 |
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Alignment Details
Target: chr6 (Bit Score: 166; Significance: 7e-89; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 46 - 227
Target Start/End: Original strand, 1721490 - 1721671
Alignment:
| Q |
46 |
atcataggacactctaatccaatacaaaaagtgaaacaactaaccccttagacaagcaacaagtgaatacgtatgatacgaggctttggatgggtgatga |
145 |
Q |
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| T |
1721490 |
atcacaggacactctaatccaatacaaaaagtgaaacaactaaccccttagacaagcaacaagtgaatacgtatgataagaggctttgggtgggtgatga |
1721589 |
T |
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| Q |
146 |
tttgtctcgtagctcaggaatcttaataaattacatttgtacatatcaaatgcttaataaagtatatctttaacaatattgg |
227 |
Q |
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| T |
1721590 |
tttgtctcgtagctcaggaatcttaataaattacatttgtacatatcaaatgcttaataaagtatacctttaacaatattgg |
1721671 |
T |
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