View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0908_low_69 (Length: 348)

Name: NF0908_low_69
Description: NF0908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0908_low_69
NF0908_low_69
[»] chr1 (37 HSPs)
chr1 (15-319)||(50263222-50263528)
chr1 (172-221)||(35473953-35474002)
chr1 (179-218)||(9872119-9872158)
chr1 (172-219)||(47719120-47719167)
chr1 (172-222)||(8253740-8253790)
chr1 (172-217)||(13794523-13794568)
chr1 (172-217)||(17283952-17283997)
chr1 (174-219)||(34486074-34486119)
chr1 (172-217)||(38448881-38448926)
chr1 (172-217)||(48730654-48730699)
chr1 (185-221)||(45418074-45418110)
chr1 (170-217)||(27127223-27127270)
chr1 (172-215)||(34733401-34733444)
chr1 (172-219)||(34808576-34808623)
chr1 (174-217)||(50638931-50638974)
chr1 (179-217)||(10843336-10843374)
chr1 (181-215)||(24631849-24631883)
chr1 (181-215)||(40618920-40618954)
chr1 (180-218)||(42416812-42416850)
chr1 (172-222)||(45140016-45140066)
chr1 (179-217)||(51509651-51509689)
chr1 (172-217)||(5907800-5907845)
chr1 (181-218)||(19396205-19396242)
chr1 (172-217)||(19620577-19620622)
chr1 (172-217)||(21400038-21400083)
chr1 (172-217)||(28039875-28039920)
chr1 (172-217)||(29800534-29800579)
chr1 (170-219)||(30548104-30548153)
chr1 (172-217)||(37045161-37045206)
chr1 (172-217)||(41763170-41763215)
chr1 (172-217)||(41926823-41926868)
chr1 (172-217)||(42045387-42045432)
chr1 (172-217)||(47528462-47528507)
chr1 (172-217)||(49875614-49875659)
chr1 (172-217)||(52441526-52441571)
chr1 (179-219)||(24124843-24124883)
chr1 (179-215)||(51370581-51370617)
[»] chr5 (26 HSPs)
chr5 (172-219)||(27679499-27679546)
chr5 (172-218)||(19068453-19068499)
chr5 (172-218)||(36321508-36321554)
chr5 (172-217)||(16133080-16133125)
chr5 (172-221)||(43108570-43108619)
chr5 (172-220)||(31545872-31545920)
chr5 (181-217)||(42005115-42005151)
chr5 (179-218)||(11844452-11844491)
chr5 (170-217)||(26655463-26655510)
chr5 (170-217)||(26927048-26927095)
chr5 (179-217)||(11017184-11017222)
chr5 (179-221)||(13409436-13409478)
chr5 (172-218)||(20370144-20370190)
chr5 (181-219)||(34206237-34206275)
chr5 (172-217)||(3445262-3445307)
chr5 (172-217)||(6489008-6489053)
chr5 (181-218)||(11647207-11647244)
chr5 (172-217)||(15889412-15889457)
chr5 (172-217)||(18391601-18391646)
chr5 (172-217)||(22498943-22498988)
chr5 (181-214)||(31198719-31198752)
chr5 (172-217)||(37932331-37932376)
chr5 (172-217)||(39980509-39980554)
chr5 (179-219)||(1808606-1808646)
chr5 (181-217)||(20258555-20258591)
chr5 (172-216)||(34436852-34436896)
[»] chr4 (45 HSPs)
chr4 (172-217)||(38416058-38416103)
chr4 (170-230)||(12439663-12439723)
chr4 (169-217)||(46676513-46676561)
chr4 (169-220)||(12058317-12058368)
chr4 (168-215)||(22279537-22279584)
chr4 (172-217)||(6087748-6087793)
chr4 (172-217)||(7230281-7230326)
chr4 (172-217)||(50442762-50442807)
chr4 (179-215)||(8027414-8027450)
chr4 (172-220)||(43027293-43027341)
chr4 (170-217)||(11949778-11949825)
chr4 (181-230)||(24488432-24488482)
chr4 (179-217)||(34247448-34247486)
chr4 (179-217)||(43782320-43782358)
chr4 (179-217)||(49949342-49949380)
chr4 (179-217)||(53190303-53190341)
chr4 (179-217)||(56551607-56551645)
chr4 (172-217)||(2186348-2186393)
chr4 (172-217)||(6789441-6789486)
chr4 (172-217)||(17216144-17216189)
chr4 (179-220)||(17728090-17728131)
chr4 (172-217)||(19908693-19908738)
chr4 (172-217)||(20383489-20383534)
chr4 (172-217)||(20799409-20799454)
chr4 (179-220)||(20921854-20921895)
chr4 (172-217)||(21317353-21317398)
chr4 (172-221)||(23809950-23809999)
chr4 (172-217)||(24665006-24665051)
chr4 (172-217)||(24785477-24785522)
chr4 (172-217)||(24822744-24822789)
chr4 (172-217)||(29908057-29908102)
chr4 (172-217)||(31780746-31780791)
chr4 (172-220)||(34670030-34670079)
chr4 (172-217)||(36203237-36203282)
chr4 (172-217)||(44815942-44815987)
chr4 (172-217)||(49473646-49473691)
chr4 (172-217)||(50362154-50362199)
chr4 (172-217)||(52270045-52270090)
chr4 (172-221)||(55421580-55421629)
chr4 (172-217)||(56497623-56497668)
chr4 (181-217)||(20096285-20096321)
chr4 (179-219)||(28435261-28435301)
chr4 (179-219)||(42756119-42756159)
chr4 (181-221)||(46409492-46409532)
chr4 (181-217)||(56204957-56204993)
[»] chr3 (37 HSPs)
chr3 (172-217)||(48315039-48315084)
chr3 (172-220)||(16980366-16980414)
chr3 (172-219)||(52119377-52119424)
chr3 (172-218)||(48376836-48376882)
chr3 (172-217)||(1149084-1149129)
chr3 (174-219)||(10926472-10926517)
chr3 (170-219)||(29631185-29631234)
chr3 (179-219)||(2662100-2662140)
chr3 (167-215)||(8113579-8113627)
chr3 (169-217)||(21914086-21914134)
chr3 (172-215)||(7974529-7974572)
chr3 (172-219)||(47099048-47099095)
chr3 (171-218)||(50570203-50570250)
chr3 (179-218)||(54230113-54230152)
chr3 (172-218)||(5702192-5702237)
chr3 (172-218)||(30200827-30200873)
chr3 (179-217)||(35191832-35191870)
chr3 (181-219)||(48417880-48417918)
chr3 (172-217)||(10498710-10498755)
chr3 (172-217)||(13800668-13800713)
chr3 (172-217)||(18870740-18870785)
chr3 (172-217)||(21513289-21513334)
chr3 (172-217)||(37465361-37465406)
chr3 (172-217)||(46469278-46469323)
chr3 (172-217)||(53207971-53208016)
chr3 (172-217)||(53633632-53633677)
chr3 (172-217)||(53996300-53996345)
chr3 (184-217)||(54584046-54584079)
chr3 (172-213)||(55066619-55066660)
chr3 (198-230)||(2106778-2106810)
chr3 (182-218)||(10594688-10594724)
chr3 (182-218)||(14741805-14741841)
chr3 (181-217)||(16663251-16663287)
chr3 (169-217)||(25505716-25505764)
chr3 (172-220)||(28148480-28148528)
chr3 (169-217)||(45096024-45096072)
chr3 (174-218)||(45254234-45254278)
[»] chr2 (43 HSPs)
chr2 (169-217)||(40099398-40099446)
chr2 (172-219)||(20120734-20120781)
chr2 (163-217)||(15654884-15654938)
chr2 (172-218)||(18231487-18231533)
chr2 (172-217)||(13000686-13000731)
chr2 (172-217)||(19179065-19179110)
chr2 (172-217)||(24593377-24593422)
chr2 (179-230)||(12231885-12231937)
chr2 (182-230)||(19095130-19095178)
chr2 (172-219)||(10156018-10156065)
chr2 (170-221)||(11560497-11560548)
chr2 (174-217)||(12124687-12124730)
chr2 (172-219)||(26133533-26133580)
chr2 (172-219)||(37320530-37320577)
chr2 (172-218)||(4897544-4897590)
chr2 (172-218)||(4944938-4944984)
chr2 (167-217)||(7413204-7413254)
chr2 (172-218)||(9383223-9383269)
chr2 (179-217)||(12124553-12124591)
chr2 (179-217)||(21482534-21482572)
chr2 (179-217)||(35685076-35685114)
chr2 (172-214)||(36547253-36547295)
chr2 (179-217)||(43117205-43117243)
chr2 (176-217)||(833084-833125)
chr2 (179-224)||(3197087-3197132)
chr2 (172-217)||(4056791-4056836)
chr2 (170-219)||(5168592-5168641)
chr2 (172-217)||(7206126-7206171)
chr2 (174-215)||(12619347-12619388)
chr2 (172-217)||(20565090-20565135)
chr2 (172-217)||(22608528-22608573)
chr2 (172-217)||(24393246-24393291)
chr2 (181-218)||(26400761-26400798)
chr2 (172-217)||(27152354-27152399)
chr2 (172-217)||(31543013-31543058)
chr2 (172-216)||(5676740-5676784)
chr2 (181-217)||(6141230-6141266)
chr2 (181-217)||(7772475-7772511)
chr2 (179-219)||(15617660-15617700)
chr2 (179-215)||(28771590-28771626)
chr2 (171-211)||(29350066-29350106)
chr2 (174-218)||(34745251-34745295)
chr2 (169-217)||(34903515-34903563)
[»] chr8 (28 HSPs)
chr8 (172-215)||(23816791-23816834)
chr8 (185-230)||(1200346-1200392)
chr8 (172-217)||(17704014-17704059)
chr8 (172-217)||(19778066-19778111)
chr8 (172-217)||(30623294-30623339)
chr8 (172-217)||(33451364-33451409)
chr8 (170-217)||(9656012-9656059)
chr8 (170-217)||(37938745-37938792)
chr8 (177-219)||(5179799-5179841)
chr8 (172-218)||(22847471-22847517)
chr8 (179-217)||(42208484-42208522)
chr8 (169-218)||(8984508-8984557)
chr8 (174-219)||(9635066-9635111)
chr8 (172-217)||(11708987-11709032)
chr8 (167-224)||(15079160-15079217)
chr8 (172-217)||(15438454-15438499)
chr8 (172-217)||(15529758-15529803)
chr8 (172-213)||(18942919-18942960)
chr8 (172-217)||(27587222-27587267)
chr8 (172-217)||(27750919-27750964)
chr8 (172-217)||(28219864-28219909)
chr8 (172-217)||(29186503-29186548)
chr8 (172-217)||(30427732-30427777)
chr8 (172-217)||(37015851-37015896)
chr8 (172-217)||(37999435-37999480)
chr8 (172-217)||(39821885-39821930)
chr8 (181-217)||(8442502-8442538)
chr8 (179-219)||(8717488-8717528)
[»] scaffold0026 (1 HSPs)
scaffold0026 (172-217)||(75326-75371)
[»] scaffold0007 (1 HSPs)
scaffold0007 (172-217)||(1572-1617)
[»] chr7 (26 HSPs)
chr7 (172-217)||(8615024-8615069)
chr7 (172-217)||(21050237-21050282)
chr7 (172-217)||(46987087-46987132)
chr7 (174-217)||(18714451-18714494)
chr7 (172-219)||(21105604-21105651)
chr7 (172-215)||(24991782-24991825)
chr7 (179-218)||(34568347-34568386)
chr7 (172-214)||(5833043-5833085)
chr7 (179-217)||(7872763-7872801)
chr7 (172-218)||(13044156-13044202)
chr7 (172-218)||(22690050-22690096)
chr7 (172-214)||(26816682-26816724)
chr7 (180-217)||(2618688-2618725)
chr7 (186-219)||(2962739-2962772)
chr7 (172-221)||(4047787-4047835)
chr7 (172-217)||(10244728-10244773)
chr7 (172-217)||(21322176-21322221)
chr7 (172-217)||(25888901-25888946)
chr7 (172-217)||(30296334-30296379)
chr7 (172-217)||(37230043-37230088)
chr7 (172-217)||(37864426-37864471)
chr7 (172-217)||(40762222-40762267)
chr7 (172-217)||(41029273-41029318)
chr7 (181-218)||(44941427-44941464)
chr7 (172-217)||(48007562-48007607)
chr7 (179-215)||(4340135-4340171)
[»] chr6 (14 HSPs)
chr6 (172-217)||(655764-655809)
chr6 (172-219)||(788867-788914)
chr6 (172-219)||(32053789-32053836)
chr6 (167-217)||(4450258-4450308)
chr6 (172-217)||(8810641-8810686)
chr6 (172-217)||(18254116-18254161)
