View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0908_low_103 (Length: 308)

Name: NF0908_low_103
Description: NF0908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0908_low_103
NF0908_low_103
[»] scaffold0381 (1 HSPs)
scaffold0381 (66-165)||(11032-11133)
[»] chr8 (21 HSPs)
chr8 (66-165)||(1944988-1945089)
chr8 (66-165)||(8160560-8160661)
chr8 (66-165)||(25834138-25834239)
chr8 (66-165)||(8762813-8762914)
chr8 (66-165)||(32846996-32847097)
chr8 (66-165)||(41158444-41158545)
chr8 (66-165)||(41531910-41532011)
chr8 (66-165)||(44380853-44380954)
chr8 (67-165)||(9473923-9474023)
chr8 (67-165)||(18375699-18375799)
chr8 (66-159)||(41978665-41978760)
chr8 (66-165)||(36778280-36778381)
chr8 (67-165)||(25345794-25345894)
chr8 (68-165)||(7391118-7391217)
chr8 (66-139)||(42244476-42244550)
chr8 (66-137)||(4464495-4464567)
chr8 (66-165)||(24055640-24055741)
chr8 (115-165)||(37588311-37588362)
chr8 (66-143)||(25361338-25361416)
chr8 (92-165)||(40586609-40586683)
chr8 (66-165)||(25618640-25618741)
[»] chr7 (17 HSPs)
chr7 (66-165)||(24682418-24682519)
chr7 (66-165)||(29469018-29469119)
chr7 (66-165)||(39648122-39648223)
chr7 (66-165)||(27733094-27733195)
chr7 (67-165)||(17172694-17172794)
chr7 (67-165)||(31896955-31897055)
chr7 (66-165)||(9151219-9151320)
chr7 (66-165)||(21669372-21669473)
chr7 (66-165)||(35155629-35155730)
chr7 (66-165)||(49144175-49144276)
chr7 (71-165)||(48527557-48527653)
chr7 (72-138)||(691116-691183)
chr7 (66-143)||(7855104-7855182)
chr7 (66-143)||(34873643-34873721)
chr7 (66-165)||(4850248-4850349)
chr7 (99-165)||(39278050-39278117)
chr7 (66-165)||(44806378-44806479)
[»] chr5 (16 HSPs)
chr5 (66-165)||(43136415-43136516)
chr5 (66-165)||(752196-752297)
chr5 (66-165)||(33704896-33704997)
chr5 (66-165)||(30181211-30181312)
chr5 (67-165)||(34719258-34719358)
chr5 (66-153)||(34725401-34725489)
chr5 (67-165)||(41692942-41693042)
chr5 (92-165)||(25695705-25695779)
chr5 (66-165)||(36884921-36885022)
chr5 (70-143)||(3086578-3086652)
chr5 (92-165)||(2182653-2182727)
chr5 (66-143)||(42975530-42975608)
chr5 (66-165)||(17636826-17636927)
chr5 (115-165)||(16679590-16679641)
chr5 (115-165)||(16683475-16683526)
chr5 (116-165)||(38937467-38937517)
[»] chr4 (31 HSPs)
chr4 (66-165)||(8964634-8964735)
chr4 (66-165)||(8989001-8989102)
chr4 (66-165)||(9887411-9887512)
chr4 (66-165)||(16652995-16653096)
chr4 (66-165)||(37351901-37352002)
chr4 (66-165)||(37356800-37356901)
chr4 (66-165)||(50043137-50043238)
chr4 (70-165)||(29713625-29713722)
chr4 (66-165)||(39404732-39404833)
chr4 (66-165)||(43023825-43023928)
chr4 (66-165)||(17741463-17741564)
chr4 (66-165)||(46106222-46106323)
chr4 (66-143)||(47555566-47555644)
chr4 (66-165)||(8532027-8532128)
chr4 (67-165)||(39713637-39713737)
chr4 (73-165)||(24944281-24944375)
chr4 (66-165)||(12680775-12680876)
chr4 (68-165)||(52802734-52802833)
chr4 (66-165)||(13172749-13172850)
chr4 (66-165)||(24549223-24549324)
chr4 (66-165)||(30527728-30527829)
chr4 (92-165)||(3759080-3759154)
chr4 (92-165)||(36741967-36742041)
chr4 (116-165)||(46419554-46419604)
chr4 (66-137)||(2118019-2118091)
chr4 (116-165)||(1325551-1325601)
chr4 (116-165)||(26602766-26602816)
chr4 (116-165)||(37061523-37061573)
chr4 (92-165)||(50118235-50118309)
chr4 (110-165)||(5755398-5755454)
chr4 (66-143)||(20590826-20590905)
[»] chr1 (17 HSPs)
chr1 (66-165)||(24289342-24289443)
chr1 (66-165)||(28572960-28573061)
chr1 (66-165)||(33074372-33074473)
chr1 (66-165)||(1375782-1375883)
chr1 (66-165)||(22194608-22194709)
chr1 (68-165)||(1828238-1828337)
chr1 (66-165)||(47137658-47137759)
chr1 (67-165)||(4893768-4893868)
chr1 (67-165)||(29184619-29184719)
chr1 (92-165)||(51964631-51964705)
chr1 (67-143)||(50563295-50563372)
chr1 (67-165)||(33363372-33363472)
chr1 (68-165)||(19320563-19320662)
chr1 (66-143)||(46623517-46623595)
chr1 (66-165)||(16301942-16302043)
chr1 (66-137)||(5428144-5428216)
chr1 (92-165)||(52312023-52312097)
[»] chr6 (12 HSPs)
chr6 (66-165)||(4896102-4896203)
chr6 (67-165)||(1222184-1222284)
chr6 (67-165)||(24447595-24447695)
chr6 (66-165)||(6966378-6966479)
chr6 (66-165)||(9978849-9978950)
chr6 (67-143)||(14832875-14832952)
chr6 (67-165)||(18320527-18320627)
chr6 (66-165)||(15043968-15044069)
chr6 (66-138)||(33319707-33319780)
chr6 (66-165)||(4109856-4109957)
chr6 (66-165)||(9735837-9735938)
chr6 (66-138)||(35159949-35160024)
[»] chr2 (14 HSPs)
chr2 (66-165)||(17838274-17838375)
chr2 (66-153)||(32675884-32675973)
chr2 (67-165)||(9542771-9542871)
chr2 (67-165)||(4289169-4289269)
chr2 (99-165)||(1501514-1501581)
chr2 (66-143)||(18090752-18090830)
chr2 (66-143)||(6931730-6931807)
chr2 (66-165)||(42782474-42782575)
chr2 (115-165)||(1501623-1501674)
chr2 (66-140)||(10874539-10874614)
chr2 (116-165)||(25234784-25234834)
chr2 (116-165)||(25235104-25235154)
chr2 (113-165)||(25234466-25234519)
chr2 (121-165)||(28609746-28609791)
[»] chr3 (14 HSPs)
chr3 (66-165)||(48519796-48519897)
chr3 (68-165)||(19893321-19893420)
chr3 (66-165)||(35860803-35860904)
chr3 (66-165)||(52842986-52843086)
chr3 (66-165)||(55290537-55290638)
chr3 (68-138)||(8396593-8396664)
chr3 (92-165)||(39094351-39094425)
chr3 (66-165)||(26776576-26776677)
chr3 (66-143)||(29528892-29528970)
chr3 (66-165)||(4137543-4137644)
chr3 (66-165)||(28979747-28979848)
chr3 (66-143)||(26100919-26100997)
chr3 (66-137)||(53802192-53802264)
chr3 (66-139)||(19360875-19360949)
[»] scaffold0230 (1 HSPs)
scaffold0230 (67-165)||(26168-26268)
[»] scaffold0032 (1 HSPs)
scaffold0032 (66-165)||(2985-3086)
[»] scaffold0069 (1 HSPs)
scaffold0069 (67-165)||(14448-14548)
[»] scaffold0057 (1 HSPs)
scaffold0057 (67-165)||(17542-17643)
[»] scaffold0009 (1 HSPs)
scaffold0009 (68-165)||(139375-139474)
[»] scaffold0115 (1 HSPs)
scaffold0115 (67-165)||(14812-14912)
[»] scaffold0051 (1 HSPs)
scaffold0051 (67-165)||(55359-55459)
[»] scaffold0432 (1 HSPs)
scaffold0432 (116-165)||(5563-5613)


Alignment Details
Target: scaffold0381 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 11133 - 11032
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaaa-caaaatttttccctagatt 163  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11133 gcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattccttaaagttaacccgaaagcaaaatttttccctagatt 11034  T
Q  164 ta 165  Q
    ||    
T  11033 ta 11032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 1945089 - 1944988
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaaa-caaaatttttccctagatt 163  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1945089 gcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattccttaaagttaacccgaaagcaaaatttttccctagatt 1944990  T
Q  164 ta 165  Q
    ||    
T  1944989 ta 1944988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 8160560 - 8160661
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaaa-caaaatttttccctagatt 163  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8160560 gcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattccttaaagttaacccgaaagcaaaatttttccctagatt 8160659  T
Q  164 ta 165  Q
    ||    
T  8160660 ta 8160661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 25834138 - 25834239
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaaa-caaaatttttccctagatt 163  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25834138 gcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattccttaaagttaacccgaaagcaaaatttttccctagatt 25834237  T
Q  164 ta 165  Q
    ||    
T  25834238 ta 25834239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 8762914 - 8762813
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  8762914 gcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattccttaaagttaacccgaacgcaaaatttttccctagatt 8762815  T
Q  164 ta 165  Q
    ||    
T  8762814 ta 8762813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 32847097 - 32846996
