View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0908_low_8 (Length: 623)

Name: NF0908_low_8
Description: NF0908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0908_low_8
NF0908_low_8
[»] scaffold0154 (1 HSPs)
scaffold0154 (278-609)||(11729-12061)
[»] chr3 (92 HSPs)
chr3 (278-609)||(53915750-53916082)
chr3 (278-609)||(1313082-1313412)
chr3 (278-603)||(27635887-27636212)
chr3 (277-609)||(51943041-51943374)
chr3 (278-609)||(53917918-53918250)
chr3 (278-609)||(457950-458287)
chr3 (278-601)||(746422-746752)
chr3 (278-609)||(455573-455910)
chr3 (278-578)||(10621827-10622127)
chr3 (276-609)||(25533105-25533445)
chr3 (280-552)||(42989954-42990228)
chr3 (278-609)||(42991953-42992289)
chr3 (278-609)||(4104149-4104483)
chr3 (277-578)||(41848803-41849114)
chr3 (489-609)||(6561694-6561813)
chr3 (527-609)||(15780781-15780863)
chr3 (509-601)||(23633363-23633455)
chr3 (515-601)||(28761690-28761776)
chr3 (529-609)||(11170327-11170407)
chr3 (530-609)||(1626937-1627016)
chr3 (515-609)||(880706-880800)
chr3 (531-609)||(10956281-10956359)
chr3 (531-609)||(10958577-10958655)
chr3 (527-609)||(45882860-45882942)
chr3 (528-609)||(4308535-4308616)
chr3 (509-598)||(53597144-53597232)
chr3 (529-609)||(3859451-3859531)
chr3 (529-609)||(5522869-5522949)
chr3 (529-609)||(11163073-11163153)
chr3 (509-601)||(24979611-24979702)
chr3 (527-606)||(1321362-1321441)
chr3 (278-337)||(6561613-6561672)
chr3 (361-444)||(11066346-11066429)
chr3 (530-609)||(28137549-28137628)
chr3 (530-609)||(47701849-47701928)
chr3 (530-609)||(53468709-53468788)
chr3 (515-609)||(890025-890119)
chr3 (531-609)||(6231374-6231452)
chr3 (527-609)||(26720469-26720551)
chr3 (527-609)||(48361925-48362006)
chr3 (528-609)||(51727260-51727341)
chr3 (361-433)||(54287487-54287559)
chr3 (530-601)||(36011751-36011822)
chr3 (530-609)||(43423717-43423796)
chr3 (515-601)||(3314593-3314679)
chr3 (527-601)||(12268228-12268302)
chr3 (529-607)||(22114561-22114639)
chr3 (531-609)||(43421669-43421747)
chr3 (363-428)||(53974011-53974077)
chr3 (529-609)||(6066050-6066131)
chr3 (529-609)||(18097154-18097235)
chr3 (529-609)||(18099424-18099504)
chr3 (527-609)||(32264293-32264379)
chr3 (528-609)||(35918203-35918284)
chr3 (528-609)||(43226008-43226089)
chr3 (529-609)||(5191576-5191656)
chr3 (509-609)||(32218999-32219098)
chr3 (529-601)||(35777344-35777416)
chr3 (530-601)||(5927026-5927097)
chr3 (529-609)||(6063700-6063782)
chr3 (530-601)||(28100303-28100374)
chr3 (530-609)||(28102256-28102335)
chr3 (531-601)||(3306724-3306794)
chr3 (358-428)||(11072731-11072801)
chr3 (530-588)||(28180948-28181006)
chr3 (531-601)||(51675017-51675087)
chr3 (528-593)||(6484307-6484372)
chr3 (528-609)||(43228213-43228294)
chr3 (516-601)||(53591105-53591190)
chr3 (517-601)||(23636938-23637022)
chr3 (515-601)||(31151256-31151344)
chr3 (527-588)||(24177200-24177261)
chr3 (528-609)||(39715392-39715472)
chr3 (288-337)||(53974148-53974197)
chr3 (509-601)||(1618917-1619012)
chr3 (527-609)||(18162585-18162666)
chr3 (278-318)||(27000083-27000123)
chr3 (529-601)||(50493922-50493994)
chr3 (530-609)||(47149149-47149233)
chr3 (530-601)||(54691836-54691906)
chr3 (288-334)||(11072644-11072690)
chr3 (510-591)||(4560537-4560618)
chr3 (517-573)||(13419787-13419844)
chr3 (530-607)||(10084645-10084726)
chr3 (527-607)||(10191565-10191649)
chr3 (527-598)||(13420437-13420508)
chr3 (570-609)||(30005805-30005844)
chr3 (570-609)||(38890004-38890043)
chr3 (570-609)||(42990268-42990307)
chr3 (529-584)||(53896475-53896530)
chr3 (530-609)||(54884081-54884160)
chr3 (529-578)||(6719396-6719445)
[»] chr4 (92 HSPs)
chr4 (278-609)||(5100743-5101074)
chr4 (278-609)||(56030189-56030521)
chr4 (278-609)||(14787687-14788021)
chr4 (278-609)||(17662490-17662826)
chr4 (278-578)||(22132686-22132987)
chr4 (278-601)||(44600102-44600428)
chr4 (277-552)||(22134943-22135220)
chr4 (278-609)||(24347959-24348295)
chr4 (294-551)||(30136331-30136589)
chr4 (278-428)||(47211158-47211308)
chr4 (385-601)||(19322547-19322766)
chr4 (278-479)||(38890517-38890701)
chr4 (406-609)||(53404998-53405207)
chr4 (277-601)||(10112625-10112942)
chr4 (278-444)||(9022060-9022225)
chr4 (489-609)||(47210996-47211122)
chr4 (277-432)||(9863498-9863650)
chr4 (527-609)||(22802990-22803072)
chr4 (527-609)||(48486314-48486396)
chr4 (489-609)||(18709419-18709547)
chr4 (527-609)||(22801118-22801200)
chr4 (358-444)||(54929094-54929180)
chr4 (515-616)||(24446828-24446929)
chr4 (527-609)||(5198415-5198497)
chr4 (515-609)||(19095865-19095959)
chr4 (527-609)||(47274722-47274804)
chr4 (527-598)||(619714-619785)
chr4 (358-437)||(10979676-10979755)
chr4 (527-609)||(24888791-24888873)
chr4 (527-601)||(40091679-40091753)
chr4 (528-609)||(36378288-36378369)
chr4 (529-609)||(11434952-11435032)
chr4 (509-601)||(15032800-15032892)
chr4 (530-609)||(3937465-3937543)
chr4 (527-601)||(8756513-8756588)
chr4 (278-337)||(14789512-14789571)
chr4 (515-601)||(18537734-18537821)
chr4 (280-379)||(19322410-19322510)
chr4 (527-609)||(22044646-22044728)
chr4 (515-609)||(38928434-38928528)
chr4 (527-609)||(51015241-51015323)
chr4 (528-609)||(6764835-6764916)
chr4 (527-609)||(36919841-36919925)
chr4 (528-609)||(40637070-40637151)
chr4 (530-609)||(2891314-2891394)
chr4 (517-609)||(12396101-12396193)
chr4 (517-609)||(12401063-12401155)
chr4 (530-609)||(38270242-38270321)
chr4 (527-609)||(22046941-22047023)
chr4 (527-601)||(24878984-24879058)
chr4 (531-601)||(33415751-33415821)
chr4 (531-609)||(37313322-37313400)
chr4 (509-601)||(16186100-16186193)
chr4 (515-588)||(18535106-18535179)
chr4 (529-601)||(9174410-9174482)
chr4 (529-601)||(16934407-16934479)
chr4 (529-609)||(18847150-18847230)
chr4 (509-609)||(52942702-52942802)
chr4 (527-609)||(24880446-24880528)
chr4 (288-444)||(38209098-38209259)
chr4 (534-592)||(41997494-41997552)
chr4 (527-609)||(9148246-9148330)
chr4 (532-601)||(9176738-9176807)
chr4 (528-609)||(14633316-14633396)
chr4 (529-609)||(37089627-37089710)
chr4 (528-609)||(47868397-47868478)
chr4 (529-601)||(16932053-16932125)
chr4 (529-609)||(7941316-7941398)
chr4 (361-420)||(29609838-29609897)
chr4 (528-609)||(2485128-2485210)
chr4 (527-609)||(31849855-31849937)
chr4 (527-609)||(5637721-5637807)
chr4 (528-609)||(16453305-16453386)
chr4 (509-578)||(25357614-25357683)
chr4 (527-609)||(36921750-36921833)
chr4 (294-334)||(5516793-5516833)
chr4 (531-578)||(40999234-40999281)
chr4 (531-609)||(13543953-13544036)
chr4 (358-400)||(14647172-14647214)
chr4 (530-601)||(12102088-12102161)
chr4 (527-609)||(38409194-38409282)
chr4 (528-609)||(8631675-8631760)
chr4 (530-609)||(6132871-6132949)
chr4 (570-609)||(11006493-11006532)
chr4 (570-609)||(11008822-11008861)
chr4 (530-609)||(18409603-18409681)
chr4 (292-327)||(29609948-29609983)
chr4 (528-575)||(36380370-36380417)
chr4 (358-407)||(5516703-5516752)
chr4 (528-601)||(16455283-16455356)
chr4 (530-578)||(52043716-52043765)
chr4 (527-563)||(3824875-3824911)
[»] chr7 (74 HSPs)
chr7 (278-609)||(37412384-37412716)
chr7 (278-609)||(21989853-21990183)
chr7 (278-609)||(7092431-7092768)
chr7 (278-609)||(7094678-7095015)
chr7 (278-609)||(11756925-11757262)
chr7 (278-609)||(20299155-20299492)
chr7 (276-609)||(3035413-3035754)
chr7 (278-609)||(31156167-31156500)
chr7 (275-609)||(18345234-18345574)
chr7 (278-609)||(20625734-20626071)
chr7 (278-609)||(20629625-20629962)
chr7 (278-609)||(20642044-20642381)
chr7 (278-609)||(42331255-42331593)
chr7 (277-609)||(38393682-38394019)
chr7 (278-601)||(7472244-7472574)
chr7 (350-609)||(13099732-13099993)
chr7 (277-578)||(1606170-1606472)
chr7 (278-609)||(7470278-7470621)
chr7 (278-601)||(28487249-28487578)
chr7 (278-609)||(28485261-28485599)
chr7 (278-552)||(38395986-38396262)
chr7 (278-609)||(7351908-7352246)
chr7 (278-609)||(7349529-7349867)
chr7 (278-552)||(1849665-1849941)
chr7 (278-546)||(21470614-21470883)
chr7 (278-478)||(47865328-47865528)
chr7 (286-609)||(24258166-24258496)
chr7 (278-598)||(3676997-3677301)
chr7 (358-578)||(43253811-43254035)
chr7 (382-609)||(20297163-20297395)
chr7 (278-426)||(443326-443474)
chr7 (489-609)||(443508-443628)
chr7 (281-444)||(40281824-40281989)
chr7 (509-601)||(7188476-7188568)
chr7 (527-609)||(27306485-27306567)
chr7 (527-609)||(44515-44597)
chr7 (509-588)||(20091818-20091897)
chr7 (527-598)||(22392424-22392495)
chr7 (515-609)||(11355197-11355291)
chr7 (527-609)||(18567564-18567646)
chr7 (515-609)||(20137365-20137459)
chr7 (527-609)||(31435303-31435385)
chr7 (529-609)||(1049551-1049631)
chr7 (529-609)||(22251798-22251878)
chr7 (517-609)||(22828889-22828981)
chr7 (515-609)||(4296191-4296286)
chr7 (530-609)||(21679981-21680060)
chr7 (527-593)||(35580-35646)
chr7 (288-337)||(20297108-20297157)
chr7 (530-609)||(21678020-21678099)
chr7 (530-609)||(44724533-44724612)
chr7 (358-444)||(12310442-12310528)
chr7 (527-609)||(26804524-26804602)
chr7 (510-601)||(30906313-30906405)
chr7 (530-609)||(42223110-42223190)
chr7 (531-601)||(24465503-24465574)
chr7 (515-609)||(9680753-9680852)
chr7 (530-600)||(39146252-39146322)
chr7 (286-332)||(43254023-43254069)
chr7 (288-336)||(10690684-10690732)
chr7 (529-601)||(25542484-25542555)
chr7 (529-609)||(40836998-40837078)
chr7 (532-601)||(24817613-24817682)
chr7 (528-609)||(48457601-48457686)
chr7 (530-601)||(24748548-24748619)
chr7 (530-609)||(25276095-25276174)
chr7 (531-609)||(9679009-9679092)
chr7 (372-444)||(10690773-10690845)
chr7 (527-601)||(3878522-3878602)
chr7 (527-598)||(6332177-6332248)
chr7 (570-609)||(1849975-1850014)
chr7 (358-405)||(12484976-12485023)
chr7 (358-405)||(12506407-12506454)
chr7 (555-601)||(21592407-21592453)
[»] chr5 (66 HSPs)
chr5 (275-609)||(26097418-26097756)
chr5 (278-609)||(26098507-26098841)
chr5 (278-609)||(18468698-18469034)
chr5 (280-609)||(18511468-18511800)
chr5 (281-609)||(18509574-18509904)
chr5 (278-609)||(27912219-27912559)
chr5 (278-552)||(25803707-25803982)
chr5 (278-578)||(27910135-27910437)
chr5 (278-574)||(3373332-3373630)
chr5 (298-609)||(10586549-10586865)
chr5 (278-593)||(18596326-18596654)
chr5 (277-578)||(15551924-15552227)
chr5 (358-609)||(18466453-18466707)
chr5 (278-461)||(21288529-21288713)
chr5 (285-430)||(17415748-17415893)
chr5 (411-609)||(40221340-40221545)
chr5 (489-602)||(41585969-41586082)
chr5 (358-573)||(15143262-15143475)
chr5 (527-603)||(36402590-36402666)
chr5 (491-601)||(6661446-6661555)
chr5 (278-382)||(6661929-6662033)
chr5 (527-601)||(2818600-2818674)
chr5 (527-609)||(12556179-12556261)
chr5 (527-609)||(20507718-20507800)
chr5 (278-332)||(18466411-18466465)
chr5 (527-601)||(25921737-25921811)
chr5 (533-609)||(10474579-10474655)
chr5 (529-609)||(31542678-31542758)
chr5 (530-601)||(36208524-36208596)
chr5 (530-601)||(17072827-17072898)
chr5 (530-601)||(25904047-25904118)
chr5 (530-601)||(34530930-34531001)
chr5 (278-332)||(15143220-15143274)
chr5 (537-609)||(21288715-21288787)
chr5 (529-609)||(31545023-31545103)
chr5 (530-601)||(24126800-24126871)
chr5 (278-337)||(40221282-40221341)
chr5 (527-609)||(4236570-4236652)
chr5 (527-601)||(21947968-21948041)
chr5 (515-609)||(31472869-31472963)
chr5 (528-609)||(10529355-10529436)
chr5 (529-609)||(38882048-38882129)
chr5 (528-609)||(39854426-39854506)
chr5 (529-609)||(31179627-31179707)
chr5 (528-608)||(37706037-37706117)
chr5 (530-609)||(2174863-2174942)
chr5 (510-609)||(6756419-6756517)
chr5 (527-609)||(16776098-16776181)
chr5 (530-609)||(20042994-20043073)
chr5 (530-599)||(20044954-20045023)
chr5 (528-609)||(4409999-4410084)
chr5 (530-609)||(695833-695912)
chr5 (530-609)||(1189865-1189949)
chr5 (509-588)||(42770697-42770775)
chr5 (529-591)||(31466252-31466314)
chr5 (358-431)||(32520241-32520316)
chr5 (530-609)||(39398249-39398327)
chr5 (530-580)||(2723911-2723961)
chr5 (528-609)||(17818746-17818826)
chr5 (527-578)||(2144878-2144930)
chr5 (570-609)||(25804009-25804048)
chr5 (570-609)||(34477310-34477349)
chr5 (570-609)||(34479675-34479714)
chr5 (390-444)||(6661594-6661648)
chr5 (288-337)||(5779168-5779217)
chr5 (511-578)||(4897638-4897710)
[»] scaffold0005 (4 HSPs)
scaffold0005 (278-609)||(51709-52043)
scaffold0005 (278-337)||(50159-50218)
scaffold0005 (528-609)||(183896-183976)
scaffold0005 (358-400)||(170076-170118)
[»] chr2 (59 HSPs)
chr2 (277-609)||(42923765-42924095)
chr2 (278-609)||(42452449-42452782)
chr2 (278-609)||(23452493-23452829)
chr2 (278-578)||(35215883-35216184)
chr2 (278-552)||(35218290-35218565)
chr2 (278-548)||(27583643-27583907)
chr2 (288-444)||(28568584-28568740)
chr2 (278-407)||(27136368-27136505)
chr2 (358-444)||(15693669-15693755)
chr2 (527-609)||(40032314-40032396)
chr2 (529-609)||(24162468-24162548)
chr2 (509-601)||(37963191-37963283)
chr2 (530-609)||(22163203-22163282)
chr2 (285-373)||(34575608-34575696)
chr2 (515-609)||(31733021-31733115)
chr2 (529-609)||(13910300-13910380)
chr2 (529-609)||(19504601-19504681)
chr2 (529-609)||(27104718-27104798)
chr2 (530-601)||(11578368-11578439)
chr2 (530-609)||(19007560-19007639)
chr2 (358-429)||(39286971-39287042)
chr2 (531-609)||(6264401-6264479)
chr2 (515-601)||(17849022-17849108)
chr2 (527-609)||(22287592-22287674)
chr2 (527-609)||(22407665-22407747)
chr2 (527-609)||(42064432-42064514)
chr2 (527-591)||(12342684-12342748)
chr2 (359-444)||(7502638-7502723)
chr2 (531-609)||(15539731-15539809)
chr2 (527-601)||(18800566-18800640)
chr2 (515-609)||(28196542-28196636)
chr2 (383-479)||(34575528-34575617)
chr2 (358-436)||(41303457-41303535)
chr2 (528-601)||(45280249-45280322)
chr2 (533-609)||(3022086-3022162)
chr2 (530-601)||(11739824-11739895)
chr2 (358-437)||(41304806-41304884)
chr2 (527-609)||(6259071-6259153)
chr2 (531-609)||(19502267-19502345)
chr2 (527-609)||(43623824-43623906)
chr2 (527-609)||(21520949-21521033)
chr2 (288-337)||(28568346-28568395)
chr2 (509-578)||(40699209-40699278)
chr2 (530-593)||(14837193-14837256)
chr2 (531-609)||(38020064-38020142)
chr2 (515-601)||(45239240-45239331)
chr2 (528-601)||(22874060-22874133)
chr2 (509-573)||(20147040-20147104)
chr2 (538-601)||(34979843-34979906)
chr2 (288-334)||(15693583-15693629)
chr2 (528-609)||(5377685-5377770)
chr2 (515-601)||(17848350-17848434)
chr2 (527-578)||(35107217-35107268)
chr2 (570-609)||(38020162-38020201)
chr2 (288-337)||(41303573-41303623)
chr2 (560-589)||(38414311-38414340)
chr2 (527-578)||(17897528-17897580)
chr2 (517-569)||(20146903-20146955)
chr2 (530-578)||(20589581-20589629)
[»] chr1 (98 HSPs)
chr1 (278-609)||(47905956-47906293)
chr1 (278-609)||(31735779-31736115)
chr1 (278-609)||(17324894-17325227)
chr1 (278-609)||(28998511-28998844)
chr1 (278-609)||(29004227-29004560)
chr1 (278-609)||(39931762-39932096)
chr1 (278-578)||(24325347-24325648)
chr1 (278-601)||(9459683-9460013)
chr1 (278-609)||(9463502-9463840)
chr1 (278-582)||(48664852-48665167)
chr1 (278-578)||(15295137-15295439)
chr1 (278-609)||(27337196-27337532)
chr1 (278-609)||(27339388-27339730)
chr1 (278-609)||(2949489-2949815)
chr1 (305-609)||(21948445-21948756)
chr1 (277-467)||(4131693-4131883)
chr1 (277-467)||(45693835-45694025)
chr1 (278-463)||(6115532-6115718)
chr1 (278-466)||(6997214-6997395)
chr1 (390-578)||(46432017-46432207)
chr1 (400-608)||(2510583-2510801)
chr1 (316-476)||(6996067-6996221)
chr1 (276-393)||(46432521-46432638)
chr1 (278-431)||(16561131-16561284)
chr1 (502-609)||(6995958-6996065)
chr1 (358-444)||(11693580-11693666)
chr1 (412-582)||(26520403-26520580)
chr1 (361-444)||(14352759-14352842)
chr1 (527-609)||(13215022-13215104)
chr1 (527-609)||(41646861-41646943)
chr1 (527-609)||(47451589-47451671)
chr1 (517-598)||(49495468-49495549)
chr1 (358-444)||(13785662-13785748)
chr1 (527-601)||(28207332-28207406)
chr1 (527-609)||(38925736-38925818)
chr1 (530-603)||(14183850-14183923)
chr1 (504-609)||(20302378-20302482)
chr1 (509-609)||(31423132-31423232)
chr1 (509-601)||(42922157-42922249)
chr1 (513-601)||(50079087-50079175)
chr1 (529-609)||(51749982-51750062)
chr1 (510-601)||(18800835-18800925)
chr1 (417-479)||(6115479-6115541)
chr1 (515-601)||(11457741-11457827)
chr1 (527-609)||(15823487-15823569)
chr1 (531-609)||(18307054-18307132)
chr1 (531-609)||(25248772-25248850)
chr1 (531-601)||(25251541-25251611)
chr1 (515-601)||(50076938-50077024)
chr1 (529-609)||(6822958-6823038)
chr1 (529-609)||(13761780-13761860)
chr1 (527-609)||(16428594-16428676)
chr1 (531-609)||(17318838-17318916)
chr1 (509-601)||(8347535-8347627)
chr1 (527-609)||(28842434-28842518)
chr1 (527-588)||(30790673-30790734)
chr1 (358-407)||(32260833-32260882)
chr1 (556-609)||(4131637-4131692)
chr1 (361-444)||(10115572-10115653)
chr1 (529-609)||(10400086-10400166)
chr1 (529-593)||(16231544-16231608)
chr1 (509-601)||(39462443-39462534)
chr1 (529-601)||(51752308-51752380)
chr1 (530-601)||(2617460-2617531)
chr1 (530-609)||(17186386-17186465)
chr1 (530-601)||(31489859-31489930)
chr1 (528-609)||(9241344-9241425)
chr1 (529-609)||(6823827-6823908)
chr1 (528-601)||(12302771-12302849)
chr1 (288-337)||(32260746-32260795)
chr1 (530-591)||(50248848-50248909)
chr1 (529-601)||(16226110-16226182)
chr1 (529-609)||(20291400-20291480)
chr1 (351-398)||(13112046-13112093)
chr1 (509-608)||(14098229-14098327)
chr1 (530-609)||(18839531-18839610)
chr1 (528-609)||(6756469-6756550)
chr1 (276-317)||(6997388-6997429)
chr1 (509-601)||(8349314-8349407)
chr1 (288-337)||(13785786-13785835)
chr1 (490-579)||(16561373-16561461)
chr1 (527-601)||(28840619-28840695)
chr1 (509-581)||(16431024-16431096)
chr1 (561-609)||(31425277-31425325)
chr1 (562-601)||(6115345-6115384)
chr1 (530-593)||(17324009-17324072)
chr1 (527-570)||(43104100-43104143)
chr1 (529-601)||(47177301-47177377)
chr1 (529-601)||(47179652-47179728)
chr1 (527-606)||(3579877-3579958)
chr1 (530-607)||(50307807-50307884)
chr1 (288-335)||(11693706-11693753)
chr1 (278-309)||(21964366-21964397)
chr1 (530-601)||(26613503-26613577)
chr1 (527-588)||(15669669-15669731)
chr1 (515-581)||(40133864-40133930)
chr1 (536-593)||(13125730-13125787)
chr1 (288-328)||(10115466-10115506)
[»] scaffold0031 (1 HSPs)
scaffold0031 (277-609)||(78882-79217)
[»] chr6 (56 HSPs)
chr6 (276-601)||(12195779-12196106)
chr6 (278-609)||(2629141-2629479)
chr6 (286-609)||(17852275-17852600)
chr6 (278-609)||(30034859-30035196)
chr6 (278-601)||(30966923-30967251)
chr6 (278-609)||(19704825-19705165)
chr6 (278-552)||(18317751-18318027)
chr6 (278-552)||(26932883-26933158)
chr6 (276-479)||(5275727-5275930)
chr6 (280-587)||(17011781-17012080)
chr6 (277-479)||(22858343-22858537)
chr6 (280-444)||(20526548-20526708)
chr6 (358-444)||(30445318-30445404)
chr6 (509-601)||(15532945-15533036)
chr6 (509-607)||(15541398-15541495)
chr6 (515-602)||(15346355-15346442)
chr6 (530-609)||(24338704-24338783)
chr6 (530-609)||(32447572-32447651)
chr6 (515-609)||(3390343-3390437)
chr6 (530-607)||(13057173-13057250)
chr6 (528-593)||(30729100-30729165)
chr6 (530-609)||(25477253-25477332)
chr6 (527-609)||(1072133-1072215)
chr6 (527-609)||(14507431-14507513)
chr6 (527-609)||(15530378-15530460)
chr6 (528-609)||(28241577-28241658)
chr6 (530-601)||(3233995-3234065)
chr6 (527-609)||(8995455-8995537)
chr6 (527-609)||(9019902-9019984)
chr6 (532-609)||(3632194-3632271)
chr6 (529-609)||(11983285-11983365)
chr6 (537-609)||(14459021-14459093)
chr6 (529-609)||(19227664-19227744)
chr6 (530-593)||(22490618-22490681)
chr6 (358-444)||(30443111-30443195)
chr6 (528-609)||(1230505-1230586)
chr6 (530-607)||(13039733-13039810)
chr6 (530-609)||(3630120-3630199)
chr6 (527-588)||(3028127-3028188)
chr6 (528-601)||(12186331-12186406)
chr6 (515-593)||(15367000-15367085)
chr6 (562-601)||(15719665-15719704)
chr6 (570-609)||(26065005-26065044)
chr6 (570-609)||(26084974-26085013)
chr6 (527-609)||(32279973-32280054)
chr6 (530-611)||(14466312-14466393)
chr6 (537-609)||(13870678-13870749)
chr6 (529-609)||(20915612-20915694)
chr6 (570-609)||(4816487-4816526)
chr6 (292-335)||(12158532-12158575)
chr6 (530-601)||(12161819-12161889)
chr6 (527-578)||(25466457-25466508)
chr6 (530-580)||(10584105-10584155)
chr6 (504-549)||(28038021-28038066)
chr6 (515-601)||(26945112-26945200)
chr6 (288-333)||(30443022-30443069)
[»] chr8 (53 HSPs)
chr8 (279-609)||(41382420-41382752)
chr8 (278-609)||(41384493-41384823)
chr8 (278-609)||(15808962-15809298)
chr8 (277-601)||(43529870-43530199)
chr8 (278-609)||(28283475-28283813)
chr8 (278-601)||(3873750-3874081)
chr8 (278-601)||(608470-608805)
chr8 (277-436)||(32339093-32339252)
chr8 (429-609)||(181434-181616)
chr8 (278-395)||(3265635-3265752)
chr8 (489-609)||(32339264-32339388)
chr8 (489-609)||(24873437-24873563)
chr8 (515-609)||(14419447-14419541)
chr8 (515-609)||(13858740-13858834)
chr8 (515-616)||(35872627-35872728)
chr8 (527-609)||(4424015-4424097)
chr8 (527-609)||(14807748-14807830)
chr8 (527-609)||(15072707-15072789)
chr8 (529-609)||(44720842-44720922)
chr8 (527-601)||(2468362-2468436)
chr8 (527-609)||(3886174-3886256)
chr8 (515-609)||(5622994-5623088)
chr8 (527-609)||(28251823-28251905)
chr8 (528-609)||(26775199-26775280)
chr8 (530-609)||(27107153-27107232)
chr8 (530-609)||(33541644-33541723)
chr8 (527-609)||(27826983-27827065)
chr8 (527-609)||(27829294-27829376)
chr8 (528-601)||(1225164-1225237)
chr8 (509-601)||(15185974-15186066)
chr8 (529-609)||(18810707-18810787)
chr8 (358-444)||(11701364-11701447)
chr8 (530-609)||(14477276-14477355)
chr8 (530-609)||(25952521-25952600)
chr8 (509-584)||(31162192-31162267)
chr8 (531-609)||(36865538-36865617)
chr8 (515-609)||(30480759-30480853)
chr8 (529-609)||(18812892-18812972)
chr8 (509-601)||(27910994-27911086)
chr8 (509-601)||(27957413-27957505)
chr8 (527-609)||(15067978-15068060)
chr8 (527-609)||(12517280-12517364)
chr8 (561-609)||(37214466-37214514)
chr8 (530-609)||(5372434-5372512)
chr8 (361-432)||(13986214-13986285)
chr8 (530-601)||(21482322-21482393)
chr8 (510-573)||(6375969-6376032)
chr8 (558-601)||(21480542-21480585)
chr8 (288-334)||(13986328-13986374)
chr8 (528-578)||(14419784-14419834)
chr8 (561-601)||(3005890-3005931)
chr8 (288-337)||(30679208-30679256)
chr8 (288-332)||(11701435-11701479)
[»] scaffold0511 (1 HSPs)
scaffold0511 (278-609)||(1735-2074)
[»] scaffold0468 (3 HSPs)
scaffold0468 (279-393)||(2070-2184)
scaffold0468 (421-479)||(2022-2080)
scaffold0468 (490-601)||(1895-2004)
[»] scaffold0133 (2 HSPs)
scaffold0133 (278-426)||(4546-4694)
scaffold0133 (489-601)||(4727-4839)
[»] scaffold1674 (1 HSPs)
scaffold1674 (278-372)||(1-95)
[»] scaffold0339 (1 HSPs)
scaffold0339 (527-609)||(3947-4029)
[»] scaffold0131 (1 HSPs)
scaffold0131 (527-609)||(14969-15051)
[»] scaffold0250 (1 HSPs)
scaffold0250 (529-609)||(2832-2912)
[»] scaffold0224 (1 HSPs)
scaffold0224 (509-601)||(16082-16174)
[»] scaffold0008 (1 HSPs)
scaffold0008 (361-431)||(57836-57905)
[»] scaffold0552 (1 HSPs)
scaffold0552 (528-609)||(1087-1168)
[»] scaffold0038 (1 HSPs)
scaffold0038 (528-609)||(41739-41820)
[»] scaffold0472 (1 HSPs)
scaffold0472 (529-601)||(6151-6223)
[»] scaffold0004 (1 HSPs)
scaffold0004 (515-601)||(79797-79883)
[»] scaffold0025 (2 HSPs)
scaffold0025 (527-609)||(69547-69633)
scaffold0025 (527-609)||(73279-73365)
[»] scaffold0057 (1 HSPs)
scaffold0057 (531-588)||(16924-16981)
[»] scaffold0045 (1 HSPs)
scaffold0045 (515-598)||(85169-85251)
[»] scaffold0474 (1 HSPs)
scaffold0474 (288-337)||(10443-10492)


Alignment Details
Target: scaffold0154 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 12061 - 11729
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |       |||| ||||||||||||||||||||||||||||    
T  12061 tgttgtagtatgattcaaaatttgatggatggagaatattgttgctaaaaatataaaaaatttgtttcaaatatattttgtgctgaaaatatatttatgg 11962  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  11961 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 11862  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 576  Q