chr6 (172-217)||(18256884-18256929)
chr6 (172-217)||(20744139-20744184)
chr6 (172-217)||(30370165-30370210)
chr6 (172-217)||(30960068-30960113)
chr6 (173-217)||(334142-334186)
chr6 (172-216)||(10780123-10780167)
chr6 (179-219)||(14441468-14441508)
chr6 (181-217)||(31971539-31971575)
[»] scaffold0004 (1 HSPs)
scaffold0004 (172-215)||(91579-91622)
[»] scaffold0118 (1 HSPs)
scaffold0118 (172-218)||(39999-40045)
[»] scaffold0896 (1 HSPs)
scaffold0896 (172-217)||(3142-3187)
[»] scaffold0238 (1 HSPs)
scaffold0238 (172-217)||(25390-25435)
[»] scaffold0126 (1 HSPs)
scaffold0126 (172-217)||(34903-34948)
[»] scaffold0044 (1 HSPs)
scaffold0044 (172-217)||(42349-42394)


Alignment Details
Target: chr1 (Bit Score: 221; Significance: 1e-121; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 15 - 319
Target Start/End: Original strand, 50263222 - 50263528
Alignment:
Q  15 tatattttggaaataagtgcacagattcatggaatggaatcctactaaatgtnnnnnnn-caaaatcaatagctataatgttatgaacacaattttcttc 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||    
T  50263222 tatattttggaaataagtgcacagattcatggaatggaatcctactaaatgtaaaaaaaacaaaatcaatagctataatgttatgaacacaattttcttc 50263321  T
Q  114 aatatttacattgaccaagagtccaatatgtacaccca-acatttaaacatttgttccatgagctcagctcagttggtaacgataatgcataatatatgc 212  Q
     ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  50263322 gatatttacattgaccaagagtccaatatgcacacccagacatttaaacatttgtttcatgagcttagctcagttggtaacgataatgcataatatatgc 50263421  T
Q  213 aaggttcagatttgaaccacagacactaccnnnnnnngatatttaaacattaatcaagatcaaataaaaactgagaatcaaaacccatgaatgatttgac 312  Q
    |||||||||||||||||  ||||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50263422 aaggttcagatttgaacaccagacaccaccaaaaaaagatatttaaacattaatcaagatcaaataaaaactgagaatcaaaacccatgaatgatttgac 50263521  T
Q  313 acaatcc 319  Q
    |||||||    
T  50263522 acaatcc 50263528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 35473953 - 35474002
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttcag 221  Q
    |||||| |||||| ||||||| ||||||||||||||||||||||||||||    
T  35473953 tgagcttagctcaattggtaaggataatgcataatatatgcaaggttcag 35474002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 9872158 - 9872119
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  9872158 agctcagttggtaaggataatgcataatatatgcaaggtt 9872119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 47719167 - 47719120
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||    
T  47719167 tgagcttaactcagttggtaaggataatgcataatatatgcaaggttc 47719120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 8253740 - 8253790
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttcaga 222  Q
    |||||| |||||||||||||  || ||||||||||||||||||||||||||    
T  8253740 tgagcttagctcagttggtatggacaatgcataatatatgcaaggttcaga 8253790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 13794568 - 13794523
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||| ||| ||||||||||||||||||||||||    
T  13794568 tgagcttagctcagttgataaggataatgcataatatatgcaaggt 13794523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 17283952 - 17283997
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||||||||||||||||||||    
T  17283952 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 17283997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 34486074 - 34486119
Alignment:
Q  174 agctcagctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    ||||||||||||||||||| || | |||||||||||||||||||||    
T  34486074 agctcagctcagttggtaatgacagtgcataatatatgcaaggttc 34486119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 38448926 - 38448881
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||||||||||||||||||||    
T  38448926 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 38448881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 48730699 - 48730654
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||    
T  48730699 tgagctcagctcagttggtaaggacaatgcataataaatgcaaggt 48730654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 45418110 - 45418074
Alignment:
Q  185 gttggtaacgataatgcataatatatgcaaggttcag 221  Q
    |||||||| ||||||||||||||||||||||||||||    
T  45418110 gttggtaaggataatgcataatatatgcaaggttcag 45418074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 27127223 - 27127270
Alignment:
Q  170 catgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||| ||||||||| |||| ||||||||||||||||| ||||||    
T  27127223 catgagcttagctcagttagtaaggataatgcataatatatacaaggt 27127270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 34733401 - 34733444
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaag 215  Q
    |||||| |||||||||||||| || |||||||||||||||||||    
T  34733401 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 34733444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 34808623 - 34808576
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||| |||||||||| ||| || |||||||||||||||||||||||    
T  34808623 tgagcttagctcagttgttaaggacaatgcataatatatgcaaggttc 34808576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 50638974 - 50638931
Alignment:
Q  174 agctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||| |||||||||||||| || |||||||||||||||||||||    
T  50638974 agcttagctcagttggtaaggacaatgcataatatatgcaaggt 50638931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 10843374 - 10843336
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  10843374 agctcagttgataaggataatgcataatatatgcaaggt 10843336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 24631849 - 24631883
Alignment:
Q  181 ctcagttggtaacgataatgcataatatatgcaag 215  Q
    |||||||||||| ||||||||||||||||||||||    
T  24631849 ctcagttggtaaggataatgcataatatatgcaag 24631883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 40618920 - 40618954
Alignment:
Q  181 ctcagttggtaacgataatgcataatatatgcaag 215  Q
    |||||||||||| ||||||||||||||||||||||    
T  40618920 ctcagttggtaaagataatgcataatatatgcaag 40618954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 218
Target Start/End: Original strand, 42416812 - 42416850
Alignment:
Q  180 gctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    ||||||||| ||| |||||||||||||||||||||||||    
T  42416812 gctcagttgataaggataatgcataatatatgcaaggtt 42416850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 45140066 - 45140016
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttcaga 222  Q
    |||||| |||||||||||||  || ||||||||||||||||||||| ||||    
T  45140066 tgagcttagctcagttggtatggacaatgcataatatatgcaaggtccaga 45140016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 51509651 - 51509689
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  51509651 agctcagttggtaacgattatgcataatatacgcaaggt 51509689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 5907800 - 5907845
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| ||||||||||| || || |||||||||||||||||||||    
T  5907800 tgagcttagctcagttggcaaggacaatgcataatatatgcaaggt 5907845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 19396242 - 19396205
Alignment:
Q  181 ctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||||||||  |||||||||||||||||||||||||    
T  19396242 ctcagttggtagggataatgcataatatatgcaaggtt 19396205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 19620577 - 19620622
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || ||| |||||||||||||||||    
T  19620577 tgagcttagctcagttggtaaggacaatacataatatatgcaaggt 19620622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 21400083 - 21400038
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  21400083 tgagcttagctcagttggtagggacaatgcataatatatgcaaggt 21400038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 28039920 - 28039875
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| | |||||||||||| || |||||||||||||||||||||    
T  28039920 tgagcttaactcagttggtaaggacaatgcataatatatgcaaggt 28039875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 29800534 - 29800579
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| | |||||||||||| |||||||||||| |||||||||||    
T  29800534 tgagcttaactcagttggtaaggataatgcataaaatatgcaaggt 29800579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 30548153 - 30548104
Alignment:
Q  170 catgagctcagctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||||| | || ||||||||| || |||||||||||||||||||||||    
T  30548153 catgagcttaacttagttggtaaggacaatgcataatatatgcaaggttc 30548104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 37045206 - 37045161
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    ||||||||||||||||||||   | |||||||||||||||||||||    
T  37045206 tgagctcagctcagttggtaggaacaatgcataatatatgcaaggt 37045161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 41763215 - 41763170
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  |||||||||||| |||||||||||    
T  41763215 tgagcttagctcagttggtagggataatgcataaaatatgcaaggt 41763170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 41926823 - 41926868
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || ||||||||||||||| |||||    
T  41926823 tgagcttagctcagttggtaaggacaatgcataatatatgtaaggt 41926868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 42045432 - 42045387
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  42045432 tgagcttagctcagttggtatggacaatgcataatatatgcaaggt 42045387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 47528507 - 47528462