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaaa-caaaatttttccctagatt 163  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||    
T  32847097 gcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattccttaaagttaactcgaaagcaaaaattttccctagatt 32846998  T
Q  164 ta 165  Q
    ||    
T  32846997 ta 32846996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 41158545 - 41158444
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaat-aacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||||||| |||||||||  ||||||| || ||||| |||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  41158545 gcaacacagagcctaaagcactacataaaaaacaacataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctagatt 41158446  T
Q  164 ta 165  Q
    ||    
T  41158445 ta 41158444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 41531910 - 41532011
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    |||| |||||||||||||||| |||||||| ||||||||| || ||||| ||||||||||||||||||||||| |||||  ||||||||| ||||| |||    
T  41531910 gcaatacagagtctaaagcactacataaaaaataacataacaactattgtaatctcttattccttaaagttaatccgaacgcaaaattttgccctaaatt 41532009  T
Q  164 ta 165  Q
    ||    
T  41532010 ta 41532011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 44380853 - 44380954
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||| ||| |||||||| ||||||||| || ||||| |||||||||||||||||||||||||||||  ||||||||| | |||||||    
T  44380853 gcaacacagagcctaaaacactacataaaaaataacataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgctctagatt 44380952  T
Q  164 ta 165  Q
    ||    
T  44380953 ta 44380954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 9474023 - 9473923
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattt 164  Q
    |||||||||| ||||| ||| ||||||||| |||||||| || ||||  ||| ||||||||||||||||||||||||| |||||||||| ||| ||||||    
T  9474023 caacacagagcctaaaacactacataaaaaataacataacaactattataatatcttattccttaaagttaacccgaacacaaaattttgcccaagattt 9473924  T
Q  165 a 165  Q
    |    
T  9473923 a 9473923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 18375699 - 18375799
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattt 164  Q
    ||||||| || ||||| ||| ||||||||| ||| |||| || ||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  18375699 caacacatagcctaaaacactacataaaaaataatataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctagattt 18375798  T
Q  165 a 165  Q
    |    
T  18375799 a 18375799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 41978760 - 41978665
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttcccta 159  Q
    |||||||| || ||||||||| ||||||||| | |||||| || ||||| ||||||||||||||||||||||||||||| ||| |||||| |||||    
T  41978760 gcaacacaaagcctaaagcactacataaaaaattacataacaactattgtaatctcttattccttaaagttaacccgaacacagaattttgcccta 41978665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 36778381 - 36778280
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||| ||| ||||||||| |||||||| || ||||  ||| |||||||||||||||||||||||||  ||||||||| ||| |||||    
T  36778381 gcaacacagagcctaaaacactacataaaaaataacataacaactattataatatcttattccttaaagttaacccgaacgcaaaattttgcccaagatt 36778282  T
Q  164 ta 165  Q
    ||    
T  36778281 ta 36778280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 25345894 - 25345794
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattt 164  Q
    |||||||||| ||||||||| ||||||||| |||||||| || ||||| ||| || |||||||| ||||||| | ||| |||||||||| ||||||||||    
T  25345894 caacacagagcctaaagcactacataaaaaataacataacaactattgtaatatcatattccttgaagttaatctgaacacaaaattttgccctagattt 25345795  T
Q  165 a 165  Q
    |    
T  25345794 a 25345794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 7391217 - 7391118
Alignment:
Q  68 aacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||| ||| ||||| ||||||||| |||||||| || ||||| ||| ||||||||||||||||||| |||||  ||||||||| || ||||||||    
T  7391217 aacacagagcctagagcactacataaaaaataacataacaactattgtaatatcttattccttaaagttaatccgaacgcaaaattttgccatagattta 7391118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 42244476 - 42244550
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacc 139  Q
    ||||||||||||||||| ||| |||||||| ||||||||| || ||||  ||| |||||||||||||||||||||    
T  42244476 gcaacacagagtctaaaacactacataaaaaataacataacaactattataatatcttattccttaaagttaacc 42244550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 4464495 - 4464567
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaa 137  Q
    ||||||||||| |||||||||  ||||||| ||||||||| || ||||| ||| |||||||||||||||||||    
T  4464495 gcaacacagagcctaaagcactgcataaaaaataacataacaactattgtaatatcttattccttaaagttaa 4464567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 24055741 - 24055640
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||| ||| ||||| ||| ||||||||| |||||||| || ||||  ||| |||||||||||||||||||| ||||  ||||||||| ||| |||||    
T  24055741 gcaacactgagcctaaaacactacataaaaaataacataacaactattataatatcttattccttaaagttaactcgaacgcaaaattttgcccaagatt 24055642  T
Q  164 ta 165  Q
    ||    
T  24055641 ta 24055640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 37588311 - 37588362
Alignment:
Q  115 aatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    |||||||||||||||||||||||||||||  | ||||||| |||||||||||    
T  37588311 aatctcttattccttaaagttaacccgaacgccaaattttgccctagattta 37588362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 25361416 - 25361338
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa 143  Q
    |||||||| || ||||| ||| ||||||||| |||||||| || | ||  ||| |||||||||||||||||||||||||    
T  25361416 gcaacacatagcctaaaacactacataaaaaataacataacaactgttctaatatcttattccttaaagttaacccgaa 25361338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 40586609 - 40586683
Alignment:
Q  92 aaaaataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||||||| || ||||  ||| |||||||||||||||||||| ||||  ||||||||| ||| |||||||    
T  40586609 aaaaataacataacaactattataatatcttattccttaaagttaactcgaacgcaaaattttgcccaagattta 40586683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 25618640 - 25618741
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||| ||| ||||||||| ||| |||| || ||||| ||| || ||||||||||||||||  | ||  ||||||||| |||||||||    
T  25618640 gcaacacagagcctaaaacactacataaaaaataatataacaactattgtaatatcatattccttaaagttaattcaaatgcaaaattttgccctagatt 25618739  T
Q  164 ta 165  Q
    ||    
T  25618740 ta 25618741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 24682418 - 24682519
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaaa-caaaatttttccctagatt 163  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24682418 gcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattccttaaagttaacccgaaagcaaaatttttccctagatt 24682517  T
Q  164 ta 165  Q
    ||    
T  24682518 ta 24682519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 29469119 - 29469018
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  29469119 gcaacacagagtctaaagcactacataaaaaataacataacaattattgcaatctcttattccttaaagttaacccgaacacaaaattttaccctagatt 29469020  T
Q  164 ta 165  Q
    ||    
T  29469019 ta 29469018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 39648122 - 39648223
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||||||||| ||| |||||||| ||||||||| || ||||| |||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  39648122 gcaacacagagtctaaaacactacataaaaaataacataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctagatt 39648221  T
Q  164 ta 165  Q
    ||    
T  39648222 ta 39648223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 27733094 - 27733195
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||| ||| |||||||| ||||||||| || ||||| ||||| |||||||||||||||||||||||  ||||||||| |||||||||    
T  27733094 gcaacacagagcctaaaacactacataaaaaataacataacaactattgtaatcttttattccttaaagttaacccgaacgcaaaattttgccctagatt 27733193  T
Q  164 ta 165  Q
    ||    