    ||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  11861 agaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttgaatcagagtaaacctggagatag 11762  T
Q  577 agggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||| |||||||||||| |||||    
T  11761 agggggctgaaacagggatttagaatgacaaca 11729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 237; Significance: 1e-131; HSPs: 92)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 53916082 - 53915750
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  53916082 tgttgtagtatgactcaaaatttgagggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 53915983  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  53915982 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 53915883  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 576  Q
    ||          ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  53915882 agaaaaaaaaacgtatcttgagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttgaatcagagtaaaccttaagatag 53915783  T
Q  577 agggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||| ||||| ||| |||||    
T  53915782 agggggctgaaacaagggtttaggatgacaaca 53915750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 1313082 - 1313412
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||| |||||||||| |||||||||||||||||    
T  1313082 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaatgatttgtttcaaatatattttgtgttgaaaatatatttatgg 1313181  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  1313182 acaataaatatatttctgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 1313281  T
Q  478 agnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagataga 577  Q
    ||         ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1313282 agaaaaaaaaagtatctttagtgtgatattcgttccaaatttatgagttatacttttactataaatatagaccttgaatcagagtaaaccttgagataga 1313381  T
Q  578 gggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||| |||| ||||||||||    
T  1313382 gggggctgaaacaagg-tttacaatggcaaca 1313412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 278 - 603
Target Start/End: Complemental strand, 27636212 - 27635887
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |       |||| ||||||||||||||||||||||||||||    
T  27636212 tgttgtagtatgatttaaaatttgatggatggagaatattgttgctaaaaatataaaatattagtttcaaatatattttgtgctgaaaatatatttatgg 27636113  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  27636112 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 27636013  T
Q  478 agnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttata-cttttactataaatatagaccttaaatcagagtaaaccttgagatag 576  Q
    ||         |||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||| ||| |||||||||||||||||||    
T  27636012 ag-aaaaaaatgtatcttcagtgtggtattcgttccaaatttatgagttatattttttactacaaatatagaccttgaattagagtaaaccttgagatag 27635914  T
Q  577 agggggctgaaacaaggatttagaatg 603  Q
    ||||||||||||||||| |||||||||    
T  27635913 agggggctgaaacaagggtttagaatg 27635887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 277 - 609
Target Start/End: Original strand, 51943041 - 51943374
Alignment:
Q  277 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatg 376  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||||||    
T  51943041 gtgttgtagtatgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 51943140  T
Q  377 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 476  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || |||||    
T  51943141 gacaataaatatatttttgtaccgtatgaagaatgatttgatgcaaatatattttgaaagggaatattatatttttgatgtaaatattctttcattgaag 51943240  T
Q  477 gag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 575  Q
    |||          ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  51943241 gagaaagaaaaacgtatcttcagtgtggtattcgttccaaatttatgatttatacttttactataaatatagaccttgaatcagagtaaacctggagata 51943340  T
Q  576 gagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||| |||||||||| | ||||||| |||||||    
T  51943341 gagggtgctgaaacaaaggtttagaaaggcaaca 51943374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 53918250 - 53917918
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||| |||| ||||||||||||    
T  53918250 tgttatagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgttgaacatatatttatgg 53918151  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  53918150 acaataaatatatttttttaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcattgaagg 53918051  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 576  Q
    ||          ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |    
T  53918050 agaaaaaaaaacgtatcttcagtgtggtattcgtttcaaatttatgagttatacttttactataaatatagaccttgaatcagattaaaccttgagatgg 53917951  T
Q  577 agggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||| | ||||||||| |||||    
T  53917950 agggggctgaaacaatggtttagaatgacaaca 53917918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 457950 - 458287
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||       |||| |||||||||||||||||||||||| |||    
T  457950 tgttgtagtatgactcaaaatttgatggatggggaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttgtgg 458049  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  458050 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 458149  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 571  Q
    ||           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||||||    ||    
T  458150 agaaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaaccttgagaga 458249  T
Q  572 gatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  458250 gatagagggggctgaaacaagggtttagaaaggcaaca 458287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 278 - 601
Target Start/End: Original strand, 746422 - 746752
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  746422 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 746521  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  746522 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 746621  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt------g 570  Q
    ||          ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||      |    
T  746622 agaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 746721  T
Q  571 agatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||||| |||||||    
T  746722 agatagagggggctgaaacaagggtttagaa 746752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 455573 - 455910
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||       |||| |||||||||||||||||||||||| |||    
T  455573 tgttgtagtatgactcaaaatttgatggatggggaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttgtgg 455672  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  455673 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 455772  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 571  Q
    ||           |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||||||    ||    
T  455773 agaaaaaaaaaacgtatcttcagtgcggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaaccttgagaga 455872  T
Q  572 gatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  455873 gatagagggggctgaaacaagggtttagaaaggcaaca 455910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 278 - 578
Target Start/End: Complemental strand, 10622127 - 10621827
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||| |||||||||| ||||||||||||    
T  10622127 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaagatatatttatgg 10622028  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  10622027 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 10621928  T
Q  478 agnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagataga 577  Q
    ||         ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| |||||| |||    
T  10621927 agaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagaga 10621828  T
Q  578 g 578  Q
    |    
T  10621827 g 10621827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 276 - 609
Target Start/End: Original strand, 25533105 - 25533445
Alignment:
Q  276 agtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttat 375  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||| ||||||||||||||||||    
T  25533105 agtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttttgctgaaaatatatttat 25533204  T
Q  376 ggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaa 475  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  25533205 ggacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaa 25533304  T
Q  476 ggagnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt------ 569  Q
    ||||         |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||          
T  25533305 ggag-aaaaaaacgtatcttcagtgtgatatttgttctaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagaga 25533403  T
Q  570 --gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
      |||||||||||||||||||||||| ||||||| |||||||    
T  25533404 gagagatagagggggctgaaacaagggtttagaaaggcaaca 25533445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 280 - 552
Target Start/End: Original strand, 42989954 - 42990228
Alignment:
Q  280 ttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatggac 379  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |       |||| ||||||| |||||||| |||||||||||||    
T  42989954 ttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaaatttgtttcaaatatattttttgctgaaagtatatttatggac 42990053  T
Q  380 aataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag 479  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||    
T  42990054 aataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagagaatattatatttttgatgcaaatattctttcactgaaggag 42990153  T
Q  480 --nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacctt 552  Q
               ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42990154 aaaaaaaaaatgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagacctt 42990228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 42991953 - 42992289
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||        |||| ||||||||||||||||||||||||||||    
T  42991953 tgttgtagtatgactcaaaatttgatggatggagaatattgttgttaaaaatataaaaggtttgtttcaaatatattttgtgctgaaaatatatttatgg 42992052  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  42992053 acaataaatatatttttgtattgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 42992152  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gag 572  Q
    ||          |||||||||||||  ||||  ||||||||||||||||||||||||||||||||||||| |||||  ||||   ||||| ||    |||    
T  42992153 agaaaaaaaaacgtatcttcagtgtaatattaattccaaatttatgagttatacttttactataaatatataccttgtatcatgctaaactttaagagag 42992252  T
Q  573 atagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||| |||| || |||||||    
T  42992253 atagagggggctgaaacaagggtttaaaaaggcaaca 42992289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 4104483 - 4104149
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||       |||| ||| ||| ||||||||||||||||||||    
T  4104483 tgttgtagtatgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatactttatgctgaaaatatatttatgg 4104384  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  4104383 acaataaatatatttttgtatcgtatgaaggacgatttgatgcaaatatattttgaaagggaatattatattttttatgcaaatattctttcactgaagg 4104284  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 571  Q
    ||           |||   ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||    ||    
T  4104283 agaaaaaaaaaacgta---tcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagaga 4104187  T
Q  572 gatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  4104186 gatagagggggctgaaacaagggtttagaaaggcaaca 4104149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 277 - 578
Target Start/End: Original strand, 41848803 - 41849114
Alignment:
Q  277 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatg 376  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||||||    
T  41848803 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 41848902  T
Q  377 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 476  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||  ||||||     
T  41848903 gacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaaaggaatattatatttttgatgcaaatattctttaactgaaa 41849002  T
Q  477 gag----------nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaac 566  Q
    |||                   ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||  |||||  |||||    
T  41849003 gagaaaaaaaaaaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagacattgtatcaggctaaac 41849102  T
Q  567 cttgagatagag 578  Q
     |||||| ||||    
T  41849103 tttgagagagag 41849114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 489 - 609
Target Start/End: Original strand, 6561694 - 6561813
Alignment:
Q  489 gtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 588  Q
    |||||||||||||| |||||||||||||||||||||||||| || | |||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  6561694 gtatcttcagtgtgatattcgttccaaatttatgagttatatttct-ctataaatatagaccttgtatcagagtaaaccttgagatagagggggctgaaa 6561792  T
Q  589 caaggatttagaatggcaaca 609  Q
    ||||| ||||||| |||||||    
T  6561793 caagggtttagaaaggcaaca 6561813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 15780781 - 15780863
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||||||||||| | |||||||||||||||||||||||| |||||||||||||||    
T  15780781 atacttttactataaatatagaccttgtatcagagtaaacttggagatagagggggctgaaacaagggtttagaatggcaaca 15780863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 509 - 601
Target Start/End: Original strand, 23633363 - 23633455
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||| ||||||||  ||||||||||||||||||||||| ||  |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  23633363 gttccaattttatgagggatacttttactataaatatagactttgtatcagagtaaaccttgagatagagagggctaaaacaaggatttagaa 23633455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 515 - 601
Target Start/End: Complemental strand, 28761776 - 28761690
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||  ||||||||||||||||||||||| ||  |||||||||||||||||||||||||||| |||||||||| |||||||    
T  28761776 aatttatgagggatacttttactataaatatagactttgcatcagagtaaaccttgagatagagggggttgaaacaagggtttagaa 28761690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 11170327 - 11170407
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  11170327 acttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 11170407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 1627016 - 1626937
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  1627016 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 1626937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 515 - 609
Target Start/End: Complemental strand, 880800 - 880706
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||  || |||||||||||||||||||| ||  ||||| ||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  880800 aatttatgagggatgcttttactataaatatagacattgtatcagtgtaaaccttgagatagaggggtctgaaacaagagtttagaatggcaaca 880706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 531 - 609
Target Start/End: Complemental strand, 10956359 - 10956281
Alignment:
Q  531 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||  |||||||||||| |  ||||||||||||||||||||||| |||||||||||||||    
T  10956359 ttttactataaatatagaccttgtatcagagtaaacatgaagatagagggggctgaaacaagggtttagaatggcaaca 10956281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 531 - 609
Target Start/End: Complemental strand, 10958655 - 10958577
Alignment:
Q  531 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||  |||||||||||| |  ||||||||||||||||||||||| |||||||||||||||    
T  10958655 ttttactataaatatagaccttgtatcagagtaaacataaagatagagggggctgaaacaagggtttagaatggcaaca 10958577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 45882860 - 45882942
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||| |||||||  ||||||||||||||||||||||||| ||||||| |||||||    
T  45882860 atacttttactataaatatagaccttgtatcatagtaaactatgagatagagggggctgaaacaagggtttagaaaggcaaca 45882942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 528 - 609
Target Start/End: Complemental strand, 4308616 - 4308535
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  4308616 tactttcactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 4308535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 509 - 598
Target Start/End: Original strand, 53597144 - 53597232
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggattta 598  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||  ||||||||||||||||||||||| |||| |||||||||| ||||    
T  53597144 gttccaattttatgagggatacttttactataaatatagaccttgtatcagagtaaaccttgagataga-ggggatgaaacaagggttta 53597232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 3859451 - 3859531
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  3859451 acttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 3859531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 5522949 - 5522869
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  5522949 acttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 5522869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 11163073 - 11163153
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||| |||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  11163073 acttttacgataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 11163153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 509 - 601
Target Start/End: Original strand, 24979611 - 24979702
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||| | ||| ||||||| |||||||||||| |||||  |||||||||||| |||||||||||||||||||||||||| |||||||    
T  24979611 gttccaaattt-taagtaatactttcactataaatatataccttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaa 24979702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 527 - 606
Target Start/End: Original strand, 1321362 - 1321441
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggca 606  Q
    ||||||||||||||||||||||| ||  ||||||| |||| |||||||||||||||||||||||||| ||||||| ||||    
T  1321362 atacttttactataaatatagactttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggca 1321441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 278 - 337
Target Start/End: Original strand, 6561613 - 6561672
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaga 337  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  6561613 tgttgtagtatgactcgaaatttgatggatgaagaatattgttgctaaaaatataaaaga 6561672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 361 - 444
Target Start/End: Original strand, 11066346 - 11066429
Alignment:
Q  361 tgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 444  Q
    |||||||| ||||||||||||||||||||||||| |||| ||||||| |  |||||||||||||||||||| |||| |||||||    
T  11066346 tgaaaatacatttatggacaataaatatatttttttaccatatgaaggaatatttgatgcaaatatatttttaaagagaatatt 11066429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 28137628 - 28137549
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||  | ||  ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  28137628 cttttactataaatatatgcgttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 28137549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 47701928 - 47701849
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||| ||||||||||||||||| ||||||| |||||||    
T  47701928 cttttactataaatatagacattgtatcagtgtaaaccttgagataaagggggctgaaacaagggtttagaaaggcaaca 47701849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 53468788 - 53468709
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| ||  ||||| ||||||||| ||||| ||||||||||||||||| |||||||||||||||    
T  53468788 cttttactataaatatagacattgtatcagtgtaaacctttagataaagggggctgaaacaagggtttagaatggcaaca 53468709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 515 - 609
Target Start/End: Complemental strand, 890119 - 890025
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||  || |||||||||||||||||||  ||  ||||| |||||||||||||||||||  |||||||||||| |||||||||||||||    
T  890119 aatttatgagggatgcttttactataaatatagatattgtatcagtgtaaaccttgagatagaggaagctgaaacaagggtttagaatggcaaca 890025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 531 - 609
Target Start/End: Original strand, 6231374 - 6231452
Alignment:
Q  531 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||| ||  ||||| ||||| |||||||||||| |||||||||||||||||||||| |||||||    
T  6231374 ttttactataaatatagacattgtatcagtgtaaatcttgagatagagcgggctgaaacaaggatttagaaaggcaaca 6231452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 26720469 - 26720551
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  ||||||| |||| | ||||||||||||||||||| |||| ||||||| |||||||    
T  26720469 atacttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaataagggtttagaaaggcaaca 26720551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 48362006 - 48361925
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||| ||||||| |||||||| ||||||||||||||||| ||||||||| |||||    
T  48362006 atacttttactataaatatagaccttgtatcatagtaaactttgagatacagggggctgaaacaagg-tttagaatgacaaca 48361925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 528 - 609
Target Start/End: Complemental strand, 51727341 - 51727260
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||||||  ||||||| |||| |||||||| ||||||||||||||||| ||||||| |||||||    
T  51727341 tactttcactataaatatagaccttgtatcagagcaaactttgagataaagggggctgaaacaagggtttagaaaggcaaca 51727260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 433
Target Start/End: Complemental strand, 54287559 - 54287487
Alignment:
Q  361 tgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttga 433  Q
    |||||||||||||||||| |||||||| |||||||||| |||||||| |  ||||||||||||||||||||||    
T  54287559 tgaaaatatatttatggataataaatacatttttgtactgtatgaaggaatatttgatgcaaatatattttga 54287487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 530 - 601
Target Start/End: Original strand, 36011751 - 36011822
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||| ||  || || ||||||||||||||| |||||||||||||||||||||||||    
T  36011751 cttttactataaatatagacattgtattagtgtaaaccttgagataaagggggctgaaacaaggatttagaa 36011822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 43423796 - 43423717
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| ||  ||||  ||||||||||||| ||||||||||||||||||| ||||||| |||||||    
T  43423796 cttttactataaatatagacattgtatcactgtaaaccttgagaaagagggggctgaaacaagggtttagaaaggcaaca 43423717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 515 - 601
Target Start/End: Original strand, 3314593 - 3314679
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||  || |||||||||||||||||||  ||  ||||| |||||||||||||||||||||||||||| |||| |||||||    
T  3314593 aatttatgagggatgcttttactataaatatagatattgtatcagtgtaaaccttgagatagagggggctgaaataagggtttagaa 3314679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 601
Target Start/End: Complemental strand, 12268302 - 12268228
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||||| |||  |||||||||||| ||||||||||||| |||||||||||  |||||||    
T  12268302 atacttttactataaatatagaacttgtatcagagtaaactttgagatagagggagctgaaacaagagtttagaa 12268228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 22114639 - 22114561
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaa 607  Q
    ||||||||||||||||||||||||  ||||||| |||| | |||||||| ||||||||||||||| ||||||| |||||    
T  22114639 acttttactataaatatagaccttgtatcagagcaaacttggagatagaaggggctgaaacaagggtttagaaaggcaa 22114561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 531 - 609
