View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0908_low_65 (Length: 352)

Name: NF0908_low_65
Description: NF0908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0908_low_65
NF0908_low_65
[»] scaffold0153 (1 HSPs)
scaffold0153 (88-281)||(1832-2024)
[»] chr8 (35 HSPs)
chr8 (89-201)||(45465262-45465375)
chr8 (89-201)||(18261607-18261720)
chr8 (93-201)||(27233203-27233312)
chr8 (99-201)||(45559073-45559176)
chr8 (88-201)||(18041668-18041782)
chr8 (111-201)||(38635784-38635874)
chr8 (89-201)||(5854612-5854725)
chr8 (89-201)||(26011492-26011605)
chr8 (89-201)||(33528424-33528536)
chr8 (99-201)||(22497345-22497448)
chr8 (99-201)||(33172236-33172339)
chr8 (89-201)||(33611189-33611302)
chr8 (203-281)||(14665244-14665322)
chr8 (99-201)||(19331450-19331554)
chr8 (123-201)||(29306450-29306528)
chr8 (93-201)||(23226212-23226321)
chr8 (125-201)||(24552706-24552782)
chr8 (111-201)||(15933319-15933409)
chr8 (89-202)||(23151968-23152082)
chr8 (111-197)||(37653756-37653842)
chr8 (89-201)||(23837196-23837309)
chr8 (89-201)||(38533647-38533760)
chr8 (103-201)||(22742773-22742875)
chr8 (126-197)||(20709728-20709799)
chr8 (99-201)||(21198288-21198391)
chr8 (89-201)||(22735974-22736087)
chr8 (112-201)||(31194460-31194549)
chr8 (89-195)||(23149779-23149886)
chr8 (123-201)||(16002031-16002108)
chr8 (113-201)||(39446902-39446990)
chr8 (93-201)||(23158165-23158271)
chr8 (99-200)||(21494593-21494696)
chr8 (113-199)||(41246681-41246767)
chr8 (156-196)||(25296225-25296265)
chr8 (156-196)||(25758245-25758285)
[»] chr7 (39 HSPs)
chr7 (89-201)||(28390310-28390423)
chr7 (89-201)||(13448963-13449076)
chr7 (99-201)||(17947728-17947831)
chr7 (89-197)||(4484725-4484834)
chr7 (89-201)||(20583690-20583803)
chr7 (89-201)||(31501171-31501284)
chr7 (99-201)||(9723943-9724046)
chr7 (99-201)||(46474009-46474112)
chr7 (92-201)||(38424220-38424330)
chr7 (89-201)||(34241324-34241437)
chr7 (89-201)||(48356642-48356755)
chr7 (111-201)||(45149623-45149713)
chr7 (89-201)||(15358795-15358908)
chr7 (89-202)||(14935361-14935472)
chr7 (89-202)||(15362954-15363065)
chr7 (88-201)||(4446209-4446323)
chr7 (91-201)||(16915064-16915175)
chr7 (89-201)||(9611306-9611418)
chr7 (89-201)||(9838878-9838990)
chr7 (89-201)||(13377527-13377640)
chr7 (89-202)||(15368344-15368460)
chr7 (89-201)||(14940751-14940866)
chr7 (137-201)||(33559694-33559758)
chr7 (99-197)||(9321176-9321275)
chr7 (128-201)||(16919597-16919670)
chr7 (122-201)||(13274819-13274898)
chr7 (89-199)||(25124128-25124237)
chr7 (111-201)||(13863066-13863156)
chr7 (113-201)||(49047810-49047898)
chr7 (89-178)||(14272045-14272135)
chr7 (148-201)||(8267864-8267917)
chr7 (123-172)||(8563513-8563562)
chr7 (89-201)||(17224074-17224187)
chr7 (150-201)||(28722169-28722221)
chr7 (88-161)||(4438818-4438893)
chr7 (136-201)||(12248257-12248322)
chr7 (122-194)||(13321047-13321119)
chr7 (113-201)||(26070400-26070488)
chr7 (113-201)||(26094187-26094275)
[»] chr6 (31 HSPs)
chr6 (89-201)||(19854153-19854266)
chr6 (99-201)||(34966875-34966978)
chr6 (99-201)||(29160439-29160542)
chr6 (89-201)||(18629744-18629860)
chr6 (93-201)||(29605452-29605561)
chr6 (89-201)||(22361901-22362014)
chr6 (89-201)||(33538505-33538618)
chr6 (99-201)||(23221922-23222027)
chr6 (89-201)||(25651235-25651348)
chr6 (111-186)||(22462247-22462322)
chr6 (99-201)||(23222755-23222862)
chr6 (95-201)||(18398942-18399049)
chr6 (99-201)||(17557152-17557255)
chr6 (89-199)||(18381821-18381932)
chr6 (120-201)||(17013775-17013857)
chr6 (89-201)||(35009590-35009702)
chr6 (89-202)||(25919611-25919725)
chr6 (89-201)||(25367373-25367486)
chr6 (148-201)||(32352105-32352158)
chr6 (89-197)||(33324691-33324800)
chr6 (89-197)||(35136152-35136261)
chr6 (113-197)||(15079848-15079932)
chr6 (150-201)||(17083333-17083384)
chr6 (89-194)||(19672293-19672390)
chr6 (113-201)||(21623191-21623279)
chr6 (89-202)||(15740227-15740341)
chr6 (89-201)||(16887928-16888041)
chr6 (125-200)||(19629365-19629441)
chr6 (90-139)||(17083376-17083426)
chr6 (156-201)||(22848081-22848126)
chr6 (125-200)||(32276908-32276984)
[»] chr4 (31 HSPs)
chr4 (99-201)||(18238293-18238396)
chr4 (89-198)||(41256508-41256618)
chr4 (99-199)||(50220078-50220179)
chr4 (89-198)||(15013421-15013531)
chr4 (96-201)||(54398388-54398494)
chr4 (99-201)||(13590210-13590313)
chr4 (89-201)||(13442812-13442928)
chr4 (89-201)||(7185980-7186093)
chr4 (122-201)||(41916862-41916941)
chr4 (89-201)||(7964847-7964960)
chr4 (89-201)||(40905070-40905182)
chr4 (201-277)||(18335452-18335528)
chr4 (89-200)||(38764707-38764819)
chr4 (89-201)||(15044826-15044939)
chr4 (88-200)||(52265645-52265758)
chr4 (89-201)||(15109485-15109598)
chr4 (89-197)||(18276432-18276541)
chr4 (150-201)||(47468484-47468535)
chr4 (89-202)||(19821911-19822025)
chr4 (89-202)||(14901230-14901344)
chr4 (113-197)||(27960994-27961078)
chr4 (113-201)||(41166082-41166170)
chr4 (88-139)||(47468527-47468579)
chr4 (122-201)||(13809646-13809725)
chr4 (89-198)||(15675243-15675352)
chr4 (113-199)||(23270072-23270158)
chr4 (89-198)||(31115629-31115738)
chr4 (125-200)||(14996162-14996238)
chr4 (125-200)||(19697517-19697593)
chr4 (125-200)||(19708102-19708178)
chr4 (150-201)||(47535201-47535252)
[»] chr2 (25 HSPs)
chr2 (99-201)||(9636753-9636856)
chr2 (88-201)||(24277758-24277872)
chr2 (99-201)||(6094724-6094827)
chr2 (91-201)||(24884686-24884797)
chr2 (111-201)||(24560867-24560957)
chr2 (112-200)||(33128067-33128155)
chr2 (88-201)||(23821741-23821855)
chr2 (88-201)||(23830820-23830934)
chr2 (89-201)||(19433468-19433581)
chr2 (89-201)||(67990-68103)
chr2 (111-201)||(25595044-25595131)
chr2 (115-201)||(18536780-18536866)
chr2 (89-202)||(19669244-19669358)
chr2 (89-201)||(19666526-19666639)
chr2 (139-201)||(16292937-16292999)
chr2 (89-201)||(22138158-22138271)
chr2 (89-201)||(25265541-25265653)
chr2 (122-201)||(43645925-43646004)
chr2 (99-202)||(28031381-28031486)
chr2 (122-202)||(24294658-24294738)
chr2 (122-194)||(25305477-25305549)
chr2 (99-174)||(3404-3480)
chr2 (129-201)||(24571428-24571500)
chr2 (113-199)||(271193-271279)
chr2 (89-198)||(36982595-36982704)
[»] scaffold0598 (1 HSPs)
scaffold0598 (88-201)||(3249-3362)
[»] scaffold0004 (2 HSPs)
scaffold0004 (88-197)||(27494-27604)
scaffold0004 (88-201)||(86354-86468)
[»] scaffold0148 (1 HSPs)
scaffold0148 (89-201)||(37556-37669)
[»] chr3 (43 HSPs)
chr3 (89-201)||(41661563-41661676)
chr3 (116-202)||(50313213-50313299)
chr3 (89-201)||(12952962-12953075)
chr3 (99-202)||(31412468-31412572)
chr3 (89-201)||(1990800-1990914)
chr3 (122-201)||(14814901-14814980)
chr3 (89-201)||(6228761-6228874)
chr3 (89-201)||(33369044-33369157)
chr3 (99-201)||(43427652-43427753)
chr3 (89-201)||(4162341-4162454)
chr3 (90-201)||(11638356-11638468)
chr3 (88-201)||(11061142-11061256)
chr3 (111-201)||(38375814-38375904)
chr3 (89-201)||(9590890-9591003)
chr3 (89-201)||(3576574-3576687)
chr3 (89-201)||(17191539-17191652)
chr3 (89-201)||(34559897-34560010)
chr3 (89-199)||(51961277-51961386)
chr3 (111-201)||(10912906-10912996)
chr3 (111-197)||(17204721-17204807)
chr3 (89-201)||(39656524-39656637)
chr3 (89-201)||(12488862-12488975)
chr3 (90-202)||(38811143-38811256)
chr3 (99-201)||(47784883-47784986)
chr3 (96-201)||(16880128-16880234)
chr3 (113-201)||(11329097-11329185)
chr3 (122-198)||(15876100-15876176)
chr3 (113-201)||(17139531-17139619)
chr3 (121-198)||(11402620-11402697)
chr3 (113-201)||(14295461-14295549)
chr3 (113-201)||(14528148-14528236)
chr3 (122-201)||(14301097-14301176)
chr3 (110-198)||(12539209-12539300)
chr3 (97-200)||(14284967-14285072)
chr3 (113-201)||(14059349-14059437)
chr3 (125-197)||(14080544-14080616)
chr3 (122-198)||(47984683-47984759)
chr3 (122-198)||(47993970-47994046)
chr3 (122-198)||(48003257-48003333)
chr3 (122-198)||(48012543-48012619)
chr3 (99-200)||(16934118-16934221)
chr3 (125-200)||(8268889-8268965)
chr3 (125-200)||(8275989-8276065)
[»] scaffold0670 (1 HSPs)
scaffold0670 (99-201)||(7811-7914)
[»] chr1 (24 HSPs)
chr1 (89-198)||(21195012-21195122)
chr1 (99-201)||(5768305-5768408)
chr1 (99-201)||(33397360-33397463)
chr1 (88-201)||(8538046-8538160)
chr1 (88-201)||(8603285-8603399)
chr1 (88-201)||(40436405-40436519)
chr1 (93-201)||(17608930-17609039)
chr1 (89-201)||(37233996-37234109)
chr1 (120-201)||(52400661-52400742)
chr1 (111-201)||(76509-76599)
chr1 (89-201)||(22143497-22143610)
chr1 (100-201)||(49997417-49997520)
chr1 (111-174)||(20194065-20194128)
chr1 (129-201)||(25093901-25093970)
chr1 (122-201)||(20177207-20177286)
chr1 (99-200)||(21650184-21650287)
chr1 (156-201)||(16645978-16646023)
chr1 (113-202)||(51627799-51627888)
chr1 (99-202)||(36356428-36356532)
chr1 (122-178)||(41229098-41229154)
chr1 (122-201)||(13376976-13377055)
chr1 (151-201)||(16656699-16656749)
chr1 (133-200)||(20254356-20254424)
chr1 (99-199)||(22403248-22403348)
[»] scaffold0165 (2 HSPs)
scaffold0165 (89-201)||(21997-22110)
scaffold0165 (89-201)||(29962-30075)
[»] chr5 (29 HSPs)
chr5 (89-201)||(6456622-6456735)
chr5 (99-201)||(21109758-21109861)
chr5 (89-201)||(37983362-37983475)
chr5 (92-201)||(29917966-29918076)
chr5 (89-201)||(24084075-24084188)
chr5 (99-201)||(16835435-16835538)
chr5 (122-201)||(22885674-22885753)
chr5 (96-180)||(19873849-19873934)
chr5 (89-201)||(21617014-21617127)
chr5 (99-197)||(23234625-23234724)
chr5 (96-201)||(26559951-26560057)
chr5 (89-201)||(21222744-21222857)
chr5 (99-202)||(23981651-23981755)
chr5 (111-201)||(23417262-23417352)
chr5 (89-201)||(19862207-19862320)
chr5 (89-201)||(23493917-23494030)
chr5 (95-201)||(7728424-7728531)
chr5 (111-197)||(24225457-24225543)
chr5 (124-201)||(432497-432574)
chr5 (89-201)||(5450979-5451092)
chr5 (89-201)||(3673860-3673973)
chr5 (148-201)||(11763641-11763694)
chr5 (89-201)||(16595506-16595619)
chr5 (125-200)||(7528935-7529011)
chr5 (99-200)||(9730527-9730630)
chr5 (89-198)||(22053987-22054096)
chr5 (151-201)||(28902252-28902302)
chr5 (151-201)||(28938647-28938697)
chr5 (122-198)||(18531221-18531297)
[»] scaffold0080 (2 HSPs)
scaffold0080 (89-201)||(43934-44047)
scaffold0080 (122-201)||(23808-23887)
[»] scaffold0700 (1 HSPs)
scaffold0700 (89-201)||(2523-2636)
[»] scaffold0077 (1 HSPs)
scaffold0077 (89-201)||(6542-6655)
[»] scaffold0022 (4 HSPs)
scaffold0022 (89-193)||(131834-131939)
scaffold0022 (115-201)||(68094-68180)
scaffold0022 (95-201)||(103058-103165)
scaffold0022 (113-201)||(109613-109701)
[»] scaffold0009 (1 HSPs)
scaffold0009 (89-201)||(69455-69568)
[»] scaffold0020 (1 HSPs)
scaffold0020 (96-199)||(108015-108119)
[»] scaffold0367 (1 HSPs)
scaffold0367 (122-200)||(17458-17536)
[»] scaffold0023 (1 HSPs)
scaffold0023 (122-200)||(61371-61449)
[»] scaffold0151 (1 HSPs)
scaffold0151 (89-201)||(22558-22671)
[»] scaffold0006 (1 HSPs)
scaffold0006 (89-201)||(197389-197502)
[»] scaffold0253 (2 HSPs)
scaffold0253 (89-201)||(7400-7513)
scaffold0253 (89-201)||(16825-16938)
[»] scaffold0193 (1 HSPs)
scaffold0193 (89-201)||(4603-4716)
[»] scaffold0025 (2 HSPs)
scaffold0025 (100-201)||(85542-85644)
scaffold0025 (89-197)||(53345-53453)
[»] scaffold0561 (1 HSPs)
scaffold0561 (99-201)||(2908-3014)
[»] scaffold0032 (2 HSPs)
scaffold0032 (89-201)||(104759-104871)
scaffold0032 (112-196)||(93913-93997)
[»] scaffold0010 (1 HSPs)
scaffold0010 (89-201)||(31018-31131)
[»] scaffold0028 (1 HSPs)
scaffold0028 (89-202)||(79537-79651)
[»] scaffold0017 (1 HSPs)
scaffold0017 (111-201)||(12786-12876)
[»] scaffold0970 (1 HSPs)
scaffold0970 (113-202)||(2478-2567)
[»] scaffold0162 (2 HSPs)
scaffold0162 (89-201)||(7161-7274)
scaffold0162 (89-196)||(8333-8440)
[»] scaffold0123 (1 HSPs)
scaffold0123 (89-201)||(8008-8121)
[»] scaffold0053 (1 HSPs)
scaffold0053 (89-201)||(76983-77096)
[»] scaffold0387 (1 HSPs)
scaffold0387 (89-176)||(1107-1195)
[»] scaffold0601 (1 HSPs)
scaffold0601 (111-201)||(1010-1100)
[»] scaffold0447 (2 HSPs)
scaffold0447 (88-201)||(4560-4674)
scaffold0447 (88-201)||(9174-9288)
[»] scaffold0389 (1 HSPs)
scaffold0389 (89-198)||(10660-10770)
[»] scaffold0342 (1 HSPs)
scaffold0342 (88-201)||(5937-6051)
[»] scaffold0133 (1 HSPs)
scaffold0133 (120-201)||(25375-25457)
[»] scaffold0065 (1 HSPs)
scaffold0065 (99-201)||(68014-68121)
[»] scaffold0786 (2 HSPs)
scaffold0786 (89-201)||(4460-4573)
scaffold0786 (89-159)||(1592-1663)
[»] scaffold0125 (1 HSPs)
scaffold0125 (89-201)||(41648-41760)
[»] scaffold0132 (1 HSPs)
scaffold0132 (122-201)||(13539-13618)
[»] scaffold0231 (1 HSPs)
scaffold0231 (111-201)||(12870-12960)
[»] scaffold0049 (1 HSPs)
scaffold0049 (111-201)||(33550-33640)
[»] scaffold0521 (1 HSPs)
scaffold0521 (89-197)||(11092-11201)
[»] scaffold0390 (2 HSPs)
scaffold0390 (89-201)||(15977-16090)
scaffold0390 (89-201)||(2993-3106)
[»] scaffold0383 (1 HSPs)
scaffold0383 (88-201)||(7168-7283)
[»] scaffold0150 (1 HSPs)
scaffold0150 (99-201)||(28544-28647)
[»] scaffold0103 (1 HSPs)
scaffold0103 (88-201)||(33659-33773)
[»] scaffold0034 (2 HSPs)
scaffold0034 (88-201)||(46162-46276)
scaffold0034 (93-197)||(40660-40765)
[»] scaffold0406 (1 HSPs)
scaffold0406 (149-194)||(14095-14140)
[»] scaffold0243 (1 HSPs)
scaffold0243 (89-201)||(2452-2565)
[»] scaffold0058 (1 HSPs)
scaffold0058 (89-197)||(70446-70555)
[»] scaffold0018 (1 HSPs)
scaffold0018 (144-201)||(51333-51390)
[»] scaffold0013 (1 HSPs)
scaffold0013 (89-201)||(35476-35589)
[»] scaffold0456 (2 HSPs)
scaffold0456 (91-201)||(1682-1794)
scaffold0456 (91-201)||(8827-8939)
[»] scaffold0031 (1 HSPs)
scaffold0031 (90-201)||(97334-97446)
[»] scaffold1272 (1 HSPs)
scaffold1272 (89-201)||(307-420)
[»] scaffold0095 (1 HSPs)
scaffold0095 (113-201)||(33864-33952)
[»] scaffold0016 (1 HSPs)
scaffold0016 (89-163)||(116687-116762)
[»] scaffold0092 (1 HSPs)
scaffold0092 (136-201)||(3365-3430)
[»] scaffold0335 (1 HSPs)
scaffold0335 (125-200)||(5725-5801)
[»] scaffold0173 (1 HSPs)
scaffold0173 (125-200)||(5256-5332)
[»] scaffold0480 (1 HSPs)
scaffold0480 (122-201)||(9018-9097)
[»] scaffold0075 (1 HSPs)
scaffold0075 (89-199)||(4939-5050)
[»] scaffold0029 (1 HSPs)
scaffold0029 (99-200)||(49992-50095)
[»] scaffold0483 (1 HSPs)
scaffold0483 (89-194)||(6659-6765)
[»] scaffold0021 (1 HSPs)
scaffold0021 (113-198)||(132389-132474)
[»] scaffold0014 (1 HSPs)
scaffold0014 (113-198)||(85355-85440)
[»] scaffold0003 (1 HSPs)
scaffold0003 (88-148)||(147550-147611)
[»] scaffold0002 (1 HSPs)
scaffold0002 (236-273)||(270734-270771)
[»] scaffold1278 (1 HSPs)
scaffold1278 (111-163)||(1417-1469)
[»] scaffold0610 (1 HSPs)
scaffold0610 (113-201)||(712-800)
[»] scaffold0120 (1 HSPs)
scaffold0120 (113-201)||(21535-21623)