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || ||||||||||||| |||||||    
T  47528507 tgagcttagctcagttggtaaggacaatgcataatatacgcaaggt 47528462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 49875659 - 49875614
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| | |||||||||||| || |||||||||||||||||||||    
T  49875659 tgagcttaactcagttggtaaggacaatgcataatatatgcaaggt 49875614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 52441571 - 52441526
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  52441571 tgagcttagctcagttggtatagacaatgcataatatatgcaaggt 52441526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 24124883 - 24124843
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||||||| ||| || |||||||||||||||||||||||    
T  24124883 agctcagttgttaaggacaatgcataatatatgcaaggttc 24124843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 51370581 - 51370617
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaag 215  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  51370581 agctcagttggtaaggatgatgcataatatatgcaag 51370617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 27679499 - 27679546
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||    
T  27679499 tgagcttagctcagttggtaaagataatgcataatatatgcaaggttc 27679546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 19068499 - 19068453
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||| |||||||||||||  |||||||||||||||||||||||||    
T  19068499 tgagcttagctcagttggtatggataatgcataatatatgcaaggtt 19068453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 36321554 - 36321508
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||| |||||||||||||| || ||||||||||||||||||||||    
T  36321554 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggtt 36321508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 16133125 - 16133080
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||||||||||||||||||||    
T  16133125 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 16133080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 43108570 - 43108619
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttcag 221  Q
    |||||| | |||||||||||| || |||||||||||||||||||||||||    
T  43108570 tgagcttaactcagttggtaaggacaatgcataatatatgcaaggttcag 43108619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 31545872 - 31545920
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttca 220  Q
    |||||| | |||||||||| | |||||||||||||||||||||||||||    
T  31545872 tgagcttaactcagttggttaggataatgcataatatatgcaaggttca 31545920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 42005115 - 42005151
Alignment:
Q  181 ctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    ||||||||||||||| |||||||||||||||||||||    
T  42005115 ctcagttggtaacgaaaatgcataatatatgcaaggt 42005151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 11844491 - 11844452
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||||||||||| || ||||||||||||||||||||||    
T  11844491 agctcagttggtaaggacaatgcataatatatgcaaggtt 11844452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 26655463 - 26655510
Alignment:
Q  170 catgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    ||||||||||||||||||||||  || ||||||||||||||| |||||    
T  26655463 catgagctcagctcagttggtatggacaatgcataatatatgtaaggt 26655510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 26927048 - 26927095
Alignment:
Q  170 catgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    ||||||||||||||||||||||  || ||||||||||||||| |||||    
T  26927048 catgagctcagctcagttggtatggacaatgcataatatatgtaaggt 26927095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 11017184 - 11017222
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  11017184 agctcagttggtagggataatgcataatatatgcaaggt 11017222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 13409436 - 13409478
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggttcag 221  Q
    ||||||||| |||| || |||||||||||||||||||||||||    
T  13409436 agctcagttagtaaagacaatgcataatatatgcaaggttcag 13409478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 20370190 - 20370144
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||| |||||||||||||  ||||||||||||||||| |||||||    
T  20370190 tgagcttagctcagttggtagggataatgcataatatatacaaggtt 20370144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 34206237 - 34206275
Alignment:
Q  181 ctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||||||||| || |||||||||||||||||||||||    
T  34206237 ctcagttggtaaagacaatgcataatatatgcaaggttc 34206275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 3445307 - 3445262
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||||||||| ||||||||||    
T  3445307 tgagcttagctcagttggtaaggacaatgcataatgtatgcaaggt 3445262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 6489008 - 6489053
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  6489008 tgagcttagctcagttggtagggacaatgcataatatatgcaaggt 6489053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 11647207 - 11647244
Alignment:
Q  181 ctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||||||||| || ||||||||||||||||||||||    
T  11647207 ctcagttggtaaggacaatgcataatatatgcaaggtt 11647244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 15889412 - 15889457
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  15889412 tgagcttagctcagttggtagggacaatgcataatatatgcaaggt 15889457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 18391601 - 18391646
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || ||||||||| |||||||||||    
T  18391601 tgagcttagctcagttggtaaggacaatgcataaaatatgcaaggt 18391646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 22498943 - 22498988
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| | |||||||||||| || |||||||||||||||||||||    
T  22498943 tgagcttaactcagttggtaaggacaatgcataatatatgcaaggt 22498988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 214
Target Start/End: Original strand, 31198719 - 31198752
Alignment:
Q  181 ctcagttggtaacgataatgcataatatatgcaa 214  Q
    |||||||||||| |||||||||||||||||||||    
T  31198719 ctcagttggtaaggataatgcataatatatgcaa 31198752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 37932331 - 37932376
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  37932331 tgagcttagctcagttggtatggacaatgcataatatatgcaaggt 37932376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 39980509 - 39980554
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  |||||||||||| |||||||||||    
T  39980509 tgagcttagctcagttggtatggataatgcataaaatatgcaaggt 39980554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 1808646 - 1808606
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||||||||||  |||||||||||| |||||||||||||    
T  1808646 agctcagttggtatggataatgcataaaatatgcaaggttc 1808606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 20258555 - 20258591
Alignment:
Q  181 ctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||  ||||||||||||||||||||||||    
T  20258555 ctcagttggtatggataatgcataatatatgcaaggt 20258591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 34436852 - 34436896
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaagg 216  Q
    |||||| |||||||||||||  || ||||||||||||||||||||    
T  34436852 tgagcttagctcagttggtagggacaatgcataatatatgcaagg 34436896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 38416058 - 38416103
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||    
T  38416058 tgagcttagctcagttggtaaggataatgcataatatatgcaaggt 38416103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 12439663 - 12439723
Alignment:
Q  170 catgagctcagctcagttggtaacgataatgcataatatatgcaaggttcagatttgaacc 230  Q
    ||||| || |||||||||| ||| || ||||||||||||||||||||||| ||||||||||    
T  12439663 catgaacttagctcagttgataaggacaatgcataatatatgcaaggttcggatttgaacc 12439723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 46676561 - 46676513
Alignment:
Q  169 ccatgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    ||||||||| |||||||||||||| || |||||||||||||||||||||    
T  46676561 ccatgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 46676513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 12058317 - 12058368
Alignment:
Q  169 ccatgagctcagctcagttggtaacgataatgcataatatatgcaaggttca 220  Q
    ||||||| | |||||||| ||||| |||||||||||||||||||||||||||    
T  12058317 ccatgagtttagctcagtcggtaaggataatgcataatatatgcaaggttca 12058368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 22279584 - 22279537
Alignment:
Q  168 tccatgagctcagctcagttggtaacgataatgcataatatatgcaag 215  Q
    |||||||||| |||||||||||||| || |||||||||||||||||||    
T  22279584 tccatgagcttagctcagttggtaaggacaatgcataatatatgcaag 22279537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 6087748 - 6087793
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||    
T  6087748 tgagcttagctcagttggtatagataatgcataatatatgcaaggt 6087793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 7230281 - 7230326
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||||||||||||||||||||    
T  7230281 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 7230326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 50442807 - 50442762
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||    
T  50442807 tgagcttagctcagttggtagggataatgcataatatatgcaaggt 50442762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 8027450 - 8027414
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaag 215  Q