Target Start/End: Complemental strand, 43421747 - 43421669
Alignment:
Q  531 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||| ||  ||||| ||||||||||||||||| |||| |||||||||| ||||||| |||||||    
T  43421747 ttttactataaatatagacattgtatcagtgtaaaccttgagatagaaggggttgaaacaagggtttagaaaggcaaca 43421669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 363 - 428
Target Start/End: Complemental strand, 53974077 - 53974011
Alignment:
Q  363 aaaatatatttatggacaataaatatatttttgtaccgtatg-aagaacgatttgatgcaaatatat 428  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||| | ||||||||||||||||||    
T  53974077 aaaatatatttatagacaataaatatatttttgtaccgtatgaaaggaagatttgatgcaaatatat 53974011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 6066131 - 6066050
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagag-ggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  |||| || |||| ||||||||||| ||||||||||||||| ||||||| |||||||    
T  6066131 acttttactataaatatagaccttgtatcaaagcaaactttgagatagaggggggctgaaacaagggtttagaaaggcaaca 6066050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 18097235 - 18097154
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaacctt-gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  |||| ||||||| |  ||||||||||||||| |||||||| |||||||||||||||    
T  18097235 acttttactataaatatagaccttgtatcatagtaaacttgagagatagagggggctcaaacaagggtttagaatggcaaca 18097154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 18099504 - 18099424
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaacctt-gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||| ||||||||||  |||||||||||| |  |||||||||||||||||||||||| |||||||||||||||    
T  18099504 acttttactataa-tatagaccttgtatcagagtaaacttgagagatagagggggctgaaacaagggtttagaatggcaaca 18099424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 32264379 - 32264293
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagta----aaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||||||||    ||| ||||||||||||||||| |||||||| ||||||| |||||||    
T  32264379 atacttttactataaatatagaccttgtatcagagtaaattaactttgagatagagggggctcaaacaagggtttagaaaggcaaca 32264293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 528 - 609
Target Start/End: Complemental strand, 35918284 - 35918203
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||||||  |||| || |||  |||||||||||||||||||||||||| ||||||| |||||||    
T  35918284 tactttcactataaatatagaccttgtatcatagcaaattttgagatagagggggctgaaacaagggtttagaaaggcaaca 35918203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 528 - 609
Target Start/End: Original strand, 43226008 - 43226089
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||| ||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  43226008 tactttcactataaatatagacattgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 43226089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 5191576 - 5191656
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  |||  || |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  5191576 acttttactataaatatagaccttgtatctaagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 5191656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 509 - 609
Target Start/End: Original strand, 32218999 - 32219098
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaac 608  Q
    ||||||||||| | ||| ||||||| | ||||||||||||||||  ||| || ||||| |||||||||||||||||||||||||| || |||| ||||||    
T  32218999 gttccaaattt-taagtaatactttcagtataaatatagaccttgtatctgactaaactttgagatagagggggctgaaacaagggttcagaaaggcaac 32219097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 529 - 601
Target Start/End: Original strand, 35777344 - 35777416
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||| ||  |||| || |||| |||||||||||||||||||||||||| |||||||    
T  35777344 acttttactataaatatagacattgtatcaaagcaaactttgagatagagggggctgaaacaagggtttagaa 35777416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 530 - 601
Target Start/End: Complemental strand, 5927097 - 5927026
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||| ||  ||| | |||||||||||||||||| |||||||||||||| |||||||    
T  5927097 cttttactataaatatagacattgtatcggtgtaaaccttgagatagagagggctgaaacaagggtttagaa 5927026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 6063782 - 6063700
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgaga--tagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  |||| || |||| ||||||  |||||||||||||||||||| ||||||| |||||||    
T  6063782 acttttactataaatatagaccttgtatcaaagcaaactttgagagatagagggggctgaaacaagggtttagaaaggcaaca 6063700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 530 - 601
Target Start/End: Complemental strand, 28100374 - 28100303
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||  | ||  |||||||||| |||||||||||||||||||||||||||| |||||||    
T  28100374 cttttactataaatataagcgttgtatcagagtaacccttgagatagagggggctgaaacaagggtttagaa 28100303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 28102335 - 28102256
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||  | ||  || ||||||| |||||||||||||||||||||||||||| ||||||| |||||||    
T  28102335 cttttactataaatataagcgttgtattagagtaacccttgagatagagggggctgaaacaagggtttagaaaggcaaca 28102256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 531 - 601
Target Start/End: Original strand, 3306724 - 3306794
Alignment:
Q  531 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||| ||  ||||| |||||||| |||||| ||||||||||||||||| |||||||    
T  3306724 ttttactataaatatagacattgtatcagtgtaaacctagagatatagggggctgaaacaagggtttagaa 3306794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 358 - 428
Target Start/End: Original strand, 11072731 - 11072801
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatat 428  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||||| | | | ||||||||||||||||||    
T  11072731 tgctgaaaatacatttatggacaacaaatagatttttgtaccgtattacggaagatttgatgcaaatatat 11072801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 530 - 588
Target Start/End: Original strand, 28180948 - 28181006
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 588  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||    
T  28180948 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaa 28181006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 531 - 601
Target Start/End: Complemental strand, 51675087 - 51675017
Alignment:
Q  531 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||| ||  ||||  |||||| |||||||||||||||||||||||||| |||||||    
T  51675087 ttttactataaatatagacgttgtatcaatgtaaacgttgagatagagggggctgaaacaagggtttagaa 51675017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 528 - 593
Target Start/End: Original strand, 6484307 - 6484372
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaagg 593  Q
    ||||||| |||||||||||| | ||  ||||| |||||||||||||||||||||||||||||||||    
T  6484307 tacttttgctataaatataggcattgtatcagtgtaaaccttgagatagagggggctgaaacaagg 6484372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 528 - 609
Target Start/End: Original strand, 43228213 - 43228294
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||| ||  ||||||| |||| | |||||||||||||||||||||||  ||||||| |||||||    
T  43228213 tactttcactataaatatagacattgtatcagagcaaacttggagatagagggggctgaaacaagagtttagaaaggcaaca 43228294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 601
Target Start/End: Original strand, 53591105 - 53591190
Alignment:
Q  516 atttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||  || |||||||||||||||||||| ||  || || ||||||||||||||||||| ||||||||||||  |||||||    
T  53591105 atttatgaggaatgcttttactataaatatagacattgtataagtgtaaaccttgagatagaggaggctgaaacaagagtttagaa 53591190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 517 - 601
Target Start/End: Original strand, 23636938 - 23637022
Alignment:
Q  517 tttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||  ||| ||||| |||||||||| || ||  ||||||||||||||||||||||||| |||| |||||||| |||||||    
T  23636938 tttatgagggataattttaatataaatatatactttgtatcagagtaaaccttgagatagaggaggctaaaacaagggtttagaa 23637022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 515 - 601
Target Start/End: Original strand, 31151256 - 31151344
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcaga-gtaaaccttgagatagagggggctg-aaacaaggatttagaa 601  Q
    ||||||||||  || |||||||||||||||||||| ||  |||||| |||||||| |||||||||||||||| |||||||| |||||||    
T  31151256 aatttatgagggatgcttttactataaatatagactttgtatcagatgtaaacctcgagatagagggggctgaaaacaagggtttagaa 31151344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 588
Target Start/End: Original strand, 24177200 - 24177261
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 588  Q
    ||||||||| ||||||||||||||||  |||| ||||||| ||||| |||||||||||||||    
T  24177200 atacttttattataaatatagaccttgtatcatagtaaacattgagctagagggggctgaaa 24177261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 528 - 609
Target Start/End: Original strand, 39715392 - 39715472
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||| |||||||||||||| ||  ||||| ||||||||||||||||| |||||||||| |||| ||||||  |||||||    
T  39715392 tacttttgctataaatatagacattgtatcagtgtaaaccttgagataga-ggggctgaaataagggtttagagaggcaaca 39715472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 53974197 - 53974148
Alignment:
Q  288 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaga 337  Q
    ||||||||||||||||||||| ||||| |||||| |||||||||||||||    
T  53974197 tgactcaaaatttgatggatgaagaatgttgttgttaaaaatataaaaga 53974148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 509 - 601
Target Start/End: Complemental strand, 1619012 - 1618917
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt--gagatagagggggctg-aaacaaggatttagaa 601  Q
    ||||||| ||||||||  ||||||| ||||||||||||||||||  | || ||||||||||  |||| ||||||||||| |||||||| |||||||    
T  1619012 gttccaattttatgagggatactttgactataaatatagaccttgtaccatagtaaaccttgagagacagagggggctgaaaacaagggtttagaa 1618917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 18162585 - 18162666
Alignment:
Q  527 atacttttactataaatatagaccttaaatca-gagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||| |||||||| | ||||||||  ||| |||||||||| ||||||| |||||||    
T  18162585 atacttttactataaatatagaccttgtatcatgagtaaacttggagataga--gggatgaaacaagggtttagaaaggcaaca 18162666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 318
Target Start/End: Original strand, 27000083 - 27000123
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattg 318  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  27000083 tgttgtagtatgactgaaaatttgatggatggagaatattg 27000123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 529 - 601
Target Start/End: Original strand, 50493922 - 50493994
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||| ||||||||||||||||||  |||| || ||||   |||||||||||||||||||||||| |||||||    
T  50493922 actttcactataaatatagaccttgtatcaaagcaaactgagagatagagggggctgaaacaagggtttagaa 50493994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 47149233 - 47149149
Alignment:
Q  530 cttttactataaatatagaccttaaatcaga-gtaaaccttgag----atagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||||  |||||| |||  |||||||    ||||||||||||||||||||| ||||||| |||||||    
T  47149233 cttttactataaatatagaccttgtatcagatgtaggccttgagggagatagagggggctgaaacaagggtttagaaaggcaaca 47149149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 530 - 601
Target Start/End: Complemental strand, 54691906 - 54691836
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||| | ||  ||||||||||||||| |||||||||||| | |||||||| |||||||    
T  54691906 cttttactataaatataggctttgtatcagagtaaaccttaagatagaggggg-taaaacaaggttttagaa 54691836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 334
Target Start/End: Original strand, 11072644 - 11072690
Alignment:
Q  288 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaa 334  Q
    ||||||||||||||||||||| |||| |||||||| |||||||||||    
T  11072644 tgactcaaaatttgatggatgaagaagattgttgcaaaaaatataaa 11072690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 510 - 591
Target Start/End: Complemental strand, 4560618 - 4560537
Alignment:
Q  510 ttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaa 591  Q
    |||||| |||| |||  ||||||| ||||||| |||||||  |  |||| ||||||| ||||||||||||||||||||||||    
T  4560618 ttccaattttacgagggatactttcactataagtatagactatgtatcatagtaaacattgagatagagggggctgaaacaa 4560537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 517 - 573
Target Start/End: Original strand, 13419787 - 13419844
Alignment:
Q  517 tttatgagttatacttttactataaatatagaccttaaatcaga-gtaaaccttgaga 573  Q
    ||||||||  ||||||||||||||||||||||||||| |||||| ||||| |||||||    
T  13419787 tttatgagggatacttttactataaatatagaccttatatcagatgtaaaacttgaga 13419844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 530 - 607
Target Start/End: Complemental strand, 10084726 - 10084645
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaacaaggatttagaatggcaa 607  Q
    |||||||||||||||||||||||  ||| ||| |||| ||    |||||||||||||||| ||||||| ||||||| |||||    
T  10084726 cttttactataaatatagaccttgtatcggagcaaactttgagagagatagagggggctggaacaagggtttagaaaggcaa 10084645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 527 - 607
Target Start/End: Complemental strand, 10191649 - 10191565
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaacaaggatttagaatggcaa 607  Q
    ||||||||||||||||||||||||||  ||| ||| |||| ||    |||||| ||||||||| ||||||| ||||||| |||||    
T  10191649 atacttttactataaatatagaccttgtatcggagcaaactttgagagagataaagggggctggaacaagggtttagaaaggcaa 10191565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 527 - 598
Target Start/End: Complemental strand, 13420508 - 13420437
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggattta 598  Q
    |||||||||||||||||||||   ||  |||| || ||||||||||||| ||| ||||||||||||| ||||    
T  13420508 atacttttactataaatataggttttgtatcaaagcaaaccttgagatataggaggctgaaacaagggttta 13420437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 570 - 609
Target Start/End: Original strand, 30005805 - 30005844
Alignment:
Q  570 gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  30005805 gagatagagggggctgaaacaagggtttagaaaggcaaca 30005844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 570 - 609
Target Start/End: Original strand, 38890004 - 38890043
Alignment:
Q  570 gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  38890004 gagatagagggggctgaaacaagggtttagaaaggcaaca 38890043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 570 - 609
Target Start/End: Original strand, 42990268 - 42990307
Alignment:
Q  570 gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  42990268 gagatagagggggctgaaacaagggtttagaaaggcaaca 42990307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 529 - 584
Target Start/End: Complemental strand, 53896530 - 53896475
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggct 584  Q
    ||||| ||||||||||||||||||  |||| || |||| |||||||||||||||||    
T  53896530 actttcactataaatatagaccttgtatcaaagcaaactttgagatagagggggct 53896475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 530 - 609
Target Start/End: Original strand, 54884081 - 54884160
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||| ||||||||| || ||  ||||  |||||||||||||||||||| |||  ||||||| ||||||| |||||||    
T  54884081 cttttaccataaatataaacattggatcattgtaaaccttgagatagagggagctcgaacaagggtttagaaaggcaaca 54884160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 529 - 578
Target Start/End: Complemental strand, 6719445 - 6719396
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagag 578  Q
    ||||||||||||||||||||||||  ||||||| |||| |||||| ||||    
T  6719445 acttttactataaatatagaccttgtatcagagcaaactttgagagagag 6719396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 92)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 5100743 - 5101074
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||| ||||||||||||||||||||||||||||    
T  5100743 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgttttaaatatattttgtgctgaaaatatatttatgg 5100842  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  5100843 acaacaaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 5100942  T
Q  478 agnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagataga 577  Q
    ||         ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  5100943 agaaaaaaaacgtatcttcaatctggtattcgttccaaatttatgagttatacttttactataaatatagaccttgaatcagggtaaaccttgagataga 5101042  T
Q  578 gggggctgaaacaaggatttagaatggcaaca 609  Q
    |||| ||||||||| | ||||||||| |||||    
T  5101043 ggggactgaaacaaaggtttagaatgacaaca 5101074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 56030189 - 56030521
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  56030189 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 56030288  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||    
T  56030289 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttggtgcaaatattctttcactgaagg 56030388  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 576  Q
    ||          |||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| | ||  ||||||||||||||||||||||    
T  56030389 agaaaaaaaaaagtatcttcggtgtggtattctttccaaatttatgagttatatttttactataaatataggctttgtatcagagtaaaccttgagatag 56030488  T
Q  577 agggggctgaaacaaggatttagaatggcaaca 609  Q
    | ||||||||||||||| ||||||||| |||||    
T  56030489 aaggggctgaaacaagggtttagaatgacaaca 56030521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 14788021 - 14787687
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||       |||| |||||||||| |||||||||||||||||    
T  14788021 tgttgtagtatgactcaaaatttgatggatggagaataatgttgctaaaaatataaaagatttgtttcaaatatattttgtggtgaaaatatatttatgg 14787922  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  14787921 acaataaatatatttttgtaccgtataaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 14787822  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt--gagat 574  Q
    ||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | ||||| ||  |||||    
T  14787821 agaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttgtatcatactaaactttgagagat 14787722  T
Q  575 agagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||| |||||||||||||||    
T  14787721 agagggggctgaaacaagggtttagaatggcaaca 14787687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 17662826 - 17662490
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||        ||| ||||||||||||||||||||||||||||    
T  17662826 tgttgtagtatgactacaaatttgatggatggagaatattgttgctaaaaatataaaagatttgttttaaatatattttgtgctgaaaatatatttatgg 17662727  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  17662726 acaataaatatatttttgtaccgtacgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 17662627  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gag 572  Q
    ||          ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||| ||    |||    
T  17662626 agaaaaaaaaaagtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcagagcaaactttgagagag 17662527  T
Q  573 atagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  17662526 atagagggggctgaaacaagggtttagaaaggcaaca 17662490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 278 - 578
Target Start/End: Complemental strand, 22132987 - 22132686
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  22132987 tgttgtagtatgattcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 22132888  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  22132887 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 22132788  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 576  Q
    ||          ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| |||||| ||    
T  22132787 agaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 22132688  T
Q  577 ag 578  Q
    ||    
T  22132687 ag 22132686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 278 - 601
Target Start/End: Complemental strand, 44600428 - 44600102
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |||| |||| |||||||||||||||||||||||    
T  44600428 tgttgtagtatgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaatatatttatgg 44600329  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||    
T  44600328 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttaaaagggaatattatatttttgatgcaaatattctttcactgaagg 44600229  T
Q  478 ag---nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagat 574  Q
    ||            | ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||  || | || |||| |||||||    
T  44600228 aggaaaaaaaaaacgaatcttcagtgtggtatttgtttcaaatttatgagttatacttttactataaatatagaccttgtattaaagcaaactttgagat 44600129  T
Q  575 agagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||| |||||||    
T  44600128 agagggggctgaaacaagggtttagaa 44600102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 277 - 552
Target Start/End: Complemental strand, 22135220 - 22134943
Alignment:
Q  277 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatg 376  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||||||    
T  22135220 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 22135121  T
Q  377 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 476  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  22135120 gacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgattcaaatattctttcactgaag 22135021  T
Q  477 gag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacctt 552  Q
    |||           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22135020 gagaaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagacctt 22134943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 24347959 - 24348295
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||| ||||||||||||||||    
T  24347959 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgc-gaaaatatatttatgg 24348057  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  24348058 acaataaatatatttttgtattgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 24348157  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 571  Q
    ||           ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||   ||||| ||    ||    
T  24348158 agaaaaaaaaaaagtatcttcaatgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaagctaaactttgagaga 24348257  T
Q  572 gatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  24348258 gatagagggggctgaaacaagggtttagaaaggcaaca 24348295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 294 - 551
Target Start/End: Original strand, 30136331 - 30136589
Alignment:
Q  294 aaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatggacaataaatatatttt 393  Q
    ||||||||||| ||||||||||||||||||||||||||||||||       |||| |||| |||||||||||||||||||||||||||||||||||||||    
T  30136331 aaaatttgatgaatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaatatatttatggacaataaatatatttt 30136430  T
Q  394 tgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag--nnnnnnnnngta 491  Q
    ||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||| ||||||||||| || ||||||||           |||    
T  30136431 tgtactgtatgaagaacgatttgatgcaaatatattttaaaagagaatattatatttttgattcaaatattctttcattgaaggagaaaaaaaaaacgta 30136530  T
Q  492 tcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacct 551  Q
    ||||||||||| ||||||||| |||||||| ||||||| |||  ||||||||||| ||||    
T  30136531 tcttcagtgtgatattcgttctaaatttattagttata-tttctctataaatatatacct 30136589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 278 - 428
Target Start/End: Complemental strand, 47211308 - 47211158
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||||| |||||||||||||||    