Alignment Details
Target: scaffold0153 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 88 - 281
Target Start/End: Original strand, 1832 - 2024
Alignment:
Q  88 acatcatcaattcatgatttatgacacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1832 acatcatcaattcatgatttatgacacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 1931  T
Q  188 tcaacaacaacatataatcccctaaaacaggtatgaaagctataattgtaaaccaggatcaaatctatggaagcattggtttatacattcatct 281  Q
    || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1932 tc-acaacaacatataatcccctaaaacatgtatgaaagctataattgtaaaccaggatcaaatctatggaagcattggtttatacattcatct 2024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 3e-48; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 45465375 - 45465262
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  45465375 catcatcaattcatgatttatgaacacccaaactatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaat 45465276  T
Q  188 tcaacaacaacata 201  Q
    ||||||| ||||||    
T  45465275 tcaacaataacata 45465262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 18261720 - 18261607
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18261720 catcatcaactcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaat 18261621  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  18261620 tcaacaacaacata 18261607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 27233312 - 27233203
Alignment:
Q  93 atcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaa 191  Q
    ||||| ||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27233312 atcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaattcaa 27233213  T
Q  192 caacaacata 201  Q
    ||||||||||    
T  27233212 caacaacata 27233203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 45559176 - 45559073
Alignment:
Q  99 tcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45559176 tcatgatttatgaccacccaagctatgaatcatcaacaacaatatcccttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaa 45559077  T
Q  198 cata 201  Q
    ||||    
T  45559076 cata 45559073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 18041782 - 18041668
Alignment:
Q  88 acatcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaa 186  Q
    ||||||| || ||||||||||||| |||| || ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  18041782 acatcataaactcatgatttatgaacacctaagctatgaatcatcaacaacaatatatcttaacaacaacaacatcaattaaacatgattctcatcacaa 18041683  T
Q  187 ttcaacaacaacata 201  Q
     ||||||||||||||    
T  18041682 atcaacaacaacata 18041668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 111 - 201
Target Start/End: Complemental strand, 38635874 - 38635784
Alignment:
Q  111 acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  38635874 acacccaagccatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcataattcaacaacaacata 38635784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 5854612 - 5854725
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||||||| | |||||||||||||||||||||| |||| ||||| ||||||||||| ||||||| ||||||||||||    
T  5854612 catcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcacaat 5854711  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  5854712 tcaacaacaacata 5854725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 26011492 - 26011605
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||||||| | |||||||||||||||||||||| |||| ||||| ||||||||||| ||||||| ||||||||||||    
T  26011492 catcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattcaacatgaatctcatcacaat 26011591  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  26011592 tcaacaacaacata 26011605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 33528424 - 33528536
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||||||| | ||||||||||||||| ||||||||||| ||||| ||||||||||||||||||| ||||||||||||    
T  33528424 catcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaa-aatatctcttagcaacaacaacatcaattaaacatgaatctcatcacaat 33528522  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  33528523 tcaacaacaacata 33528536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 22497448 - 22497345
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    ||||||||||||| ||||||||||||||||||| |||||||||| |||||| ||||| ||||||||||||||||||| ||||||||||| ||||||||||    
T  22497448 tcatgatttatgaacacccaaactatgaatcattaacaacaatacctcttatcaacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaa 22497349  T
Q  198 cata 201  Q
    ||||    
T  22497348 cata 22497345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 33172236 - 33172339
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    ||||||||||||| ||| ||| |||||||||||||||||| ||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||    
T  33172236 tcatgatttatgaacacgcaagctatgaatcatcaacaaccatatctctttataacaacaacatcaattaaacatgattctcatcacaattcaacaacaa 33172335  T
Q  198 cata 201  Q
    ||||    
T  33172336 cata 33172339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 33611302 - 33611189
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||| ||| | |||||||||||||||||||||| |||| ||||| |||||||||||||||||| |||||| ||||||    
T  33611302 catcatcaaatcatgatttatgaacacacaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattaaacatggttctcaacacaat 33611203  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  33611202 tcaacaacaacata 33611189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 14665322 - 14665244
Alignment:
Q  203 aatcccctaaaacaggtatgaaagctataattgtaaaccaggatcaaatctatggaagcattggtttatacattcatct 281  Q
    ||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  14665322 aatcccccaaaacaggtatgaaagctataattgtaaaccacgatctaatctatggaagcattggtttatacattcatct 14665244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 19331554 - 19331450
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaa-caatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaaca 196  Q
    |||||||| |||| |||| || ||||||||||||||||| |||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||    
T  19331554 tcatgattcatgaacacctaagctatgaatcatcaacaaacaatatctctcaataacaacaacatcaattaaacatgattctcatcacaattcaacaaca 19331455  T
Q  197 acata 201  Q
    |||||    
T  19331454 acata 19331450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 29306450 - 29306528
Alignment:
Q  123 tgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  29306450 tgaatcatcaacaacaatatcacttagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaacata 29306528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 23226321 - 23226212
Alignment:
Q  93 atcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaa 191  Q
    ||||| |||||| ||||||  |||||| | |||||||||||||||||||||| |||||||||| ||||||||||| |||||| ||||||||| |||||||    
T  23226321 atcaaatcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttaacaacaacaacatcaattgaacatggttctcatcataattcaa 23226222  T
Q  192 caacaacata 201  Q
    ||||||||||    
T  23226221 caacaacata 23226212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 24552782 - 24552706
Alignment:
Q  125 aatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||    
T  24552782 aatcatcaacaaccatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaattaacaacaacata 24552706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 111 - 201
Target Start/End: Original strand, 15933319 - 15933409
Alignment:
Q  111 acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||||| | |||||||||||||||||||||| |||| ||||| ||||||||||| ||||||| |||||||| |||||||||||||||||    
T  15933319 acacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaacata 15933409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 23152082 - 23151968
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||||||||||| |||||| ||||||| | |||||||||||||||||||||| | || ||||| || |||||||| |||| | ||||||||| |||    
T  23152082 catcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacatagcaacaacagcatcaattgaacacggttctcatcataat 23151983  T
Q  188 tcaacaacaacatat 202  Q
    |||||||||||||||    
T  23151982 tcaacaacaacatat 23151968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 37653842 - 37653756
Alignment:
Q  111 acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    |||||||| | || ||||||||||||||||||  |||||||||| ||||||||||||||||||||||||| || |||||||||||||    
T  37653842 acacccaagccataaatcatcaacaacaatattccttaacaacaacaacatcaattaaacatgattctcaacagaattcaacaacaa 37653756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 23837196 - 23837309
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| ||| |||||| ||||||  |||||| | |||||||||||||||||| ||| |||| ||||| ||||||||||| ||||||| ||| | ||||||    
T  23837196 catcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttaccacaat 23837295  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  23837296 tcaacaacaacata 23837309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 38533647 - 38533760
Alignment:
Q  89 catcatcaattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| ||| |||||| ||||| |||||||| | |||||| |||| |||||| ||| | || ||||| ||||||||||| ||||||| ||||||||||||    
T  38533647 catcaacaaatcatgaattatgcacacccaagccatgaattatcatcaacaacatcacctagcaacaacaacatcaattgaacatgaatctcatcacaat 38533746  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  38533747 tcaacaacaacata 38533760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 22742773 - 22742875
Alignment:
Q  103 gatttatga-cacccaaactatgaatcatcaacaacaatatctct---taacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaac 198  Q
    ||||||||| ||||||| | | |||||||||||||||||||  ||    ||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  22742773 gatttatgaacacccaagccacgaatcatcaacaacaatattcctcaacaacaacaacaacatcaattaaacatgattctcatcataattcaacaacaac 22742872  T
Q  199 ata 201  Q
    |||    
T  22742873 ata 22742875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 197
Target Start/End: Original strand, 20709728 - 20709799
Alignment:
Q  126 atcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    |||||| |||||||||||||| |||| || |||||||||||||||||||||||||||| || ||||||||||    
T  20709728 atcatctacaacaatatctctcaacatcaacaacatcaattaaacatgattctcatcaaaactcaacaacaa 20709799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 21198391 - 21198288
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    |||||| |||||| ||||||| | ||||||||| |||| ||| ||| |||| ||||| ||||||||||| ||||||||||| | ||||||||||||||||    
T  21198391 tcatgaattatgaacacccaagccatgaatcattaacagcaacatcacttagcaacaacaacatcaattgaacatgattcttaccacaattcaacaacaa 21198292  T
Q  198 cata 201  Q
    ||||    
T  21198291 cata 21198288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 22736087 - 22735974
Alignment:
Q  89 catcatcaattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| |||||||||| ||||| |||||||| | |||||| | ||||||||| |||  ||| ||| | ||||||||||| ||||||| ||| ||||||||    
T  22736087 catcaacaattcatgaattatgcacacccaagccatgaattaacaacaacaacatcagttagcaagaacaacatcaattgaacatgaatcttatcacaat 22735988  T
Q  188 tcaacaacaacata 201  Q
     |||||||||||||    
T  22735987 ccaacaacaacata 22735974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 112 - 201
Target Start/End: Complemental strand, 31194549 - 31194460
Alignment:
Q  112 cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||||| ||||||||||||||||||||||||  ||| ||||| ||||||||||| ||||||  |  || || |||||||||||||||||    
T  31194549 cacccaagctatgaatcatcaacaacaatatcatttagcaacaacaacatcaattgaacatggataacaacataattcaacaacaacata 31194460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 195
Target Start/End: Original strand, 23149779 - 23149886
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| |||||| ||||||  || ||| | |||||||||||||||||| ||| |||| |||||  |||| | ||| |||||||||||||||| |||    
T  23149779 catcatcaaatcatgaattatgaatactcaagccatgaatcatcaacaacaacatcacttagcaacaaaaacaactattgaacatgattctcatcataat 23149878  T
Q  188 tcaacaac 195  Q
    ||||||||    
T  23149879 tcaacaac 23149886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 16002031 - 16002108
Alignment:
Q  123 tgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||| ||||||||||| ||||| |||||||| ||||||||||||||||||  || || ||||| ||||||||||||||    
T  16002031 tgaataatcaacaacaacatctcataacaacaacaacatcaattaaacatggatc-caccacaaatcaacaacaacata 16002108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 39446990 - 39446902
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||| | |||||| || | |||||| ||| |||| ||||| ||||||||||| | ||||| ||| ||||||||||||||||||||||    
T  39446990 acccaagccatgaattattatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacata 39446902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 201
Target Start/End: Original strand, 23158165 - 23158271
Alignment:
Q  93 atcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaa 191  Q
    ||||| |||||| |||||| ||||||| | |||||||||||||||||   || ||||  |||| ||||| | ||| |||||| ||||||||| |||||||    
T  23158165 atcaaatcatgaattatgaacacccaagccatgaatcatcaacaaca---tcacttaggaacaacaacaactattgaacatggttctcatcataattcaa 23158261  T
Q  192 caacaacata 201  Q
    ||||||||||    
T  23158262 caacaacata 23158271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 21494696 - 21494593
Alignment:
Q  99 tcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaatt-aaacatgattctcatcacaattcaacaaca 196  Q
    ||||||| |||| ||||||||  ||| |||||| |||||||| || ||| | ||||| ||||||||||| |||| ||||||||| | |||| ||||||||    
T  21494696 tcatgatatatgcacacccaagttataaatcataaacaacaacatatctcagcaacaacaacatcaattgaaacttgattctcacctcaatccaacaaca 21494597  T
Q  197 acat 200  Q
    ||||    
T  21494596 acat 21494593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 41246681 - 41246767
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaaca 199  Q
    |||||| | |||||| |||| |||||| ||  |||||||||| ||||||||||| | |||||  || ||||||||||| ||||||||    
T  41246681 acccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaaca 41246767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 25296225 - 25296265
Alignment:
Q  156 caacatcaattaaacatgattctcatcacaattcaacaaca 196  Q
    ||||||||||||||||| |||||||||| |||| |||||||    
T  25296225 caacatcaattaaacataattctcatcataattgaacaaca 25296265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 25758245 - 25758285
Alignment:
Q  156 caacatcaattaaacatgattctcatcacaattcaacaaca 196  Q
    ||||||||||||||||| |||||||||| |||| |||||||    
T  25758245 caacatcaattaaacataattctcatcataattgaacaaca 25758285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 8e-46; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 28390310 - 28390423
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  28390310 catcatcaattcatgatttatgaacacccaaactatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattatcatcacaat 28390409  T
Q  188 tcaacaacaacata 201  Q
    ||||||| ||||||    
T  28390410 tcaacaataacata 28390423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 13449076 - 13448963
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||||||||||||||| | ||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13449076 catcatcaattcatgatttatcaacacccaagctacgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaat 13448977  T
Q  188 tcaacaacaacata 201  Q
    ||||||| ||||||    
T  13448976 tcaacaataacata 13448963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 17947831 - 17947728
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  17947831 tcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaa 17947732  T
Q  198 cata 201  Q
    ||||    
T  17947731 cata 17947728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 4484725 - 4484834
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| |||||||| ||||  |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4484725 catcatcaaatcatgattcatgaatacccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaat 4484824  T
Q  188 tcaacaacaa 197  Q
    ||||||||||    
T  4484825 tcaacaacaa 4484834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 20583803 - 20583690
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||||||| | |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||    
T  20583803 catcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcccttaacaacaacaacatcaattaaacatgattctcatcataat 20583704  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  20583703 tcaacaacaacata 20583690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 31501171 - 31501284
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| |||||| | |||| ||||||| | |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  31501171 catcatcaaatcatgactcatgaacacccaagccatgaatcatcaacaacaatatctcataacaacaacaacatcaattaaacatgattctcatcacaat 31501270  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  31501271 tcaacaacaacata 31501284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 9724046 - 9723943
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||    
T  9724046 tcatgatttatgaacacccaagctatgaatcatcaacaataatatctcttaacaacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaa 9723947  T
Q  198 cata 201  Q
    ||||    
T  9723946 cata 9723943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 46474009 - 46474112
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    ||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||    
T  46474009 tcatgatttatgaacactcaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaa 46474108  T
Q  198 cata 201  Q
    ||||    
T  46474109 cata 46474112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 92 - 201
Target Start/End: Original strand, 38424220 - 38424330
Alignment:
Q  92 catcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattca 190  Q
    |||||| ||||||||||||| |||||||   ||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||| ||||||    
T  38424220 catcaaatcatgatttatgaacacccaagtcatgaatcatcaacaacaatatctcttaacaacaacaacatcacttaaacataattctcatcataattca 38424319  T
Q  191 acaacaacata 201  Q
    |||||||||||    
T  38424320 acaacaacata 38424330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 34241437 - 34241324
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||| ||| | ||||||||||||||||||| || |||| ||||| |||||||||||||||||||||||||||| |||    
T  34241437 catcatcaaatcatgatttatgaacactcaagccatgaatcatcaacaacaatgtcacttatcaacaacaacatcaattaaacatgattctcatcataat 34241338  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  34241337 tcaacaacaacata 34241324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 48356642 - 48356755
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||||||| | |||||||||||||||||||||| |||| ||||| ||||||||||| ||||||| |||||||| |||    
T  48356642 catcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcataat 48356741  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  48356742 tcaacaacaacata 48356755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 111 - 201
Target Start/End: Original strand, 45149623 - 45149713
Alignment:
Q  111 acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||  |||||||| ||||    
T  45149623 acacccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgaatctcatcacaaaccaacaacatcata 45149713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 15358795 - 15358908
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| || |||| ||||| ||||||| | |||||||||||||||||| |  ||||||||||| |||||||||||||||||||||| |||||||||    
T  15358795 catcatcaaatcttgatatatgaacacccaagccatgaatcatcaacaacaaaacttcttaacaacaacaacatcaattaaacatgattcccatcacaat 15358894  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  15358895 tcaacaacaacata 15358908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 14935361 - 14935472
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| ||| ||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||   |||||||| ||||| ||||||||||||| |||    
T  14935361 catcaacaaatcatgatttatgaacacccaaaccatgaatcttcaacaacaatatctcttaacaa---caacatcatttaaaaatgattctcatcataat 14935457  T
Q  188 tcaacaacaacatat 202  Q
    |||||||||||||||    
T  14935458 tcaacaacaacatat 14935472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 15362954 - 15363065
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| ||| ||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||   |||||||| ||||| ||||||||||||| |||    
T  15362954 catcaacaaatcatgatttatgaacacccaaaccatgaatcttcaacaacaatatctcttaacaa---caacatcatttaaaaatgattctcatcataat 15363050  T
Q  188 tcaacaacaacatat 202  Q
    |||||||||||||||    
T  15363051 tcaacaacaacatat 15363065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 4446209 - 4446323
Alignment:
Q  88 acatcatcaattcatgatttatga-cacccaaactatgaatcat-caacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcaca 185  Q
    |||||||||||||||||||||||| ||||||| | ||||||||| ||||| ||  |||||||| ||||| ||||||||||||| ||||||||||||||||    
T  4446209 acatcatcaattcatgatttatgaacacccaagccatgaatcattcaacatcagcatctcttatcaacaacaacatcaattaa-catgattctcatcaca 4446307  T
Q  186 attcaacaacaacata 201  Q
    ||||||||||||||||    
T  4446308 attcaacaacaacata 4446323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 91 - 201
Target Start/End: Complemental strand, 16915175 - 16915064
Alignment:
Q  91 tcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattc 189  Q
    ||||||| ||||||||||||| ||||||| | |||||||||||||||||||||  |||| ||||| ||||||||||| ||||||| |||||||| |||||    
T  16915175 tcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatgacttagcaacaacaacatcaattgaacatgaatctcatcataattc 16915076  T
Q  190 aacaacaacata 201  Q
    ||||||||||||    
T  16915075 aacaacaacata 16915064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 9611306 - 9611418
Alignment:
Q  89 catcatcaattcatgatttatgacacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaatt 188  Q
    ||||||||| |||||||||||||   ||||   |||||||||||||||||||||| |||| ||||| ||||||||||| ||||||| |||||||| ||||    
T  9611306 catcatcaaatcatgatttatgaacaccaagtcatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcataatt 9611405  T
Q  189 caacaacaacata 201  Q
    |||||||||||||    
T  9611406 caacaacaacata 9611418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 9838878 - 9838990
Alignment:
Q  89 catcatcaattcatgatttatgacacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaatt 188  Q
    ||||||||| |||||||||||||   ||||   |||||||||||||||||||||| |||| ||||| ||||||||||| ||||||| |||||||| ||||    
T  9838878 catcatcaaatcatgatttatgaacaccaagtcatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcataatt 9838977  T
Q  189 caacaacaacata 201  Q
    |||||||||||||    
T  9838978 caacaacaacata 9838990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 13377527 - 13377640
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||||||| | ||||||||||| |||||| ||  |||| ||||| ||||||||||| ||||||| ||| ||||||||    
T  13377527 catcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacattacttagcaacaacaacatcaattgaacatgaatcttatcacaat 13377626  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  13377627 tcaacaacaacata 13377640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 15368344 - 15368460
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaa--caacaatatctcttaacaacatcaacatcaattaaacatgattctcatcaca 185  Q
    ||||| ||| ||||||||||||| ||||||||| ||||||||||||  | | ||  ||||||||||||| |||||||| ||||||||||||||||||| |    
T  15368344 catcaacaaatcatgatttatgaacacccaaaccatgaatcatcaattctaaaaactctcttaacaacaacaacatcatttaaacatgattctcatcata 15368443  T
Q  186 attcaacaacaacatat 202  Q
    |||||||||||||||||    
T  15368444 attcaacaacaacatat 15368460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 14940751 - 14940866
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaa--caacaatatctcttaacaacatcaacatcaattaaacatgattctcatcaca 185  Q
    ||||| ||| ||||||||||||| ||||||||| ||||||||||||  | | ||  ||||||||||||| |||||||| ||||||||||||||||||| |    
T  14940751 catcaacaaatcatgatttatgaacacccaaaccatgaatcatcaattctaaaaactctcttaacaacaacaacatcatttaaacatgattctcatcata 14940850  T
Q  186 attcaacaacaacata 201  Q
    ||||||||||||||||    
T  14940851 attcaacaacaacata 14940866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 33559694 - 33559758
Alignment:
Q  137 caatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  33559694 caatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacata 33559758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 197
Target Start/End: Complemental strand, 9321275 - 9321176
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    ||||||||| ||| ||||||| ||||||||||| ||||||||||||| ||| ||||| |||||||||||||| || ||||||||||||||||||| ||||    
T  9321275 tcatgatttgtgaacacccaagctatgaatcattaacaacaatatctattatcaacaacaacatcaattaaatataattctcatcacaattcaactacaa 9321176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 16919597 - 16919670
Alignment:
Q  128 catcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||||||||||||  |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||||    
T  16919597 catcaacaacaatattacttagcaacaacaacatcaattaaacacgattcttatcacaattcaacaacaacata 16919670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 13274819 - 13274898
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||||||||| |||||| ||| |||| ||||| ||||||||||| | ||||| ||| ||||||||||||||||||||||    
T  13274819 atgaatcatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacata 13274898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 25124128 - 25124237
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||| ||| ||||||  | |||||||||||||||||| ||||| || ||||| ||||||||||||| ||||| | |||||||||     
T  25124128 catcatcaaatcatgatttgtgaacacccatgccatgaatcatcaacaacaacatctcatatcaacaacaacatcaattaagcatgaat-tcatcacaa- 25124225  T
Q  188 tcaacaacaaca 199  Q
    ||||||||||||    
T  25124226 tcaacaacaaca 25124237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 201
Target Start/End: Complemental strand, 13863156 - 13863066
Alignment:
Q  111 acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||||| | ||| ||||| |||||||||||| |||| ||||| ||||| ||||| ||||||| | | ||||||||||||||||||||||    