    |||||||||||||| ||||||||||||||||||||||    
T  8027450 agctcagttggtaaggataatgcataatatatgcaag 8027414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 43027293 - 43027341
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttca 220  Q
    |||||| |||||| ||||||  |||||||||||||||||||||||||||    
T  43027293 tgagcttagctcaattggtagtgataatgcataatatatgcaaggttca 43027341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 11949825 - 11949778
Alignment:
Q  170 catgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||| |||||||||||||  || |||||||||||||||||||||    
T  11949825 catgagcttagctcagttggtatggacaatgcataatatatgcaaggt 11949778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 24488432 - 24488482
Alignment:
Q  181 ctcagttggtaacgataatgcataatatatgcaaggttc-agatttgaacc 230  Q
    |||||||||||| || |||||||||||||| |||||||| |||||||||||    
T  24488432 ctcagttggtaatgacaatgcataatatatacaaggttcgagatttgaacc 24488482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 34247448 - 34247486
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||||| || |||||||||||||||||||||    
T  34247448 agctcagttggtaaggacaatgcataatatatgcaaggt 34247486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 43782358 - 43782320
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||||| || |||||||||||||||||||||    
T  43782358 agctcagttggtaatgacaatgcataatatatgcaaggt 43782320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 49949342 - 49949380
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||||| || |||||||||||||||||||||    
T  49949342 agctcagttggtaaggacaatgcataatatatgcaaggt 49949380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 53190303 - 53190341
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  53190303 agctcagttggtatggataatgcataatatatgcaaggt 53190341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 56551645 - 56551607
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||||| || |||||||||||||||||||||    
T  56551645 agctcagttggtaaggacaatgcataatatatgcaaggt 56551607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 2186393 - 2186348
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  2186393 tgagcttagctcagttggtatggacaatgcataatatatgcaaggt 2186348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 6789486 - 6789441
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||||||| ||||||||||||    
T  6789486 tgagcttagctcagttggtaaggacaatgcatagtatatgcaaggt 6789441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 17216189 - 17216144
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||| |||  |||||||||||||||||||||||    
T  17216189 tgagctaagctcagttgataagaataatgcataatatatgcaaggt 17216144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 17728090 - 17728131
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggttca 220  Q
    |||||||||||||  ||||||||||||||||||| |||||||    
T  17728090 agctcagttggtatggataatgcataatatatgctaggttca 17728131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 19908693 - 19908738
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| | |||||||||||| || |||||||||||||||||||||    
T  19908693 tgagcttaactcagttggtaaggacaatgcataatatatgcaaggt 19908738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 20383489 - 20383534
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  20383489 tgagcttagctcagttggtatggacaatgcataatatatgcaaggt 20383534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 20799454 - 20799409
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  20799454 tgagcttagctcagttggtagggacaatgcataatatatgcaaggt 20799409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 20921895 - 20921854
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggttca 220  Q
    ||||||||||| || ||||||| |||||||||||||||||||    
T  20921895 agctcagttggcaaggataatgtataatatatgcaaggttca 20921854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 21317398 - 21317353
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  21317398 tgagcttagctcagttggtagagacaatgcataatatatgcaaggt 21317353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 23809950 - 23809999
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttcag 221  Q
    |||||| |||||||||||||  || || ||||||||||||||||||||||    
T  23809950 tgagcttagctcagttggtatggacaaagcataatatatgcaaggttcag 23809999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 24665051 - 24665006
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  24665051 tgagcttagctcagttggtatggagaatgcataatatatgcaaggt 24665006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 24785522 - 24785477
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||||||||||||| ||||||    
T  24785522 tgagctaagctcagttggtaaggacaatgcataatatatacaaggt 24785477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 24822744 - 24822789
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||||||||||||| ||||||    
T  24822744 tgagctaagctcagttggtaaggacaatgcataatatatacaaggt 24822789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 29908057 - 29908102
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| | |||||||||||| || |||||||||||||||||||||    
T  29908057 tgagcttaactcagttggtaaggacaatgcataatatatgcaaggt 29908102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 31780746 - 31780791
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || ||||||||| |||||||||||    
T  31780746 tgagcttagctcagttggtaaggacaatgcataaaatatgcaaggt 31780791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 34670030 - 34670079
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataa-tatatgcaaggttca 220  Q
    ||||||||||||||||||||  || ||||||||| |||||||||||||||    
T  34670030 tgagctcagctcagttggtagggacaatgcataattatatgcaaggttca 34670079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 36203237 - 36203282
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||| ||| || |||||||||||||||||||||    
T  36203237 tgagcttagctcagttgataaggacaatgcataatatatgcaaggt 36203282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 44815942 - 44815987
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||  | ||||||||||||||||||||||||    
T  44815942 tgagctaagctcagttggataggataatgcataatatatgcaaggt 44815987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 49473646 - 49473691
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| ||| |||||||||| || |||||||||||||||||||||    
T  49473646 tgagcttagcccagttggtaaggacaatgcataatatatgcaaggt 49473691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 50362199 - 50362154
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  50362199 tgagcttagctcagttggtagggacaatgcataatatatgcaaggt 50362154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 52270090 - 52270045
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  52270090 tgagcttagctcagttggtatggacaatgcataatatatgcaaggt 52270045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 55421629 - 55421580
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttcag 221  Q
    |||||| ||||||||||||   || |||||||||||||||||||||||||    
T  55421629 tgagcttagctcagttggtttggacaatgcataatatatgcaaggttcag 55421580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 56497668 - 56497623
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||| ||||||| || |||||||||||||||||||||    
T  56497668 tgagcttagctcaattggtaaggacaatgcataatatatgcaaggt 56497623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 20096321 - 20096285
Alignment:
Q  181 ctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||  ||||||||||||||||||||||||    
T  20096321 ctcagttggtagggataatgcataatatatgcaaggt 20096285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 28435301 - 28435261
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||||||||||  || |||||||||||||||||||||||    
T  28435301 agctcagttggtatggacaatgcataatatatgcaaggttc 28435261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 42756159 - 42756119
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||||||| ||| || |||||||||||||||||||||||    
T  42756159 agctcagttgataaggacaatgcataatatatgcaaggttc 42756119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 46409532 - 46409492
Alignment:
Q  181 ctcagttggtaacgataatgcataatatatgcaaggttcag 221  Q
    |||||||||||| || |||||||||||||||||| ||||||    
T  46409532 ctcagttggtaaagacaatgcataatatatgcaaagttcag 46409492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 56204957 - 56204993
Alignment:
Q  181 ctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||| || |||||||||||||||||||||    
T  56204957 ctcagttggtaaggacaatgcataatatatgcaaggt 56204993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 48315084 - 48315039
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||    
T  48315084 tgagcttagctcagttggtaaggataatgcataatatatgcaaggt 48315039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 16980414 - 16980366
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttca 220  Q
    |||||| |||||||||||||| || ||||||||||||||||||||||||    
T  16980414 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggttca 16980366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 52119377 - 52119424
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||| |||||||||||||| || |||||||||||||||||||||||    
T  52119377 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggttc 52119424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 48376836 - 48376882
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||| |||||||||||||| |||||||||||||||||| ||||||    