T  27733194 ta 27733195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 17172794 - 17172694
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattt 164  Q
    |||||||||| ||||| ||| ||||||||| ||| |||| || ||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  17172794 caacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctagattt 17172695  T
Q  165 a 165  Q
    |    
T  17172694 a 17172694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 31896955 - 31897055
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattt 164  Q
    |||||||||| ||||| ||| ||||||||| ||| |||| || ||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  31896955 caacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctagattt 31897054  T
Q  165 a 165  Q
    |    
T  31897055 a 31897055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 9151320 - 9151219
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||||||| ||||||||| |||||||| || ||||| ||| ||||| | |||||||||||||||||  ||||||||| |||||||||    
T  9151320 gcaacacagagcctaaagcactacataaaaaataacataacaactattgtaatatcttaatacttaaagttaacccgaacgcaaaattttgccctagatt 9151221  T
Q  164 ta 165  Q
    ||    
T  9151220 ta 9151219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 21669372 - 21669473
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||  ||||| ||| |||||||| ||||||||| || ||||| |||||||||||||||||||||||||||||  ||||||||| |||| ||||    
T  21669372 gcaacacagatcctaaaacactacataaaaaataacataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctggatt 21669471  T
Q  164 ta 165  Q
    ||    
T  21669472 ta 21669473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 35155629 - 35155730
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||||||||| ||| |||||||| ||||||||| || ||||  ||| |||||||||||||||||||||||||  ||||||||| ||| |||||    
T  35155629 gcaacacagagtctaaaacactacataaaaaataacataacaactattataatatcttattccttaaagttaacccgaacgcaaaattttgcccaagatt 35155728  T
Q  164 ta 165  Q
    ||    
T  35155729 ta 35155730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 49144175 - 49144276
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||||||| |||||||| ||||||||| || ||||| ||| || |||||||||||||||| |||||  ||||||||| |||||||||    
T  49144175 gcaacacagagcctaaagcactacataaaaaataacataacaactattgtaatatcatattccttaaagttaatccgaacgcaaaattttaccctagatt 49144274  T
Q  164 ta 165  Q
    ||    
T  49144275 ta 49144276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 165
Target Start/End: Original strand, 48527557 - 48527653
Alignment:
Q  71 acagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    |||||| ||||| ||| ||||||||| ||| |||| || ||||| ||||||||||||||||||||||| |||||  ||||||||| |||||||||||    
T  48527557 acagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattccttaaagttaatccgaacgcaaaattttgccctagattta 48527653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 691183 - 691116
Alignment:
Q  72 cagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaac 138  Q
    ||||| ||||||||| ||||||||| |||||||| || ||||| ||||||||||||||||||||||||    
T  691183 cagagcctaaagcactacataaaaaataacataacaactattgtaatctcttattccttaaagttaac 691116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 7855104 - 7855182
Alignment:
Q  66 gcaacacagagtctaaagcaccacataa-aaataacataataattattgcaatctcttattccttaaagttaacccgaa 143  Q
    ||||||||||| ||||| ||| |||||| ||||||||||| || ||||  ||| |||||||||||||||||||||||||    
T  7855104 gcaacacagagcctaaaacactacataacaaataacataacaactattataatatcttattccttaaagttaacccgaa 7855182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 34873721 - 34873643
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa 143  Q
    ||||||||||| ||||| ||| ||||||||| |||||||| || ||||  ||| |||||||||||||||||||||||||    
T  34873721 gcaacacagagcctaaaacactacataaaaaataacataacaactattataatatcttattccttaaagttaacccgaa 34873643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 4850349 - 4850248
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| |||||| || ||||||||| ||||||||||| ||||| ||| || |||||| ||||||||| |||||  ||||||||| ||||| |||    
T  4850349 gcaacacagagcctaaagtactacataaaaaataacataataactattgtaatatcatattccctaaagttaatccgaacgcaaaattttgccctatatt 4850250  T
Q  164 ta 165  Q
    ||    
T  4850249 ta 4850248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 39278117 - 39278050
Alignment:
Q  99 acataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    |||||| || ||||| |||||||||||||||||||||||||||||  ||||||||| |||| ||||||    
T  39278117 acataaaaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctggattta 39278050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 44806479 - 44806378
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    |||| |||||| ||||| ||| ||||||||| |||||||| || ||||  ||| ||||||| |||||||||||||||||  ||||||||| ||| |||||    
T  44806479 gcaatacagagcctaaaacactacataaaaaataacataacaactattataatatcttatttcttaaagttaacccgaacgcaaaattttgcccaagatt 44806380  T
Q  164 ta 165  Q
    ||    
T  44806379 ta 44806378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 43136415 - 43136516
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaaa-caaaatttttccctagatt 163  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  43136415 gcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattccttaaagttaacccgaaagcaaaatttttccctagatt 43136514  T
Q  164 ta 165  Q
    ||    
T  43136515 ta 43136516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 752196 - 752297
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaaa-caaaatttttccctagatt 163  Q
    ||||||||||||||||| ||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  752196 gcaacacagagtctaaaacactacataaaaaataacataataactattgcaatctcttattccttaaagttaacccgaaagcaaaatttttccctagatt 752295  T
Q  164 ta 165  Q
    ||    
T  752296 ta 752297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 33704896 - 33704997
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    |||||| |||||||||||||| |||||||| ||||||||| || ||||| |||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  33704896 gcaacagagagtctaaagcactacataaaaaataacataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctagatt 33704995  T
Q  164 ta 165  Q
    ||    
T  33704996 ta 33704997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 30181312 - 30181211
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||| |||  |||||||| |||||||| || ||||| |||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  30181312 gcaacacagagcctaaaacactgcataaaaaataacataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctagatt 30181213  T
Q  164 ta 165  Q
    ||    
T  30181212 ta 30181211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 34719358 - 34719258
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattt 164  Q
    |||||||||| ||||| ||| ||||||||| ||| |||| || ||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  34719358 caacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctagattt 34719259  T
Q  165 a 165  Q
    |    
T  34719258 a 34719258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 153
Target Start/End: Original strand, 34725401 - 34725489
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttt 153  Q
    ||||||||||| |||||||||  |||||||||||||||| || ||||| ||| ||||||||||||||||||| ||||| ||||||||||    
T  34725401 gcaacacagagcctaaagcactgcataaaaataacataacaactattgtaatatcttattccttaaagttaatccgaacacaaaatttt 34725489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 41693042 - 41692942
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattt 164  Q
    |||||||||| ||||| ||| ||||||||| ||| |||| || ||||| ||| |||||||||||||||||||||||||  ||||||||| ||||||||||    
T  41693042 caacacagagcctaaaacactacataaaaaataatataacaactattgtaatatcttattccttaaagttaacccgaacgcaaaattttgccctagattt 41692943  T
Q  165 a 165  Q
    |    
T  41692942 a 41692942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 25695705 - 25695779
Alignment:
Q  92 aaaaataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    |||||||| |||| || ||||| |||||||||||||||||||||||||||||  ||||||||| |||||||||||    
T  25695705 aaaaataatataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctagattta 25695779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 36884921 - 36885022
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||| ||| |||||||| ||||||||| || ||||  ||| |||||||||||||||||||||||||  ||||||||| ||| |||||    
T  36884921 gcaacacagagcctaaaacactacataaaaaataacataacaactattataatatcttattccttaaagttaacccgaacgcaaaattttgcccaagatt 36885020  T
Q  164 ta 165  Q
    ||    
T  36885021 ta 36885022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 143
Target Start/End: Original strand, 3086578 - 3086652
Alignment:
Q  70 cacagagtctaaagcaccacataa-aaataacataataattattgcaatctcttattccttaaagttaacccgaa 143  Q
    ||||||||||||| ||| |||||| ||||||||||| || ||||  ||| |||||||||||||||||||||||||    
T  3086578 cacagagtctaaaacactacataacaaataacataacaactattataatatcttattccttaaagttaacccgaa 3086652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 165
Target Start/End: Complemental strand, 2182727 - 2182653
Alignment:
Q  92 aaaaataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||||||| || ||||| |||||||||||||||||||||||   |||  ||||||||| |||||||||||    
T  2182727 aaaaataacataacaactattgtaatctcttattccttaaagttaatatgaacgcaaaattttgccctagattta 2182653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 42975530 - 42975608
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa 143  Q
    ||||||||||| |||||  || |||||||| ||||||||| || ||||  ||| |||||||||||||||||||||||||    
T  42975530 gcaacacagagcctaaaatactacataaaaaataacataacaactattataatatcttattccttaaagttaacccgaa 42975608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 17636826 - 17636927
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    |||||| |||| ||||| ||| |||||||| ||||||| | || ||||  ||| |||||||||||||||||||||||||  ||||||||| ||| |||||    
T  17636826 gcaacatagagcctaaaacactacataaaaaataacatgacaactattataatatcttattccttaaagttaacccgaatgcaaaattttgcccaagatt 17636925  T
Q  164 ta 165  Q
    ||    
T  17636926 ta 17636927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 16679641 - 16679590
Alignment:
Q  115 aatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    |||||||||||||||||||||||||| ||  ||||||||| |||||||||||    
T  16679641 aatctcttattccttaaagttaacccaaacgcaaaattttgccctagattta 16679590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 16683526 - 16683475
Alignment:
Q  115 aatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    |||||||||||||||||||||||||||||  || |||||| |||||||||||    
T  16683526 aatctcttattccttaaagttaacccgaacgcataattttgccctagattta 16683475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 38937517 - 38937467
Alignment:
Q  116 atctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||||||||||||||||||||||  ||||||||| || ||||||||    
T  38937517 atctcttattccttaaagttaacccgaacgcaaaattttgccatagattta 38937467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 8964735 - 8964634
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaaa-caaaatttttccctagatt 163  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8964735 gcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattccttaaagttaacccgaaagcaaaatttttccctagatt 8964636  T
Q  164 ta 165  Q
    ||    
T  8964635 ta 8964634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 8989102 - 8989001
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaaa-caaaatttttccctagatt 163  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8989102 gcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattccttaaagttaacccgaaagcaaaatttttccctagatt 8989003  T
Q  164 ta 165  Q
    ||    
T  8989002 ta 8989001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 9887411 - 9887512
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaaa-caaaatttttccctagatt 163  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9887411 gcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattccttaaagttaacccgaaagcaaaatttttccctagatt 9887510  T
Q  164 ta 165  Q
    ||    
T  9887511 ta 9887512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 16653096 - 16652995
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaaa-caaaatttttccctagatt 163  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16653096 gcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattccttaaagttaacccgaaagcaaaatttttccctagatt 16652997  T
Q  164 ta 165  Q
    ||    
T  16652996 ta 16652995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 37352002 - 37351901
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaaa-caaaatttttccctagatt 163  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37352002 gcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattccttaaagttaacccgaaagcaaaatttttccctagatt 37351903  T
Q  164 ta 165  Q
    ||    
T  37351902 ta 37351901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 37356901 - 37356800
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaaa-caaaatttttccctagatt 163  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37356901 gcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattccttaaagttaacccgaaagcaaaatttttccctagatt 37356802  T
Q  164 ta 165  Q
    ||    
T  37356801 ta 37356800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 50043238 - 50043137
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaaa-caaaatttttccctagatt 163  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  50043238 gcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattccttaaagttaacccgaaagcaaaatttttccctagatt 50043139  T
Q  164 ta 165  Q
    ||    
T  50043138 ta 50043137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 70 - 165
Target Start/End: Complemental strand, 29713722 - 29713625
Alignment:
Q  70 cacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||||||| ||| ||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  29713722 cacagagtctaaaacactacataaaaaataaaataacaattattgcaatctcttattccttaaagttaacccgaacacaaaattttaccctagattta 29713625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 39404732 - 39404833
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||||||| |||||||| ||||||||| || ||||||||||| ||||||||||||||||||| |||  ||||||||| |||||||||    
T  39404732 gcaacacagagcctaaagcactacataaaaaataacataacaactattgcaatcttttattccttaaagttaacctgaacgcaaaattttaccctagatt 39404831  T
Q  164 ta 165  Q
    ||    
T  39404832 ta 39404833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 43023928 - 43023825
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa---taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctaga 161  Q
    ||||||||||| ||||| ||| |||||||||   |||||||| || |||||||||||||||||||||||||||||||||||  ||||||||| |||||||    
T  43023928 gcaacacagagcctaaaacactacataaaaaaaataacataacaactattgcaatctcttattccttaaagttaacccgaacgcaaaattttgccctaga 43023829  T
Q  162 ttta 165  Q
    ||||    
T  43023828 ttta 43023825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 17741564 - 17741463
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||| ||| ||||||||| |||||||| || ||||| ||||||||||||||||||||||||| |||  ||||||||||||||| |||    
T  17741564 gcaacacagagcctaaaacactacataaaaaataacataacaactattgtaatctcttattccttaaagttaaccggaacgcaaaatttttccctaaatt 17741465  T
Q  164 ta 165  Q
    ||    
T  17741464 ta 17741463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 46106323 - 46106222
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||||||| ||||||||| |||||||| || ||||| ||| || |||||||||||||||| ||||| |||||||||| |||||||||    
T  46106323 gcaacacagagcctaaagcactacataaaaaataacataacaactattgtaatatcatattccttaaagttaatccgaacacaaaattttgccctagatt 46106224  T
Q  164 ta 165  Q
    ||    
T  46106223 ta 46106222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 47555566 - 47555644