T  13863156 acacccaagccatgcatcattaacaacaatatcacttagcaacaacaacaacaattgaacatgaatattatcacaattcaacaacaacata 13863066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 49047898 - 49047810
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||| | |||||| |||| |||||| ||| |||| ||||| ||||||||||| | ||||| ||| ||||||||||||||||||||||    
T  49047898 acccaagccatgaattatcagcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacata 49047810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 14272135 - 14272045
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattct 178  Q
    ||||||| | |||||| |||||| ||| ||| | ||||||||||||||||||||||  ||| ||||| ||||||||||| |||||||||||    
T  14272135 catcatctaatcatgaattatgaacactcaagccatgaatcatcaacaacaatatcatttagcaacaacaacatcaattgaacatgattct 14272045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 8267917 - 8267864
Alignment:
Q  148 aacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||||| || |||||||||||||| ||||||||||||| ||||||||||||||    
T  8267917 aacaacaacatcatcaattaaacataattctcatcacaaatcaacaacaacata 8267864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 8563562 - 8563513
Alignment:
Q  123 tgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacat 172  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||||||||    
T  8563562 tgaatcatcaacaacaacatctcataacaacaacaacatcaattaaacat 8563513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 17224187 - 17224074
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| ||| |||||| ||||||  |||||| | |||||||||||  ||||| ||| |||| ||||| ||||||||||| ||||||| ||| |  |||||    
T  17224187 catcaacaaatcatgaattatgaatacccaagccatgaatcatcattaacaacatcacttagcaacaacaacatcaattgaacatgactcttacaacaat 17224088  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  17224087 tcaacaacaacata 17224074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 28722169 - 28722221
Alignment:
Q  150 caacatcaacatcaattaaacatga-ttctcatcacaattcaacaacaacata 201  Q
    ||||| |||| ||| |||||||||| |||||||||||||||||||||||||||    
T  28722169 caacaacaacttcatttaaacatgaattctcatcacaattcaacaacaacata 28722221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 4438818 - 4438893
Alignment:
Q  88 acatcatcaattcatgatttatg-acacccaaactatgaatca-tcaacaacaatatctcttaacaacatcaacat 161  Q
    ||||||||||||||||||||||| |||||||| | |||||||| |||||| ||  |||||||| ||||| ||||||    
T  4438818 acatcatcaattcatgatttatgaacacccaagccatgaatcattcaacatcagcatctcttatcaacaacaacat 4438893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 12248322 - 12248257
Alignment:
Q  136 acaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||| ||| |||| ||||| ||||||| ||| | ||||| ||| ||||||||||||||||||||||    
T  12248322 acaacatcacttagcaacaacaacatccattgatcatgaatcttatcacaattcaacaacaacata 12248257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 13321047 - 13321119
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaa 194  Q
    |||| ||||||||||||| |||  |||||||||  |||||||||| ||||||| ||  ||| |||||||||||    
T  13321047 atgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaa 13321119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 26070488 - 26070400
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||| | |||||| |||| | |||| ||| |||| ||||| ||||||||||| | |||||  || ||||||||||| ||||||||||    
T  26070488 acccaagccatgaataatcatccacaacatcacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacata 26070400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 26094275 - 26094187
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||| | |||||| |||| | |||| ||| |||| ||||| ||||||||||| | |||||  || ||||||||||| ||||||||||    
T  26094275 acccaagccatgaataatcatccacaacatcacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacata 26094187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 2e-43; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 19854153 - 19854266
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  19854153 catcatcaattcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttagcaacaacaacatcaattaaacatgattctcatcacaat 19854252  T
Q  188 tcaacaacaacata 201  Q
    ||||||| ||||||    
T  19854253 tcaacaataacata 19854266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 34966875 - 34966978
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  34966875 tcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaa 34966974  T
Q  198 cata 201  Q
    ||||    
T  34966975 cata 34966978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 29160542 - 29160439
Alignment:
Q  99 tcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    |||||||||||||  |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||    
T  29160542 tcatgatttatgaatacccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcgcaaatcaacaacaa 29160443  T
Q  198 cata 201  Q
    ||||    
T  29160442 cata 29160439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 18629860 - 18629744
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaaca---tcaattaaacatgattctcatcac 184  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||| |||||   ||||||||||||||||||||||||    
T  18629860 catcatcaaatcatgatttatgaacacccaaaccatgaatcatcaacaacaatatcacttaacaacaacaacaacatcaattaaacatgattctcatcac 18629761  T
Q  185 aattcaacaacaacata 201  Q
    |||||||||| ||||||    
T  18629760 aattcaacaataacata 18629744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 93 - 201
Target Start/End: Original strand, 29605452 - 29605561
Alignment:
Q  93 atcaattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaa 191  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||| ||||| ||||||||||||| |||||||| ||||| |||||||    
T  29605452 atcaattcatgatttatgcacacccaaaccatgaatcatcaacaacaatatttcttagcaacaacaacatcaattaagcatgattcacatcataattcaa 29605551  T
Q  192 caacaacata 201  Q
    ||||||||||    
T  29605552 caacaacata 29605561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 22362014 - 22361901
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||||||||||| |||||| ||||||| | |||||||||||||||||||||| |||| ||||| ||||||||||| ||||||| | ||||||||||    
T  22362014 catcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatttcatcacaat 22361915  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  22361914 tcaacaacaacata 22361901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 33538618 - 33538505
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||| ||| | |||||||||||||||||||||| |||| ||| | ||||||||||||||||||||||||||||||||    
T  33538618 catcatcaaatcatgatttatgaacactcaagccatgaatcatcaacaacaatatcacttagcaataacaacatcaattaaacatgattctcatcacaat 33538519  T
Q  188 tcaacaacaacata 201  Q
    ||||||| ||||||    
T  33538518 tcaacaataacata 33538505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 23221922 - 23222027
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctctta--acaacatcaacatcaattaaacatgattctcatcacaattcaacaac 195  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||  |||||| ||| ||||||||||||||| ||||||||||| ||||||||    
T  23221922 tcatgatttatgaacacccaatctatgaatcatcaacaacaatatctcttataacaacaacaatatcaattaaacatgaatctcatcacaaatcaacaac 23222021  T
Q  196 aacata 201  Q
    ||||||    
T  23222022 aacata 23222027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 25651235 - 25651348
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||| | ||||||||||||| ||||||| | |||||||||||||||||||||| |||| ||||| ||||||||||| ||||||| |||||||| |||    
T  25651235 catcatccaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcataat 25651334  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  25651335 tcaacaacaacata 25651348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 22462322 - 22462247
Alignment:
Q  111 acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaa 186  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||    
T  22462322 acacccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcatttaaacatgaatctcatcacaa 22462247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 23222755 - 23222862
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaaca--atatctctta--acaacatcaacatcaattaaacatgattctcatcacaattcaaca 193  Q
    ||||||||||||| ||||||| |||||||||||||||||||  ||||||||||  |||||| ||||||||||||||||||| ||||||||||| | ||||    
T  23222755 tcatgatttatgaacacccaatctatgaatcatcaacaacatgatatctcttataacaacaacaacatcaattaaacatgaatctcatcacaaataaaca 23222854  T
Q  194 acaacata 201  Q
    ||||||||    
T  23222855 acaacata 23222862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 201
Target Start/End: Original strand, 18398942 - 18399049
Alignment:
Q  95 caattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaaca 193  Q
    |||||||||| ||||| |||||||| | |||||| |||| |||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||||||||||||    
T  18398942 caattcatgaattatgcacacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaaca 18399041  T
Q  194 acaacata 201  Q
    ||||||||    
T  18399042 acaacata 18399049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 17557255 - 17557152
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    ||||||||||||| |||| ||||||||||| || |||||||||||   ||| ||||| |||||||||||||| |||||| | ||||||||||||||||||    
T  17557255 tcatgatttatgaacacctaaactatgaatgattaacaacaatattagttagcaacaacaacatcaattaaatatgattataatcacaattcaacaacaa 17557156  T
Q  198 cata 201  Q
    ||||    
T  17557155 cata 17557152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 89 - 199
Target Start/End: Complemental strand, 18381932 - 18381821
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| ||| |||||| ||||||  |||||| | |||||||||||||||||| ||| |||| ||||| ||||||||||| ||||||| ||| ||||||||    
T  18381932 catcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttatcacaat 18381833  T
Q  188 tcaacaacaaca 199  Q
    ||||||||||||    
T  18381832 tcaacaacaaca 18381821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 17013857 - 17013775
Alignment:
Q  120 ctatgaatcatcaacaacaatatctcttaacaacatcaa-catcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||||||||||||||||||||| |||||| |||| ||| |||||||||||||||| ||||||||||| ||||||| ||||||    
T  17013857 ctatgaatcatcaacaacaatatttcttaataacaacaatcatcaattaaacatgaatctcatcacaaatcaacaagaacata 17013775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 35009702 - 35009590
Alignment:
Q  89 catcatcaattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||||||||||| | ||| | |||||| | |||| ||||||||||||| |||  ||||||||| ||||||||||| |||||| ||||||||| |||    
T  35009702 catcatcaattcatgaat-atgcatacccaagcaatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataat 35009604  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  35009603 tcaacaacaacata 35009590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 25919611 - 25919725
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| ||| |||||| ||||||  |||||| | |||||||||||||||||| |||   || ||||| ||||||||||| |||||| ||||||||| |||    
T  25919611 catcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcatatagcaacaacaacatcaattgaacatggttctcatcataat 25919710  T
Q  188 tcaacaacaacatat 202  Q
    |||||||||||||||    
T  25919711 tcaacaacaacatat 25919725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 25367486 - 25367373
Alignment:
Q  89 catcatcaattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| |||||||||| | ||| |||||||| | |||||| ||| | ||||| ||| |||| ||||| ||||||||||| ||||||| ||| ||||||||    
T  25367486 catcaacaattcatgaatcatgcacacccaagccatgaattatcgataacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaat 25367387  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  25367386 tcaacaacaacata 25367373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 32352105 - 32352158
Alignment:
Q  148 aacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  32352105 aacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacata 32352158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 33324691 - 33324800
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| |||||||||| ||||||  |||||| | |||||||||||||||||| ||| |||| ||| | ||||||||||| |||||| ||||||||| |||    
T  33324691 catcaccaattcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaataacaacatcaattgaacatggttctcatcataat 33324790  T
Q  188 tcaacaacaa 197  Q
    ||||| ||||    
T  33324791 tcaaccacaa 33324800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 35136261 - 35136152
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| |||||||||| ||||||  |||||| | |||||||||||||||||| ||| |||| ||| | ||||||||||| |||||| ||||||||| |||    
T  35136261 catcaccaattcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaataacaacatcaattgaacatggttctcatcataat 35136162  T
Q  188 tcaacaacaa 197  Q
    ||||| ||||    
T  35136161 tcaaccacaa 35136152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 197
Target Start/End: Complemental strand, 15079932 - 15079848
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    |||||||| |||||||||||||||||| ||| |||| ||| | ||| ||||||| |||||| ||||||||| |||||||||||||    
T  15079932 acccaaaccatgaatcatcaacaacaacatcacttagcaataacaatatcaattgaacatggttctcatcataattcaacaacaa 15079848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 17083384 - 17083333
Alignment:
Q  150 caacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  17083384 caacaacaacatcaattaaacatgaatctcatcacaattcaacaacaacata 17083333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 19672293 - 19672390
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||||||||||||||||| |||| ||  ||||||||||||||||||||||||||         ||||||||||||||||||| ||||||| ||||    
T  19672293 catcatcaattcatgatttatgaacaccgaagttatgaatcatcaacaacaatatctct--------acaacatcaattaaacatga-tctcatcgcaat 19672383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 21623191 - 21623279
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||| | |||| |||| |||| ||| ||| |||| ||||| ||||||||||  ||||||||||| | ||||||||||||||||||||    
T  21623191 acccaagccatgactcattaacatcaacatcacttagcaacaacaacatcaatagaacatgattcttaccacaattcaacaacaacata 21623279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 15740227 - 15740341
Alignment:
Q  89 catcatcaattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| |||||||||| | ||| |||||||||| |||||| || || ||||  |||  ||||||||||| ||||||||| ||||||| |||||  | |||    
T  15740227 catcaacaattcatgaatcatgcacacccaaaccatgaattattaataacatcatcatttaacaacatctacatcaattgaacatgaatctcagtataat 15740326  T
Q  188 tcaacaacaacatat 202  Q
    |||||| ||||||||    
T  15740327 tcaacatcaacatat 15740341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 16888041 - 16887928
Alignment:
Q  89 catcatcaattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| |||||||||| ||||| | |||||| | ||||||||| ||||| || ||| | ||   ||| ||| ||||||| |||||| ||||||||| |||    
T  16888041 catcaccaattcatgaattatgtatacccaagccatgaatcattaacaataacatcacatagtgacaacaaaatcaattgaacatggttctcatcataat 16887942  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  16887941 tcaacaacaacata 16887928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 200
Target Start/End: Original strand, 19629365 - 19629441
Alignment:
Q  125 aatcatcaacaacaatatctcttaacaacatcaacatcaattaaa-catgattctcatcacaattcaacaacaacat 200  Q
    |||||| |||||||| || ||| | ||||| |||||||||||||| | ||||||||| | |||||||||||||||||    
T  19629365 aatcataaacaacaacatgtctcagcaacaacaacatcaattaaatcttgattctcacctcaattcaacaacaacat 19629441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 17083426 - 17083376
Alignment:
Q  90 atcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaa 139  Q
    |||||||| ||||||||||||| ||||||| | ||||||||||||||||||    
T  17083426 atcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaa 17083376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 22848081 - 22848126
Alignment:
Q  156 caacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||||||||||| ||| |||| ||||| |||||||||||||||||    
T  22848081 caacatcaattaagcattattcccatcataattcaacaacaacata 22848126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 32276984 - 32276908
Alignment:
Q  125 aatcatcaacaacaatatctcttaacaacatcaacatcaatt-aaacatgattctcatcacaattcaacaacaacat 200  Q
    |||||| |||||||| || ||| | ||||| ||||||||||| |||| ||||||||| | ||||||||||| |||||    
T  32276984 aatcataaacaacaacatatctcagcaacaacaacatcaattgaaacttgattctcacctcaattcaacaataacat 32276908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 3e-42; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 18238396 - 18238293
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18238396 tcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaa 18238297  T
Q  198 cata 201  Q
    ||||    
T  18238296 cata 18238293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 41256618 - 41256508
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  41256618 catcatcaaatcatgatttatgaacacccaaaccatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatggttctcatcacaat 41256519  T
Q  188 tcaacaacaac 198  Q
    |||||||||||    
T  41256518 tcaacaacaac 41256508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 99 - 199
Target Start/End: Complemental strand, 50220179 - 50220078
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  50220179 tcatgatttatgaacacccaaactatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaa 50220080  T
Q  198 ca 199  Q
    ||    
T  50220079 ca 50220078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 15013531 - 15013421
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  15013531 catcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttaacaacaacaatatcaattaaacatgattctcatcacaat 15013432  T
Q  188 tcaacaacaac 198  Q
    |||||||||||    
T  15013431 tcaacaacaac 15013421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 54398388 - 54398494
Alignment:
Q  96 aattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaa 194  Q
    |||||||||||||| | ||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  54398388 aattcatgatttataaacacccaagccatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaa 54398487  T
Q  195 caacata 201  Q
    |||||||    
T  54398488 caacata 54398494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 13590313 - 13590210
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||    
T  13590313 tcatgatttatgaacacccaagctatgaatcatcaacaataatatctcttaacaacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaa 13590214  T
Q  198 cata 201  Q
    ||||    
T  13590213 cata 13590210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 13442928 - 13442812
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaaca---tcaattaaacatgattctcatcac 184  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||||||||| |||||||||||||| |||||   ||||||||||||||||||||||||    
T  13442928 catcatcaattcataatttatgaacacccaagctatgaatcatcaacaacaaaatctcttaacaacaacaacaacatcaattaaacatgattctcatcac 13442829  T
Q  185 aattcaacaacaacata 201  Q
    |||||||||| ||||||    
T  13442828 aattcaacaataacata 13442812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 7186093 - 7185980
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||| | ||||||| | ||||||||||||||| ||||||||||| ||||| ||||||||||||||||||| ||||||||||||    
T  7186093 catcatcaaatcatgatttataaacacccaagccatgaatcatcaacaataatatctcttagcaacaacaacatcaattaaacatgaatctcatcacaat 7185994  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  7185993 tcaacaacaacata 7185980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 41916941 - 41916862
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  41916941 atgaatcatcaacaacaatatctcttaacaacaacaacatcagttaaacatgattctcatcacaattcaacaacaacata 41916862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 7964960 - 7964847
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||| ||| | |||||||||||||||||||||| |||| ||||| ||| |||||||||||||||||||||||| |||    
T  7964960 catcatcaaatcatgatttatgaacactcaagccatgaatcatcaacaacaatatcacttagcaacaacaaaatcaattaaacatgattctcatcataat 7964861  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  7964860 tcaacaacaacata 7964847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 40905182 - 40905070
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||||||| | | || |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  40905182 catcatcaaatcatgatttatgaacacccaagccacgagtcatcaacaacaatatctcttagcaacaacaacatcaattaa-catgattctcatcacaat 40905084  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  40905083 tcaacaacaacata 40905070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 201 - 277
Target Start/End: Original strand, 18335452 - 18335528
Alignment:
Q  201 ataatcccctaaaacaggtatgaaagctataattgtaaaccaggatcaaatctatggaagcattggtttatacattc 277  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18335452 ataatcccccaaaacaggtatgaaagctataattgtaaaccacgatcaaatctatggaagcattggtttatacattc 18335528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 89 - 200
Target Start/End: Original strand, 38764707 - 38764819
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||| |||| ||||||||||||| ||||||| | |||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||| |||    
T  38764707 catcttcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatattccttaacaacaacaacatcaattaaacatgattctcatcataat 38764806  T
Q  188 tcaacaacaacat 200  Q
    | |||||||||||    
T  38764807 tgaacaacaacat 38764819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 15044826 - 15044939
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||||||| | ||||||||||| |||||| ||| |||| ||||| ||||||||||| ||||||| ||| ||||||||    
T  15044826 catcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaat 15044925  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  15044926 tcaacaacaacata 15044939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 200
Target Start/End: Complemental strand, 52265758 - 52265645
Alignment:
Q  88 acatcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaa 186  Q
    |||||||||| |||||| |||||| ||||||| | |||||||||||||| ||||||| |||| ||||| ||||||||||| ||||||| ||| |||||||    
T  52265758 acatcatcaaatcatgaattatgaacacccaagccatgaatcatcaacatcaatatcacttagcaacaacaacatcaattgaacatgaatcttatcacaa 52265659  T
Q  187 ttcaacaacaacat 200  Q
    ||||||||||||||    
T  52265658 ttcaacaacaacat 52265645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 15109598 - 15109485
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||||||| | ||||||||||| |||||| ||  |||| ||||| ||||||||||| ||||||| ||| ||||||||    
T  15109598 catcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacattacttagcaacaacaacatcaattgaacatgaatcttatcacaat 15109499  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  15109498 tcaacaacaacata 15109485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 18276432 - 18276541
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||| |||| ||||||||||||| ||||||| | || ||||||||||||||||||| |||  ||||| ||||||||||| ||||||| ||||||||||||    
T  18276432 catcgtcaaatcatgatttatgaacacccaagccatcaatcatcaacaacaatatcactttgcaacaacaacatcaattgaacatgaatctcatcacaat 18276531  T
Q  188 tcaacaacaa 197  Q
    ||||||||||    
T  18276532 tcaacaacaa 18276541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 47468535 - 47468484
Alignment:
Q  150 caacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  47468535 caacaacaacatcaattaaacatgattctcatcacaattcaacaacaacata 47468484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 19822025 - 19821911
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| ||| |||||| ||||||  |||||| | |||||||||||||||||| ||| | || ||||| ||||||||||| |||||| ||||||||| |||    
T  19822025 catcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacatagcaacaacaacatcaattgaacatggttctcatcataat 19821926  T
Q  188 tcaacaacaacatat 202  Q
    ||||||| |||||||    
T  19821925 tcaacaataacatat 19821911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 14901230 - 14901344
Alignment:
Q  89 catcatcaattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||||||||||| ||||| |||||||    |||||||||||||||||  ||| |||| ||||| ||||||||||| || |||||||| | ||||||    
T  14901230 catcatcaattcatgaattatgcacacccatgtcatgaatcatcaacaacagcatcacttagcaacaacaacatcaattgaatatgattcttaccacaat 14901329  T
Q  188 tcaacaacaacatat 202  Q
    |||| || |||||||    
T  14901330 tcaataataacatat 14901344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 197
Target Start/End: Original strand, 27960994 - 27961078
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    |||||||| |||||| |||| |||||| ||| |||||||||| ||||||||||| | ||||| ||| || |||||||||||||||    
T  27960994 acccaaaccatgaattatcatcaacaacatcacttaacaacaacaacatcaattgatcatgaatcttataacaattcaacaacaa 27961078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 41166170 - 41166082
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||| | |||| ||||||||||||| ||| |||| ||||| ||||||||||| ||||||| |||   ||||||||||||||||||||    
T  41166170 acccaagccatgattcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttgccacaattcaacaacaacata 41166082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 139
Target Start/End: Complemental strand, 47468579 - 47468527
Alignment:
Q  88 acatcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaa 139  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||    
T  47468579 acatcatcaactcatgatttatgaacacccaagctatgaatcatcaacaacaa 47468527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 13809725 - 13809646
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||| |||| |||||| |||  ||| ||||| ||||||||||| | ||||| ||| ||||||||||||||||||||||    
T  13809725 atgaattatcatcaacaacatcaattagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacata 13809646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 15675352 - 15675243
Alignment:
Q  89 catcatcaattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||||||||||| | ||| | |||||| | |||| ||||||||||||| |||  |||||||||  |||||||||| ||||||| ||  ||| ||||    
T  15675352 catcatcaattcatgaat-atgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaat 15675254  T
Q  188 tcaacaacaac 198  Q
    |||||||||||    