T  47211308 tgttgtagtatgacttaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctcaaaatatatttatgg 47211209  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatat 428  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47211208 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatat 47211158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 385 - 601
Target Start/End: Original strand, 19322547 - 19322766
Alignment:
Q  385 atatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag----n 480  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||         
T  19322547 atatatttttgtactgtataaaggacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaaggagaaaaa 19322646  T
Q  481 nnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagaggg 580  Q
            ||||||||| |||| ||||| |||||||||||||||||||| ||   ||||||||||||| |||  ||||||||||||||||||||||||||    
T  19322647 aaagaaatgtatcttcaatgtgatattcattccaaatttatgagttata-ttcatctataaatatagatcttgtatcagagtaaaccttgagatagaggg 19322745  T
Q  581 ggctgaaacaaggatttagaa 601  Q
    || |||||||||| |||||||    
T  19322746 ggatgaaacaagggtttagaa 19322766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 278 - 479
Target Start/End: Complemental strand, 38890701 - 38890517
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||                |||||  |  ||||||||||||||    
T  38890701 tgttgtagcatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaga----------------tttgt--ttcaaatatatttatgg 38890620  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaaggg-aatattatatgtttgatgcaaatattcttccactgaag 476  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||| |||    
T  38890619 acaataaatatatttttgtattgtatgaaggacgatttgatgcaaatatattttgaaagggaaatattatatttttgatgcaaatattctttcactaaag 38890520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 406 - 609
Target Start/End: Original strand, 53404998 - 53405207
Alignment:
Q  406 agaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggagnnnnnnnnn---gtatcttcagtgtg 502  Q
    |||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| |||| ||||||            |||| |||||||||    
T  53404998 agaacgatttgatgcaaatatattttgaaaggaaaaattatatttttgatgcaaatattctttcactaaaggagaaaaaaaaaaacgtattttcagtgtg 53405097  T
Q  503 gtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagataga---gggggctgaaacaaggatttag 599  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| |||||| |||    ||||||||||||||| |||||    
T  53405098 gtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagatagaggggctgaaacaagggtttag 53405197  T
Q  600 aatggcaaca 609  Q
    || |||||||    
T  53405198 aaaggcaaca 53405207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 277 - 601
Target Start/End: Original strand, 10112625 - 10112942
Alignment:
Q  277 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatg 376  Q
    |||||||||||||||| |||||||| || ||| |||||||||||||||||||||||||||        |||| |||||||||||||||| ||||||||||    
T  10112625 gtgttgtagtatgacttaaaatttgttgaatgaagaatattgttgctaaaaatataaaag----gtttcaaatatattttgtgctgaaactatatttatg 10112720  T
Q  377 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 476  Q
    ||||||||||||||||||||| ||||||||| | ||||||||| ||||||| |||||||| |||||       ||||||||||||||| || |||| |||    
T  10112721 gacaataaatatatttttgtatcgtatgaaggaagatttgatgtaaatata-tttgaaagagaata-------tttgatgcaaatattatttcactaaag 10112812  T
Q  477 gag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttata-cttttactataaatatagaccttaaatcaga-gtaaaccttgag 572  Q
    |||           |||||||||| |||  || ||||||||||||||||||||||  ||||  ||||||||||||| ||  |||||| |||||||| |||    
T  10112813 gagaaaaaaaaaatgtatcttcagcgtgaaatccgttccaaatttatgagttatatttttttttataaatatagacattgtatcagatgtaaacctcgag 10112912  T
Q  573 atagagggggctg-aaacaaggatttagaa 601  Q
    | |||||| | || |||||||| |||||||    
T  10112913 agagagggagttgaaaacaagggtttagaa 10112942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 278 - 444
Target Start/End: Original strand, 9022060 - 9022225
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||| ||||||||| |||||||   |||||||||| | |||||||||| ||       |||| ||||||| |||||||||||||||||||     
T  9022060 tgttgtagtatgattcaaaattttatggatgagaaatattgttgttgaaaatataaatgatttgtttcaaatatattttttgctgaaaatatatttatg- 9022158  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 444  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  9022159 acaataaatatatttttctaccgtatgaagaaagatttgatgcaaatatattttaaaagggaatatt 9022225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 489 - 609
Target Start/End: Complemental strand, 47211122 - 47210996
Alignment:
Q  489 gtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt------gagatagaggggg 582  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||      |||||||||||||    
T  47211122 gtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagggagatagaggggg 47211023  T
Q  583 ctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||| ||||||| |||||||    
T  47211022 ctgaaacaagggtttagaaaggcaaca 47210996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 277 - 432
Target Start/End: Original strand, 9863498 - 9863650
Alignment:
Q  277 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatg 376  Q
    |||||||| |||||||||||||||| |||||| |  |||||||| ||||||||||||| ||       |||| |||||||||||| ||||||||||||||    
T  9863498 gtgttgtaatatgactcaaaatttgttggatgaaatatattgttactaaaaatataaatgatttgtttcaaacatattttgtgctaaaaatatatttatg 9863597  T
Q  377 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttg 432  Q
     |||||||||||||||||||   | |||||| | ||||||||||||||||||||||    
T  9863598 aacaataaatatatttttgt---gcatgaaggaagatttgatgcaaatatattttg 9863650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 22803072 - 22802990
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  22803072 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaatggcaaca 22802990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 48486314 - 48486396
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  48486314 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaatggcaaca 48486396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 489 - 609
Target Start/End: Complemental strand, 18709547 - 18709419
Alignment:
Q  489 gtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt--------gagatagaggg 580  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  || ||  ||||| ||        |||||||||||    
T  18709547 gtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtattaggctaaactttgagagagagagatagaggg 18709448  T
Q  581 ggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||| ||||||| |||||||    
T  18709447 ggctgaaacaagggtttagaaaggcaaca 18709419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 22801200 - 22801118
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||||||||| |||||    
T  22801200 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaatgacaaca 22801118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 358 - 444
Target Start/End: Complemental strand, 54929180 - 54929094
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 444  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||| ||  ||||||||    
T  54929180 tgctgaaaatatatttatggacaaaaaatatatttttgtaccgtatgaaggaagatttgatgcaaatatatttttaataggaatatt 54929094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 515 - 616
Target Start/End: Complemental strand, 24446929 - 24446828
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaacagctag 614  Q
    ||||||||||  || |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||    
T  24446929 aatttatgagggatgcttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaacaactag 24446830  T
Q  615 gg 616  Q
    ||    
T  24446829 gg 24446828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 5198415 - 5198497
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  5198415 atacttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 5198497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 515 - 609
Target Start/End: Original strand, 19095865 - 19095959
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||  || |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  19095865 aatttatgagggatgcttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaatgacaaca 19095959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 47274722 - 47274804
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  47274722 atacttttactataaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 47274804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 527 - 598
Target Start/End: Complemental strand, 619785 - 619714
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggattta 598  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||||    
T  619785 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggttta 619714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 358 - 437
Target Start/End: Original strand, 10979676 - 10979755
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagg 437  Q
    |||||||||||||||||||||||| |||||||||||||| | |||||||| | ||||||||||||||||||||| |||||    
T  10979676 tgctgaaaatatatttatggacaacaaatatatttttgtgctgtatgaaggaagatttgatgcaaatatatttttaaagg 10979755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 24888791 - 24888873
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  24888791 atacttttactataaatatagaccttgtatcagagcaaacttagagatagagggggctgaaacaagggtttagaaaggcaaca 24888873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 527 - 601
Target Start/End: Complemental strand, 40091753 - 40091679
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||||||||  |||| ||||||| |||||||||||||||||||||||||| |||||||    
T  40091753 atacttttactataaatatagaccttgtatcaaagtaaactttgagatagagggggctgaaacaagggtttagaa 40091679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 528 - 609
Target Start/End: Original strand, 36378288 - 36378369
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||| ||  |||||| |||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  36378288 tacttttactataaatatagactttgtatcagaataaaccttgagatagacggggctgaaacaagggtttagaaaggcaaca 36378369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 11434952 - 11435032
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  11434952 acttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 11435032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 509 - 601
Target Start/End: Complemental strand, 15032892 - 15032800
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||| ||||||||  ||||||||||||||||||||||| |   | ||||||||||||||||||| ||||||||||||||||| |||||||    
T  15032892 gttccaattttatgagggatacttttactataaatatagacttggtaccagagtaaaccttgagataaagggggctgaaacaagggtttagaa 15032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 3937543 - 3937465
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| || | ||||||||||||||||||||||||| |||||||||||| ||||||| |||||||    
T  3937543 cttttactataaatatagactttta-tcagagtaaaccttgagatagagggagctgaaacaagggtttagaaaggcaaca 3937465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 527 - 601
Target Start/End: Complemental strand, 8756588 - 8756513
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctg-aaacaaggatttagaa 601  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  8756588 atacttttactataaatatagaccttgtatcagagtaaaccttgagatagaaggggctgaaaacaagggtttagaa 8756513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 278 - 337
Target Start/End: Complemental strand, 14789571 - 14789512
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaga 337  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  14789571 tgttgtagtatgactcaaaatttgatggatgaagaataatgttgctaaaaatataaaaga 14789512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 515 - 601
Target Start/End: Complemental strand, 18537821 - 18537734
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctg-aaacaaggatttagaa 601  Q
    ||||||||||| || ||||||||||||||||||| |||  |||||||||||| |||||||||||||||||| |||||||| |||||||    
T  18537821 aatttatgagtgatgcttttactataaatatagatcttgtatcagagtaaacattgagatagagggggctgaaaacaagggtttagaa 18537734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 280 - 379
Target Start/End: Original strand, 19322410 - 19322510
Alignment:
Q  280 ttgtagtatgactcaaaatttgatggatggagaata-ttgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgga 378  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||        ||| ||||||| | |||||||||||||||||||    
T  19322410 ttgtagtatgactcaaaatttgatggatggagaatattttttgctaaaaatataaaagatttgttttaaatatattttatactgaaaatatatttatgga 19322509  T
Q  379 c 379  Q
    |    
T  19322510 c 19322510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 22044728 - 22044646
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||| ||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  22044728 atacttttactataaatataggccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 22044646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 515 - 609
Target Start/End: Complemental strand, 38928528 - 38928434
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||  || |||||||||||||||||| | ||  || |||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  38928528 aatttatgagggattcttttactataaatataggctttgtattagagtaaaccttgagatagagggggctgaaacaagagtttagaaaggcaaca 38928434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 51015241 - 51015323
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||| ||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  51015241 atacttttactataaatatagactttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 51015323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 528 - 609
Target Start/End: Original strand, 6764835 - 6764916
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||||||  ||||||| |||| |||||||||| ||||||||||||||| ||||||| |||||||    
T  6764835 tactttcactataaatatagaccttgtatcagagcaaactttgagatagaaggggctgaaacaagggtttagaaaggcaaca 6764916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 36919925 - 36919841
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttg--agatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||||||||||| |||  ||||| ||||||||||||||||| ||||||| |||||||    
T  36919925 atacttttactataaatatagaccttgtatcagagtaaactttgatagatatagggggctgaaacaagggtttagaaaggcaaca 36919841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 528 - 609
Target Start/End: Original strand, 40637070 - 40637151
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  40637070 tactttcactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 40637151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 530 - 609
Target Start/End: Original strand, 2891314 - 2891394
Alignment:
Q  530 cttttactataaatatagacctta-aatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| ||  |||||| ||||||||| ||||||||||||||||||||||| ||||||| |||||||    
T  2891314 cttttactataaatatagacattgtaatcagtgtaaaccttaagatagagggggctgaaacaagggtttagaaaggcaaca 2891394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 517 - 609
Target Start/End: Complemental strand, 12396193 - 12396101
Alignment:
Q  517 tttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||  || |||||||||||||||||||| ||  || |  ||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  12396193 tttatgagggatgcttttactataaatatagacattgtataaatgtaaaccttgagatagatggggctgaaacaaggatttagaaaggcaaca 12396101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 517 - 609
Target Start/End: Complemental strand, 12401155 - 12401063
Alignment:
Q  517 tttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||  || |||||||||||||||||||| ||  || |  ||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  12401155 tttatgagggatgcttttactataaatatagacattgtataaatgtaaaccttgagatagatggggctgaaacaaggatttagaaaggcaaca 12401063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 38270321 - 38270242
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||||| | ||||||||||||| ||||||| |||||||    
T  38270321 cttttactataaatatagacattgtatcagtgtaaaccttgagatagaagaggctgaaacaagggtttagaaaggcaaca 38270242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 22047023 - 22046941
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||| ||||  ||| ||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  22047023 atacttttactataaatataggccttgtatcggagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 22046941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 601
Target Start/End: Original strand, 24878984 - 24879058
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||||||||  ||| |||||||| | |||||||||||||||||||| ||| |||||||    
T  24878984 atacttttactataaatatagaccttgtatccgagtaaacttggagatagagggggctgaaactagggtttagaa 24879058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 531 - 601
Target Start/End: Complemental strand, 33415821 - 33415751
Alignment:
Q  531 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||| |||||||| | ||  ||||||||||||||||||||||||||||||||||||||| |||||||    
T  33415821 ttttactacaaatataggctttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaa 33415751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 531 - 609
Target Start/End: Complemental strand, 37313400 - 37313322
Alignment:
Q  531 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||   ||  |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  37313400 ttttactataaatataggttttgtatcaaagtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 37313322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 509 - 601
Target Start/End: Complemental strand, 16186193 - 16186100
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggct-gaaacaaggatttagaa 601  Q
    ||||||| |||| |||  |||||||||||||||||||| |||||  ||||||||||||||||||| ||||||||||  |||||||| |||||||    
T  16186193 gttccaattttaggagggatacttttactataaatataaaccttgtatcagagtaaaccttgagagagagggggctaaaaacaagggtttagaa 16186100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 515 - 588
Target Start/End: Complemental strand, 18535179 - 18535106
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 588  Q
    ||||||||||  || ||||||| ||||||||||||||  | |||||||||||||||||||||||||||||||||    
T  18535179 aatttatgagggatgcttttacaataaatatagacctcgattcagagtaaaccttgagatagagggggctgaaa 18535106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 529 - 601
Target Start/End: Complemental strand, 9174482 - 9174410
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||||||  |||| || |||| | |||||||||||||||||||||||| |||||||    
T  9174482 acttttactataaatatagaccttgtatcaaagcaaacttggagatagagggggctgaaacaagggtttagaa 9174410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 529 - 601
Target Start/End: Complemental strand, 16934479 - 16934407
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||||||  |||| || |||| ||||||||||||||||||| |||||| |||||||    
T  16934479 acttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgatacaagggtttagaa 16934407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 18847150 - 18847230
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  |||| |  |||| ||||||||||||||| |||||||||| ||||||| |||||||    
T  18847150 acttttactataaatatagaccttgtatcaaaacaaactttgagatagagggggttgaaacaagggtttagaaaggcaaca 18847230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 509 - 609
Target Start/End: Complemental strand, 52942802 - 52942702
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagacctt--aaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggca 606  Q
    ||||||||||| | ||| ||||||| ||||||||||||||||||  | |||||| ||||| |||||||||||||| ||||||||||| ||||||| ||||    
T  52942802 gttccaaattt-taagtaatactttcactataaatatagaccttgtatatcagactaaactttgagatagagggg-ctgaaacaagggtttagaaaggca 52942705  T
Q  607 aca 609  Q
    |||    
T  52942704 aca 52942702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 24880446 - 24880528
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  ||| |||||||| | ||||||||||||||  |||| ||| ||||||| |||||||    
T  24880446 atacttttactataaatatagaccttgtatcggagtaaacttggagatagagggggcgtaaactagggtttagaaaggcaaca 24880528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 288 - 444
Target Start/End: Complemental strand, 38209259 - 38209098
Alignment:
Q  288 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatg--gacaata-- 383  Q
    ||||||||||||||||||||| | |||||||||| |||||||||||||||        ||| ||||||||||||  ||  | |||  ||  || ||||      
T  38209259 tgactcaaaatttgatggatgaaaaatattgttgttaaaaatataaaagatttgttttaaatatattttgtgcttcaagaagattgttgttgaaaatata 38209160  T
Q  384 aatatatttttgtaccgtatgaagaacgatttgatgcaaatatat-tttgaaagggaatatt 444  Q
    ||||||||||||||| |||||||| | |||||||||||||||||| ||||||| ||||||||    
T  38209159 aatatatttttgtactgtatgaaggaagatttgatgcaaatatatatttgaaaaggaatatt 38209098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 534 - 592
Target Start/End: Original strand, 41997494 - 41997552
Alignment:
Q  534 tactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaag 592  Q
    |||||||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||    
T  41997494 tactataaatatagactttgtatcagagtaaaccttgagataaagggggctgaaacaag 41997552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 9148246 - 9148330
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgaga--tagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||| ||||  ||||||| |||| ||||||  |||||||||||||| ||||| ||||||| |||||||    
T  9148246 atacttttactataaatataggccttgtatcagagcaaactttgagagatagagggggctgaagcaagggtttagaaaggcaaca 9148330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 532 - 601
Target Start/End: Complemental strand, 9176807 - 9176738
Alignment:
Q  532 tttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||||  |||| || |||| | |||||||||||||||||||||||| |||||||    
T  9176807 tttactataaatatagaccttgtatcaaagcaaacttggagatagagggggctgaaacaagggtttagaa 9176738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 528 - 609
Target Start/End: Original strand, 14633316 - 14633396
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||||||  |||||||||||| ||||||||||  |||||||||||| | ||||||| |||||||    
T  14633316 tactttcactataaatatagaccttgtatcagagtaaactttgagataga-agggctgaaacaaaggtttagaaaggcaaca 14633396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 37089710 - 37089627
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaacctt---gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  |||||  ||||| |    |||||||||||||||||||||||| |||||||||||||||    
T  37089710 acttttactataaatatagaccttgtatcaggctaaacttgagagagatagagggggctgaaacaagggtttagaatggcaaca 37089627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 528 - 609
Target Start/End: Original strand, 47868397 - 47868478
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||||||  ||||||| |||| | ||||||||| ||||||||| |||| ||||||| |||||||    
T  47868397 tactttcactataaatatagaccttgtatcagagcaaacttggagatagagagggctgaaagaagggtttagaaaggcaaca 47868478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 529 - 601
Target Start/End: Complemental strand, 16932125 - 16932053
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||| |||||  |||| || |||| ||||||||||||||||||| |||||| |||||||    
T  16932125 acttttactataaatataaaccttgtatcaaagcaaactttgagatagagggggctgatacaagggtttagaa 16932053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 7941316 - 7941398
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgaga--tagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||| ||  ||||||| |||||  ||||  |||||||||||||||||||| ||||||| |||||||    
T  7941316 acttttactataaatatagacgttgtatcagagcaaaccgggagagatagagggggctgaaacaagggtttagaaaggcaaca 7941398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 420