T  48376836 tgagcttagctcagttggtaaagataatgcataatatatgtaaggtt 48376882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 1149129 - 1149084
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||||||||||||||||||||    
T  1149129 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 1149084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 10926472 - 10926517
Alignment:
Q  174 agctcagctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||| |||||||||||||| || |||||||||||||||||||||||    
T  10926472 agcttagctcagttggtaaggacaatgcataatatatgcaaggttc 10926517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 29631185 - 29631234
Alignment:
Q  170 catgagctcagctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||||| |||||||||||||  || |||||||||||||||||||||||    
T  29631185 catgagcttagctcagttggtatggacaatgcataatatatgcaaggttc 29631234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 2662100 - 2662140
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  2662100 agctcagttggtaaagacaatgcataatatatgcaaggttc 2662140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 8113627 - 8113579
Alignment:
Q  167 ttccatgagctcagctcagttggtaacgataatgcataatatatgcaag 215  Q
    |||| |||||| |||||||||||||| || |||||||||||||||||||    
T  8113627 ttccgtgagcttagctcagttggtaaggacaatgcataatatatgcaag 8113579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 21914134 - 21914086
Alignment:
Q  169 ccatgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    ||||||||| | |||||||||||| || |||||||||||||||||||||    
T  21914134 ccatgagcttaactcagttggtaaggacaatgcataatatatgcaaggt 21914086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 7974572 - 7974529
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaag 215  Q
    |||||| |||||||||||||  ||||||||||||||||||||||    
T  7974572 tgagcttagctcagttggtatggataatgcataatatatgcaag 7974529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 47099095 - 47099048
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||| |||||||||| |||  |||||||||||||||||||||||||    
T  47099095 tgagcttagctcagttgataagaataatgcataatatatgcaaggttc 47099048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 50570250 - 50570203
Alignment:
Q  171 atgagctcagctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    ||||||| |||||||||||||  || ||||||||||||||||||||||    
T  50570250 atgagcttagctcagttggtatagacaatgcataatatatgcaaggtt 50570203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 54230152 - 54230113
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||||||||||| || ||||||||||||||||||||||    
T  54230152 agctcagttggtaaggacaatgcataatatatgcaaggtt 54230113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 5702237 - 5702192
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||| |||||||||||||| || ||||||||||||||||||||||    
T  5702237 tgagcttagctcagttggtaa-gacaatgcataatatatgcaaggtt 5702192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 30200827 - 30200873
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||| |||||||||| ||| || ||||||||||||||||||||||    
T  30200827 tgagcttagctcagttgctaaggacaatgcataatatatgcaaggtt 30200873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 35191870 - 35191832
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||||| || |||||||||||||||||||||    
T  35191870 agctcagttggtaaggacaatgcataatatatgcaaggt 35191832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 48417918 - 48417880
Alignment:
Q  181 ctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  48417918 ctcagttggtaaatataatgcataatatatgcaaggttc 48417880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 10498755 - 10498710
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  10498755 tgagcttagctcagttggtatggacaatgcataatatatgcaaggt 10498710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 13800668 - 13800713
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| ||||||||||||||  | |||||||||||||||||||||    
T  13800668 tgagcttagctcagttggtaagaacaatgcataatatatgcaaggt 13800713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 18870785 - 18870740
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  18870785 tgagcttagctcagttggtagggacaatgcataatatatgcaaggt 18870740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 21513289 - 21513334
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||||||||| ||||||||||    
T  21513289 tgagcttagctcagttggtaaggacaatgcataatttatgcaaggt 21513334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 37465361 - 37465406
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| | ||||||| |||||||||||| ||||||||||||||||    
T  37465361 tgagcttaactcagtttgtaacgataatgtataatatatgcaaggt 37465406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 46469278 - 46469323
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||||||||||||| ||||||    
T  46469278 tgagcttagctcagttggtaaggacaatgcataatatattcaaggt 46469323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 53207971 - 53208016
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| |  |||||||||||||||||||||    
T  53207971 tgagcttagctcagttggtaagggcaatgcataatatatgcaaggt 53208016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 53633677 - 53633632
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| | |||||||||||| |||||||||||||||||| |||||    
T  53633677 tgagcttaactcagttggtaaggataatgcataatatatgtaaggt 53633632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 53996300 - 53996345
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  53996300 tgagcttagctcagttggtatggacaatgcataatatatgcaaggt 53996345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 54584046 - 54584079
Alignment:
Q  184 agttggtaacgataatgcataatatatgcaaggt 217  Q
    ||||||||| ||||||||||||||||||||||||    
T  54584046 agttggtaaagataatgcataatatatgcaaggt 54584079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 55066660 - 55066619
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgca 213  Q
    |||||| |||||||||||||  ||||||||||||||||||||    
T  55066660 tgagcttagctcagttggtacggataatgcataatatatgca 55066619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 230
Target Start/End: Original strand, 2106778 - 2106810
Alignment:
Q  198 atgcataatatatgcaaggttcagatttgaacc 230  Q
    |||||||||||||||||||||||||||| ||||    
T  2106778 atgcataatatatgcaaggttcagatttaaacc 2106810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 10594688 - 10594724
Alignment:
Q  182 tcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    ||||||||||| || ||||||||||||||||||||||    
T  10594688 tcagttggtaaggacaatgcataatatatgcaaggtt 10594724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 14741805 - 14741841
Alignment:
Q  182 tcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    ||||||||||| || ||||||||||||||||||||||    
T  14741805 tcagttggtaaggacaatgcataatatatgcaaggtt 14741841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 16663287 - 16663251
Alignment:
Q  181 ctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||  ||||||||||||||||||||||||    
T  16663287 ctcagttggtatggataatgcataatatatgcaaggt 16663251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 25505764 - 25505716
Alignment:
Q  169 ccatgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    ||||||||| | ||||||| |||| || |||||||||||||||||||||    
T  25505764 ccatgagcttaactcagtttgtaaggacaatgcataatatatgcaaggt 25505716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 28148528 - 28148480
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttca 220  Q
    |||||| ||||||||||||||  |||||| |||| ||||||||||||||    
T  28148528 tgagcttagctcagttggtaagaataatgtataaaatatgcaaggttca 28148480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 45096024 - 45096072
Alignment:
Q  169 ccatgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| || |||||||||| ||| || |||||||||||||||||||||    
T  45096024 ccatgaacttagctcagttgataaggacaatgcataatatatgcaaggt 45096072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 45254234 - 45254278
Alignment:
Q  174 agctcagctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||| |||||||||||||| || ||||||||||||||| ||||||    
T  45254234 agcttagctcagttggtaaggacaatgcataatatatgtaaggtt 45254278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000008; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 40099446 - 40099398
Alignment:
Q  169 ccatgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    ||||||||| |||||||||||||| || |||||||||||||||||||||    
T  40099446 ccatgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 40099398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 20120781 - 20120734
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||| |||||||||||||| || |||||||||||||||||||||||    
T  20120781 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggttc 20120734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 15654938 - 15654884
Alignment:
Q  163 tttgttccatgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    ||||| || |||||| |||||||||||||| |||||||||||| |||||||||||    
T  15654938 tttgtcccgtgagcttagctcagttggtaaggataatgcataaaatatgcaaggt 15654884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 18231533 - 18231487
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||| |||||||||||||| || ||||||||||||||||||||||    
T  18231533 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggtt 18231487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 13000686 - 13000731