T  15675253 tcaacaacaac 15675243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 23270158 - 23270072
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaaca 199  Q
    |||||| | |||||| |||| |||||| ||  |||||||||| ||||||||||| | |||||| || ||||||||||| ||||||||    
T  23270158 acccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaattgatcatgatacttatcacaattcatcaacaaca 23270072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 31115629 - 31115738
Alignment:
Q  89 catcatcaattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||||||||||| | ||| | |||||| | |||| ||||||||||||| |||  |||||||||  |||||||||| ||||||| ||  ||| ||||    
T  31115629 catcatcaattcatgaat-atgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaat 31115727  T
Q  188 tcaacaacaac 198  Q
    |||||||||||    
T  31115728 tcaacaacaac 31115738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 200
Target Start/End: Original strand, 14996162 - 14996238
Alignment:
Q  125 aatcatcaacaacaatatctcttaacaacatcaacatcaattaaa-catgattctcatcacaattcaacaacaacat 200  Q
    |||||| |||||||| || ||| | ||||| |||||||||||||| | ||||||||| | |||||||||||||||||    
T  14996162 aatcataaacaacaacatgtctcagcaacaacaacatcaattaaaacttgattctcacctcaattcaacaacaacat 14996238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 19697593 - 19697517
Alignment:
Q  125 aatcatcaacaacaatatctcttaacaacatcaacatcaattaaa-catgattctcatcacaattcaacaacaacat 200  Q
    |||||| |||||||| || ||| | ||||| |||||||||||||| | ||||||||| | |||||||||||||||||    
T  19697593 aatcataaacaacaacatgtctcagcaacaacaacatcaattaaaacttgattctcacctcaattcaacaacaacat 19697517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 19708178 - 19708102
Alignment:
Q  125 aatcatcaacaacaatatctcttaacaacatcaacatcaattaaa-catgattctcatcacaattcaacaacaacat 200  Q
    |||||| |||||||| || ||| | ||||| |||||||||||||| | ||||||||| | |||||||||||||||||    
T  19708178 aatcataaacaacaacatgtctcagcaacaacaacatcaattaaaacttgattctcacctcaattcaacaacaacat 19708102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 47535252 - 47535201
Alignment:
Q  150 caacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||| |||| |||||| ||||||||||| |||| |||||||||||||||||    
T  47535252 caacaacaacgtcaattgaacatgattcttatcataattcaacaacaacata 47535201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 3e-42; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 9636753 - 9636856
Alignment:
Q  99 tcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9636753 tcatgatttatgaatacccaaactatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaa 9636852  T
Q  198 cata 201  Q
    ||||    
T  9636853 cata 9636856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 24277758 - 24277872
Alignment:
Q  88 acatcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaa 186  Q
    |||||||||| |||||||||||||  |||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  24277758 acatcatcaaatcatgatttatgagtacccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcatttaaacatgattctcatcacaa 24277857  T
Q  187 ttcaacaacaacata 201  Q
    |||||||||||||||    
T  24277858 ttcaacaacaacata 24277872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 6094724 - 6094827
Alignment:
Q  99 tcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    |||||||||||||  |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  6094724 tcatgatttatgaatacccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaa 6094823  T
Q  198 cata 201  Q
    ||||    
T  6094824 cata 6094827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 91 - 201
Target Start/End: Original strand, 24884686 - 24884797
Alignment:
Q  91 tcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattc 189  Q
    ||||||| ||||||||||||| |||||||   ||||||||||||||||||||||| ||| ||||| ||||||||||||||||||| ||||||||||||||    
T  24884686 tcatcaaatcatgatttatgaacacccaagtcatgaatcatcaacaacaatatctattagcaacaacaacatcaattaaacatgaatctcatcacaattc 24884785  T
Q  190 aacaacaacata 201  Q
    ||||| ||||||    
T  24884786 aacaataacata 24884797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 111 - 201
Target Start/End: Complemental strand, 24560957 - 24560867
Alignment:
Q  111 acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| |||| |||||||||||||||    
T  24560957 acacccaagctatgaatcatcaacaacaatatctcataacaacaacaacatcaattaaacatgaatctcaccacatttcaacaacaacata 24560867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 112 - 200
Target Start/End: Original strand, 33128067 - 33128155
Alignment:
Q  112 cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacat 200  Q
    ||||||| | ||||||||| ||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  33128067 cacccaagccatgaatcattaacaacaatatctcttaaccacaacaatatcaattaaacatgattctcatcacaattcaacaacaacat 33128155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 23821855 - 23821741
Alignment:
Q  88 acatcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaa 186  Q
    |||||||||| |||||| |||||| ||||||  | |||||||||||||||||||||| |||| ||||| ||||||||||| ||||||| |||||||| ||    
T  23821855 acatcatcaaatcatgaattatgaacacccatgccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcataa 23821756  T
Q  187 ttcaacaacaacata 201  Q
    |||||||| ||||||    
T  23821755 ttcaacaataacata 23821741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 23830934 - 23830820
Alignment:
Q  88 acatcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaa 186  Q
    |||||||||| |||||| |||||| ||||||  | |||||||||||||||||||||| |||| ||||| ||||||||||| ||||||| |||||||| ||    
T  23830934 acatcatcaaatcatgaattatgaacacccatgccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcataa 23830835  T
Q  187 ttcaacaacaacata 201  Q
    |||||||| ||||||    
T  23830834 ttcaacaataacata 23830820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 19433581 - 19433468
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| ||| |||||| |||||| ||||||| | ||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| |  |||||    
T  19433581 catcaacaaatcatgaattatgaacacccaagccatgaatcatcaacaacaatatctcttagcaacaacaacatcaattgaacatgattcttacaacaat 19433482  T
Q  188 tcaacaacaacata 201  Q
    |||| |||||||||    
T  19433481 tcaataacaacata 19433468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 67990 - 68103
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| |||||| |||||| ||| ||| | |||||||| ||||||||||||| |||| ||||| ||||||||||| ||||||| ||| | ||||||    
T  67990 catcatcaaatcatgaattatgaacacgcaagccatgaatcaccaacaacaatatcacttagcaacaacaacatcaattgaacatgaatcttaccacaat 68089  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  68090 tcaacaacaacata 68103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 201
Target Start/End: Original strand, 25595044 - 25595131
Alignment:
Q  111 acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||||| |||||||||||||||||   | ||||||||||||| ||||||||||||||||||| ||||||||||| |||| |||||||||    
T  25595044 acacccaagctatgaatcatcaacaa---tctctcttaacaacaacaacatcaattaaacatgaatctcatcacaaatcaaaaacaacata 25595131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 18536780 - 18536866
Alignment:
Q  115 ccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||| ||||||||||||||||||| |||||| | || ||| ||||||||||||||||||| ||||| |||| |||||||||||||||    
T  18536780 ccaagctatgaatcatcaacaacagtatctcatgacgacaacaacatcaattaaacatgaatctcaccacatttcaacaacaacata 18536866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 19669358 - 19669244
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||| ||||||| ||||||  |||||| | ||||||||||||||| || ||| |||| ||||| ||||||||||| |||||| ||| ||||| |||    
T  19669358 catcatcagttcatgaattatgaatacccaagccatgaatcatcaacaataacatcacttagcaacaacaacatcaattgaacatggttcacatcataat 19669259  T
Q  188 tcaacaacaacatat 202  Q
    |||||||||||||||    
T  19669258 tcaacaacaacatat 19669244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 19666526 - 19666639
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||||  ||||| ||||||  |||||| | ||||||||||||| |||||||| |||| ||||| ||||||||||| |||||| ||||||||| |||    
T  19666526 catcatcaaaacatgaattatgaatacccaagccatgaatcatcaacgacaatatcacttagcaacaacaacatcaattgaacatggttctcatcataat 19666625  T
Q  188 tcaacaacaacata 201  Q
    |||| |||||||||    
T  19666626 tcaataacaacata 19666639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 16292999 - 16292937
Alignment:
Q  139 atatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||||||| ||||||||||||||    
T  16292999 atatctcttaataacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaacata 16292937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 22138158 - 22138271
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||||||||||| ||||||  ||||||   || ||||| ||||||||||||| |||| ||||| |||||||||||||||||| ||||| ||| |||    
T  22138158 catcatcaattcatgaattatgaatacccaagtcataaatcaccaacaacaatatcacttagcaacaacaacatcaattaaacatggttctcttcataat 22138257  T
Q  188 tcaacaacaacata 201  Q
    |||| |||| ||||    
T  22138258 tcaaaaacatcata 22138271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 25265653 - 25265541
Alignment:
Q  89 catcatcaattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||||||||||| | ||| | |||||| | |||| |||| |||||||| |||  ||||||||| ||||||||||| |||||| ||||||||| |||    
T  25265653 catcatcaattcatgaat-atgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataat 25265555  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  25265554 tcaacaacaacata 25265541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 43645925 - 43646004
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||||||| ||||||| ||| |||| ||||| ||||||||||| ||||||||||| | |||| |||||||||||||||    
T  43645925 atgaatcatcgacaacaacatcacttagcaacaacaacatcaattgaacatgattcttaccacagttcaacaacaacata 43646004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 99 - 202
Target Start/End: Complemental strand, 28031486 - 28031381
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaatt-aaacatgattctcatcacaattcaacaaca 196  Q
    ||||||| ||||| ||||||| | || |||||| |||||||| || ||| ||||||| ||||||||||| |||| ||||||||| | |||||||||||||    
T  28031486 tcatgatatatgaacacccaagccataaatcataaacaacaacatatctcaacaacaacaacatcaattgaaacttgattctcacctcaattcaacaaca 28031387  T
Q  197 acatat 202  Q
    ||||||    
T  28031386 acatat 28031381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 24294738 - 24294658
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacatat 202  Q
    ||||||||||| |||||  ||| |||| ||||| ||||||||||| ||||||| ||||| || ||||||||| ||||||||    
T  24294738 atgaatcatcatcaacatcatcacttagcaacaacaacatcaattgaacatgaatctcagcataattcaacatcaacatat 24294658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 25305477 - 25305549
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaa 194  Q
    |||||||||||||||||| ||| |||| | ||| ||||||||||| ||||||| ||| | |||||||||||||    
T  25305477 atgaatcatcaacaacaacatcacttagccacaacaacatcaattgaacatgactcttaccacaattcaacaa 25305549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 3480 - 3404
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatga 174  Q
    |||||| |||||| ||||||| | ||||||||||| |||||| ||| |||| ||||| ||||||||||| |||||||    
T  3480 tcatgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatga 3404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 24571500 - 24571428
Alignment:
Q  129 atcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||| |||||| ||| |||||||||| ||||||||||| | ||||| ||| | ||||||||||||| ||||||    
T  24571500 atcatcaacaacatcacttaacaacaacaacatcaattgatcatgaatcttaacacaattcaacaaaaacata 24571428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 271193 - 271279
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaaca 199  Q
    |||||| |||||||| |||| |||||| ||  | || ||||| ||||||||||| | |||||  || ||||||||||||||||||||    
T  271193 acccaagctatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaaca 271279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 36982704 - 36982595
Alignment:
Q  89 catcatcaattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||||||||||| | ||| | |||||||| |||| ||||||||||||| |||  |||||||||  |||||||||| |||| || ||  | | ||||    
T  36982704 catcatcaattcatgaat-atgcatacccaaacaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacaggaatcataactcaat 36982606  T
Q  188 tcaacaacaac 198  Q
    |||||||||||    
T  36982605 tcaacaacaac 36982595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 3249 - 3362
Alignment:
Q  88 acatcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaa 186  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  3249 acatcatcaactcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgatt-tcatcacaa 3347  T
Q  187 ttcaacaacaacata 201  Q
    |||||||||||||||    
T  3348 ttcaacaacaacata 3362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 88 - 197
Target Start/End: Original strand, 27494 - 27604
Alignment:
Q  88 acatcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaa 186  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  27494 acatcatcaactcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttaacaacaacatcatcaattaaacatgattctcatcacaa 27593  T
Q  187 ttcaacaacaa 197  Q
    |||||||||||    
T  27594 ttcaacaacaa 27604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 86354 - 86468
Alignment:
Q  88 acatcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaa 186  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  86354 acatcatcaaatcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttaacaacaaaaacatcaattaaacatgattatcatcacaa 86453  T
Q  187 ttcaacaacaacata 201  Q
    || ||| | ||||||    
T  86454 ttgaactataacata 86468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 37556 - 37669
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||    
T  37556 catcatcaattcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcgtctcaat 37655  T
Q  188 tcaacaacaacata 201  Q
    ||||||| ||||||    
T  37656 tcaacaataacata 37669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 5e-41; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 41661563 - 41661676
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  41661563 catcatcaattcatgatttatgaacactcaagctatgaatcatcaacaacaatatctctcaacaacaacaacatcaattaaacatgattctcatcacaat 41661662  T
Q  188 tcaacaacaacata 201  Q
    ||||||| ||||||    
T  41661663 tcaacaataacata 41661676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 116 - 202
Target Start/End: Original strand, 50313213 - 50313299
Alignment:
Q  116 caaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacatat 202  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  50313213 caaactatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattcccatcacaattcaacaacaacatat 50313299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 12952962 - 12953075
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||||||| | ||||||||||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||||    
T  12952962 catcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttagcaacaacaacatcaattaaacataaatctcatcacaat 12953061  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  12953062 tcaacaacaacata 12953075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 99 - 202
Target Start/End: Complemental strand, 31412572 - 31412468
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    ||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||    
T  31412572 tcatgatttatgaacactcaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacctaattctcatcacaattcaacaacaa 31412473  T
Q  198 catat 202  Q
    |||||    
T  31412472 catat 31412468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 1990800 - 1990914
Alignment:
Q  89 catcatcaattcatgatttatgac--acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaa 186  Q
    ||||||||| |||||||||||||   | |||| | ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||     
T  1990800 catcatcaaatcatgatttatgaacaaaccaagccatgaatcatcaacaacaatatctcttaacaacaacaacatcatttaaacatgattctcatcacag 1990899  T
Q  187 ttcaacaacaacata 201  Q
    |||||||||||||||    
T  1990900 ttcaacaacaacata 1990914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 14814980 - 14814901
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  14814980 atgaaacatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattcttatcacaattcaacaacaacata 14814901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 6228874 - 6228761
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||||||| | ||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| | ||||| |||    
T  6228874 catcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatttcttagcaacaacaacatcaattaaacatgatccacatcataat 6228775  T
Q  188 tcaacaacaacata 201  Q
    || |||||||||||    
T  6228774 tcgacaacaacata 6228761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 33369157 - 33369044
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| |||||||   ||||||| |||||||||||||  ||||||||||  ||||||||||||||||||||||||||| |||    
T  33369157 catcatcaaatcatgatttatgaacacccaagtcatgaatcgtcaacaacaatattccttaacaacaaaaacatcaattaaacatgattctcatcataat 33369058  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  33369057 tcaacaacaacata 33369044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 43427753 - 43427652
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    ||||||||||||| |||| || ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  43427753 tcatgatttatgaacaccaaagctatgaatcatcaacaacaatatctc--aacaacaacaacatcaattaatcatgattctcatcacaactcaacaacaa 43427656  T
Q  198 cata 201  Q
    ||||    
T  43427655 cata 43427652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 4162454 - 4162341
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||||||| | ||||||||||||||||||||  ||||| ||||| |||||||||||||||||||||| | |||  ||    
T  4162454 catcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatagttcttagcaacaacaacatcaattaaacatgattcacgtcatcat 4162355  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  4162354 tcaacaacaacata 4162341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 11638356 - 11638468
Alignment:
Q  90 atcatcaattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaatt 188  Q
    ||||||||||||||||||||  | ||| |  |||||||||||||||| |||||||||| || |||| ||||||||||||||||||| ||||||||||| |    
T  11638356 atcatcaattcatgatttatacatacctaggctatgaatcatcaacaccaatatctctgaataacaacaacatcaattaaacatgaatctcatcacaaat 11638455  T
Q  189 caacaacaacata 201  Q
    |||||||||||||    
T  11638456 caacaacaacata 11638468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 11061256 - 11061142
Alignment:
Q  88 acatcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaa 186  Q
    |||||||||| |||||| |||||| ||||||| | |||||||||||||||||||||| |||| || || ||||||||||| ||||||| | | |||||||    
T  11061256 acatcatcaaatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaccaacaacatcaattgaacatgactattatcacaa 11061157  T
Q  187 ttcaacaacaacata 201  Q
    |||||||||||||||    
T  11061156 ttcaacaacaacata 11061142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 111 - 201
Target Start/End: Complemental strand, 38375904 - 38375814
Alignment:
Q  111 acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||||| ||||||||||||||||||| |||||| | |||||| ||||||||||||||||||| ||||| |||| |||||||||||||||    
T  38375904 acacccaagctatgaatcatcaacaacagtatctcatgacaacaacaacatcaattaaacatgaatctcaccacatttcaacaacaacata 38375814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 9591003 - 9590890
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||  ||||| |||||||   |||||||||||||||||||||| |||||||||| ||||||||||| |||||| ||||||||| ||     
T  9591003 catcatcaaatcatgaactatgaacacccaagtcatgaatcatcaacaacaatatcacttaacaacaacaacatcaattgaacatggttctcatcagaac 9590904  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  9590903 tcaacaacaacata 9590890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 3576687 - 3576574
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| ||| |||||| |||||| ||||||| | ||||||||||||| |||||||  |||| ||||| |||||||||| |||||||| ||| ||||||||    
T  3576687 catcaacaaatcatgaattatgaacacccaagccatgaatcatcaaccacaatattacttagcaacaacaacatcaatcaaacatgactcttatcacaat 3576588  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  3576587 tcaacaacaacata 3576574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 17191539 - 17191652
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| ||| |||||| |||||| ||| ||| | |||||||||||||||||| ||  |||| ||||| ||||||||||||||||||||||| ||||||||    
T  17191539 catcaacaaatcatgaattatgaacactcaagccatgaatcatcaacaacaacattacttagcaacagcaacatcaattaaacatgattcttatcacaat 17191638  T
Q  188 tcaacaacaacata 201  Q
    ||| ||||||||||    
T  17191639 tcagcaacaacata 17191652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 34559897 - 34560010
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| | ||||||||||| ||| ||| | |||||||||||||||||||||| |||| ||||| ||||||||||  ||||||| |||||||| |||    
T  34559897 catcatcaaattatgatttatgaacactcaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaatcgaacatgaatctcatcataat 34559996  T
Q  188 tcaacaacaacata 201  Q
    |||||||| |||||    
T  34559997 tcaacaactacata 34560010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 89 - 199
Target Start/End: Complemental strand, 51961386 - 51961277
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||| ||| ||||||||| |||||||||||||||||| ||||| || ||||| ||||||||||||| ||||| | |||||||||     
T  51961386 catcatcaaatcatgatttgtgaacacccaaaccatgaatcatcaacaacaacatctcatatcaacaacaacatcaattaagcatgaat-tcatcacaa- 51961289  T
Q  188 tcaacaacaaca 199  Q
    ||||||||||||    
T  51961288 tcaacaacaaca 51961277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 111 - 201
Target Start/End: Original strand, 10912906 - 10912996
Alignment:
Q  111 acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||||| || ||||||||||||| ||||||||| | |||||| ||||||||||||||||||| ||||| |||| |||||| ||||||||    
T  10912906 acacccaagctgtgaatcatcaacatcaatatctcatgacaacaacaacatcaattaaacatgaatctcaccacatttcaaccacaacata 10912996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 111 - 197
Target Start/End: Original strand, 17204721 - 17204807
Alignment:
Q  111 acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    |||||||| | |||||||||||||||||||||  |||| ||||| ||||||| ||||||||||||||  ||||||||||||||||||    
T  17204721 acacccaagccatgaatcatcaacaacaatattacttagcaacaacaacatccattaaacatgattcctatcacaattcaacaacaa 17204807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 39656524 - 39656637
Alignment:
Q  89 catcatcaattcatgatttatgacaccc-aaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| |||||| ||||||  ||| |||| |||||||||||||||||||||| |||| ||||| | ||||||||| ||||||| ||| |  |||||    
T  39656524 catcatcaaatcatgaattatgaacccctaaaccatgaatcatcaacaacaatatcacttagcaacaaccacatcaattgaacatgaatcttacaacaat 39656623  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  39656624 tcaacaacaacata 39656637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 12488975 - 12488862
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||| || |||||| |||||| ||||||| | |||||| |||| |||||| ||| |||| ||||| ||||||||||| | ||||| ||| ||||||||    
T  12488975 catcattaaatcatgaattatgaacacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaat 12488876  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  12488875 tcaacaacaacata 12488862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 38811256 - 38811143
Alignment:
Q  90 atcatcaattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaatt 188  Q
    ||||||||  ||||| ||||| |||||||| | ||||||||||| |||||| ||| |||| ||||| ||||||||||| ||||||| ||||| || ||||    
T  38811256 atcatcaaaacatgaattatgcacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatctcagcataatt 38811157  T
Q  189 caacaacaacatat 202  Q
    ||||| ||||||||    
T  38811156 caacatcaacatat 38811143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 47784986 - 47784883
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    |||||| |||||| ||||||| | ||||||||| |||||||| ||| |||||||||| ||||||||| | |||||| |||| |  |||||||||||||||    
T  47784986 tcatgaattatgaacacccaagccatgaatcattaacaacaacatcacttaacaacaacaacatcaactgaacatgtttcttactacaattcaacaacaa 47784887  T
Q  198 cata 201  Q
    ||||    
T  47784886 cata 47784883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 16880128 - 16880234
Alignment:
Q  96 aattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaa 194  Q
    ||||||||| ||||| |||||||| | |||||| |||| | |||| ||| |||| |||||  |||||||||| ||||||| ||| |||||||||||||||    
T  16880128 aattcatgaattatgcacacccaagccatgaattatcatccacaacatcacttagcaacaataacatcaattgaacatgaatcttatcacaattcaacaa 16880227  T
Q  195 caacata 201  Q
    |||||||    
T  16880228 caacata 16880234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 11329185 - 11329097
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||| | |||||| |||| |||||| ||| |||| ||||| ||||||||||| | ||||| ||| ||||||||||||||||||||||    
T  11329185 acccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacata 11329097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 15876100 - 15876176
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaac 198  Q
    |||||||||||  ||||| ||| |||| ||||| ||||||||||| ||||||| ||| |||||||||||||||||||    
T  15876100 atgaatcatcattaacaacatcacttaccaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaac 15876176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 17139531 - 17139619
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||| | |||||| |||| |||||| ||| |||| ||||| ||||||||||| | ||||| ||| ||||||||||||||||||||||    
T  17139531 acccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacata 17139619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 11402620 - 11402697
Alignment:
Q  121 tatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatg-attctcatcacaattcaacaacaac 198  Q
    ||||||||||||||||||| || || |||||||| |||||||||||||||||| ||||  ||||||| |||||||||||    
T  11402620 tatgaatcatcaacaacaacatatcataacaacaacaacatcaattaaacatgtattc-aatcacaaatcaacaacaac 11402697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 14295461 - 14295549