Target Start/End: Complemental strand, 29609897 - 29609838
Alignment:
Q  361 tgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgc 420  Q
    |||||||||||||||| | | |||||||||||||||||||||||||| | ||||||||||    
T  29609897 tgaaaatatatttatgaagagtaaatatatttttgtaccgtatgaaggaagatttgatgc 29609838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 528 - 609
Target Start/End: Complemental strand, 2485210 - 2485128
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatag-agggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||||||  ||||||| |||| ||||| ||| |||||||| |||||||| ||||||| |||||||    
T  2485210 tactttcactataaatatagaccttgtatcagagcaaactttgagctagaagggggctaaaacaagggtttagaaaggcaaca 2485128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 31849937 - 31849855
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||| ||||||||  |||  ||||||| ||||   |||||||||||||||||||||||| ||||||| |||||||    
T  31849937 atacttttactagaaatataggtcttgtatcagagcaaactaggagatagagggggctgaaacaagggtttagaaaggcaaca 31849855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 5637807 - 5637721
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  || |||| |||| ||    |||||||||||||||||||||||  ||||||| |||||||    
T  5637807 atacttttactataaatatagaccttgtataagagcaaactttgagagagatagagggggctgaaacaagagtttagaaaggcaaca 5637721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 528 - 609
Target Start/End: Original strand, 16453305 - 16453386
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||| |||||||||||| | ||  ||||||| |||||  |||||||||||||||||||||||| |||| || |||||||    
T  16453305 tacttttgctataaatataggctttgtatcagagcaaaccgagagatagagggggctgaaacaagggtttaaaaaggcaaca 16453386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 509 - 578
Target Start/End: Original strand, 25357614 - 25357683
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagag 578  Q
    ||||||| |||| |||  ||||||||||||||||||||||||||  |||| |||||||||||||| ||||    
T  25357614 gttccaattttacgagggatacttttactataaatatagaccttgtatcaaagtaaaccttgagagagag 25357683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 36921833 - 36921750
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaacctt--gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||| |||||||||||||||  |||||||||||| ||  ||||||||||||| ||||||||||  |||||| |||||||    
T  36921833 atacttttacaataaatatagaccttgtatcagagtaaactttgagagatagaggggg-tgaaacaagggcttagaaaggcaaca 36921750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 5516833 - 5516793
Alignment:
Q  294 aaaatttgatggatggagaatattgttgctaaaaatataaa 334  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  5516833 aaaatttgatgaatggagaatattgttgctaaaaatataaa 5516793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 531 - 578
Target Start/End: Complemental strand, 40999281 - 40999234
Alignment:
Q  531 ttttactataaatatagaccttaaatcagagtaaaccttgagatagag 578  Q
    |||||||||||||||| |||||| |||||||||||||||||| |||||    
T  40999281 ttttactataaatataaaccttatatcagagtaaaccttgaggtagag 40999234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 531 - 609
Target Start/End: Original strand, 13543953 - 13544036
Alignment:
Q  531 ttttactataaatatagaccttaaatcaga-gtaaaccttgaga----tagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||| |||  |||||| |||||| ||||||    |||||||||||||||||||||| ||||||| |||||    
T  13543953 ttttactataaatatagatcttgtatcagatgtaaactttgagagagatagagggggctgaaacaaggatctagaatgacaaca 13544036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 400
Target Start/End: Complemental strand, 14647214 - 14647172
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccg 400  Q
    ||||||||||||||| |||||||| ||||||||||||||||||    
T  14647214 tgctgaaaatatattcatggacaacaaatatatttttgtaccg 14647172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 530 - 601
Target Start/End: Original strand, 12102088 - 12102161
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagataga-gggggctg-aaacaaggatttagaa 601  Q
    ||||||||||||||||||| |||  ||||||  ||||||||||||||| |||||||| |||||||| |||||||    
T  12102088 cttttactataaatatagatcttgtatcagataaaaccttgagatagaggggggctgaaaacaagggtttagaa 12102161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 38409194 - 38409282
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaacctt------gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  ||||||| |||| ||      |||||||||||||||||||||| | |||| || |||||||    
T  38409194 atacttttactataaatatagaccttgtatcagagcaaactttgagagggagatagagggggctgaaacaatggtttaaaaaggcaaca 38409282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 528 - 609
Target Start/End: Complemental strand, 8631760 - 8631675
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||| ||  |||| || |||| ||    |||||||||||||||||||||||| ||||||| |||||||    
T  8631760 tactttcactataaatatagactttgtatcaaagcaaactttgagagagatagagggggctgaaacaagggtttagaaaggcaaca 8631675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 530 - 609
Target Start/End: Original strand, 6132871 - 6132949
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| ||  ||| | |||||| |||||||||||| ||||| ||||||| || |||| |||||||    
T  6132871 cttttactataaatatagacattgtatcggtgtaaacattgagatagaggaggctg-aacaagggttcagaaaggcaaca 6132949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 570 - 609
Target Start/End: Complemental strand, 11006532 - 11006493
Alignment:
Q  570 gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  11006532 gagatagagggggctgaaacaagggtttagaaaggcaaca 11006493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 570 - 609
Target Start/End: Complemental strand, 11008861 - 11008822
Alignment:
Q  570 gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  11008861 gagatagagggggctgaaacaagggtttagaaaggcaaca 11008822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 18409681 - 18409603
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||  ||  ||||| ||||||  |||||||||| || ||||||||||| ||||||| |||||||    
T  18409681 cttttactataaatatagaatttgtatcagtgtaaacaatgagatagagagg-ctgaaacaagggtttagaaaggcaaca 18409603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 327
Target Start/End: Complemental strand, 29609983 - 29609948
Alignment:
Q  292 tcaaaatttgatggatggagaatattgttgctaaaa 327  Q
    ||||||||||||||||| ||||||||||||||||||    
T  29609983 tcaaaatttgatggatgaagaatattgttgctaaaa 29609948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 528 - 575
Target Start/End: Original strand, 36380370 - 36380417
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagata 575  Q
    |||||||||||||||||| ||| ||  |||||||||||||||||||||    
T  36380370 tacttttactataaatatggactttgtatcagagtaaaccttgagata 36380417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 407
Target Start/End: Complemental strand, 5516752 - 5516703
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaag 407  Q
    |||| ||||||||||||| || ||||||||||||||| || |||||||||    
T  5516752 tgctaaaaatatatttatagataataaatatatttttttatcgtatgaag 5516703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 528 - 601
Target Start/End: Original strand, 16455283 - 16455356
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||| |||| ||||||| | ||  ||||||| |||||  |||||| ||||||||||||||||| |||||||    
T  16455283 tacttttgctattaatataggctttgtatcagagcaaaccgagagataaagggggctgaaacaagggtttagaa 16455356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 578
Target Start/End: Complemental strand, 52043765 - 52043716
Alignment:
Q  530 cttttactataaatatagaccttaaatcaga-gtaaaccttgagatagag 578  Q
    |||||||||||||||||||||||  |||||| ||||||||||||| ||||    
T  52043765 cttttactataaatatagaccttgtatcagatgtaaaccttgagagagag 52043716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 527 - 563
Target Start/End: Complemental strand, 3824911 - 3824875
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagta 563  Q
    ||||||||||||||||||||||||||  |||||||||    
T  3824911 atacttttactataaatatagaccttgtatcagagta 3824875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 37412716 - 37412384
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  37412716 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 37412617  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||| || |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37412616 acaataaatataattatgtaacgtatgaagaatgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattcttccactgaagg 37412517  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 576  Q
    ||          |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||     
T  37412516 agaaaaaaaaacgtatcttcagtgtgttattcgttccaaatttatgagttatatttttactataaatatagaccttgaatcagagtaaacctggagatat 37412417  T
Q  577 agggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||| |||||||||||||||    
T  37412416 agggggctgaaacaagggtttagaatggcaaca 37412384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 21989853 - 21990183
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||       |||| ||||| |||  |||||||||||||||||    
T  21989853 tgttgtagtatgacccaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattgtgt--tgaaaatatatttatgg 21989950  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  21989951 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 21990050  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 575  Q
    ||           |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||    
T  21990051 aggaaaaaaaaacgtatcttctgtgtggtattcgttccaaatttatgagttataattttactataaatatagaccttgaatcagagtaaacctggagata 21990150  T
Q  576 gagggggctgaaacaaggatttagaatggcaaca 609  Q
    || ||||||||||||||| ||||||||| |||||    
T  21990151 ga-ggggctgaaacaagggtttagaatgacaaca 21990183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 7092768 - 7092431
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||| ||||||||||||    
T  7092768 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaagatatatttatgg 7092669  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  7092668 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 7092569  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 571  Q
    ||           |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||  ||||||| |||| ||    ||    
T  7092568 aggaaaaaaaattgtatcttcagtgtggtattcgttccaaatttatgagttatatgtttactataaatatagaccttgtatcagagcaaactttgagaga 7092469  T
Q  572 gatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||| |||||||||||||||||| ||||||||| |||||    
T  7092468 gatggagggggctgaaacaagggtttagaatgacaaca 7092431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 7095015 - 7094678
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  7095015 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 7094916  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| |||||||||    
T  7094915 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaaggaaatattatattttttatgcaaatattctttcactgaagg 7094816  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 571  Q
    ||           |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||  ||||||| |||| ||    ||    
T  7094815 aggaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatatgtttattataaatatagaccttgtatcagagcaaactttgagaga 7094716  T
Q  572 gatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||| |||||||||||||||    
T  7094715 gatagagggggctgaaacaagggtttagaatggcaaca 7094678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 11756925 - 11757262
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  11756925 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 11757024  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  11757025 acaataaatatatttttgtatcgtatgaagaactatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 11757124  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gag 572  Q
    ||          ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||    |||    
T  11757125 agaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 11757224  T
Q  573 atagagggggctgaaacaa-ggatttagaatggcaaca 609  Q
    ||||||||||||||||||| || ||||||||| |||||    
T  11757225 atagagggggctgaaacaaggggtttagaatgacaaca 11757262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 20299155 - 20299492
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  20299155 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttatttcaaatatattttgtgctgaaaatatatttatgg 20299254  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  20299255 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 20299354  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gag 572  Q
    ||          ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||  |||||  ||||| ||    |||    
T  20299355 agaaaaaaaaacgtatcttcagtgtggtatttgttccatatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 20299454  T
Q  573 atagagggggctgaaacaa-ggatttagaatggcaaca 609  Q
    ||||||||||||||||||| || ||||||||| |||||    
T  20299455 atagagggggctgaaacaaggggtttagaatgacaaca 20299492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 276 - 609
Target Start/End: Original strand, 3035413 - 3035754
Alignment:
Q  276 agtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttat 375  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||    
T  3035413 agtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttat 3035512  T
Q  376 ggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaa 475  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  3035513 ggacaataaatatatttttgtatcgtatgaagaatgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaa 3035612  T
Q  476 gg----agnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt-- 569  Q
    ||    ||         ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||      
T  3035613 ggagaaagaaaaaaaacgtatcttcagtatggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttga 3035712  T
Q  570 --gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
      |||||||||||||||||||||||| ||||||| |||||||    
T  3035713 gagagatagagggggctgaaacaagggtttagaaaggcaaca 3035754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 31156500 - 31156167
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |||| |||| |||||||||||||||||||||||    
T  31156500 tgttgtagtatgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaatatatttatgg 31156401  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  31156400 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 31156301  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 575  Q
    ||           | ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||  ||||  | |||| ||||||||    
T  31156300 agaaaaaaaaaacgaatcttcagtgtggtatttgttccaaatttatgagctatacttttactataaatatagagcttgtatcaaggcaaactttgagata 31156201  T
Q  576 gagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||| ||||||| |||||||    
T  31156200 gagggggctgaaacaagggtttagaaaggcaaca 31156167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 275 - 609
Target Start/End: Original strand, 18345234 - 18345574
Alignment:
Q  275 gagtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatattta 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||||| ||||||||||||    
T  18345234 gagtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctaaaaatatattta 18345333  T
Q  375 tggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactga 474  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||    
T  18345334 ttgacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaatggaatattatatttttgatgcaaatattctttcactga 18345433  T
Q  475 aggag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt--- 569  Q
    |||||           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  | ||| ||       
T  18345434 aggagaaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctgaactttgag 18345533  T
Q  570 -gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
     ||||||||||||| |||||||||| ||||||| |||||||    
T  18345534 ggagatagagggggttgaaacaagggtttagaaaggcaaca 18345574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 20625734 - 20626071
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  20625734 tgttctagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 20625833  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||    
T  20625834 acaataaatatatttttgtatcgtatgaagaacgatttgatacaaatatattttgaaagggaatattatatttttgatgcaaatattttttcactgaagg 20625933  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 571  Q
    ||           |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||  |||||| ||||| ||    ||    
T  20625934 agcaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatatgtttattataaatatagaccttctatcagactaaactttgagaga 20626033  T
Q  572 gatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  20626034 gatagagggggctgaaacaagggtttagaaaggcaaca 20626071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 20629625 - 20629962
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  20629625 tgttctagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 20629724  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||    
T  20629725 acaataaatatatttttgtatcgtatgaagaacgatttgatacaaatatattttgaaagggaatattatatttttgatgcaaatattttttcactgaagg 20629824  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 571  Q
    ||           |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||  |||||| ||||| ||    ||    
T  20629825 agcaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatatgtttattataaatatagaccttctatcagactaaactttgagaga 20629924  T
Q  572 gatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  20629925 gatagagggggctgaaacaagggtttagaaaggcaaca 20629962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 20642044 - 20642381
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  20642044 tgttctagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 20642143  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||    
T  20642144 acaataaatatatttttgtatcgtatgaagaacgatttgatacaaatatattttgaaagggaatattatatttttgatgcaaatattttttcactgaagg 20642243  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 571  Q
    ||           |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||  |||||| ||||| ||    ||    
T  20642244 agcaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatatgtttattataaatatagaccttctatcagactaaactttgagaga 20642343  T
Q  572 gatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  20642344 gatagagggggctgaaacaagggtttagaaaggcaaca 20642381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 42331593 - 42331255
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||        ||| ||||||||||||||||||||||||||||    
T  42331593 tgttgtagtatgacttaaaatttgatgaatgaagaatattgttgctaaaaatataaaagatttgttttaaatatattttgtgctgaaaatatatttatgg 42331494  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  42331493 acaataagtatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcattgaagg 42331394  T
Q  478 ag-------nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttg 570  Q
    ||                ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||| ||||| |||    
T  42331393 agaaagaaaaaaaaaaacgtatctttagtgtggtattcgttccaaatttatgagttatacttttactataaatatagactttgtatcagactaaactttg 42331294  T
Q  571 agatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  42331293 agatagagggggctgaaacaagggtttagaatgacaaca 42331255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 277 - 609
Target Start/End: Original strand, 38393682 - 38394019
Alignment:
Q  277 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatg 376  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||       |||| |||||||||||||||||| ||||||||    
T  38393682 gtgttgtagtatgattctaaatttgatggatggagaatattgttgctaaaaatatataagatttgtttcaaatatattttgtgctgaaaatttatttatg 38393781  T
Q  377 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 476  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  38393782 gacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatgttatatttttgatgcaaatattctttcactgaag 38393881  T
Q  477 gag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 571  Q
    | |          ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||    ||    
T  38393882 gtgaaaaaataacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagaga 38393981  T
Q  572 gatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  38393982 gatagagggggctgaaacaagggtttagaaaggcaaca 38394019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 278 - 601
Target Start/End: Complemental strand, 7472574 - 7472244
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  7472574 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 7472475  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  7472474 acaataaatatattattgtatcatatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcattgaagg 7472375  T
Q  478 ag---nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----g 570  Q
    ||            ||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||  |||||| ||||| ||    |    
T  7472374 agaaaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatatgtttactataaatatagaccttgtatcagactaaactttgagag 7472275  T
Q  571 agatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||||| |||||||    
T  7472274 agatagagggggctgaaacaagggtttagaa 7472244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 350 - 609
Target Start/End: Complemental strand, 13099993 - 13099732
Alignment:
Q  350 atattttgtgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatg 449  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  13099993 atattttgtgctgaaaatatatttatggacaataaatatattttcgtaccgtatgaagaacgatttgatacaaatatattttgaaagggaatattatatt 13099894  T
Q  450 tttgatgcaaatattcttccactgaaggag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatag 547  Q
    |||||||||||||||||| |||||||||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13099893 tttgatgcaaatattctttcactgaaggagaaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatag 13099794  T
Q  548 accttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  13099793 accttgaatcaaagtaaaccttgagatagagggggttgaaacaagggtttagaatggcaaca 13099732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 277 - 578
Target Start/End: Original strand, 1606170 - 1606472
Alignment:
Q  277 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatg 376  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||       |||| |||| ||||||||||||||||||||||    
T  1606170 gtgttgtagtatgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaatatatttatg 1606269  T
Q  377 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 476  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  1606270 gacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaag 1606369  T
Q  477 gag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 575  Q
    |||          | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||| || |||| ||||||||    
T  1606370 gagaaaaaaaaacgaatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaaagcaaactttgagata 1606469  T
Q  576 gag 578  Q
    |||    
T  1606470 gag 1606472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 7470621 - 7470278
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |       |||| ||||||||||||||||||||||||||||    
T  7470621 tgttgtagtatgactcaaaatttgatggatggagaatattattgctaaaaatataaaacatttgtttcaaatatattttgtgctgaaaatatatttatgg 7470522  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  7470521 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcattgaagg 7470422  T
Q  478 ag--------nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt 569  Q
    ||                 |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||  |||||| ||||| ||    
T  7470421 agaaaagaaaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatatgtttactataaatatagaccttgtatcagactaaacttt 7470322  T