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa 143  Q
    ||||||||||| ||||||||| |||||||| ||||||||| || ||||| ||||| |||||||||||||||||||||||    
T  47555566 gcaacacagagcctaaagcactacataaaaaataacataacaactattgtaatcttttattccttaaagttaacccgaa 47555644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 8532128 - 8532027
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| |||||| || ||||||||| |||||||| || ||||| ||||||||||||| |||||||||| ||||  ||||||||| |||||||||    
T  8532128 gcaacacagagcctaaagtactacataaaaaataacataacaactattgtaatctcttattccctaaagttaactcgaacgcaaaattttgccctagatt 8532029  T
Q  164 ta 165  Q
    ||    
T  8532028 ta 8532027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 39713637 - 39713737
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattt 164  Q
    |||||||||| ||||| ||| ||||||||| ||| |||| || ||||| |||||||||||||||||||||||||||||  ||||||||  ||||||||||    
T  39713637 caacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaatttggccctagattt 39713736  T
Q  165 a 165  Q
    |    
T  39713737 a 39713737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 165
Target Start/End: Original strand, 24944281 - 24944375
Alignment:
Q  73 agagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    |||| ||||||||| |||||||| ||||||||| || ||||| ||||| | |||||||||||||||||||||  ||||||||| |||||||||||    
T  24944281 agagcctaaagcactacataaaaaataacataacaactattgtaatctttaattccttaaagttaacccgaacgcaaaattttaccctagattta 24944375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 12680775 - 12680876
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    |||||| |||| ||||||||| |||||||| ||||||||| || ||||| ||| ||||||||||||||||||| |||||  ||||||||| || ||||||    
T  12680775 gcaacatagagcctaaagcactacataaaaaataacataacaactattgtaatatcttattccttaaagttaatccgaacgcaaaattttgccatagatt 12680874  T
Q  164 ta 165  Q
    ||    
T  12680875 ta 12680876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 52802833 - 52802734
Alignment:
Q  68 aacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||| ||||| ||| ||||||||| ||| |||| || ||||| |||||||||||||||||||||||||| ||  | ||||||| |||||||||||    
T  52802833 aacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattccttaaagttaacccaaacgctaaattttgccctagattta 52802734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 13172850 - 13172749
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||| ||  ||||||||| |||||||| || ||||  ||| |||||||||||||||||||||||||  ||||||||| ||| |||||    
T  13172850 gcaacacagagcctaaaacattacataaaaaataacataacaactattataatatcttattccttaaagttaacccgaacgcaaaattttgcccaagatt 13172751  T
Q  164 ta 165  Q
    ||    
T  13172750 ta 13172749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 24549324 - 24549223
Alignment:
Q  66 gcaacacagagtctaaagcaccacataa-aaataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||| ||| |||||| |||| |||||| || ||||  ||| |||||||||||||| ||||||||||  ||||||||||||| |||||    
T  24549324 gcaacacagagcctaaaacactacataacaaatgacataacaactattataatatcttattccttaaatttaacccgaatgcaaaatttttcccaagatt 24549225  T
Q  164 ta 165  Q
    ||    
T  24549224 ta 24549223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 30527728 - 30527829
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    |||| |||||| ||||| ||| |||||||| ||||||||| || ||||  ||| |||||||||||||||||||||||||  ||||||||| ||| |||||    
T  30527728 gcaatacagagcctaaaacactacataaaaaataacataacaactattataatatcttattccttaaagttaacccgaacgcaaaattttgcccaagatt 30527827  T
Q  164 ta 165  Q
    ||    
T  30527828 ta 30527829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 165
Target Start/End: Complemental strand, 3759154 - 3759080
Alignment:
Q  92 aaaaataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||||||| || ||||  ||| |||||||||||||||||||||||||  ||||||||| ||| |||||||    
T  3759154 aaaaataacataacaactattataatatcttattccttaaagttaacccgaacgcaaaattttgcccaagattta 3759080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 36741967 - 36742041
Alignment:
Q  92 aaaaataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||||||| || ||||  ||| |||||||||||||||||||||||||  ||||||||| ||| |||||||    
T  36741967 aaaaataacataacaactattataatatcttattccttaaagttaacccgaacgcaaaattttgcccaagattta 36742041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 46419554 - 46419604
Alignment:
Q  116 atctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  46419554 atctcttattccttaaagttaacccgaacgcaaaagttttccctagattta 46419604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 2118091 - 2118019
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaa 137  Q
    ||||||||||| |||||||||  |||||||| |||||||| || ||||  ||| |||||||||||||||||||    
T  2118091 gcaacacagagcctaaagcactgcataaaaaataacataacaactattataatatcttattccttaaagttaa 2118019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 1325551 - 1325601
Alignment:
Q  116 atctcttattccttaaagttaacccg-aaacaaaatttttccctagattta 165  Q
    |||||||||| ||||||||||||||| |||||| ||||| |||||||||||    
T  1325551 atctcttattacttaaagttaacccgcaaacaatattttgccctagattta 1325601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 26602816 - 26602766
Alignment:
Q  116 atctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||||||||||||||||||||||  ||||||||| || ||||||||    
T  26602816 atctcttattccttaaagttaacccgaacgcaaaattttgccttagattta 26602766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 37061523 - 37061573
Alignment:
Q  116 atctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||||||||||||||||||||||  ||||||||| || ||||||||    
T  37061523 atctcttattccttaaagttaacccgaacgcaaaattttgccttagattta 37061573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 50118235 - 50118309
Alignment:
Q  92 aaaaataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||||||| || ||||  ||| |||||||||||||| ||||||||||  ||||||||| ||| |||||||    
T  50118235 aaaaataacataacaactattataatatcttattccttaaatttaacccgaacgcaaaattttgcccaagattta 50118309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 5755454 - 5755398
Alignment:
Q  110 attgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    |||| ||||||||||||||||||||||||  |||  |||| ||||||||||||||||    
T  5755454 attgtaatctcttattccttaaagttaacttgaacgcaaattttttccctagattta 5755398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 20590905 - 20590826
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa--taacataataattattgcaatctcttattccttaaagttaacccgaa 143  Q
    ||||||| ||| ||||| ||| |||||||||  |||||||| || ||||  ||| |||||||||||||| ||||||||||    
T  20590905 gcaacactgagcctaaaacactacataaaaaaataacataacaactattataatatcttattccttaaaattaacccgaa 20590826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 24289342 - 24289443
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaaa-caaaatttttccctagatt 163  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24289342 gcaacacagagtctaaagcactacataaaaaataacataataactattgcaatctcttattccttaaagttaacccgaaagcaaaatttttccctagatt 24289441  T
Q  164 ta 165  Q
    ||    
T  24289442 ta 24289443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 28573061 - 28572960
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaaa-caaaatttttccctagatt 163  Q
    ||||||||||||||||| ||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28573061 gcaacacagagtctaaaacactacataaaaaataacataataactattgcaatctcttattccttaaagttaacccgaaagcaaaatttttccctagatt 28572962  T
Q  164 ta 165  Q
    ||    
T  28572961 ta 28572960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 33074372 - 33074473
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  33074372 gcaacacagagtctaaagcactacataaaaaataacataacaattattgcaatctcttattccttaaagttaacccgaacacaaaattttaccctagatt 33074471  T
Q  164 ta 165  Q
    ||    
T  33074472 ta 33074473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 1375883 - 1375782
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  1375883 gcaacacagagtctaaagcactacataaaaaataacataacaattattgcaatctcttattccttaaagttaacccaaacacaaaattttaccctagatt 1375784  T