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||| | |||||| |||| |||||| ||| ||||  |||| ||||||||||| | ||||| ||| ||||||||||||||||||||||    
T  14295461 acccaagccatgaattatcatcaacaacatcacttagaaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacata 14295549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 14528236 - 14528148
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||| | |||||| | || |||||| ||| |||| ||||| ||||||||||| | ||||| ||| ||||||||||||||||||||||    
T  14528236 acccaagccatgaattaccatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacata 14528148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 14301097 - 14301176
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||| |||| |||||| ||| ||||  |||| ||||||||||| | ||||| ||| ||||||||||||||||||||||    
T  14301097 atgaataatcatcaacaacatcacttagaaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacata 14301176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 198
Target Start/End: Complemental strand, 12539300 - 12539209
Alignment:
Q  110 gacacccaaactatgaatcatcaacaacaatatctctt---aacaacatcaacatcaattaaacatg-attctcatcacaattcaacaacaac 198  Q
    |||||||||  ||||||||||||||||||| ||||| |   ||||||| |||||||||||||||||| ||||  ||||||| |||||||||||    
T  12539300 gacacccaatgtatgaatcatcaacaacaacatctcataacaacaacaacaacatcaattaaacatgtattc-aatcacaaatcaacaacaac 12539209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 200
Target Start/End: Original strand, 14284967 - 14285072
Alignment:
Q  97 attcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaatt-aaacatgattctcatcacaattcaacaa 194  Q
    ||||||||| ||||| |||||||   || |||||| |||||||| || ||| | ||||| ||||||||||| |||| ||||||||| | |||||||||||    
T  14284967 attcatgatatatgaacacccaagtcataaatcataaacaacaacatatctgagcaacaacaacatcaattgaaacttgattctcacctcaattcaacaa 14285066  T
Q  195 caacat 200  Q
    ||||||    
T  14285067 caacat 14285072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 14059437 - 14059349
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||| | |||||| |||| |||||| ||| | || |||||  |||||||||| ||||||| | | ||||||||||||||||||||||    
T  14059437 acccaagccatgaattatcatcaacaacatcacatagcaacaataacatcaattgaacatgaatattatcacaattcaacaacaacata 14059349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 14080544 - 14080616
Alignment:
Q  125 aatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    ||||||||||||||| ||  |||  ||| | ||||||||||| |||||| ||||||||| |||||||||||||    
T  14080544 aatcatcaacaacaacattacttcgcaataacaacatcaattgaacatggttctcatcataattcaacaacaa 14080616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 47984683 - 47984759
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaac 198  Q
    |||| ||||||||||||| |||  |||||||||  |||||||||| ||||||| || |||| |||| ||||||||||    
T  47984683 atgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatccaacaacaac 47984759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 47993970 - 47994046
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaac 198  Q
    |||| ||||||||||||| |||  |||||||||  |||||||||| ||||||| || |||| |||| ||||||||||    
T  47993970 atgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatccaacaacaac 47994046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 48003257 - 48003333
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaac 198  Q
    |||| ||||||||||||| |||  |||||||||  |||||||||| ||||||| || |||| |||| ||||||||||    
T  48003257 atgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatccaacaacaac 48003333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 48012543 - 48012619
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaac 198  Q
    |||| ||||||||||||| |||  |||||||||  |||||||||| ||||||| || |||| |||| ||||||||||    
T  48012543 atgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatccaacaacaac 48012619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 16934221 - 16934118
Alignment:
Q  99 tcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaatt-aaacatgattctcatcacaattcaacaaca 196  Q
    |||||||||||||  |||||| | || |||||| |||||||| || ||| | ||||| ||||||||||| |||| ||||||||| |  ||||||||||||    
T  16934221 tcatgatttatgaatacccaagccataaatcataaacaacaacatgtctcagcaacaacaacatcaattgaaacttgattctcaccttaattcaacaaca 16934122  T
Q  197 acat 200  Q
    ||||    
T  16934121 acat 16934118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 8268965 - 8268889
Alignment:
Q  125 aatcatcaacaacaatatctcttaacaacatcaacatcaattaaa-catgattctcatcacaattcaacaacaacat 200  Q
    |||||| |||||||| || ||| | |||||  ||||||||||||| | ||||||||| | |||||||||||||||||    
T  8268965 aatcataaacaacaacatgtctcagcaacaataacatcaattaaaacttgattctcacctcaattcaacaacaacat 8268889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 8276065 - 8275989
Alignment:
Q  125 aatcatcaacaacaatatctcttaacaacatcaacatcaattaaa-catgattctcatcacaattcaacaacaacat 200  Q
    |||||| |||||||| || ||| | |||||  ||||||||||||| | ||||||||| | |||||||||||||||||    
T  8276065 aatcataaacaacaacatgtctcagcaacaataacatcaattaaaacttgattctcacctcaattcaacaacaacat 8275989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0670 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 7914 - 7811
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  7914 tcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaa 7815  T
Q  198 cata 201  Q
    ||||    
T  7814 cata 7811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 3e-39; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 21195012 - 21195122
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  21195012 catcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttaacaacaacaacattaattaaacatgattctcatcacaat 21195111  T
Q  188 tcaacaacaac 198  Q
    |||||||||||    
T  21195112 tcaacaacaac 21195122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 5768408 - 5768305
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    |||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||    
T  5768408 tcataatttatgaacacccaatctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaattaacaacaa 5768309  T
Q  198 cata 201  Q
    ||||    
T  5768308 cata 5768305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 33397360 - 33397463
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    ||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  33397360 tcatgatttatgaacacacaagctatgaatcatcaacaacaatatctcttaacaacaacaagatcaattaaacatgattctcatcacaaatcaacaacaa 33397459  T
Q  198 cata 201  Q
    ||||    
T  33397460 cata 33397463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 8538160 - 8538046
Alignment:
Q  88 acatcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaa 186  Q
    |||||||||| |||| |||||||| ||||||| | |||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||| ||    
T  8538160 acatcatcaaatcattatttatgaacacccaagccatgaatcatcaacaacaatattccttaacaacaacaacatcaattaaacatgattctcatcataa 8538061  T
Q  187 ttcaacaacaacata 201  Q
    |||||||||||||||    
T  8538060 ttcaacaacaacata 8538046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 8603399 - 8603285
Alignment:
Q  88 acatcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaa 186  Q
    |||||||||| |||| |||||||| ||||||| | |||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||| ||    
T  8603399 acatcatcaaatcattatttatgaacacccaagccatgaatcatcaacaacaatattccttaacaacaacaacatcaattaaacatgattctcatcataa 8603300  T
Q  187 ttcaacaacaacata 201  Q
    |||||||||||||||    
T  8603299 ttcaacaacaacata 8603285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 88 - 201
Target Start/End: Complemental strand, 40436519 - 40436405
Alignment:
Q  88 acatcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaa 186  Q
    ||||||| || ||||||||| ||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||    
T  40436519 acatcataaactcatgatttgtgaacacccaagctatgaatcatcaacaacaatatctcttaaaaacaacaacatcaattaaacataattctcatcacaa 40436420  T
Q  187 ttcaacaacaacata 201  Q
     ||||||||||||||    
T  40436419 atcaacaacaacata 40436405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 93 - 201
Target Start/End: Original strand, 17608930 - 17609039
Alignment:
Q  93 atcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaa 191  Q
    ||||| ||||||||||||| ||||||| | |||||||||||||||||||||| |||||||||| ||||| ||||| ||||||| |||||||| |||||||    
T  17608930 atcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttaacaacaacaacaacaattgaacatgaatctcatcataattcaa 17609029  T
Q  192 caacaacata 201  Q
    ||||||||||    
T  17609030 caacaacata 17609039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 37234109 - 37233996
Alignment:
Q  89 catcatcaattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| |||||||||||| ||||||||   |||||||||||||||||||||| |||| ||||| ||||||||||| ||||||| ||||||||||||    
T  37234109 catcatcaaatcatgatttatggacacccaagtcatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcacaat 37234010  T
Q  188 tcaacaacaacata 201  Q
    ||||| ||||||||    
T  37234009 tcaaccacaacata 37233996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 52400661 - 52400742
Alignment:
Q  120 ctatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||||||||||||||||| |||||| | ||||| |||| ||||||||||||||||||||||| |||||||||||||||||    
T  52400661 ctatgaatcatcaacaacaacatctctcagcaacaacaacgtcaattaaacatgattctcatcataattcaacaacaacata 52400742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 201
Target Start/End: Complemental strand, 76599 - 76509
Alignment:
Q  111 acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||||| |||||||||||||||||||||||||| ||| |||| ||| ||||||||||||||| ||||| | || |||||||||||||||    
T  76599 acacccaagctatgaatcatcaacaacaatatctcataataacaacaatatcaattaaacatgaatctcaccgcatttcaacaacaacata 76509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 22143610 - 22143497
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| |||||| ||||||  |||||| | |||||||||||||||||||||| |||| || || ||||||||||| | |||| ||||||||| |||    
T  22143610 catcatcaaatcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttagcagcaacaacatcaattgagcatggttctcatcataat 22143511  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  22143510 tcaacaacaacata 22143497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 49997520 - 49997417
Alignment:
Q  100 catgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaa-caacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    |||||||||||| |||| || | |||||| ||||||||||||||||||||| ||||| |||||||| |||||||||||||||| |  |||||||||||||    
T  49997520 catgatttatgaacaccaaatccatgaatgatcaacaacaatatctcttaagcaacaacaacatcagttaaacatgattctcaccttaattcaacaacaa 49997421  T
Q  198 cata 201  Q
    ||||    
T  49997420 cata 49997417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 20194065 - 20194128
Alignment:
Q  111 acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatga 174  Q
    |||| ||| |||||||||||||||||||||||||| | |||||| |||||||||||||||||||    
T  20194065 acactcaagctatgaatcatcaacaacaatatctcatgacaacaacaacatcaattaaacatga 20194128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 25093901 - 25093970
Alignment:
Q  129 atcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||| ||||||||||| |||||||||   ||||||||||||||||| ||||||||||| ||||||||||||||    
T  25093901 atcatcaacaatatcttttaacaaca---acatcaattaaacatgaatctcatcacaaatcaacaacaacata 25093970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 20177207 - 20177286
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||||||||| |||||| ||| |||| ||||| ||||||||||| ||| ||| | | | ||||||||||||||||||||    
T  20177207 atgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacttgacttttaccacaattcaacaacaacata 20177286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 21650287 - 21650184
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaatt-aaacatgattctcatcacaattcaacaaca 196  Q
    ||||||| ||||| ||||||| | || |||||| |||||||| || ||| ||||||| ||||||||||| |||| ||||||||| |  ||||||||||||    
T  21650287 tcatgatatatgaacacccaagccataaatcataaacaacaacatgtctcaacaacaacaacatcaattgaaacttgattctcaccttaattcaacaaca 21650188  T
Q  197 acat 200  Q
    ||||    
T  21650187 acat 21650184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 16645978 - 16646023
Alignment:
Q  156 caacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  16645978 caacatcaattgaacatgaatcttatcacaattcaacaacaacata 16646023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 113 - 202
Target Start/End: Complemental strand, 51627888 - 51627799
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacatat 202  Q
    |||||| | |||||| |||| |||||  ||| |||| ||||| ||||||||||| | ||||| ||| ||||||||||||||||| |||||    
T  51627888 acccaagccatgaattatcatcaacatcatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaccatat 51627799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 202
Target Start/End: Complemental strand, 36356532 - 36356428
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    |||||| |||||| ||||||| | || |||||||| |||||| ||| ||||  |||| ||||||||||| ||||||| ||||| || || |||||| |||    
T  36356532 tcatgaattatgaacacccaagccataaatcatcatcaacaacatcacttagaaacaacaacatcaattgaacatgaatctcagcataaatcaacatcaa 36356433  T
Q  198 catat 202  Q
    |||||    
T  36356432 catat 36356428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 41229154 - 41229098
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattct 178  Q
    ||||||||| |||||||| ||| |||| ||||| ||||||||||| |||||||||||    
T  41229154 atgaatcattaacaacaacatcacttagcaacaacaacatcaattgaacatgattct 41229098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 13377055 - 13376976
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||||| || |||||| ||| |||| ||||| ||||||||||| | ||||| | ||| || |||||||||||||||||    
T  13377055 atgaatcaacatcaacaacatcacttagcaacaacaacatcaattgagcatgactttcaccataattcaacaacaacata 13376976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 16656699 - 16656749
Alignment:
Q  151 aacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||| |||| |||||| ||||||| ||| ||||||||||||||||||||||    
T  16656699 aacaacaacttcaattgaacatgaatcttatcacaattcaacaacaacata 16656749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 20254356 - 20254424
Alignment:
Q  133 acaacaatatctcttaacaacatcaacatcaattaaa-catgattctcatcacaattcaacaacaacat 200  Q
    ||||||| || ||| | ||||| |||||||||||||| | ||||||||| | |||||||||||||||||    
T  20254356 acaacaacatgtctcagcaacaacaacatcaattaaaacttgattctcacctcaattcaacaacaacat 20254424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 199
Target Start/End: Complemental strand, 22403348 - 22403248
Alignment:
Q  99 tcatgatttatgacacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaac 198  Q
    |||||| | |||| |||||| | |||||| |||| |||||| ||  |||||||||| ||||| || |||| |||||  || ||||||||||| |||||||    
T  22403348 tcatgaatcatgaaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacaacagttaatcatgaaacttatcacaattcatcaacaac 22403249  T
Q  199 a 199  Q
    |    
T  22403248 a 22403248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 21997 - 22110
Alignment:
Q  89 catcatcaattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||||||||||||||||  | |||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  21997 catcatcaattcatgatttatacatacccaagctgtgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgaatctcatcacaat 22096  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  22097 tcaacaacaacata 22110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 29962 - 30075
Alignment:
Q  89 catcatcaattcatgatttatgac--acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaa 186  Q
    ||||||||||||||||||||| ||  |||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  29962 catcatcaattcatgatttat-acgtacccaagctatgaatcatcaacaacaatatcgcttaacaacaacaacatcaattaaacatgattctcatcacaa 30060  T
Q  187 ttcaacaacaacata 201  Q
    |||||||| ||||||    
T  30061 ttcaacaaaaacata 30075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 1e-38; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 6456622 - 6456735
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| |||||||| |||| ||||||| | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6456622 catcatcaaatcatgattcatgaacacccaagccatgaatcatcaacaacgatatctcttaacaacaacaacatcaattaaacatgattctcatcacaat 6456721  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  6456722 tcaacaacaacata 6456735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 21109758 - 21109861
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    ||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  21109758 tcatgatttatgaacacccaagctatgaatcatcaataacaatatctcttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaa 21109857  T
Q  198 cata 201  Q
    ||||    
T  21109858 cata 21109861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 37983362 - 37983475
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| || |||||||||| ||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||    
T  37983362 catcatcaaatcctgatttatgaacacccaagctatgaatcatcaacaacaatatcacttaacaacaacaacatcaattaaacatgattctcattacaat 37983461  T
Q  188 tcaacaacaacata 201  Q
    ||||||| ||||||    
T  37983462 tcaacaataacata 37983475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 92 - 201
Target Start/End: Original strand, 29917966 - 29918076
Alignment:
Q  92 catcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattca 190  Q
    |||||| ||||||||||||| ||||||| | ||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||| ||||||    
T  29917966 catcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttagcaacaacaacatcagttaaacatgattctcatcataattca 29918065  T
Q  191 acaacaacata 201  Q
    |||||||||||    
T  29918066 acaacaacata 29918076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 24084075 - 24084188
Alignment:
Q  89 catcatcaattcatgattta-tgacacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| |||||||||| | |||||||| | ||||||| ||||||||||||| ||||| ||||| |||||||||||||||||||||| |||||||||    
T  24084075 catcatcaaatcatgatttactaacacccaagccatgaatcttcaacaacaatatttcttagcaacaacaacatcaattaaacatgattcacatcacaat 24084174  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  24084175 tcaacaacaacata 24084188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 16835538 - 16835435
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    ||||||||||||| || |||| |||||||||||||||||||| |||||||||||||| |||||| |||||||||||| ||||||||||| ||||||||||    
T  16835538 tcatgatttatgaacatccaagctatgaatcatcaacaacaacatctcttaacaacaacaacattaattaaacatgaatctcatcacaaatcaacaacaa 16835439  T
Q  198 cata 201  Q
    ||||    
T  16835438 cata 16835435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 22885674 - 22885753
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  22885674 atgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgattctcaacataattcaacaacaacata 22885753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 19873849 - 19873934
Alignment:
Q  96 aattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctca 180  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  19873849 aattcatgatttatgaacacccaagctatgaatcatcaacaacaatatctcttaacaacaacaacatcaattaaacatgaatctca 19873934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 21617014 - 21617127
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| |||||| |||||| ||||||| | |||||||| ||||||||||||| |||| ||||| ||||||||||| ||||||| ||||||||||||    
T  21617014 catcatcaaatcatgaattatgaacacccaagccatgaatcaacaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcacaat 21617113  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  21617114 tcaacaacaacata 21617127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 99 - 197
Target Start/End: Complemental strand, 23234724 - 23234625
Alignment:
Q  99 tcatgatttatgacacc-caaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    ||||||||||||| | | ||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| | ||||||||||    
T  23234724 tcatgatttatgaaaactcaagctatgaatcatcaacaacaatatctcttaacaataacaacatcaattaaacatgattctcatcactaatcaacaacaa 23234625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 26560057 - 26559951
Alignment:
Q  96 aattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaa 194  Q
    |||||| ||||||||| ||||||| | | ||||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| |||||||    
T  26560057 aattcacgatttatgaacacccaagccaagaatcatcaccaacaatatctcttagcaacaacaacatcaattaaacataattctcatcacaaatcaacaa 26559958  T
Q  195 caacata 201  Q
    |||||||    
T  26559957 caacata 26559951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 21222857 - 21222744
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||| ||| | |||||||||||||||||||||| |||| ||||| |||||| |||| ||||||| ||| ||||||||    
T  21222857 catcatcaagtcatgatttatgaacactcaatccatgaatcatcaacaacaatatcacttagcaacaacaacattaattgaacatgaatcttatcacaat 21222758  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  21222757 tcaacaacaacata 21222744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 99 - 202
Target Start/End: Complemental strand, 23981755 - 23981651
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    |||||| |||||| ||||||| | |||||||||||||||||||||| |||| ||||| ||||||||||| |||||| ||||||||| |||||||||||||    
T  23981755 tcatgagttatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatggttctcatcataattcaacaacaa 23981656  T
Q  198 catat 202  Q
    |||||    
T  23981655 catat 23981651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 111 - 201
Target Start/End: Original strand, 23417262 - 23417352
Alignment:
Q  111 acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||| | ||| ||||| ||||||||||||||    
T  23417262 acacccaagctatgaatcatcaacaacaatacctcataacaacaacaacatcaattaaacatgaatgtcaccacaaatcaacaacaacata 23417352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 19862207 - 19862320
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| |||||| |||||| |||||||   ||||||||||||||| |||||| |||| ||||| |||||||||||  |||||||||| ||||||||    
T  19862207 catcatcaaatcatgaattatgaacacccaagtcatgaatcatcaacaataatatcacttagcaacaacaacatcaattgcacatgattcttatcacaat 19862306  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  19862307 tcaacaacaacata 19862320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 23493917 - 23494030
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| |||||| |||||| ||||||| | ||||||||||| |||||| ||| |||| ||||| ||||||||||| ||||||| ||| ||||||||    
T  23493917 catcatcaaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaat 23494016  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  23494017 tcaacaacaacata 23494030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 201
Target Start/End: Original strand, 7728424 - 7728531
Alignment:
Q  95 caattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaaca 193  Q
    |||||||||| ||||| |||||||| | || ||| |||| |||||| ||| |||| ||||| ||||||||||| ||||||| ||| ||||||||||||||    
T  7728424 caattcatgaattatgcacacccaagcgataaattatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaaca 7728523  T
Q  194 acaacata 201  Q
    ||||||||    
T  7728524 acaacata 7728531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 24225543 - 24225457
Alignment:
Q  111 acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||  |||||||||||||||||| |  || ||||| ||||||||||    
T  24225543 acacccaagttatgaatcatcaacaacaatatctcataacaacaataacatcaattaaacatgaattccaccacaaatcaacaacaa 24225457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 432497 - 432574
Alignment:
Q  124 gaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||||||||||||||||| |||| ||||| ||||||||||| ||||||| ||| | |||||| |||||||||||||    
T  432497 gaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatcttaccacaatccaacaacaacata 432574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 5451092 - 5450979
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| || |||| | | ||||||||| |||||| ||| |||| ||||| |||||||| || ||||||| | | ||||||||    
T  5451092 catcatcaaatcatgatttatgatcatccaagccaagaatcatcatcaacaacatcacttagcaacaacaacatcagttgaacatgaattttatcacaat 5450993  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  5450992 tcaacaacaacata 5450979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 3673860 - 3673973
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| || |||||||||| ||||||| | ||||||||||| |||| |  || |||| ||||| ||||||||||| | |||||  || ||||||||    
T  3673860 catcatcaaatcgtgatttatgaacacccaagccatgaatcatcatcaaccacctcgcttagcaacaacaacatcaattgatcatgaaacttatcacaat 3673959  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  3673960 tcaacaacaacata 3673973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 11763694 - 11763641
Alignment:
Q  148 aacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||||| ||||| ||||||||||||| || |||||||| ||||||||||||||    
T  11763694 aacaacaacaacaacaattaaacatgaatcccatcacaaatcaacaacaacata 11763641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 16595506 - 16595619
Alignment:
Q  89 catcatcaattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| |||||||||| | ||| ||||||||   |||||| ||||| ||||  |||  ||||||||||| ||||||||| ||||||| ||||| || |||    
T  16595506 catcaacaattcatgaatcatgcacacccaagtcatgaattatcaataacatcatcatttaacaacatctacatcaattgaacatgaatctcaacataat 16595605  T
Q  188 tcaacaacaacata 201  Q
    |||||| |||||||    
T  16595606 tcaacatcaacata 16595619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 200
Target Start/End: Original strand, 7528935 - 7529011
Alignment:
Q  125 aatcatcaacaacaatatctcttaacaacatcaacatcaatt-aaacatgattctcatcacaattcaacaacaacat 200  Q
    |||||| |||||||| || ||| | ||||| ||||||||||| |||| ||||||||| | |||||||||||||||||    
T  7528935 aatcataaacaacaacatatctcagcaacaacaacatcaattgaaacttgattctcacctcaattcaacaacaacat 7529011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 9730630 - 9730527
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaat-taaacatgattctcatcacaattcaacaaca 196  Q