Q  570 ----gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
        |||||||||||||||||||||||| ||||||| |||||||    
T  7470321 gagagagatagagggggctgaaacaagggtttagaaaggcaaca 7470278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 278 - 601
Target Start/End: Original strand, 28487249 - 28487578
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  28487249 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgcttcaaatatattttgtgctgaaaatatatttatgg 28487348  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  28487349 acaataaatataattttgtatcgtatgaagaatgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 28487448  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 571  Q
    ||           ||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||| |  |||||  ||||| ||    ||    
T  28487449 agaaaaaaaaaacgtatcttcagtgtggtatttgttctaaatttatgagttatacttttcctataaatatagaccatgtatcaggctaaactttgagaga 28487548  T
Q  572 gatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||||| |||||||    
T  28487549 gatagagggggctgaaacaagggtttagaa 28487578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 28485261 - 28485599
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |       |||| ||||||||||||||||||||||||||||    
T  28485261 tgttgtagtatgattcaaaatttgatggatgaagaatattgttgctaaaaatataaaatatttgtttcaaatatattttgtgctgaaaatatatttatgg 28485360  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  28485361 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcaccgaagg 28485460  T
Q  478 ag---nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----g 570  Q
    ||            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||    |    
T  28485461 aggaaaaaaaacacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagag 28485560  T
Q  571 agatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||| |||| |||||||||| ||||||| |||||||    
T  28485561 agatagaaggggttgaaacaagggtttagaaaggcaaca 28485599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 278 - 552
Target Start/End: Original strand, 38395986 - 38396262
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||||||     
T  38395986 tgttgtagtatgactccaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgt 38396085  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  38396086 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 38396185  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacctt 552  Q
    ||           |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  38396186 agaaaaaaaaaacgtatcttcggtgtggtatttgttccaaatttatgagttatacttttactataaatatagacctt 38396262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 7352246 - 7351908
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |||| |||| |||||||||||||||||||||||    
T  7352246 tgttgtagtatgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaatatatttatgg 7352147  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||| |    
T  7352146 acaataaatatatttttgtatcgcatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgaggcaaatattctttcactgaatg 7352047  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt------g 570  Q
    ||          |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||  |||||  ||||| ||      |    
T  7352046 agaaaaaaaaacgtatcttcagtgtgatatttgttccaaatttatgagttatacttttactataaatataaaccttgtatcaggctaaactttgagagag 7351947  T
Q  571 agatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  7351946 agatagagggggctgaaacaagggtttagaaaggcaaca 7351908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 7349867 - 7349529
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |||| |||| |||||||||||||||||||||||    
T  7349867 tgttgtagtatgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaatatatttatgg 7349768  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||| |    
T  7349767 acaataaatatatttttgtatcgcatgaagaacgatttgatgcaaatatattttgaaagagaatattatatttttgaggcaaatattctttcactgaatg 7349668  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt------g 570  Q
    ||          |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||      |    
T  7349667 agaaaaaaaaacgtatcttcagtgtgatatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 7349568  T
Q  571 agatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| || ||||||| |||||||    
T  7349567 agatagagggggctgaaacaggggtttagaaaggcaaca 7349529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 278 - 552
Target Start/End: Original strand, 1849665 - 1849941
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  1849665 tgttgtagtatgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 1849764  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||    
T  1849765 acaataaatatatttttgtatcgtatgaaggacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcagatattctttcactgaagg 1849864  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacctt 552  Q
    ||           | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1849865 agaaaaaaaaaacgaatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagacctt 1849941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 278 - 546
Target Start/End: Complemental strand, 21470883 - 21470614
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  21470883 tgttgtagtttgactccaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 21470784  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    ||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  21470783 acaataaatatatttttatatcgtatgaagaacgatttgatgcgaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 21470684  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatata 546  Q
    ||          |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21470683 agaaaaaaaaacgtatcttcggtgtggtatttgttccaaatttatgagttatacttttactataaatata 21470614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 278 - 478
Target Start/End: Original strand, 47865328 - 47865528
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  47865328 tgttgtagtatgactccaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 47865427  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  47865428 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 47865527  T
Q  478 a 478  Q
    |    
T  47865528 a 47865528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 286 - 609
Target Start/End: Original strand, 24258166 - 24258496
Alignment:
Q  286 tatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatggacaataaa 385  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||    
T  24258166 tatgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatggacaataaa 24258265  T
Q  386 tatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag------ 479  Q
    ||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||          
T  24258266 tatatttttgtacagtatgaaggacga-ttgatgcaaatatattttgaaagggaatattatatttttgatgtaaatattctttcactgaaggagaaaaaa 24258364  T
Q  480 -nnnnnnnnngtatcttca--gtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 576  Q
              |||||||||  ||||| |||||||||||||||||||||||||| |||  ||||||||||||   ||  |||||||||||| |||||||||    
T  24258365 ataaagaaatgtatcttcagtgtgtgatattcgttccaaatttatgagttata-tttctctataaatataggttttgtatcagagtaaacattgagatag 24258463  T
Q  577 agggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||| ||||||| |||||||    
T  24258464 agggggctgaaacaagggtttagaaaggcaaca 24258496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 278 - 598
Target Start/End: Original strand, 3676997 - 3677301
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||              
T  3676997 tgttgtagtatgactcaaaatttgatagatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaat---------- 3677086  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  3677087 ---------atatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 3677177  T
Q  478 ag----nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgaga 573  Q
    ||             |||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||| ||| ||||||||||||| | ||||    
T  3677178 agagaaaaaaaaaacgtatcttcagtgtgatattcgttccaaatttatgagttatgtttttactataaatatagatcttgaatcagagtaaacttggaga 3677277  T
Q  574 tagagggggctgaaacaaggattta 598  Q
    |||| ||||||||||||||| ||||    
T  3677278 taga-ggggctgaaacaagggttta 3677301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 358 - 578
Target Start/End: Complemental strand, 43254035 - 43253811
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgc 457  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43254035 tgctaaaaatatatttatggacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgc 43253936  T
Q  458 aaatattcttccactgaaggag----nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacctta 553  Q
    |||||||||| |||||||||||             |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  43253935 aaatattctttcactgaaggagaaaaaataagaaagtatcttcggtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttg 43253836  T
Q  554 aatcagagtaaaccttgagatagag 578  Q
     |||||  ||||| |||||| ||||    
T  43253835 tatcaggctaaactttgagagagag 43253811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 382 - 609
Target Start/End: Original strand, 20297163 - 20297395
Alignment:
Q  382 taaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag-n 480  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||      
T  20297163 taaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcaccgaaggagaa 20297262  T
Q  481 nnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gagatag 576  Q
            ||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| ||||||  |||||  ||||| ||    |||||||    
T  20297263 aaaaaaacgtatcttcagtgtggtatttgttccaaatttacgagttatacttttactaaaaatatggaccttgtatcaggctaaactttgagagagatag 20297362  T
Q  577 agggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||| |||||||||||||||    
T  20297363 agggggctgaaacaagggtttagaatggcaaca 20297395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 278 - 426
Target Start/End: Original strand, 443326 - 443474
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  443326 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 443425  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatat 426  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  443426 acaataaatatatttttgtaccgtctgaagaacaatttgatgcaaatat 443474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 489 - 609
Target Start/End: Original strand, 443508 - 443628
Alignment:
Q  489 gtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 588  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||| |||    
T  443508 gtatcttcagtgtggaattcgttccaaatttatgagttatacttttactataaatatagactttgaatcagagtaaaccttgagatagagggagctaaaa 443607  T
Q  589 caaggatttagaatggcaaca 609  Q
    ||| | |||||||||||||||    
T  443608 caatggtttagaatggcaaca 443628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 281 - 444
Target Start/End: Complemental strand, 40281989 - 40281824
Alignment:
Q  281 tgtagtatgactcaaaatttgatggatggagaata--ttgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgga 378  Q
    |||||||||||||||||||||||||||| |||| |  |||||||||||||||||||| |       |||| |||||||||| ||||||||||||||||||    
T  40281989 tgtagtatgactcaaaatttgatggatgaagaagaatttgttgctaaaaatataaaatatttgtttcaaatatattttgtgttgaaaatatatttatgga 40281890  T
Q  379 caataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 444  Q
     |||||||||||||||||||||||||||  |  ||||||| |  ||||||||| ||| ||||||||    
T  40281889 aaataaatatatttttgtaccgtatgaaagaatatttgatacggatatatttttaaaaggaatatt 40281824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 509 - 601
Target Start/End: Original strand, 7188476 - 7188568
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||| ||||||||  ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||||||    
T  7188476 gttccaattttatgagggatacttttactataaatatagactttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaa 7188568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 27306567 - 27306485
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  27306567 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 27306485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 44515 - 44597
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  44515 atacttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 44597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 509 - 588
Target Start/End: Complemental strand, 20091897 - 20091818
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 588  Q
    ||||||| ||||||||  ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  20091897 gttccaattttatgagggatacttttactataaatatagactttttatcagagtaaaccttgagatagagggggctgaaa 20091818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 527 - 598
Target Start/End: Original strand, 22392424 - 22392495
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggattta 598  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||||    
T  22392424 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggttta 22392495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 515 - 609
Target Start/End: Original strand, 11355197 - 11355291
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||  || |||||||||||||||||| | ||  ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  11355197 aatttatgagggattcttttactataaatataggctttgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 11355291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 18567564 - 18567646
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||| |||  |||||||||||| |||||||||| ||||||||||||||| ||||||| |||||||    
T  18567564 atacttttactataaatatagatcttgtatcagagtaaactttgagatagaaggggctgaaacaagggtttagaaaggcaaca 18567646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 515 - 609
Target Start/End: Complemental strand, 20137459 - 20137365
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||  || |||||||||||||||| | | ||  ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  20137459 aatttatgagggattcttttactataaatattggctttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 20137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 31435385 - 31435303
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||| |||  |||||||||||| |||||||||| ||||||||||||||| ||||||| |||||||    
T  31435385 atacttttactataaatatagatcttgtatcagagtaaactttgagatagaaggggctgaaacaagggtttagaaaggcaaca 31435303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 1049631 - 1049551
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  || |||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  1049631 acttttactataaatatagaccttgtattagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 1049551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 22251878 - 22251798
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||| ||||| ||||||||||||| |||||||||||| ||||||||||||  ||||||| |||||||    
T  22251878 acttttactataaatataaaccttgaatcagagtaaactttgagatagaggaggctgaaacaagagtttagaaaggcaaca 22251798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 517 - 609
Target Start/End: Complemental strand, 22828981 - 22828889
Alignment:
Q  517 tttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||  ||||||||||||||||||||| | ||  ||| ||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  22828981 tttatgagggatacttttactataaatataggctttgtatccgagtaaaccttgagatagagggggctgaaacaagagtttagaaaggcaaca 22828889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 515 - 609
Target Start/End: Complemental strand, 4296286 - 4296191
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaa-atcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||  || |||||||||||||||||||| ||   ||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  4296286 aatttatgagggatgcttttactataaatatagacatttgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaatgacaaca 4296191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 530 - 609
Target Start/End: Original strand, 21679981 - 21680060
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| ||  || || ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  21679981 cttttactataaatatagacattgtattagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 21680060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 527 - 593
Target Start/End: Original strand, 35580 - 35646
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaagg 593  Q
    ||||||||||||||||||||||||||  ||||||| |||| ||||||||||||||||||||||||||    
T  35580 atacttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagg 35646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 20297108 - 20297157
Alignment:
Q  288 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaga 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20297108 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaga 20297157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 530 - 609
Target Start/End: Original strand, 21678020 - 21678099
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||  ||  ||||  ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  21678020 cttttactataaatatagatattgtatcaatgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 21678099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 530 - 609
Target Start/End: Original strand, 44724533 - 44724612
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| ||  ||||| |||||||| |||||| ||||||||||||||||| ||||||| |||||||    
T  44724533 cttttactataaatatagacattgtatcagtgtaaacctggagatatagggggctgaaacaagggtttagaaaggcaaca 44724612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 358 - 444
Target Start/End: Complemental strand, 12310528 - 12310442
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 444  Q
    |||||||| |||| ||| ||||| | |||||||||||||||||||||||| | ||||||||| ||||||||||| ||| ||||||||    
T  12310528 tgctgaaattatacttaaggacagttaatatatttttgtaccgtatgaaggaagatttgatgtaaatatatttttaaaaggaatatt 12310442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 26804524 - 26804602
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||      |||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  26804524 atacttttactataaatatagaccttgt----gagtaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 26804602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 510 - 601
Target Start/End: Complemental strand, 30906405 - 30906313
Alignment:
Q  510 ttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctg-aaacaaggatttagaa 601  Q
    |||||| |||||||   |||||||| |||||||||||||||||  || |||||||| ||||||||||||||||||| ||||||| ||||||||    
T  30906405 ttccaattttatgatggatacttttgctataaatatagaccttgtataagagtaaatcttgagatagagggggctgaaaacaagaatttagaa 30906313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 530 - 609
Target Start/End: Original strand, 42223110 - 42223190
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagataga-gggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||| | ||  ||||||||||||||||||||||| | ||| |||||||||| |||||||||||||||    
T  42223110 cttttactataaatataggctttgtatcagagtaaaccttgagatagatgtgggatgaaacaagggtttagaatggcaaca 42223190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 531 - 601
Target Start/End: Original strand, 24465503 - 24465574
Alignment:
Q  531 ttttactataaatatagaccttaaatcaga-gtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||| |||||||| ||  |||||| ||||||||||||||||||||||||||||||||| |||||||    
T  24465503 ttttactatagatatagactttgtatcagatgtaaaccttgagatagagggggctgaaacaagggtttagaa 24465574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 515 - 609
Target Start/End: Original strand, 9680753 - 9680852
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcaga-gtaaaccttgaga----tagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||  || |||||||||||||||||||||||  |||||| |||||||||||||    ||||||||| |||||||||| ||||||| |||||||    
T  9680753 aatttatgagggatgcttttactataaatatagaccttgtatcagatgtaaaccttgagagagatagagggggttgaaacaagggtttagaagggcaaca 9680852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 530 - 600
Target Start/End: Complemental strand, 39146322 - 39146252
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttaga 600  Q
    ||||||||||||||||||||  |  ||||| |||||||||||||| |||||||||||||||||| ||||||    
T  39146322 cttttactataaatatagacactgtatcagtgtaaaccttgagatggagggggctgaaacaagggtttaga 39146252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 43254069 - 43254023
Alignment:
Q  286 tatgactcaaaatttgatggatggagaatattgttgctaaaaatata 332  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  43254069 tatgtctcaaaatttgatggatggagaatattgttgctaaaaatata 43254023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 10690684 - 10690732
Alignment:
Q  288 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaag 336  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  10690684 tgactcaaaatttgatggagggagaagattgttgctaaaaatataaaag 10690732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 529 - 601
Target Start/End: Original strand, 25542484 - 25542555
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||||||  ||||||| |||| |||||||||| ||||||||||||| | |||||||    
T  25542484 acttttactataaatatagaccttgtatcagagcaaactttgagataga-ggggctgaaacaaaggtttagaa 25542555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 40837078 - 40836998
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  ||||||| |||  | ||||| ||||||||||||| |||| ||||||| |||||||    
T  40837078 acttttactataaatatagaccttgtatcagagcaaatttggagattgagggggctgaaagaagggtttagaaaggcaaca 40836998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 532 - 601
Target Start/End: Complemental strand, 24817682 - 24817613
Alignment:
Q  532 tttactataaatatagaccttaaatcaga-gtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||| ||||||||||||||||  |||||| ||||||||||||||||| ||||||||||||||| |||||||    
T  24817682 tttaatataaatatagaccttgtatcagatgtaaaccttgagataga-ggggctgaaacaagggtttagaa 24817613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 528 - 609
Target Start/End: Original strand, 48457601 - 48457686
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||||||  |||||  ||||| ||    |||||||||||||||||||||||| ||||||| |||||||    
T  48457601 tactttcactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaacaagggtttagaaaggcaaca 48457686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 530 - 601
Target Start/End: Original strand, 24748548 - 24748619
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||| ||||||||||||| ||  ||||| |||||| ||||  |||||||||||||||||||| |||||||    
T  24748548 cttttattataaatatagacattgtatcagtgtaaactttgacttagagggggctgaaacaagggtttagaa 24748619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 530 - 609
Target Start/End: Original strand, 25276095 - 25276174
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||  | ||  ||||||| |||| ||||||||||||||||| ||||||  |||||||| |||||||    
T  25276095 cttttactataaatatatgctttgtatcagagcaaactttgagatagagggggctaaaacaataatttagaaaggcaaca 25276174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 531 - 609
Target Start/End: Original strand, 9679009 - 9679092
Alignment:
Q  531 ttttactataaatatagaccttaaatcaga-gtaaaccttgaga----tagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||| |||  |||||| |||||| ||||||    |||||||||||||||||||||| ||||||| |||||    
T  9679009 ttttactataaatatagatcttgtatcagatgtaaactttgagagagatagagggggctgaaacaaggatctagaatgacaaca 9679092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 444
Target Start/End: Original strand, 10690773 - 10690845
Alignment:
Q  372 ttatggacaataaatatatttttgtaccgtatga-agaacgatttgatgcaaatatattttgaaagggaatatt 444  Q
    ||||| |||||||||||||||||||||| | ||| ||||  |||||||||||||||||||| ||| ||||||||    