Q  164 ta 165  Q
    ||    
T  1375783 ta 1375782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 22194608 - 22194709
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  22194608 gcaacacagagtctaaagcactacataaaaaataacataacaattattgcaatctcttattccttaaagttaacccaaacacaaaattttaccctagatt 22194707  T
Q  164 ta 165  Q
    ||    
T  22194708 ta 22194709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 1828337 - 1828238
Alignment:
Q  68 aacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    |||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  1828337 aacacaaagtctaaagcactgcataaaaaataacataataattattgcaatctcttattccttaaagttaacccgaacgcaaaaattttccctagattta 1828238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 47137759 - 47137658
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||||||| ||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  47137759 gcaacacagagcctaaagcactacataaaaaataacataataactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctagatt 47137660  T
Q  164 ta 165  Q
    ||    
T  47137659 ta 47137658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 4893868 - 4893768
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattt 164  Q
    |||||||||| ||||| ||| ||||||||| ||| |||| || ||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  4893868 caacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctagattt 4893769  T
Q  165 a 165  Q
    |    
T  4893768 a 4893768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 29184619 - 29184719
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattt 164  Q
    |||||||||| ||||| ||| ||||||||| ||| |||| || ||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  29184619 caacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctagattt 29184718  T
Q  165 a 165  Q
    |    
T  29184719 a 29184719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 51964631 - 51964705
Alignment:
Q  92 aaaaataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||  |||||||||  ||||||||||    
T  51964631 aaaaataacataacaattattgtaatctcttattccttaaagttaacccgaaggcaaaattttgtcctagattta 51964705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 50563372 - 50563295
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa 143  Q
    |||||||||| ||||| ||| ||||||||| |||||||| || ||||| |||||||||||||||||||||||||||||    
T  50563372 caacacagagcctaaaacactacataaaaactaacataacaactattgtaatctcttattccttaaagttaacccgaa 50563295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 33363472 - 33363372
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattt 164  Q
    |||||||||| |||||  || ||||||||| ||| |||| || ||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  33363472 caacacagagcctaaaatactacataaaaaataatataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctagattt 33363373  T
Q  165 a 165  Q
    |    
T  33363372 a 33363372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 19320563 - 19320662
Alignment:
Q  68 aacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||| ||||| ||| |||||||| ||||||||| || ||||  ||| |||||||||||||||||||||||||  ||||||||| |||||||||||    
T  19320563 aacacagagcctaaaacactacataaaaaataacataacaactattataatatcttattccttaaagttaacccgaacgcaaaattttgccctagattta 19320662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 46623517 - 46623595
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa 143  Q
    ||||||||||| ||||| ||| |||||||| ||||||||| || ||||  ||| |||||||||||||||||||||||||    
T  46623517 gcaacacagagcctaaaacactacataaaaaataacataacaactattataatatcttattccttaaagttaacccgaa 46623595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 16302043 - 16301942
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaat-aacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||| ||| |||||||||  ||||||| || ||||| ||| |||| |||||||||||||| |||||  ||||||||| |||||||||    
T  16302043 gcaacacagagcctaaaacactacataaaaaacaacataacaactattgtaatatcttgttccttaaagttaatccgaacgcaaaattttgccctagatt 16301944  T
Q  164 ta 165  Q
    ||    
T  16301943 ta 16301942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 5428216 - 5428144
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaa 137  Q
    ||||||||||| ||||| ||| ||||||||| |||||||| || ||||| ||| |||||||||||||||||||    
T  5428216 gcaacacagagcctaaaacactacataaaaaataacataacaactattgtaatatcttattccttaaagttaa 5428144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 165
Target Start/End: Complemental strand, 52312097 - 52312023
Alignment:
Q  92 aaaaataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||||||| || ||||| ||| |||||||| ||||||||||||| ||  ||||||||| |||||||||||    
T  52312097 aaaaataacataacaactattgtaatttcttattctttaaagttaacccaaatgcaaaattttgccctagattta 52312023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 6e-34; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 4896102 - 4896203
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||    
T  4896102 gcaacacagagtctaaagcaccacataaaaaataacataacaattattgcaatctcttattccttaaagttaacccgaacacaaaattttaccttagatt 4896201  T
Q  164 ta 165  Q
    ||    
T  4896202 ta 4896203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 1222284 - 1222184
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattt 164  Q
    |||||||||| ||||| ||| ||||||||| ||| |||| || ||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  1222284 caacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctagattt 1222185  T
Q  165 a 165  Q
    |    
T  1222184 a 1222184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 24447695 - 24447595
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattt 164  Q
    |||||||||| ||||| ||| ||||||||| ||| |||| || ||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  24447695 caacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctagattt 24447596  T
Q  165 a 165  Q
    |    
T  24447595 a 24447595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 6966378 - 6966479
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||| ||| |||||||| ||||||||| || ||||| ||||||||||||||||||||||||  |||  ||||||||| |||||||||    
T  6966378 gcaacacagagcctaaaacactacataaaaaataacataacaactattgtaatctcttattccttaaagttaacttgaacgcaaaattttgccctagatt 6966477  T
Q  164 ta 165  Q
    ||    
T  6966478 ta 6966479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 9978849 - 9978950
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||| ||| |||||||| ||||||||| || ||||| ||||| |||||||||||||||||||||||   |||||||| |||||||||    
T  9978849 gcaacacagagcctaaaacactacataaaaaataacataacaactattgtaatcttttattccttaaagttaacccgaacgaaaaattttgccctagatt 9978948  T
Q  164 ta 165  Q
    ||    
T  9978949 ta 9978950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 14832952 - 14832875
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa 143  Q
    ||||| |||| ||||||||| ||||||||| |||||||| || ||||| |||||||||||||||||||||||||||||    
T  14832952 caacatagagcctaaagcactacataaaaaataacataacaactattgtaatctcttattccttaaagttaacccgaa 14832875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 18320627 - 18320527
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattt 164  Q
    |||||||||| ||||| ||| ||||||||| ||| |||| || ||||| ||| |||||||||||||||||||||||||  ||||||||| ||||||||||    
T  18320627 caacacagagcctaaaacactacataaaaaataatataacaactattgtaatttcttattccttaaagttaacccgaacgcaaaattttgccctagattt 18320528  T
Q  165 a 165  Q
    |    
T  18320527 a 18320527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 15043968 - 15044069
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||  ||||| ||| |||||||| ||||||||| || ||||| ||||||||||||||||||||||||| |||  ||||||||| |||| ||||    
T  15043968 gcaacacagatcctaaaacactacataaaaaataacataacaactattgtaatctcttattccttaaagttaacctgaacgcaaaattttgccctggatt 15044067  T
Q  164 ta 165  Q
    ||    