    ||||||| ||||| ||||||| | || |||||| ||||||||||| ||| | ||||| ||||||||||  |||| ||||||||| |  ||||||||||||    
T  9730630 tcatgatatatgaacacccaagccataaatcataaacaacaatatgtctcagcaacaacaacatcaatcgaaacttgattctcaccttaattcaacaaca 9730531  T
Q  197 acat 200  Q
    ||||    
T  9730530 acat 9730527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 22054096 - 22053987
Alignment:
Q  89 catcatcaattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||||||||||| | ||| | |||||| | |||| ||||||||||||| |||  |||||| ||  |||||||||| ||||||| ||  ||| ||||    
T  22054096 catcatcaattcatgaat-atgtagacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaat 22053998  T
Q  188 tcaacaacaac 198  Q
    |||||||||||    
T  22053997 tcaacaacaac 22053987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 28902252 - 28902302
Alignment:
Q  151 aacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||| |||| |||||| ||||||| ||| ||||||||||||||||||||||    
T  28902252 aacaacaacttcaattgaacatgaatcttatcacaattcaacaacaacata 28902302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 28938647 - 28938697
Alignment:
Q  151 aacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||| |||| |||||| ||||||| ||| ||||||||||||||||||||||    
T  28938647 aacaacaacttcaattgaacatgaatcttatcacaattcaacaacaacata 28938697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 198
Target Start/End: Complemental strand, 18531297 - 18531221
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaac 198  Q
    |||| ||||||||||||| |||  |||||| ||  |||||||||| ||||||| ||  ||| |||||||||||||||    
T  18531297 atgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaattcaacaacaac 18531221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 44047 - 43934
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||||||| | |||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||| |||    
T  44047 catcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattaaacatgattctcatcataat 43948  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  43947 tcaacaacaacata 43934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 23887 - 23808
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||||||||||||||||||  |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  23887 atgaatcatcaacaacaatattccttaacaacaacaacgtcaattaaacatgattctcatcacaattcaacaacaacata 23808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 2523 - 2636
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||| |||| ||||| ||||||||||| ||||||| |||||||| |||    
T  2523 catcatcaaatcatgatttatgaacacccaaaccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcataat 2622  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  2623 tcaacaacaacata 2636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 6542 - 6655
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| |||| || | ||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||| |||    
T  6542 catcatcaaatcatgatttatgaacacctaagccatgaatcatcaacaacaatatctcttagcaacaacatcatcaattaaacatgattctcatcataat 6641  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  6642 tcaacaacaacata 6655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 74; Significance: 7e-34; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 131834 - 131939
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||| ||||| ||||||| ||||||||||||||||||    
T  131834 catcatcaattcatgatttatgaacacccaagctatgaatcatcaacaaaaatatttcttaacaacaacaacaacaattaagcatgattctcatcacaat 131933  T
Q  188 tcaaca 193  Q
    ||||||    
T  131934 tcaaca 131939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 68180 - 68094
Alignment:
Q  115 ccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||| |||||||||||||| ||||||||||| | |||||| ||||||||||||||||||| ||||| |||| |||||||||||||||    
T  68180 ccaagctatgaatcatcaaaaacaatatctcatgacaacaacaacatcaattaaacatgaatctcaccacatttcaacaacaacata 68094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 201
Target Start/End: Complemental strand, 103165 - 103058
Alignment:
Q  95 caattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaaca 193  Q
    |||||||||| ||||| |||||||||| |||||| |||| |||||| ||| ||||  ||||  |||||||||| ||||||| | | ||||||||||||||    
T  103165 caattcatgaattatgcacacccaaaccatgaattatcatcaacaacatcacttagaaacaataacatcaattgaacatgaatgttatcacaattcaaca 103066  T
Q  194 acaacata 201  Q
    ||||||||    
T  103065 acaacata 103058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 109613 - 109701
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||| | |||||| |||| |||||| ||| |||| ||||| ||||||||| | | ||||| ||| ||||||||||||||||||||||    
T  109613 acccaagccatgaattatcatcaacaacatcacttagcaacaacaacatcaactgatcatgaatcttatcacaattcaacaacaacata 109701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 69455 - 69568
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||||||||| ||||||| | |||||||||||||||||||||| |||| ||||| ||||||||||| ||||||| ||||||||||||    
T  69455 catcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcacaat 69554  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  69555 tcaacaacaacata 69568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 108015 - 108119
Alignment:
Q  96 aattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaa 194  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||  |||||||||||||||||    
T  108015 aattcatgatttatgaacacccaagctatgaatcatcaacaacaatatatcttaacaacaacaacatcaattaaacatgatcttcatcacaattcaacaa 108114  T
Q  195 caaca 199  Q
     ||||    
T  108115 taaca 108119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 122 - 200
Target Start/End: Complemental strand, 17536 - 17458
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacat 200  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17536 atgaatcatcaacaacaatatctcttaaccacaacaacatcaattaaacatgattctcatcacaattcaacaacaacat 17458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 122 - 200
Target Start/End: Complemental strand, 61449 - 61371
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacat 200  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  61449 atgaatcatcaacaacaatatctcttaaccacaacaacatcaattaaacatgattctcatcacaattcaacaacaacat 61371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 22671 - 22558
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| |||| ||| |||| ||||||||||||||||| ||||||||||||||  ||||||||| |||||||||||||||||||||| |||| ||||    
T  22671 catcatcaaatcataattcatgaacacccaaactatgaatcttcaacaacaatatcaattaacaacaacaacatcaattaaacatgattcacatctcaat 22572  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  22571 tcaacaacaacata 22558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 197502 - 197389
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||||  ||||||||||||  |||||||| |||||||||||||||||||||| |||| ||||| ||||||||||| ||||||| ||||||||||||    
T  197502 catcatcaaagcatgatttatgaagacccaaaccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatctcatcacaat 197403  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  197402 tcaacaacaacata 197389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 7400 - 7513
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| |||||||||||||  |||||| | ||||||||| | ||||||||||||||| ||||| |||||||||||||||||||||||||||| |||    
T  7400 catcatcaaatcatgatttatgagtacccaagccatgaatcattagcaacaatatctcttagcaacaccaacatcaattaaacatgattctcatcataat 7499  T
Q  188 tcaacaacaacata 201  Q
    ||||||||| ||||    
T  7500 tcaacaacagcata 7513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 16825 - 16938
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| |||||||||||||  |||||| | ||||||||| | ||||||||||||||| ||||| |||||||||||||||||||||||||||| |||    
T  16825 catcatcaaatcatgatttatgagtacccaagccatgaatcattagcaacaatatctcttagcaacaccaacatcaattaaacatgattctcatcataat 16924  T
Q  188 tcaacaacaacata 201  Q
    ||||||||| ||||    
T  16925 tcaacaacagcata 16938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 4603 - 4716
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| || |||| ||||| ||||||| | |||||||||||||||||| |  ||||||||||| |||||||||||||||||||||| |||||||||    
T  4603 catcatcaaatcttgatatatgaacacccaagccatgaatcatcaacaacaaaacttcttaacaacaacaacatcaattaaacatgattcccatcacaat 4702  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  4703 tcaacaacaacata 4716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 85542 - 85644
Alignment:
Q  100 catgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaac 198  Q
    |||||||||||| |||||||   ||||||||||||||||||||||||||| ||||| ||| |||| ||||||||||||||||||| ||||||||||||||    
T  85542 catgatttatgaacacccaagtcatgaatcatcaacaacaatatctcttagcaacaacaatatcacttaaacatgattctcatcataattcaacaacaac 85641  T
Q  199 ata 201  Q
    |||    
T  85642 ata 85644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 53345 - 53453
Alignment:
Q  89 catcatcaattcatgatttatgacacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaatt 188  Q
    ||||||||| |||||||| ||||| ||||| | ||||||||| ||||||||| || |||| ||||| ||||||| ||| ||||||| |||||||||||||    
T  53345 catcatcaaatcatgattaatgactcccaagccatgaatcattaacaacaatgtcacttagcaacaacaacatccattgaacatgaatctcatcacaatt 53444  T
Q  189 caacaacaa 197  Q
    || ||||||    
T  53445 catcaacaa 53453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 3014 - 2908
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatca---attaaacatgattctcatcacaattcaacaa 194  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||| ||||| ||   ||||||||||| ||||||||||| |||||||    
T  3014 tcatgatttatgaacacccaagctatgaatcatcaacaacaatatcttttaacaacaacaacaacataaattaaacatgaatctcatcacaaatcaacaa 2915  T
Q  195 caacata 201  Q
    |||||||    
T  2914 caacata 2908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 104871 - 104759
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||||||||||| ||||||  |||||| | |||||||||||||||||||||| |||| ||||| ||||||||||| |||||| || |||||| |||    
T  104871 catcatcaattcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaatt-aacatggttatcatcataat 104773  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  104772 tcaacaacaacata 104759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 196
Target Start/End: Complemental strand, 93997 - 93913
Alignment:
Q  112 cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaaca 196  Q
    ||||||||  |||||| |||| |||||| ||| ||||  || | ||||||||||| ||||||| | ||||||||||| |||||||    
T  93997 cacccaaatcatgaattatcatcaacaacatcacttattaataacaacatcaattgaacatgaatttcatcacaatttaacaaca 93913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 31018 - 31131
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| || |||||||||| ||| ||| | ||||||||||||||||| |||| |||| ||||| ||||||||||| ||||||| ||||||||||||    
T  31018 catcatcaaatcttgatttatgaacactcaagccatgaatcatcaacaacagtatcacttagcaacaacaacatcaattgaacatgaatctcatcacaat 31117  T
Q  188 tcaacaacaacata 201  Q
    ||||||| ||||||    
T  31118 tcaacaagaacata 31131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 79537 - 79651
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| |||||||||| ||||||  |||||| | ||||||||||||||| |||||| |||| ||||| ||||||||||| |||||| ||| ||||| |||    
T  79537 catcaccaattcatgaattatgaatacccaagccatgaatcatcaacaataatatcacttagcaacaacaacatcaattgaacatggttcacatcataat 79636  T
Q  188 tcaacaacaacatat 202  Q
    |||||||||||||||    
T  79637 tcaacaacaacatat 79651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 201
Target Start/End: Original strand, 12786 - 12876
Alignment:
Q  111 acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||||||  ||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |  || ||||| ||||||||||||||    
T  12786 acacccaagttatgaatcatcaacaacaatatctcataacaacaacaacatcaattaaacatgaattccaccacaaatcaacaacaacata 12876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 113 - 202
Target Start/End: Original strand, 2478 - 2567
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacatat 202  Q
    |||||| | |||||||||||||||||| ||| |||| ||||| ||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  2478 acccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatggttctcatcataattcaacaacaacatat 2567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 7274 - 7161
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| |||||||||| |||||| ||| ||| | |||||||||||||||||||||| |||| || || ||||||||||| ||||||||||| ||||||||    
T  7274 catcaacaattcatgaattatgaacactcaagccatgaatcatcaacaacaatatcacttagcagcaacaacatcaattgaacatgattcttatcacaat 7175  T
Q  188 tcaacaacaacata 201  Q
     ||| |||||||||    
T  7174 ccaataacaacata 7161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 196
Target Start/End: Complemental strand, 8440 - 8333
Alignment:
Q  89 catcatcaattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||||||||| | |||| | |||||| | |||| |||| |||||||| |||  ||||||||| ||||||||||| |||||| ||||||||| |||    
T  8440 catcatcaattcatg-tatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataat 8342  T
Q  188 tcaacaaca 196  Q
    |||||||||    
T  8341 tcaacaaca 8333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 8008 - 8121
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| |||||||||| ||||||  |||||| |||||||||||||||||||| ||| | || ||||| ||||||||||| |||||| ||||||||| |||    
T  8008 catcaccaattcatgaattatgaatacccaagctatgaatcatcaacaacaacatcacatagcaacaacaacatcaattgaacatggttctcatcataat 8107  T
Q  188 tcaacaacaacata 201  Q
    || |||||||||||    
T  8108 tccacaacaacata 8121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 77096 - 76983
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| ||| |||||| ||||||  |||||| | |||||||||||| ||||||||| |||| ||||| ||||||||||| ||||||| ||||| ||||||    
T  77096 catcaacaaatcatgaattatgaatacccaagccatgaatcatcaataacaatatcacttagcaacaacaacatcaattgaacatgaatctcaccacaat 76997  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  76996 tcaacaacaacata 76983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 1195 - 1107
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgatt 176  Q
    ||||||||| ||||||||||||| ||||||| | |||||||||||||||||||||  |||| ||||| |||||||||||||||||||||    
T  1195 catcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatattccttagcaacaacaacatcaattaaacatgatt 1107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 111 - 201
Target Start/End: Complemental strand, 1100 - 1010
Alignment:
Q  111 acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||| ||| ||||||||||| |||||| ||||||| |||||||| ||||||||||||||||||| ||||  |||| |||||||||||||||    
T  1100 acacacaagctatgaatcattaacaacgatatctcataacaacaacaacatcaattaaacatgaatctccccacatttcaacaacaacata 1010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 4560 - 4674
Alignment:
Q  88 acatcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaa 186  Q
    |||||||||| |||||  |||||| ||||||| | |||||||||||||||||||||| |||| ||||| ||||||||||| || |||| | | |||||||    
T  4560 acatcatcaaatcatggattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaaaatgaatattatcacaa 4659  T
Q  187 ttcaacaacaacata 201  Q
    || ||||||||||||    
T  4660 ttaaacaacaacata 4674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 9174 - 9288
Alignment:
Q  88 acatcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaa 186  Q
    |||||||||| |||||  |||||| ||||||| | |||||||||||||||||||||| |||| ||||| ||||||||||| || |||| | | |||||||    
T  9174 acatcatcaaatcatggattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaaaatgaatattatcacaa 9273  T
Q  187 ttcaacaacaacata 201  Q
    || ||||||||||||    
T  9274 ttaaacaacaacata 9288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 10660 - 10770
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||||||||||| |||||| ||||||| | |||||| ||||||||||| ||| |||| ||| | ||||||||||| |||||| ||||||||| |||    
T  10660 catcatcaattcatgaattatgaacacccaagccatgaatgatcaacaacaacatcacttagcaaaaacaacatcaattgaacatggttctcatcataat 10759  T
Q  188 tcaacaacaac 198  Q
    || ||||||||    
T  10760 tcgacaacaac 10770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 5937 - 6051
Alignment:
Q  88 acatcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaa 186  Q
    |||||||||| |||||  |||||| ||| ||| | |||||||||||||||||||||| |||| ||||| ||||||||||| ||||||| | | |||||||    
T  5937 acatcatcaaatcatggattatgaacactcaagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgaacatgaatattatcacaa 6036  T
Q  187 ttcaacaacaacata 201  Q
    ||||||||| |||||    
T  6037 ttcaacaaccacata 6051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 25375 - 25457
Alignment:
Q  120 ctatgaatcatcaacaacaatatctcttaacaacatcaa-catcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||||||||||||||||||||| |||||| |||| ||| |||||||||||||||| ||||||||||| ||||||| ||||||    
T  25375 ctatgaatcatcaacaacaatatttcttaataacaacaatcatcaattaaacatgaatctcatcacaaatcaacaagaacata 25457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 68121 - 68014
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacat----caattaaacatgattctcatcacaattcaaca 193  Q
    ||||||||||||| ||||||| |||| |||||||||||||||| | ||||||||||| ||||||    |||||||| || ||||||||||||| ||||||    
T  68121 tcatgatttatgaacacccaagctataaatcatcaacaacaatgtatcttaacaacaacaacatacatcaattaaatataattctcatcacaaatcaaca 68022  T
Q  194 acaacata 201  Q
    ||||||||    
T  68021 acaacata 68014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 4573 - 4460
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||||||||||| ||||||  |||||||  || ||||| ||||||||||||| |||| ||||| |||||||||||||||||| ||||| ||| |||    
T  4573 catcatcaattcatgaattatgaatacccaaatcataaatcaccaacaacaatatcacttagcaacaacaacatcaattaaacatggttctcttcataat 4474  T
Q  188 tcaacaacaacata 201  Q
    |||| |||| ||||    
T  4473 tcaaaaacatcata 4460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 1592 - 1663
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaac 159  Q
    |||||||||||||||| ||||||  |||||| | |||||||| ||||||||||||| |||| ||||| ||||    
T  1592 catcatcaattcatgaattatgaatacccaagccatgaatcaccaacaacaatatcacttagcaacaacaac 1663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 41648 - 41760
Alignment:
Q  89 catcatcaattcatgatttatg-acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||||||||||| | ||| | |||||| | |||| ||||||||||||| |||  ||||||||| ||||||||||| |||||| ||||||||| |||    
T  41648 catcatcaattcatgaat-atgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatcaattgaacatggttctcatcataat 41746  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  41747 tcaacaacaacata 41760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 13539 - 13618
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||| ||||||||||||| |||  ||||||||| ||||||||||| |||||| ||||||||| |||||||||||||||||    
T  13539 atgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataattcaacaacaacata 13618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 111 - 201
Target Start/End: Complemental strand, 12960 - 12870
Alignment:
Q  111 acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||||||  ||||||||||||||||||||||||| |||||||| |||||||| |||||||||| |  || ||||  ||||||||||||||    
T  12960 acacccaagttatgaatcatcaacaacaatatctcataacaacaacaacatcatttaaacatgaattccaccacacatcaacaacaacata 12870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 111 - 201
Target Start/End: Complemental strand, 33640 - 33550
Alignment:
Q  111 acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||||| |||| |||||||||||| |||||||| | |||||| ||||||||||||||  ||| ||||| |||| |||||||||||||||    
T  33640 acacccaagctataaatcatcaacaataatatctcatgacaacaacaacatcaattaaatgtgaatctcaccacatttcaacaacaacata 33550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 11092 - 11201
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||||||| ||||||| ||||| |||| || | ||||||||| |||||||| ||| | || ||||| ||||||||||| |||||| ||||||||| |||    
T  11092 catcatcaaatcatgatctatgaacacctaagccatgaatcataaacaacaacatcacatagcaacaacaacatcaattgaacatggttctcatcataat 11191  T
Q  188 tcaacaacaa 197  Q
    ||||||||||    
T  11192 tcaacaacaa 11201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 16090 - 15977
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||||||||||| ||||||  ||||||   || ||||| ||||||||||||| |||| ||||| |||||||||||||||||| ||||| ||| |||    
T  16090 catcatcaattcatgaattatgaatacccaagtcataaatcaccaacaacaatatcacttagcaacaacaacatcaattaaacatggttctcttcataat 15991  T
Q  188 tcaacaacaacata 201  Q
    |||| |||| ||||    
T  15990 tcaaaaacatcata 15977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 3106 - 2993
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||||||||||| ||||||  |||||    || ||||| ||||||||||||| |||| ||||| |||||||||||||||||| ||||| ||| |||    
T  3106 catcatcaattcatgaattatgaatacccatgtcataaatcaccaacaacaatatcacttagcaacaacaacatcaattaaacatggttctcttcataat 3007  T
Q  188 tcaacaacaacata 201  Q
    |||| |||| ||||    
T  3006 tcaaaaacatcata 2993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 7168 - 7283
Alignment:
Q  88 acatcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacat-caattaaacatgattctcatcaca 185  Q
    |||||||||| |||||  |||||| ||||||| | |||||||||||||||||||||| |||| ||||| |||||| ||||| || |||| | | ||||||    
T  7168 acatcatcaaatcatggattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatccaattgaaaatgaatattatcaca 7267  T
Q  186 attcaacaacaacata 201  Q
    ||| ||||||||||||    
T  7268 attaaacaacaacata 7283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 28544 - 28647
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaa 197  Q
    |||||| |||||| ||||||| | ||||||||| |||||||| ||| |||| ||||| ||||||||||| ||||| ||||| |  |||||||||||||||    
T  28544 tcatgaattatgaacacccaagccatgaatcattaacaacaacatcacttagcaacaacaacatcaattgaacataattcttactacaattcaacaacaa 28643  T
Q  198 cata 201  Q
    ||||    
T  28644 cata 28647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 33659 - 33773
Alignment:
Q  88 acatcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaa 186  Q
    |||| ||||| |||||| |||||| ||||| | | |||||||||||||||||||||| |||| ||||| ||||||||||| | |||||  || |||| ||    
T  33659 acattatcaaatcatgaattatgaacaccctagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgatcatgaaacttatcaaaa 33758  T
Q  187 ttcaacaacaacata 201  Q
    |||| ||||||||||    
T  33759 ttcatcaacaacata 33773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 46162 - 46276
Alignment:
Q  88 acatcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaa 186  Q
    |||| ||||| |||||| |||||| ||||||| | |||||||||||||||||||||| ||||  |||| ||||||| ||| | |||||  || |||||||    
T  46162 acattatcaaatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagaaacaacaacatccattgatcatgaaacttatcacaa 46261  T
Q  187 ttcaacaacaacata 201  Q
    || ||||||||||||    
T  46262 tttaacaacaacata 46276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 40660 - 40765
Alignment:
Q  93 atcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaa 191  Q
    ||||| |||||| |||||| ||||||| | |||||||||||||||||||||| |||| ||||| ||||||| ||| | |||||  || ||||||||  ||    
T  40660 atcaaatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatccattgatcatgaaacttatcacaatgtaa 40759  T
Q  192 caacaa 197  Q
    ||||||    
T  40760 caacaa 40765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 14095 - 14140
Alignment:
Q  149 acaacatcaacatcaattaaacatgattctcatcacaattcaacaa 194  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  14095 acaacaacaacatcaattaaacatgattctcatcacaattcaacaa 14140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 89 - 201
Target Start/End: Complemental strand, 2565 - 2452
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    |||||||||  ||||| |||||| | ||||| | ||||||||||| |||||| ||| ||||  |||| ||||||||||| ||||||| ||| |||| |||    
T  2565 catcatcaaaacatgaattatgaacgcccaagccatgaatcatcatcaacaacatcacttaggaacaacaacatcaattgaacatgagtcttatcataat 2466  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  2465 tcaacaacaacata 2452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 70555 - 70446
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| |||||||||| ||||||  |||||| | | |||||||||||||||| ||| |||| ||| | ||||||||||| |||||| | ||||||| |||    
T  70555 catcaccaattcatgaattatgaatacccaagccaagaatcatcaacaacaacatcacttagcaataacaacatcaattgaacatggtcctcatcataat 70456  T
Q  188 tcaacaacaa 197  Q
    ||||||||||    
T  70455 tcaacaacaa 70446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 51390 - 51333
Alignment:
Q  144 tcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||| |||| |||||    
T  51390 tcttaaccacaacaacatcaattaaacatgattctcatcacaattcatcaaccacata 51333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 35476 - 35589
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| ||| |||||| ||||||  |||||| | |||||||||||||||||| ||| |||| |||||  |||||||||| ||||||| ||| | |||| |    
T  35476 catcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaacaaaaacatcaattgaacatgactcttaccacatt 35575  T
Q  188 tcaacaacaacata 201  Q
    ||||||||||||||    
T  35576 tcaacaacaacata 35589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 201
Target Start/End: Complemental strand, 1794 - 1682
Alignment:
Q  91 tcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaa-caacatcaacatcaattaaacatgattctcatcacaatt 188  Q
    ||||||| |||||| ||||||  |||||| | ||||||||||||||||||||| ||| |  ||||| |||| |||||| | |||| ||||||||| ||||    
T  1794 tcatcaaatcatgaattatgaatacccaagccatgaatcatcaacaacaatatatctaattcaacaacaacttcaattgagcatggttctcatcataatt 1695  T
Q  189 caacaacaacata 201  Q
    |||||||||||||    
T  1694 caacaacaacata 1682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 201
Target Start/End: Complemental strand, 8939 - 8827
Alignment:
Q  91 tcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaa-caacatcaacatcaattaaacatgattctcatcacaatt 188  Q
    ||||||| |||||| ||||||  |||||| | ||||||||||||||||||||| ||| |  ||||| |||| |||||| | |||| ||||||||| ||||    
T  8939 tcatcaaatcatgaattatgaatacccaagccatgaatcatcaacaacaatatatctaattcaacaacaacttcaattgagcatggttctcatcataatt 8840  T
Q  189 caacaacaacata 201  Q
    |||||||||||||    
T  8839 caacaacaacata 8827  T