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| |||||||||||||||||| |||||    
T  13000686 tgagcttagctcagttggtaaagataatgcataatatatgtaaggt 13000731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 19179110 - 19179065
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||||||||||||||||||||    
T  19179110 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 19179065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 24593377 - 24593422
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||||||||||||||||||||    
T  24593377 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 24593422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 12231885 - 12231937
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggttcaga-tttgaacc 230  Q
    ||||| |||||||| |||||||||||||||||||||||| |||| ||||||||    
T  12231885 agctctgttggtaaggataatgcataatatatgcaaggtccagagtttgaacc 12231937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 19095130 - 19095178
Alignment:
Q  182 tcagttggtaacgataatgcataatatatgcaaggttcagatttgaacc 230  Q
    ||||||||||| ||||||||| |||||||||||||||||| || |||||    
T  19095130 tcagttggtaaggataatgcagaatatatgcaaggttcaggttcgaacc 19095178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 10156018 - 10156065
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||| |||||||||||||| || ||| |||||||||||||||||||    
T  10156018 tgagcttagctcagttggtaaggacaatacataatatatgcaaggttc 10156065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 11560497 - 11560548
Alignment:
Q  170 catgagctcagctcagttggtaacgataatgcataatatatgcaaggttcag 221  Q
    |||||||| |||||| ||||||  || |||||||||||||||||||||||||    
T  11560497 catgagcttagctcaattggtagggacaatgcataatatatgcaaggttcag 11560548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 12124687 - 12124730
Alignment:
Q  174 agctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||| |||||||||||||| || |||||||||||||||||||||    
T  12124687 agcttagctcagttggtaaggacaatgcataatatatgcaaggt 12124730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 26133580 - 26133533
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||| | |||||||||||| || |||||||||||||||||||||||    
T  26133580 tgagcttaactcagttggtaaggacaatgcataatatatgcaaggttc 26133533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 37320577 - 37320530
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||| | |||||||||||| || |||||||||||||||||||||||    
T  37320577 tgagcttaactcagttggtaaagacaatgcataatatatgcaaggttc 37320530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 4897544 - 4897590
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||| | |||||||||||| || ||||||||||||||||||||||    
T  4897544 tgagcttaactcagttggtaaggacaatgcataatatatgcaaggtt 4897590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 4944938 - 4944984
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||| | |||||||||||| || ||||||||||||||||||||||    
T  4944938 tgagcttaactcagttggtaaggacaatgcataatatatgcaaggtt 4944984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 7413254 - 7413204
Alignment:
Q  167 ttccatgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||| |||||| |||||||||||||| || |||||||||||||| ||||||    
T  7413254 ttccgtgagcttagctcagttggtaaggacaatgcataatatatacaaggt 7413204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 9383269 - 9383223
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||| |||||||||||||  || ||||||||||||||||||||||    
T  9383269 tgagcttagctcagttggtatggacaatgcataatatatgcaaggtt 9383223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 12124553 - 12124591
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||||| || |||||||||||||||||||||    
T  12124553 agctcagttggtaaggacaatgcataatatatgcaaggt 12124591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 21482572 - 21482534
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  21482572 agctcagttggtaaggataatgtataatatatgcaaggt 21482534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 35685114 - 35685076
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||||| || |||||||||||||||||||||    
T  35685114 agctcagttggtaaggacaatgcataatatatgcaaggt 35685076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 36547295 - 36547253
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaa 214  Q
    |||||| |||||||||||||| ||||||| |||||||||||||    
T  36547295 tgagcttagctcagttggtaaggataatgtataatatatgcaa 36547253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 43117243 - 43117205
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||||| || |||||||||||||||||||||    
T  43117243 agctcagttggtaaggacaatgcataatatatgcaaggt 43117205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 833125 - 833084
Alignment:
Q  176 ctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    ||||||||||||||||  || |||||||||||||||||||||    
T  833125 ctcagctcagttggtatggacaatgcataatatatgcaaggt 833084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 3197132 - 3197087
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggttcagatt 224  Q
    |||||||||||||  || ||||||||||||||||||||||| ||||    
T  3197132 agctcagttggtagggacaatgcataatatatgcaaggttcggatt 3197087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 4056791 - 4056836
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| ||||| |||||||| || |||||||||||||||||||||    
T  4056791 tgagcttagctcggttggtaaggacaatgcataatatatgcaaggt 4056836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 5168641 - 5168592
Alignment:
Q  170 catgagctcagctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||||| | |||||||| ||  ||||||||||||||||||||||||||    
T  5168641 catgagcttaactcagttgatagggataatgcataatatatgcaaggttc 5168592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 7206126 - 7206171
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  7206126 tgagcttagctcagttggtagagacaatgcataatatatgcaaggt 7206171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 12619347 - 12619388
Alignment:
Q  174 agctcagctcagttggtaacgataatgcataatatatgcaag 215  Q
    |||| |||||||||| ||| ||||||||||||||||||||||    
T  12619347 agcttagctcagttgataatgataatgcataatatatgcaag 12619388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 20565135 - 20565090
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  20565135 tgagcttagctcagttggtagggacaatgcataatatatgcaaggt 20565090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 22608528 - 22608573
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  22608528 tgagcttagctcagttggtagagacaatgcataatatatgcaaggt 22608573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 24393246 - 24393291
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||| ||| || |||||||||||||||||||||    
T  24393246 tgagcttagctcagttgttaaggacaatgcataatatatgcaaggt 24393291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 26400761 - 26400798
Alignment:
Q  181 ctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||||||||| || ||||||||||||||||||||||    
T  26400761 ctcagttggtaaggacaatgcataatatatgcaaggtt 26400798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 27152354 - 27152399
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| | |||||||||||  ||||||||||||||||||||||||    
T  27152354 tgagcttaactcagttggtagggataatgcataatatatgcaaggt 27152399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 31543013 - 31543058
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| ||||||| |||||  ||||||||||||||||||||||||    
T  31543013 tgagcttagctcagatggtatggataatgcataatatatgcaaggt 31543058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 5676740 - 5676784
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaagg 216  Q
    |||||| | |||||||||||| || ||||||||||||||||||||    
T  5676740 tgagcttaactcagttggtaatgacaatgcataatatatgcaagg 5676784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 6141230 - 6141266
Alignment:
Q  181 ctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||| || |||||||||||||||||||||    
T  6141230 ctcagttggtaaggacaatgcataatatatgcaaggt 6141266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 7772511 - 7772475
Alignment:
Q  181 ctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  7772511 ctcaattggtaaggataatgcataatatatgcaaggt 7772475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 15617660 - 15617700
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    ||||||||| |||  ||||||||||||||||||||||||||    
T  15617660 agctcagttagtatggataatgcataatatatgcaaggttc 15617700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 28771590 - 28771626
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaag 215  Q
    |||||||||||||| || |||||||||||||||||||    
T  28771590 agctcagttggtaaggacaatgcataatatatgcaag 28771626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 29350106 - 29350066
Alignment:
Q  171 atgagctcagctcagttggtaacgataatgcataatatatg 211  Q
    ||||||| |||||||||| ||| ||||||||||||||||||    
T  29350106 atgagcttagctcagttgttaaggataatgcataatatatg 29350066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 34745295 - 34745251
Alignment:
Q  174 agctcagctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||| ||||||||||||   |||||||||||||||||||||||||    
T  34745295 agcttagctcagttggtttggataatgcataatatatgcaaggtt 34745251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 34903515 - 34903563
Alignment:
Q  169 ccatgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    ||||||||| || ||||||||||| || | |||||||||||||||||||    