T  10690773 ttatgtacaataaatatatttttgtaccatgtgacagaat-atttgatgcaaatatatttttaaaaggaatatt 10690845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 527 - 601
Target Start/End: Original strand, 3878522 - 3878602
Alignment:
Q  527 atacttttactataaat----atagaccttaaatcagagtaaaccttgaga--tagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||    |||||||||  ||||||| |||| ||||||  |||||||||||||||||||| |||||||    
T  3878522 atacttttactataaattaatatagaccttgtatcagagcaaactttgagagatagagggggctgaaacaagggtttagaa 3878602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 527 - 598
Target Start/End: Original strand, 6332177 - 6332248
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggct-gaaacaaggattta 598  Q
    |||||||||||||||||||| | |||  |||||||| |||||||||| |||||||||| ||||||||| ||||    
T  6332177 atacttttactataaatataaaacttgtatcagagt-aaccttgagagagagggggctggaaacaagggttta 6332248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 570 - 609
Target Start/End: Original strand, 1849975 - 1850014
Alignment:
Q  570 gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  1849975 gagatagagggggctgaaacaagggtttagaaaggcaaca 1850014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 405
Target Start/End: Complemental strand, 12485023 - 12484976
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatga 405  Q
    ||||||||||||||||||||| |  ||||||||||||||| |||||||    
T  12485023 tgctgaaaatatatttatggatagcaaatatatttttgtatcgtatga 12484976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 405
Target Start/End: Complemental strand, 12506454 - 12506407
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatga 405  Q
    ||||||||||||||||||||| |  ||||||||||||||| |||||||    
T  12506454 tgctgaaaatatatttatggatagcaaatatatttttgtatcgtatga 12506407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 555 - 601
Target Start/End: Complemental strand, 21592453 - 21592407
Alignment:
Q  555 atcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||| |||||| |||||||||||||||||||||||| | |||||||    
T  21592453 atcagtgtaaactttgagatagagggggctgaaacaaaggtttagaa 21592407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 221; Significance: 1e-121; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 275 - 609
Target Start/End: Original strand, 26097418 - 26097756
Alignment:
Q  275 gagtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatattta 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |       |||| ||||||||| |||||||||||||||    
T  26097418 gagtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaaatttgtttcaaatatattttgtactgaaaatatattta 26097517  T
Q  375 tggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttga--aagggaatattatatgtttgatgcaaatattcttccact 472  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||| |||||| |||||||||||||||||| ||||    
T  26097518 tggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaagaaggaaatgttatatttttgatgcaaatattctttcact 26097617  T
Q  473 gaaggag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttg 570  Q
    |||||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  26097618 gaaggaggaaaaaaaaatgtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttgaatcagagtaaactttg 26097717  T
Q  571 agatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||| || | |||||||||||||||    
T  26097718 agatagagggggctgaaataaaggtttagaatggcaaca 26097756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 26098841 - 26098507
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  26098841 tgttgtagtatgactcaaaatttgatggatggagaatattattgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 26098742  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||| || ||||||    
T  26098741 acaataaatatatttttgtaccgtataaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatacaaaaattctttcattgaagg 26098642  T
Q  478 ag---nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagat 574  Q
    ||            ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  26098641 agaaataaaaaaacgtatcttcaatgtggtattcgttccaattttatgagttatacttttactataaatatagaccttgaatcagagtaaacctggagat 26098542  T
Q  575 agagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||| |||| |||||||||||||||    
T  26098541 agagggggctgaaataagggtttagaatggcaaca 26098507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 18468698 - 18469034
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  18468698 tgttgtagtatgactcaaaatttgatggatggagaatatttttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 18468797  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  18468798 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 18468897  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gag 572  Q
    ||          ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||   ||||| ||    |||    
T  18468898 agaaaataaaaagtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcatgataaactttgagagag 18468997  T
Q  573 atagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  18468998 atagagggggctgaaacaagggtttagaaaggcaaca 18469034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 280 - 609
Target Start/End: Complemental strand, 18511800 - 18511468
Alignment:
Q  280 ttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatggac 379  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||       | || ||||||||||||||||||||||||||||||    
T  18511800 ttgtagtatgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcgaatatattttgtgctgaaaatatatttatggac 18511701  T
Q  380 aataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||    
T  18511700 aataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaaggaaatattatatttttgatgcaaatattctttcactgaaggag 18511601  T
Q  480 -nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt--gagatag 576  Q
              ||||||| |||||||||||||||||||||||||||||||||  |||| ||||||||||||||||  |||||| ||||| ||  |||||||    
T  18511600 aaaaaaaaacgtatctttagtgtggtattcgttccaaatttatgagttatatgtttaatataaatatagaccttgtatcagactaaactttgagagatag 18511501  T
Q  577 agggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||| ||||||||| |||||    
T  18511500 agggggctgaaacaagggtttagaatgacaaca 18511468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 281 - 609
Target Start/End: Complemental strand, 18509904 - 18509574
Alignment:
Q  281 tgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatggaca 380  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       | || |||||||||||||||||||||||||||||||    
T  18509904 tgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttatttcgaatatattttgtgctgaaaatatatttatggaca 18509805  T
Q  381 ataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag- 479  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||     
T  18509804 ataaatatatttttgtaccgtatgaagaatgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaaggaga 18509705  T
Q  480 nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagag- 578  Q
             |||||||||||||||||||| | ||||||||||||||||||  |||||||||||||||||||||  |||||| ||||| |||||| | ||     
T  18509704 aaaaaaaacgtatcttcagtgtggtattcatcccaaatttatgagttatatgtttactataaatatagaccttgtatcagactaaactttgagagataga 18509605  T
Q  579 ggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||| ||||||||| |||||    
T  18509604 ggggctgaaacaagggtttagaatgacaaca 18509574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 27912219 - 27912559
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  27912219 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 27912318  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  27912319 acaataaatatatttttgtatcgtatgaaaaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 27912418  T
Q  478 ag---nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----- 569  Q
    ||            |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||         
T  27912419 agaaaaaaaaaaacgtatcttcagtgtgatatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagag 27912518  T
Q  570 -gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
     ||||||||||| |||||||||||| ||||||| |||||||    
T  27912519 agagatagagggtgctgaaacaagggtttagaaaggcaaca 27912559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 278 - 552
Target Start/End: Original strand, 25803707 - 25803982
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  25803707 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 25803806  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  25803807 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 25803906  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacctt 552  Q
    ||          |||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25803907 agaaaaaaaaacgtatcttcagtgtaatatttgttccaaatttatgagttatacttttactataaatatagacctt 25803982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 278 - 578
Target Start/End: Original strand, 27910135 - 27910437
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  27910135 tgttgtagtatgactcaaaatttgatggatggagaatattattgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 27910234  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  27910235 acaataaatatatttttgtattgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 27910334  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 575  Q
    ||           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| |||||| |    
T  27910335 agaaaaaaaaaaagtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggttaaactttgagaga 27910434  T
Q  576 gag 578  Q
    |||    
T  27910435 gag 27910437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 278 - 574
Target Start/End: Complemental strand, 3373630 - 3373332
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||| |||| |||||||||||||||||||||||    
T  3373630 tgttgtagtatgactcagaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaatatatttatgg 3373531  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||    
T  3373530 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattttttcactgaagg 3373431  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagat 574  Q
    ||           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||| || |||| |||||||    
T  3373430 agaaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaaagcaaactttgagat 3373332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 298 - 609
Target Start/End: Original strand, 10586549 - 10586865
Alignment:
Q  298 tttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatggacaataaatatatttttgta 397  Q
    |||||||||||| |||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10586549 tttgatggatggggaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatggacaataaatatatttttgta 10586648  T
Q  398 ccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag--nnnnnnnnngtatctt 495  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||           |||||||    
T  10586649 tcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaaggagaaaaaaaaaacgtatctt 10586748  T
Q  496 cagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagataga---gggggctgaaacaag 592  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| |||||| |||    ||||||||||||||    
T  10586749 cagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagatagaggggctgaaacaag 10586848  T
Q  593 gatttagaatggcaaca 609  Q
    | |||||||||||||||    
T  10586849 ggtttagaatggcaaca 10586865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 278 - 593
Target Start/End: Original strand, 18596326 - 18596654
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||| |||||||||||||||||    
T  18596326 tgttgtactatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgttgaaaatatatttatgg 18596425  T
Q  378 acaataaatata-----------tttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattct 466  Q
    ||||||||||||           |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||    
T  18596426 acaataaatataccataaatatatttttgtaccgtataaagaacgatttgatgcaaatatattttgaaagagaatattatatttttgatacaaatattct 18596525  T
Q  467 tccactgaaggagnnnnnnnnn--gtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaa 564  Q
      |||||||||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18596526 atcactgaaggagaaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttgaatcagagtaa 18596625  T
Q  565 accttgagatagagggggctgaaacaagg 593  Q
    |||||| ||||||||||||||||||||||    
T  18596626 accttgggatagagggggctgaaacaagg 18596654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 277 - 578
Target Start/End: Original strand, 15551924 - 15552227
Alignment:
Q  277 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatg 376  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||| |||||||||| |||||||||||    
T  15551924 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaagatatatttatg 15552023  T
Q  377 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 476  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||| ||||||||    
T  15552024 gacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatatgacatttttgatgcaaatattctttcactgaag 15552123  T
Q  477 gag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagat 574  Q
    |||           |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||||||     
T  15552124 gagaaaaaaaaaacgtatcttcagcgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagag 15552223  T
Q  575 agag 578  Q
    ||||    
T  15552224 agag 15552227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 358 - 609
Target Start/End: Original strand, 18466453 - 18466707
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgc 457  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18466453 tgctaaaaatatatttatggacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgc 18466552  T
Q  458 aaatattcttccactgaaggagnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatc 557  Q
    |||||||||| |||| ||||||         ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||  |||    
T  18466553 aaatattctttcactaaaggag-aaaaaaaagtatcttcagtgtggtatttgttccaaatttatgagttatatttttactataaatatagaccttgtatc 18466651  T
Q  558 agagtaaacctt----gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||  ||||| ||    |||||||||||||||||||||||| ||||||| |||||||    
T  18466652 aggctaaactttgagagagatagagggggctgaaacaagggtttagaaaggcaaca 18466707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 278 - 461
Target Start/End: Original strand, 21288529 - 21288713
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||        ||| ||||||||||||||||||||||||||||    
T  21288529 tgttgtagtataactcaaaatttgatggatggagaatattgttgctaaaaataaaaaagatttgtttaaaatatattttgtgctgaaaatatatttatgg 21288628  T
Q  378 acaataaatatatttttg-taccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaat 461  Q
    |||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  21288629 acaataaatatattttcggtaccgtatgaagaacgattttatgcaaatatattttgaaagggaatattatatttttgatgcaaat 21288713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 285 - 430
Target Start/End: Complemental strand, 17415893 - 17415748
Alignment:
Q  285 gtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatggacaataa 384  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||       |||| ||||||| |||||||||||||||||||||||||||    
T  17415893 gtatgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttttgctgaaaatatatttatggacaataa 17415794  T
Q  385 atatatttttgtaccgtatgaagaacgatttgatgcaaatatattt 430  Q
    |||||||||||||| |||||||| |  |||||||||||||||||||    
T  17415793 atatatttttgtactgtatgaaggaaaatttgatgcaaatatattt 17415748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 411 - 609
Target Start/End: Original strand, 40221340 - 40221545
Alignment:
Q  411 gatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggagnnnnnnnnn---------gtatcttcagtgt 501  Q
    |||||| | |||||||||||||||| |||||||||||| |||||||||||||||||| ||||| |||||                  |||||||||||||    
T  40221340 gatttgtttcaaatatattttgaaaaggaatattatatttttgatgcaaatattctttcactgcaggagaaggaaaaaacaaaaaacgtatcttcagtgt 40221439  T
Q  502 ggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    | ||| ||||| ||||||||||||||  |||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||| |||||||    
T  40221440 gatatccgttctaaatttatgagtta--cttttactataaatatagacattgactcagagtaaaccttgagatagagggggctgaaacaagggtttagaa 40221537  T
Q  602 tggcaaca 609  Q
    ||||||||    
T  40221538 tggcaaca 40221545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 489 - 602
Target Start/End: Complemental strand, 41586082 - 41585969
Alignment:
Q  489 gtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 588  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||   ||  ||||||||||||||||||||| ||||||||||||    
T  41586082 gtatcttcagtctggtattcgttccaaatctatgagttatacttttactataaatataggttttgtatcagagtaaaccttgagataaagggggctgaaa 41585983  T
Q  589 caaggatttagaat 602  Q
    ||||| ||||||||    
T  41585982 caagggtttagaat 41585969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 358 - 573
Target Start/End: Original strand, 15143262 - 15143475
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgc 457  Q
    |||| ||||||||||||||||||||||||| ||||||||||| ||||||| | ||||||||||||||||||||||||||||||||       ||||||||    
T  15143262 tgctaaaaatatatttatggacaataaatacatttttgtaccatatgaaggaagatttgatgcaaatatattttgaaagggaata-------tttgatgc 15143354  T
Q  458 aaatattcttccactgaa-----ggagnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacctt 552  Q
    |||||||||| |||||||     |||          |||||||||| ||| ||| |||| ||||||||||||||||| |||  |||||||||||||||||    
T  15143355 aaatattctttcactgaagaaggggaaaaaagaaacgtatcttcagcgtgatatccgttacaaatttatgagttata-tttctctataaatatagacctt 15143453  T
Q  553 aaatcaga-gtaaaccttgaga 573  Q
      |||||| |||||||||||||    
T  15143454 gtatcagatgtaaaccttgaga 15143475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 527 - 603
Target Start/End: Complemental strand, 36402666 - 36402590
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatg 603  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||    
T  36402666 atacttttactataaatatagaccttatatcagagtaaacgttgagatagagggggctgaaacaagggtttagaatg 36402590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 491 - 601
Target Start/End: Complemental strand, 6661555 - 6661446
Alignment:
Q  491 atcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaaca 590  Q
    |||||||||||  ||| |||| ||||||||||||||||| ||| ||||||||||||||||||  |||||||||||||||||||||||| ||| |||||||    
T  6661555 atcttcagtgttatatccgtttcaaatttatgagttata-tttcactataaatatagaccttgtatcagagtaaaccttgagatagagagggttgaaaca 6661457  T
Q  591 aggatttagaa 601  Q
    ||| |||||||    
T  6661456 agggtttagaa 6661446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 278 - 382
Target Start/End: Complemental strand, 6662033 - 6661929
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||| |       |||| |||||||||| |||||||||||||||||    
T  6662033 tgttgtagtatgacttaaaacttgatggatgaagaatattgttgctaaaaatataaaatatttgtttcaaatatattttgtgttgaaaatatatttatgg 6661934  T
Q  378 acaat 382  Q
    |||||    
T  6661933 acaat 6661929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 527 - 601
Target Start/End: Complemental strand, 2818674 - 2818600
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||    
T  2818674 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaa 2818600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 12556261 - 12556179
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||| |||| ||||||||| |||||    
T  12556261 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaataagggtttagaatgacaaca 12556179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 20507800 - 20507718
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||| |||  |||||||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  20507800 atacttttactataaatatagatcttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 20507718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 18466411 - 18466465
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatata 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18466411 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatata 18466465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 527 - 601
Target Start/End: Complemental strand, 25921811 - 25921737
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| |||||||    
T  25921811 atacttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 25921737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 533 - 609
Target Start/End: Complemental strand, 10474655 - 10474579
Alignment:
Q  533 ttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||| ||  ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  10474655 ttactataaatatagacattgtatcagtgtaaaccttgaaatagagggggctgaaacaaggatttagaaaggcaaca 10474579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 31542678 - 31542758
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  |||| || |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  31542678 acttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 31542758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 530 - 601
Target Start/End: Original strand, 36208524 - 36208596
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctg-aaacaaggatttagaa 601  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||| |||||||    
T  36208524 cttttactataaatatagaccttgtatcagagtaaaccttgagatagagggggctgaaaacaagggtttagaa 36208596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 530 - 601
Target Start/End: Original strand, 17072827 - 17072898
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| |||||||    
T  17072827 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 17072898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 530 - 601
Target Start/End: Original strand, 25904047 - 25904118
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| |||||||    
T  25904047 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 25904118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 530 - 601
Target Start/End: Complemental strand, 34531001 - 34530930
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||  |||||||    
T  34531001 cttttactgtaaatatagactttgaatcagagtaaaccttgagatagagggggctgaaacaagtgtttagaa 34530930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 15143220 - 15143274
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatata 332  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15143220 tgttatagtatgactcaaaatttgatggatggagaatattgttgctaaaaatata 15143274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 537 - 609
Target Start/End: Original strand, 21288715 - 21288787
Alignment:
Q  537 tataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| ||||| |||| |||||||| ||||||    
T  21288715 tataaatatagaccttgaattagagtaaaccttgagatagagggggttgaaataagggtttagaatagcaaca 21288787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 31545023 - 31545103
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  |||| || |||| |||||||| ||||||||||||||||| ||||||| |||||||    
T  31545023 acttttactataaatatagaccttgtatcaaagcaaactttgagataaagggggctgaaacaagggtttagaaaggcaaca 31545103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 530 - 601
Target Start/End: Original strand, 24126800 - 24126871
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||| ||||||||||||||  |||||||    
T  24126800 cttttactataaatatagacattatatcagtgtaaaccttgagatagatggggctgaaacaagagtttagaa 24126871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 278 - 337
Target Start/End: Original strand, 40221282 - 40221341
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaga 337  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  40221282 tgttgtagtatgactcaaaatttaattgatgaagaatattgttgctaaaaatataaaaga 40221341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 4236570 - 4236652