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Target: scaffold0031 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 201
Target Start/End: Complemental strand, 97446 - 97334
Alignment:
Q  90 atcatcaattcatgatttatgaca-cccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaatt 188  Q
    |||||||| ||||||||||||| | |||||   ||||||||||||||| ||||||  |||  |||| ||| ||||||| ||||||| |||||||| ||||    
T  97446 atcatcaaatcatgatttatgaaaacccaaggcatgaatcatcaacaataatatcaattagtaacaacaatatcaattgaacatgaatctcatcataatt 97347  T
Q  189 caacaacaacata 201  Q
    ||||| |||||||    
T  97346 caacaccaacata 97334  T

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Target: scaffold1272 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 307 - 420
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| ||| |||||| |||||| |||||||   |||||| |||||||| || ||| |||| ||||| ||||||||||| ||||||| ||| | ||||||    
T  307 catcaacaaatcatgaattatgagcacccaaggcatgaataatcaacaaaaacatcacttagcaacaacaacatcaattgaacatgactcttaccacaat 406  T
Q  188 tcaacaacaacata 201  Q
    ||||||| ||||||    
T  407 tcaacaataacata 420  T

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Target: scaffold0095 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 33952 - 33864
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||| | |||||| || | |||||| ||| |||| ||||| ||||||||||| | ||||| ||| ||||||||||||||||||||||    
T  33952 acccaagccatgaattattatcaacaacatcacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacata 33864  T