T  34903515 ccatgagcttagttcagttggtaaggacagtgcataatatatgcaaggt 34903563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 23816791 - 23816834
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaag 215  Q
    |||||| |||||||||||||| ||||||||||||||||||||||    
T  23816791 tgagcttagctcagttggtaaggataatgcataatatatgcaag 23816834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 1200392 - 1200346
Alignment:
Q  185 gttggtaacgataatgcataatatatgcaaggttca-gatttgaacc 230  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  1200392 gttggtaaagataatgcataatatatgcaaggttcaggatttgaacc 1200346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 17704014 - 17704059
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||||||||||||||||||||    
T  17704014 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 17704059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 19778066 - 19778111
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||||||||||||||||||||    
T  19778066 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 19778111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 30623294 - 30623339
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||||||||||||||||||||    
T  30623294 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 30623339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 33451409 - 33451364
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||    
T  33451409 tgagcttagctcagttggtatggataatgcataatatatgcaaggt 33451364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 9656059 - 9656012
Alignment:
Q  170 catgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||| |||||||||||||| || ||||||||| |||||||||||    
T  9656059 catgagcttagctcagttggtaaggacaatgcataaaatatgcaaggt 9656012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 37938792 - 37938745
Alignment:
Q  170 catgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||| ||||||| |||||  ||||||||||||||||||||||||    
T  37938792 catgagcttagctcagctggtatggataatgcataatatatgcaaggt 37938745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 5179799 - 5179841
Alignment:
Q  177 tcagctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||||||||||||| || |||||||||||||| ||||||||    
T  5179799 tcagctcagttggtaaggacaatgcataatatatacaaggttc 5179841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 22847517 - 22847471
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||| |||||||||||||| || ||||| ||||||||||||||||    
T  22847517 tgagcttagctcagttggtaaggaaaatgcgtaatatatgcaaggtt 22847471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 42208522 - 42208484
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||||| || |||||||||||||||||||||    
T  42208522 agctcagttggtaaggacaatgcataatatatgcaaggt 42208484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 8984557 - 8984508
Alignment:
Q  169 ccatgagctcagctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    ||||||||| | |||||||||||  ||||||| |||||||||||||||||    
T  8984557 ccatgagcttaactcagttggtatggataatgtataatatatgcaaggtt 8984508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 9635111 - 9635066
Alignment:
Q  174 agctcagctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||| ||||||||| |||| |||||||||||||| |||||||||||    
T  9635111 agcttagctcagtttgtaaggataatgcataatacatgcaaggttc 9635066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 11708987 - 11709032
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  11708987 tgagcttagctcagttggtagggacaatgcataatatatgcaaggt 11709032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 15079217 - 15079160
Alignment:
Q  167 ttccatgagctcagctcagttggtaacgataatgcataatatatgcaaggttcagatt 224  Q
    |||| |||||| | |||||||||||  || |||||||||||||||||||||| |||||    
T  15079217 ttccgtgagcttaactcagttggtagggacaatgcataatatatgcaaggtttagatt 15079160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 15438454 - 15438499
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||| ||||||| || |||||||||||||||||||||    
T  15438454 tgagcttagctcacttggtaaggacaatgcataatatatgcaaggt 15438499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 15529758 - 15529803
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||| ||||||| || |||||||||||||||||||||    
T  15529758 tgagcttagctcacttggtaaggacaatgcataatatatgcaaggt 15529803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 18942919 - 18942960
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgca 213  Q
    |||||| |||||||||||||  ||||||||||||||||||||    
T  18942919 tgagcttagctcagttggtagggataatgcataatatatgca 18942960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 27587222 - 27587267
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || ||||||| |||||||||||||    
T  27587222 tgagcttagctcagttggtaaggacaatgcatgatatatgcaaggt 27587267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 27750964 - 27750919
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || | |||||||||||||||||||    
T  27750964 tgagcttagctcagttggtaaggacagtgcataatatatgcaaggt 27750919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 28219864 - 28219909
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||| ||| ||||||||||||||| ||||||||    
T  28219864 tgagcttagctcagttgttaaggataatgcataatatttgcaaggt 28219909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 29186503 - 29186548
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||| |||||||||||| || ||||| |||||||||||||||    
T  29186503 tgagctcaactcagttggtaaggacaatgcgtaatatatgcaaggt 29186548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 30427732 - 30427777
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  30427732 tgagcttagctcagttggtatggacaatgcataatatatgcaaggt 30427777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 37015896 - 37015851
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  37015896 tgagcttagctcagttggtagagacaatgcataatatatgcaaggt 37015851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 37999480 - 37999435
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| | |||||||||||  ||||||||||||||||||||||||    
T  37999480 tgagcttaactcagttggtatggataatgcataatatatgcaaggt 37999435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 39821885 - 39821930
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  39821885 tgagcttagctcagttggtagggacaatgcataatatatgcaaggt 39821930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 8442538 - 8442502
Alignment:
Q  181 ctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||| || |||||||||||||||||||||    
T  8442538 ctcagttggtaaggacaatgcataatatatgcaaggt 8442502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 8717528 - 8717488
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||||||||||  || |||||||||||||||||||||||    
T  8717528 agctcagttggtatggacaatgcataatatatgcaaggttc 8717488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 75326 - 75371
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||||||||||||||||||||    
T  75326 tgagctaagctcagttggtaaggacaatgcataatatatgcaaggt 75371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 1572 - 1617
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| | ||||||||||||||||| |||||||||||||||||||    
T  1572 tgagcttaactcagttggtaacgatagtgcataatatatgcaaggt 1617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 8615024 - 8615069
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||||||||||||||||||||    
T  8615024 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 8615069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 21050282 - 21050237
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||||||||||||||||||||    
T  21050282 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 21050237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 46987087 - 46987132
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||||||||||||||||||||    
T  46987087 tgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 46987132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 18714451 - 18714494
Alignment:
Q  174 agctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||| |||||||||||||| || |||||||||||||||||||||    
T  18714451 agcttagctcagttggtaaggacaatgcataatatatgcaaggt 18714494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 21105604 - 21105651
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||| |||||||||||||  || |||||||||||||||||||||||    
T  21105604 tgagcttagctcagttggtatggaaaatgcataatatatgcaaggttc 21105651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 24991782 - 24991825
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaag 215  Q
    |||||| |||||||||||||| || |||||||||||||||||||    
T  24991782 tgagcttagctcagttggtaaggacaatgcataatatatgcaag 24991825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 34568386 - 34568347
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  34568386 agctcagttgataaggataatgcataatatatgcaaggtt 34568347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 5833043 - 5833085
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaa 214  Q
    |||||| |||||||||||||  |||||||||||||||||||||    
T  5833043 tgagcttagctcagttggtagggataatgcataatatatgcaa 5833085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 7872801 - 7872763
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||||| || |||||||||||||||||||||    
T  7872801 agctcagttggtaaggacaatgcataatatatgcaaggt 7872763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 13044202 - 13044156