T  15044068 ta 15044069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 66 - 138
Target Start/End: Original strand, 33319707 - 33319780
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaac 138  Q
    ||||||||||| ||||| ||| |||||||| ||||||||  |||||||| ||||||||||||||||||||||||    
T  33319707 gcaacacagagcctaaaacacaacataaaaaataacatatcaattattgtaatctcttattccttaaagttaac 33319780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 4109957 - 4109856
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||| ||| ||||||||| |||||||| || ||||| ||| || |||||||||||||||| |||||  |||||||||  ||||||||    
T  4109957 gcaacacagagcctaaaacactacataaaaaataacataacaactattgtaatatcatattccttaaagttaatccgaacgcaaaattttgtcctagatt 4109858  T
Q  164 ta 165  Q
    ||    
T  4109857 ta 4109856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 9735837 - 9735938
Alignment:
Q  66 gcaacacagagtctaaagcaccacataa-aaataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||| ||| |||||| ||||||||||| || ||||  ||| |||||||||||||||||||||| ||  ||||||||| ||| |||||    
T  9735837 gcaacacagagcctaaaacactacataacaaataacataacaactattataatatcttattccttaaagttaaccctaacgcaaaattttgcccaagatt 9735936  T
Q  164 ta 165  Q
    ||    
T  9735937 ta 9735938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 138
Target Start/End: Complemental strand, 35160024 - 35159949
Alignment:
Q  66 gcaacacagagtctaaagcaccacat-aaaaataacataataattattgcaatctct--tattccttaaagttaac 138  Q
    ||||||||||| ||||| ||| |||| ||||||||||||  || ||||| |||||||  |||||||||||||||||    
T  35160024 gcaacacagagcctaaaacacaacataaaaaataacatatcaactattgtaatctcttatattccttaaagttaac 35159949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 8e-27; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 17838375 - 17838274
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||||||||||||| ||||||||| |||||||| |||||||||| |||||||||| |||||||||||||||| |||||||||| | |||||||    
T  17838375 gcaacacagagtctaaagcactacataaaaaataacataacaattattgcagtctcttattcgttaaagttaacccgaacacaaaattttacgctagatt 17838276  T
Q  164 ta 165  Q
    ||    
T  17838275 ta 17838274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 66 - 153
Target Start/End: Original strand, 32675884 - 32675973
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttt 153  Q
    ||||||||||||||||||||| |||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  32675884 gcaacacagagtctaaagcactacataaaaaataacataacaattattgcaatatcttattccttaaagttaacccgaacacaaaatttt 32675973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 9542771 - 9542871
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattt 164  Q
    |||||||||||||||| ||| ||||||||| ||| |||| || ||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  9542771 caacacagagtctaaaacactacataaaaaataatataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctagattt 9542870  T
Q  165 a 165  Q
    |    
T  9542871 a 9542871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 4289169 - 4289269
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattt 164  Q
    |||||||||| ||||| ||| ||||||||| ||| |||| || ||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  4289169 caacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctagattt 4289268  T
Q  165 a 165  Q
    |    
T  4289269 a 4289269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 1501514 - 1501581
Alignment:
Q  99 acataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    |||||| || |||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||    
T  1501514 acataacaactattgcaatctcttattccttaaagttaacccgaatgcaaaattttgccctagattta 1501581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 18090752 - 18090830
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa 143  Q
    |||| |||||| |||||| || |||||||| ||||||||| || ||||| |||||||||||||||||||||||||||||    
T  18090752 gcaatacagagcctaaagtactacataaaaaataacataacaactattgtaatctcttattccttaaagttaacccgaa 18090830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 6931807 - 6931730
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa 143  Q
    |||||||| ||| ||||| || ||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||    
T  6931807 gcaacacatagtataaagtactacataaaaaataacataacaattattt-aatctcttattccttaaagttaacccgaa 6931730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 42782575 - 42782474
Alignment:
Q  66 gcaacacagagtctaaagcaccacataa-aaataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||| ||| |||||| ||||||||||| || ||||  ||| ||||||||| |||||||||||||||  ||||||||| ||| |||||    
T  42782575 gcaacacagagcctaaaacactacataacaaataacataacaactattataatatcttattccataaagttaacccgaacgcaaaattttacccaagatt 42782476  T
Q  164 ta 165  Q
    ||    
T  42782475 ta 42782474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 1501623 - 1501674
Alignment:
Q  115 aatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    |||||||||||||||||||||||||||||  ||||||||| |||||||||||    
T  1501623 aatctcttattccttaaagttaacccgaacgcaaaattttgccctagattta 1501674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 10874539 - 10874614
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaaccc 140  Q
    ||||||||||  ||||| ||| |||||||| ||||||||| || ||||  ||| ||||||||||||||||||||||    
T  10874539 gcaacacagaacctaaaacactacataaaaaataacataacaactattataatatcttattccttaaagttaaccc 10874614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 25234784 - 25234834
Alignment:
Q  116 atctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||||| ||||||||||||||||  ||||||||| |||||||||||    
T  25234784 atctcttattctttaaagttaacccgaacgcaaaattttgccctagattta 25234834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 25235104 - 25235154
Alignment:
Q  116 atctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||||||||||||||||||||||  |||||||||  ||||||||||    
T  25235104 atctcttattccttaaagttaacccgaacgcaaaattttgtcctagattta 25235154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 25234466 - 25234519
Alignment:
Q  113 gcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||||||||||||||||||||| |||  |||||||||  ||||||||||    
T  25234466 gcaatctcttattccttaaagttaacctgaacgcaaaattttgtcctagattta 25234519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 28609791 - 28609746
Alignment:
Q  121 ttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||    
T  28609791 ttattccttaaagttaacccgaacgcaaaattttgccctagattta 28609746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 48519796 - 48519897
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||||||| |||||||| ||||||||| || ||||| ||||||||||||||||||||||||||||| | |||||||| |||||||||    
T  48519796 gcaacacagagcctaaagcactacataaaaaataacataacaactattgtaatctcttattccttaaagttaacccgaacataaaattttgccctagatt 48519895  T
Q  164 ta 165  Q
    ||    
T  48519896 ta 48519897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 19893321 - 19893420
Alignment:
Q  68 aacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    |||||||||| |||||||| |||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||  |||||||||  ||||||||||    
T  19893321 aacacagagtttaaagcactacataaaaaataacataacaattattgtaatctcttattccttaaagttaacccgaatgcaaaattttgacctagattta 19893420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 35860904 - 35860803
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||||||| ||||||||| |||||||| || ||||||||||||||||||||| |||||||||||||  ||||||||| || ||||||    
T  35860904 gcaacacagagcctaaagcactacataaaaaataacataacaactattgcaatctcttattccttcaagttaacccgaacgcaaaattttgccatagatt 35860805  T
Q  164 ta 165  Q
    ||    
T  35860804 ta 35860803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 52843086 - 52842986
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattt 164  Q
    ||||||||| | ||||| ||| |||||||||||| |||| || ||||| ||| |||||||||||||||||||||||||  ||||||||| ||||||||||    
T  52843086 gcaacacagtgactaaaacactacataaaaataatataacaactattgtaatatcttattccttaaagttaacccgaacgcaaaattttgccctagattt 52842987  T