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Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 116762 - 116687
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatca 163  Q
    ||||| ||| |||||| |||||| ||||||| | |||||||||||||||||||||| |||| ||||| ||||||||    
T  116762 catcaacaaatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatca 116687  T

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Target: scaffold0092 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 3365 - 3430
Alignment:
Q  136 acaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||| ||| |||| ||||||||||||||||| | ||||| ||| ||||||||||||| ||||||||    
T  3365 acaacatcacttagcaacatcaacatcaattgatcatgaatcttatcacaattcaactacaacata 3430  T

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Target: scaffold0335 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 5801 - 5725
Alignment:
Q  125 aatcatcaacaacaatatctcttaacaacatcaacatcaatt-aaacatgattctcatcacaattcaacaacaacat 200  Q
    |||||| |||||||| || ||| | ||||| ||||||||||| |||| ||||||||| | |||||||||||||||||    
T  5801 aatcataaacaacaacatttctcagcaacaacaacatcaattgaaacttgattctcacctcaattcaacaacaacat 5725  T

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Target: scaffold0173 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 200
Target Start/End: Original strand, 5256 - 5332
Alignment:
Q  125 aatcatcaacaacaatatctcttaacaacatcaacatcaattaaa-catgattctcatcacaattcaacaacaacat 200  Q
    |||||| |||||||| || ||| | ||||| |||||||||||||| | ||||||||| | |||||||||||||||||    
T  5256 aatcataaacaacaacatgtctcagcaacaacaacatcaattaaatcttgattctcacctcaattcaacaacaacat 5332  T

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Target: scaffold0480 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 9097 - 9018
Alignment:
Q  122 atgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||| |||| |||||| ||| |||| ||||| ||||||||||| | |||||  || ||||||||| ||||||||||||    
T  9097 atgaattatcatcaacaacatcacttagcaacaacaacatcaattgatcatgaaacttatcacaatttaacaacaacata 9018  T

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Target: scaffold0075 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 4939 - 5050
Alignment:
Q  89 catcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| ||| |||||| |||||| || |||| | |||||| |||| |||||| ||  |||| ||||| ||||||||||| | |||||  || ||||||||    
T  4939 catcagcaaatcatgaattatgaacaaccaagccatgaattatcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaacttatcacaat 5038  T
Q  188 tcaacaacaaca 199  Q
    ||||||||||||    
T  5039 tcaacaacaaca 5050  T

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Target: scaffold0029 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 50095 - 49992
Alignment:
Q  99 tcatgatttatga-cacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaatt-aaacatgattctcatcacaattcaacaaca 196  Q
    ||||||| ||||| ||||||| | || |||||| |||||||| || ||| | ||||| ||||||||||| |||| ||||||||| | ||||||||| |||    
T  50095 tcatgatatatgaacacccaagccataaatcataaacaacaacatatctcagcaacaacaacatcaattgaaacttgattctcacctcaattcaaccaca 49996  T
Q  197 acat 200  Q
    ||||    
T  49995 acat 49992  T

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Target: scaffold0483 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 6659 - 6765
Alignment:
Q  89 catcatcaattcatgatttatgac-acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaat 187  Q
    ||||| ||| |||||| ||||||| |||||| | ||||||||||||||| || ||| ||||  |  | ||||||||||| ||||||| ||| | ||||||    
T  6659 catcaacaaatcatgaattatgaccacccaagccatgaatcatcaacaaaaacatcacttaggagtaacaacatcaattgaacatgactcttaccacaat 6758  T
Q  188 tcaacaa 194  Q
    |||||||    
T  6759 tcaacaa 6765  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 198
Target Start/End: Complemental strand, 132474 - 132389
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaac 198  Q
    |||||| | |||||| |||| |||||| ||  |||||||||| ||||||||||| | |||||  || ||||||||||| |||||||    
T  132474 acccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaac 132389  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 85355 - 85440
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaac 198  Q
    |||||||| |||||| |||| |||||| ||  |||| ||||| ||||||||||| | |||||  || ||||||||||| |||||||    
T  85355 acccaaaccatgaattatcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaac 85440  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 147550 - 147611
Alignment:
Q  88 acatcatcaattcatgatttatga-cacccaaactatgaatcatcaacaacaatatctctta 148  Q
    |||||||||| |||||  |||||| ||||||| | |||||||||||||||||||||| ||||    
T  147550 acatcatcaaatcatggattatgaacacccaagccatgaatcatcaacaacaatatcactta 147611  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 270734 - 270771
Alignment:
Q  236 taaaccaggatcaaatctatggaagcattggtttatac 273  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  270734 taaaccacgatcgaatctatggaagcattggtttatac 270771  T

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Target: scaffold1278 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1278
Description:

Target: scaffold1278; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 1417 - 1469
Alignment:
Q  111 acacccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatca 163  Q
    ||||||||  |||||||||||||||||||  |||| |||||||| ||||||||    
T  1417 acacccaaggtatgaatcatcaacaacaacctctcctaacaacaacaacatca 1469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 800 - 712
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||| | |||||| |||| |||||| ||  |||| ||||| ||||||||||| | |||||  || ||||||||||| ||||||||||    
T  800 acccaagccatgaattatcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacata 712  T

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Target: scaffold0120 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 21535 - 21623
Alignment:
Q  113 acccaaactatgaatcatcaacaacaatatctcttaacaacatcaacatcaattaaacatgattctcatcacaattcaacaacaacata 201  Q
    |||||| | |||||| |||| |||||| ||  |||| ||||| ||||||||| ||| |||||  || ||||||||||| ||||||||||    
T  21535 acccaagccatgaattatcatcaacaacatgacttagcaacaacaacatcaaataatcatgaaacttatcacaattcatcaacaacata 21623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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