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||| |||||||||||||| || ||||||||| ||||||||||||    
T  13044202 tgagcttagctcagttggtaaggacaatgcataaaatatgcaaggtt 13044156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 22690096 - 22690050
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||| |||||||||| |||  ||||||||||||||||||||||||    
T  22690096 tgagcttagctcagttgctaagaataatgcataatatatgcaaggtt 22690050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 26816724 - 26816682
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaa 214  Q
    |||||| |||||||||||||  |||||||||||||||||||||    
T  26816724 tgagcttagctcagttggtagggataatgcataatatatgcaa 26816682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 2618688 - 2618725
Alignment:
Q  180 gctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    ||||||||||||| || |||||||||||||||||||||    
T  2618688 gctcagttggtaaggacaatgcataatatatgcaaggt 2618725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 219
Target Start/End: Complemental strand, 2962772 - 2962739
Alignment:
Q  186 ttggtaacgataatgcataatatatgcaaggttc 219  Q
    ||||||| ||||||||||||||||||||||||||    
T  2962772 ttggtaaagataatgcataatatatgcaaggttc 2962739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 4047787 - 4047835
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttcag 221  Q
    |||||| |||||||||| ||  ||||||||||||||||||||||||||||    
T  4047787 tgagcttagctcagttgatag-gataatgcataatatatgcaaggttcag 4047835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 10244728 - 10244773
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  10244728 tgagcttagctcagttggtatggacaatgcataatatatgcaaggt 10244773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 21322176 - 21322221
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| | |||||||||||| ||||||||||||| ||||||||||    
T  21322176 tgagcttaactcagttggtaaggataatgcataatgtatgcaaggt 21322221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 25888901 - 25888946
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| ||  ||||||||||||||||||||    
T  25888901 tgagcttagctcagttggtaaggacgatgcataatatatgcaaggt 25888946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 30296334 - 30296379
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||| ||||||||||||||||    
T  30296334 tgagcttagctcagttggtaaggacaatgtataatatatgcaaggt 30296379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 37230088 - 37230043
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| | |||||||||||| || |||||||||||||||||||||    
T  37230088 tgagcttaactcagttggtaaggaaaatgcataatatatgcaaggt 37230043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 37864426 - 37864471
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| ||||||||||||||  | |||||||||||||||||||||    
T  37864426 tgagcttagctcagttggtaagtacaatgcataatatatgcaaggt 37864471  T

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Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 40762267 - 40762222
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| ||||||| |||||| || |||||||||||||||||||||    
T  40762267 tgagcttagctcagatggtaaggacaatgcataatatatgcaaggt 40762222  T

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Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 41029273 - 41029318
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || |||| ||||||||||||||||    
T  41029273 tgagcttagctcagttggtaaggacaatgtataatatatgcaaggt 41029318  T

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Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 44941464 - 44941427
Alignment:
Q  181 ctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||||||||  |||||||||||||||||||||||||    
T  44941464 ctcagttggtagggataatgcataatatatgcaaggtt 44941427  T

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Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 48007607 - 48007562
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| | |||||||||||| || |||||||||||||||||||||    
T  48007607 tgagcttaactcagttggtaatgacaatgcataatatatgcaaggt 48007562  T

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Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 4340135 - 4340171
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaag 215  Q
    |||||||||||||| || |||||||||||||||||||    
T  4340135 agctcagttggtaaggacaatgcataatatatgcaag 4340171  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 655809 - 655764
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| ||||||||||||| ||| |||||||||||||||||||||    
T  655809 tgagcttagctcagttggtatcgacaatgcataatatatgcaaggt 655764  T

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Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 788867 - 788914
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||| | |||||||||||| || |||||||||||||||||||||||    
T  788867 tgagcttatctcagttggtaaggacaatgcataatatatgcaaggttc 788914  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 32053789 - 32053836
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||| |||||||||||||  || |||||||||||||||||||||||    
T  32053789 tgagcttagctcagttggtatggacaatgcataatatatgcaaggttc 32053836  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 4450258 - 4450308
Alignment:
Q  167 ttccatgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||| |||||| |||||||||| ||| || |||||||||||||||||||||    
T  4450258 ttccgtgagcttagctcagttgataaagacaatgcataatatatgcaaggt 4450308  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 8810641 - 8810686
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || ||| |||||||||||||||||    
T  8810641 tgagcttagctcagttggtaaagacaatacataatatatgcaaggt 8810686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 18254161 - 18254116
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || ||||||||||| |||||||||    
T  18254161 tgagcttagctcagttggtaaggacaatgcataatacatgcaaggt 18254116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 18256884 - 18256929
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||| ||| || |||||||||||||||||||||    
T  18256884 tgagcttagctcagttgataaggacaatgcataatatatgcaaggt 18256929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 20744139 - 20744184
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||  || |||||||||||||||||||||    
T  20744139 tgagcttagctcagttggtatggacaatgcataatatatgcaaggt 20744184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 30370210 - 30370165
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| || ||||||||||| |||||||||||||||||| |||||    
T  30370210 tgagcttagttcagttggtaaagataatgcataatatatgtaaggt 30370165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 30960113 - 30960068
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || ||||| |||||||||||||||    
T  30960113 tgagcttagctcagttggtaaggacaatgcttaatatatgcaaggt 30960068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 334142 - 334186
Alignment:
Q  173 gagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    ||||| |||||||||| ||| || |||||||||||||||||||||    
T  334142 gagcttagctcagttgataaagacaatgcataatatatgcaaggt 334186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 10780167 - 10780123
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaagg 216  Q
    |||||| |||||||||||||  || ||||||||||||||||||||    
T  10780167 tgagcttagctcagttggtagggacaatgcataatatatgcaagg 10780123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 14441508 - 14441468
Alignment:
Q  179 agctcagttggtaacgataatgcataatatatgcaaggttc 219  Q
    |||||||||||||| || |||||||||| ||||||||||||    
T  14441508 agctcagttggtaaggacaatgcataatgtatgcaaggttc 14441468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 31971539 - 31971575
Alignment:
Q  181 ctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||||||||| || |||||||||||||||||||||    
T  31971539 ctcagttggtaaggacaatgcataatatatgcaaggt 31971575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 91622 - 91579
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaag 215  Q
    |||||| |||||||||| ||| ||||||||||||||||||||||    
T  91622 tgagcttagctcagttgttaaggataatgcataatatatgcaag 91579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 39999 - 40045
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggtt 218  Q
    |||||| |||||||||||||  || ||||||||||||||||||||||    
T  39999 tgagcttagctcagttggtatggacaatgcataatatatgcaaggtt 40045  T

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Target: scaffold0896 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 3142 - 3187
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| |||||||||||||| || ||| |||||||||||||||||    
T  3142 tgagcttagctcagttggtaaagacaatacataatatatgcaaggt 3187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 25390 - 25435
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| | |||||||||||| || |||||||||||||||||||||    
T  25390 tgagcttaactcagttggtaaggacaatgcataatatatgcaaggt 25435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 34948 - 34903
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| | |||||||||||| || |||||||||||||||||||||    
T  34948 tgagcttaactcagttggtaaggacaatgcataatatatgcaaggt 34903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 42394 - 42349
Alignment:
Q  172 tgagctcagctcagttggtaacgataatgcataatatatgcaaggt 217  Q
    |||||| ||||||||||| || || |||||||||||||||||||||    
T  42394 tgagcttagctcagttgggaaggacaatgcataatatatgcaaggt 42349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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