Q  165 a 165  Q
    |    
T  52842986 a 52842986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 55290537 - 55290638
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    |||||||| || ||||| ||| |||||||| ||||||||| |  ||||| |||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  55290537 gcaacacaaagcctaaaacactacataaaaaataacataacagctattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctagatt 55290636  T
Q  164 ta 165  Q
    ||    
T  55290637 ta 55290638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 8396664 - 8396593
Alignment:
Q  68 aacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaac 138  Q
    ||||||||| ||||||||| ||||||||| |||||||| || ||||| ||||||||||||||||||||||||    
T  8396664 aacacagagcctaaagcactacataaaaaataacataacaactattgtaatctcttattccttaaagttaac 8396593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 165
Target Start/End: Complemental strand, 39094425 - 39094351
Alignment:
Q  92 aaaaataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||||||| || ||||| ||| |||||||||||||||||||||||||  ||||||||| |||||||||||    
T  39094425 aaaaataacataacaactattgtaatatcttattccttaaagttaacccgaacgcaaaattttgccctagattta 39094351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 26776576 - 26776677
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||| |||  ||||||| ||||||||| || ||||| ||| || |||||||||||||||| |||||  |||||||||||||||||||    
T  26776576 gcaacacagagcctaaaacactgcataaaaaataacataacaactattgtaatatcatattccttaaagttaatccgaacgcaaaatttttccctagatt 26776675  T
Q  164 ta 165  Q
    ||    
T  26776676 ta 26776677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 29528892 - 29528970
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa 143  Q
    ||||||||||| ||||| ||| |||||||| ||||||||| || ||||  ||| |||||||||||||||||||||||||    
T  29528892 gcaacacagagcctaaaacactacataaaaaataacataacaactattataatatcttattccttaaagttaacccgaa 29528970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 4137543 - 4137644
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||| | ||||||||| |||||||| ||||||||| || ||||| ||| || |||||||||||||||| |||||  ||||||||| |||| ||||    
T  4137543 gcaacacagtgcctaaagcactacataaaaaataacataacaactattgtaatatcatattccttaaagttaatccgaacgcaaaattttgcccttgatt 4137642  T
Q  164 ta 165  Q
    ||    
T  4137643 ta 4137644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 28979747 - 28979848
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    |||||||||||  |||||||  |||||||| ||||||||| || ||||| ||| ||||||| ||||||||||||| |||  ||||||||| |||||||||    
T  28979747 gcaacacagagcttaaagcattacataaaaaataacataacaactattgtaatatcttatttcttaaagttaaccagaacgcaaaattttgccctagatt 28979846  T
Q  164 ta 165  Q
    ||    
T  28979847 ta 28979848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 26100919 - 26100997
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa 143  Q
    |||||||||||  |||| ||| |||||||| ||||||||| || ||||  ||| |||||||||||||||||||||||||    
T  26100919 gcaacacagagcttaaaacactacataaaaaataacataacaactattataatatcttattccttaaagttaacccgaa 26100997  T

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Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 53802264 - 53802192
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaa 137  Q
    ||||||||||| |||||||||  |||||||| |||||||| || ||||  ||| |||||||||||||||||||    
T  53802264 gcaacacagagcctaaagcactgcataaaaaataacataacaactattttaatatcttattccttaaagttaa 53802192  T

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Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 19360875 - 19360949
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacc 139  Q
    ||||||||||| ||||| ||| |||||||| ||||||||| || | ||  ||| |||||||||||||||||||||    
T  19360875 gcaacacagagcctaaaacactacataaaaaataacataacaactcttataatatcttattccttaaagttaacc 19360949  T

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Target: scaffold0230 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 26168 - 26268
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattt 164  Q
    |||||||||| ||||| ||| ||||||||| ||| |||| || ||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  26168 caacacagagcctaaaacactacataaaaaataatataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctagattt 26267  T
Q  165 a 165  Q
    |    
T  26268 a 26268  T

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Target: scaffold0032 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 2985 - 3086
Alignment:
Q  66 gcaacacagagtctaaagcaccacataaaa-ataacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    ||||||||||| ||||| ||| |||||||| ||||||||| || ||||| |||||||||||| ||||||||||||||||  ||||||||| ||||| |||    
T  2985 gcaacacagagcctaaaacactacataaaaaataacataacaactattgtaatctcttattctttaaagttaacccgaacgcaaaattttgccctaaatt 3084  T
Q  164 ta 165  Q
    ||    
T  3085 ta 3086  T

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Target: scaffold0069 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 14548 - 14448
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattt 164  Q
    |||||||| | ||||| ||| ||||||||| ||| |||| || ||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  14548 caacacagtgcctaaaacactacataaaaaataatataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccctagattt 14449  T
Q  165 a 165  Q
    |    
T  14448 a 14448  T

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Target: scaffold0057 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 17542 - 17643
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa--taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagatt 163  Q
    |||||||||| ||||| ||| |||||||||  ||| |||| || ||||| |||||||||||||||||||||||||||||  ||||||||| || ||||||    
T  17542 caacacagagcctaaaacactacataaaaaaataatataacaactattgtaatctcttattccttaaagttaacccgaacgcaaaattttgccatagatt 17641  T
Q  164 ta 165  Q
    ||    
T  17642 ta 17643  T

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Target: scaffold0009 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 139474 - 139375
Alignment:
Q  68 aacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||| ||||| ||| ||||||||| |||||||| || ||||  ||| |||||||||||||||||||||||||  ||||||||| ||| |||||||    
T  139474 aacacagagcctaaaacactacataaaaaataacataacaactattataatatcttattccttaaagttaacccgaacgcaaaattttgcccaagattta 139375  T

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Target: scaffold0115 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 14912 - 14812
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaaac--aaaatttttccctagatt 163  Q
    ||||||| || ||| ||||| ||||||||| |||||||| || |||||  ||||||||||||||||||||||||| ||||  |||| |||||||||||||    
T  14912 caacacatagcctatagcactacataaaaaataacataacaactattgttatctcttattccttaaagttaaccc-aaacgtaaaaattttccctagatt 14814  T
Q  164 ta 165  Q
    ||    
T  14813 ta 14812  T

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Target: scaffold0051 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 55459 - 55359
Alignment:
Q  67 caacacagagtctaaagcaccacataaaaa-taacataataattattgcaatctcttattccttaaagttaacccgaa-acaaaatttttccctagattt 164  Q
    |||||||||| ||||||||| ||||||||| |||||||| || ||||| ||| |  |||||||||||||||| |||||  |||||||||  |||||||||    
T  55459 caacacagagcctaaagcactacataaaaaataacataacaactattgtaatataatattccttaaagttaatccgaacgcaaaattttgtcctagattt 55360  T
Q  165 a 165  Q
    |    
T  55359 a 55359  T

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Target: scaffold0432 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 5613 - 5563
Alignment:
Q  116 atctcttattccttaaagttaacccgaa-acaaaatttttccctagattta 165  Q
    ||||||||||||||||||||||||||||  |||||| || |||||||||||    
T  5613 atctcttattccttaaagttaacccgaacgcaaaatattgccctagattta 5563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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