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  ||||||| |||| | |||||| ||||||||||||||||  ||||||| |||||||    
T  4236570 atacttttactataaatatagaccttgtatcagagcaaacttggagataaagggggctgaaacaagagtttagaaaggcaaca 4236652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 601
Target Start/End: Original strand, 21947968 - 21948041
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||||||||  |||||||||||  |||||||||| ||||||||||||||| |||||||    
T  21947968 atacttttactataaatatagaccttgtatcagagtaaattttgagataga-ggggctgaaacaagggtttagaa 21948041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 515 - 609
Target Start/End: Complemental strand, 31472963 - 31472869
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||  || |||||||||||||||| ||| ||  || || |||||||||||||||||||||||| |||||||| ||||||| |||||||    
T  31472963 aatttatgagggatgcttttactataaatatggacattgtattagtgtaaaccttgagatagagggggctaaaacaagggtttagaaaggcaaca 31472869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 528 - 609
Target Start/End: Complemental strand, 10529436 - 10529355
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||||||  ||||||| |||| ||||||||||| ||| |||||||||| ||||||| |||||||    
T  10529436 tactttcactataaatatagaccttgtatcagagcaaactttgagatagagtgggttgaaacaagggtttagaaaggcaaca 10529355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 38882048 - 38882129
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagataga-gggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  ||||||| |||| | |||||||| |||||||||||||||| ||||||| |||||||    
T  38882048 acttttactataaatatagaccttgtatcagagcaaacttggagatagaggggggctgaaacaagggtttagaaaggcaaca 38882129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 528 - 609
Target Start/End: Original strand, 39854426 - 39854506
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||||||  ||||||| |||| |||||||||| ||||||||||||||| ||||||| |||||||    
T  39854426 tactttcactataaatatagaccttgtatcagagcaaactttgagataga-ggggctgaaacaagggtttagaaaggcaaca 39854506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 31179707 - 31179627
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||| ||  |||| || |||| ||||||||||||| |||||||||||| ||||||| |||||||    
T  31179707 acttttactataaatatagacattgtatcaaagcaaactttgagatagagggagctgaaacaagggtttagaaaggcaaca 31179627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 528 - 608
Target Start/End: Complemental strand, 37706117 - 37706037
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaac 608  Q
    ||||||| |||||||||||||| ||  ||||| |||||||||||||||||||||||||||| || | ||||||| ||||||    
T  37706117 tacttttgctataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaataaaggtttagaaaggcaac 37706037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 530 - 609
Target Start/End: Original strand, 2174863 - 2174942
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||| || ||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  2174863 cttttactataaatacaggccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 2174942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 510 - 609
Target Start/End: Original strand, 6756419 - 6756517
Alignment:
Q  510 ttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||| | ||||||||||||||||| |||||||| |||  |||| | ||||| ||||||||||||| |||||||||| | ||||||| |||||||    
T  6756419 ttccaaattt-taagttatacttttactattaatatagatcttgtatcatattaaactttgagatagagggagctgaaacaatggtttagaaaggcaaca 6756517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 16776098 - 16776181
Alignment:
Q  527 atacttttactataaa-tatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||| ||||||||||  ||| ||| |||| |||||||||||||||||||||||||| |||| || |||||||    
T  16776098 atacttttactataaaatatagaccttgtatctgagcaaactttgagatagagggggctgaaacaagggtttacaaaggcaaca 16776181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 530 - 609
Target Start/End: Original strand, 20042994 - 20043073
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||| | ||  |||| || ||||||||||||||||||||||||||||||  ||||||| |||||||    
T  20042994 cttttactataaatataggctttgtatcatagcaaaccttgagatagagggggctgaaacaagtgtttagaaaggcaaca 20043073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 530 - 599
Target Start/End: Original strand, 20044954 - 20045023
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttag 599  Q
    |||||||||||||||||| | ||  ||||||| ||||||||||| ||||||||||||||||||| |||||    
T  20044954 cttttactataaatataggctttgtatcagagcaaaccttgagacagagggggctgaaacaagggtttag 20045023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 528 - 609
Target Start/End: Original strand, 4409999 - 4410084
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgaga----tagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||||||  ||||||| |||| ||||||    |||||||||||||||||||| ||||||| |||||||    
T  4409999 tactttcactataaatatagaccttgtatcagagcaaactttgagagagatagagggggctgaaacaagggtttagaaaggcaaca 4410084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 530 - 609
Target Start/End: Original strand, 695833 - 695912
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||| ||||||||| ||  || || ||||||||||||||| |||||| |||||||||| ||||||| |||||||    
T  695833 cttttactatgaatatagacattgtatgagtgtaaaccttgagataaagggggatgaaacaagggtttagaaaggcaaca 695912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 1189949 - 1189865
Alignment:
Q  530 cttttactataaatatagaccttaaatcaga-gtaaaccttgaga----tagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||||  |||||| |||||||||||||    |||||||||||||||||||  ||||||| |||||||    
T  1189949 cttttactataaatatagaccttgtatcagatgtaaaccttgagagagatagagggggctgaaacaagagtttagaaaggcaaca 1189865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 509 - 588
Target Start/End: Original strand, 42770697 - 42770775
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 588  Q
    ||||||| ||||||||  |||||||||||||||||||| || ||  ||| ||||||||||||||||||||||| ||||||    
T  42770697 gttccaattttatgagggatacttttactataaatataaactttgtatc-gagtaaaccttgagatagaggggactgaaa 42770775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 529 - 591
Target Start/End: Complemental strand, 31466314 - 31466252
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaa 591  Q
    ||||||||||||||||||||||||  |||||| ||||| |||||||| | |||||||||||||    
T  31466314 acttttactataaatatagaccttgtatcagactaaactttgagataaaaggggctgaaacaa 31466252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 431
Target Start/End: Original strand, 32520241 - 32520316
Alignment:
Q  358 tgctgaaaatatatttatggacaataaa--tatatttttgtaccgtatgaagaacgatttgatgcaaatatatttt 431  Q
    ||||||||||||||||||| | | ||||  ||||||||||||||||| ||||||  |||||||||||| |||||||    
T  32520241 tgctgaaaatatatttatgtagagtaaaaatatatttttgtaccgtacgaagaaaaatttgatgcaaacatatttt 32520316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 39398327 - 39398249
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||| || ||  | | | ||||||||||||||||||||| ||||||||||| ||||||| |||||||    
T  39398327 cttttactataaatataaacattgtaccggtgtaaaccttgagatagagggg-ctgaaacaagggtttagaaaggcaaca 39398249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 530 - 580
Target Start/End: Original strand, 2723911 - 2723961
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagaggg 580  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||||||||    
T  2723911 cttttactataaatatagacattgtatcagtgtaaaccttgagatagaggg 2723961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 528 - 609
Target Start/End: Complemental strand, 17818826 - 17818746
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||  ||||||||||||| ||  ||||| ||||||||||||| ||| ||||||||||||||  ||||||| |||||||    
T  17818826 tacttttgttataaatatagacattgtatcagtgtaaaccttgagaaaga-ggggctgaaacaagagtttagaaaggcaaca 17818746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 527 - 578
Target Start/End: Complemental strand, 2144930 - 2144878
Alignment:
Q  527 atacttttactataaatatagaccttaaatcaga-gtaaaccttgagatagag 578  Q
    ||||||||||||||||||||||||||  |||||| ||||||||||||| ||||    
T  2144930 atacttttactataaatatagaccttgtatcagatgtaaaccttgagagagag 2144878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 570 - 609
Target Start/End: Original strand, 25804009 - 25804048
Alignment:
Q  570 gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  25804009 gagatagagggggctcaaacaagggtttagaatggcaaca 25804048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 570 - 609
Target Start/End: Complemental strand, 34477349 - 34477310
Alignment:
Q  570 gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  34477349 gagatagagggggctgaaacaagggtttagaaaggcaaca 34477310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 570 - 609
Target Start/End: Complemental strand, 34479714 - 34479675
Alignment:
Q  570 gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  34479714 gagatagagggggctgaaacaagggtttagaaaggcaaca 34479675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 444
Target Start/End: Complemental strand, 6661648 - 6661594
Alignment:
Q  390 tttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 444  Q
    ||||||||| | |||||| | ||||||| | ||||||||||||||||||||||||    
T  6661648 tttttgtactgaatgaaggaagatttgaagtaaatatattttgaaagggaatatt 6661594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 5779217 - 5779168
Alignment:
Q  288 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaga 337  Q
    ||||| |||||||||| |||| |||| ||| |||||||||||||||||||    
T  5779217 tgacttaaaatttgatagatgaagaagattattgctaaaaatataaaaga 5779168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 511 - 578
Target Start/End: Original strand, 4897638 - 4897710
Alignment:
Q  511 tccaaatttatgagttatacttttactataaata-----tagaccttaaatcagagtaaaccttgagatagag 578  Q
    ||||| ||||||||  ||||||||||||||||||     ||||||||  ||||||||||||||||||| ||||    
T  4897638 tccaattttatgagggatacttttactataaataatatatagaccttgcatcagagtaaaccttgagagagag 4897710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 220; Significance: 1e-121; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 51709 - 52043
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||       |||| |||||||||| |||||||||||||||||    
T  51709 tgttgtagtatgactcaaaatttgatggatggagaataatgttgctaaaaatataaaagatttgtttcaaatatattttgtggtgaaaatatatttatgg 51808  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  51809 acaataaatatatttttgtaccgtataaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 51908  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt--gagat 574  Q
    ||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | ||||| ||  |||||    
T  51909 agaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttgtatcatactaaactttgagagat 52008  T
Q  575 agagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||| |||||||||||||||    
T  52009 agagggggctgaaacaagggtttagaatggcaaca 52043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 278 - 337
Target Start/End: Original strand, 50159 - 50218
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaga 337  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  50159 tgttgtagtatgactcaaaatttgatggatgaagaataatgttgctaaaaatataaaaga 50218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 528 - 609
Target Start/End: Complemental strand, 183976 - 183896
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||||||  |||||||||||| ||||||||||  |||||||||||| | ||||||| |||||||    
T  183976 tactttcactataaatatagaccttgtatcagagtaaactttgagataga-agggctgaaacaaaggtttagaaaggcaaca 183896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 170076 - 170118
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccg 400  Q
    ||||||||||||||| |||||||| ||||||||||||||||||    
T  170076 tgctgaaaatatattcatggacaacaaatatatttttgtaccg 170118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 277 - 609
Target Start/End: Complemental strand, 42924095 - 42923765
Alignment:
Q  277 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatg 376  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||||||    
T  42924095 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 42923996  T
Q  377 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 476  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||||||||    
T  42923995 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaaagaaatattatatttttgatgcaaatattctttcactgaag 42923896  T
Q  477 gagnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt--gagat 574  Q
    |||         |||||||||    ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||  |||||    
T  42923895 gagaacaaataagtatcttca----ggtgttcgttccaaatttatgagttatacttttactataaatatagaccttgaatcatagtaaaccttgagagat 42923800  T
Q  575 agagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||| ||||||||||||| |||||||||||||||    
T  42923799 agaggaggctgaaacaagggtttagaatggcaaca 42923765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 42452449 - 42452782
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  42452449 tgttgtagtatgacttaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 42452548  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  42452549 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 42452648  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 575  Q
    ||           |||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||  ||||||| |||| | ||||||    
T  42452649 agaaaaaaaaaatgtatcttcggtgtggtatttgttccaaatttatgagttatacttttattataaatatagacattgtatcagagcaaacttggagata 42452748  T
Q  576 gagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||| ||||||| |||||||    
T  42452749 gagggggctgaaacaagggtttagaaaggcaaca 42452782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 23452829 - 23452493
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||| ||||||||||| ||||||||    
T  23452829 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttatgctgaaaataaatttatgg 23452730  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  23452729 acaataaatatatttttgtatcgtatgaaggacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 23452630  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gag 572  Q
    ||          ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||    |||    
T  23452629 agaaaaaaaaaagtaccttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 23452530  T
Q  573 atagagggggctgaaacaaggatttagaatggcaaca 609  Q
    | ||||||||||||||||||| ||||||| |||||||    
T  23452529 acagagggggctgaaacaagggtttagaaaggcaaca 23452493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 278 - 578
Target Start/End: Complemental strand, 35216184 - 35215883
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  35216184 tgttgtagtatgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 35216085  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||    
T  35216084 acaataaatatatttttgtatcgtataaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcagatattctttcactgaagg 35215985  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 576  Q
    ||          | |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| |||||| ||    
T  35215984 agaaaaaaaaatgaatcttcggtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 35215885  T
Q  577 ag 578  Q
    ||    
T  35215884 ag 35215883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 278 - 552
Target Start/End: Complemental strand, 35218565 - 35218290
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  35218565 tgttgtagtatgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 35218466  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||    
T  35218465 acaataaatatatttttgtatcgtataaagaacgatttgatgcaaatatattttgaaagagaatattatatttttgatgcaaatattctttcactgaagg 35218366  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacctt 552  Q
    ||          | ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  35218365 agaaaaaaaaacgaatcttcagtgtggtatttgctccaaatttatgagttatacttttactataaatatagacctt 35218290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 278 - 548
Target Start/End: Complemental strand, 27583907 - 27583643
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||       |||| ||||||||||||||| |||||||||||     
T  27583907 tgttgtagtatgactcaaattttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaagatatatttatga 27583808  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    ||||||||||||||||| |||| ||||||| |  |||||||||||||||||||||||| ||||||       |||||||||||||||||| |||||||||    
T  27583807 acaataaatatatttttataccatatgaaggaatatttgatgcaaatatattttgaaaaggaata-------tttgatgcaaatattctttcactgaagg 27583715  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatataga 548  Q
    ||           |||||||||| ||| ||| |||||||||||||||||||||| |||  |||||||||||||    
T  27583714 agaaaaaagaaatgtatcttcagcgtgatatccgttccaaatttatgagttata-tttctctataaatataga 27583643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 288 - 444
Target Start/End: Complemental strand, 28568740 - 28568584
Alignment:
Q  288 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatggacaataaata 387  Q
    |||||||||||||||| |||| |||||||||||||||||| |||||||||       |||| |||||||||  |||||||||||||||||||||||||||    
T  28568740 tgactcaaaatttgatagatgaagaatattgttgctaaaactataaaagatttgtttcaaatatattttgttttgaaaatatatttatggacaataaata 28568641  T
Q  388 tatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 444  Q
    |||||||||| ||| ||||| | ||||||||||||||||||||||||||||||||||    
T  28568640 tatttttgtatcgtgtgaaggaagatttgatgcaaatatattttgaaagggaatatt 28568584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 278 - 407
Target Start/End: Complemental strand, 27136505 - 27136368
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctga--------aaatat 369  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||       |||| |||||||||| |||        ||||||    
T  27136505 tgttgtagtatgactcaaaatttgatggatgaagaatattggtgctaaaaatataaaagatttgtttcaaatatattttgtgttgaaaatatataaatat 27136406  T
Q  370 atttatggacaataaatatatttttgtaccgtatgaag 407  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  27136405 atttatggaaaataaatatatttttgtaccgtatgaag 27136368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 358 - 444
Target Start/End: Original strand, 15693669 - 15693755
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 444  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||| |||||    
T  15693669 tgctgaaaatatatttatgggcaataaatatatttttgtaccgtatgaaggaagatttgatgcaaatatatttttaaaggggatatt 15693755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 40032396 - 40032314
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  40032396 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 40032314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 24162548 - 24162468
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  24162548 acttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 24162468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 509 - 601
Target Start/End: Complemental strand, 37963283 - 37963191
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||| |||||||   ||||||||||||||||||||||| ||  || |||||||||||||||||||||||||||||||||||| |||||||    
T  37963283 gttccaattttatgatggatacttttactataaatatagactttgtataagagtaaaccttgagatagagggggctgaaacaagggtttagaa 37963191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 22163282 - 22163203
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| ||  ||||| |||||| |||||||||||||||||||||||||||||||||| |||||||    
T  22163282 cttttactataaatatagacattgtatcagtgtaaactttgagatagagggggctgaaacaaggatttagaaaggcaaca 22163203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 285 - 373
Target Start/End: Complemental strand, 34575696 - 34575608
Alignment:
Q  285 gtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatattt 373  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||        ||| ||||||||||||||||||||||||    
T  34575696 gtatgactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgttctaaatatattttgtgctgaaaatatattt 34575608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 515 - 609
Target Start/End: Complemental strand, 31733115 - 31733021
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||  || |||||||||||||||||||| ||  | |||||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  31733115 aatttatgagggatgcttttactataaatatagactttgtaacagagtaaacattgagatagagggggctgaaacaagggtttagaaaggcaaca 31733021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 13910380 - 13910300
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  13910380 acttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 13910300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 19504681 - 19504601
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  19504681 acttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 19504601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 27104718 - 27104798
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| || |||| |||||||    
T  27104718 acttttactataaatatagaccttgtatcagagaaaactttgagatagagggggctgaaacaagggttcagaaaggcaaca 27104798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 530 - 601
Target Start/End: Complemental strand, 11578439 - 11578368
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||||||| ||||| ||||| |||||||||||| |||||||||||||| |||||||    
T  11578439 cttttactataaatatagaccttatatcagggtaaatcttgagatagagtgggctgaaacaagggtttagaa 11578368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 530 - 609
Target Start/End: Original strand, 19007560 - 19007639
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||| | ||  |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  19007560 cttttactataaatataggctttgtatcatagtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 19007639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 358 - 429
Target Start/End: Original strand, 39286971 - 39287042
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatatt 429  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||  | |||||||||||||||||||    
T  39286971 tgcttaaaatatatttatggacaataaatatatttttgtaccatatgaatgaagatttgatgcaaatatatt 39287042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 531 - 609
Target Start/End: Complemental strand, 6264479 - 6264401
Alignment:
Q  531 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||||| | ||||||| |||||||    
T  6264479 ttttactataaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaaaggtttagaaaggcaaca 6264401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 515 - 601
Target Start/End: Original strand, 17849022 - 17849108
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||  || ||||||||||||||||| || ||  ||||| ||||||||||||||||||||||||||||||||| |||||||    
T  17849022 aatttatgagggatgcttttactataaatataaacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 17849108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 22287674 - 22287592
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  || | ||||||| |||||||| ||||||||||||||||| ||||||| |||||||    
T  22287674 atacttttactataaatatagaccttgtattaaagtaaactttgagatatagggggctgaaacaagggtttagaaaggcaaca 22287592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 22407747 - 22407665
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  ||||||||||||  ||||||| |||| |||||||||||| ||||||| |||||||    
T  22407747 atacttttactataaatatagaccttgtatcagagtaaactgtgagatatagggtgctgaaacaagggtttagaaaggcaaca 22407665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 42064432 - 42064514
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  ||||||| |||| | ||||||||||| |||||||||||| ||||||| |||||||    
T  42064432 atacttttactataaatatagaccttgtatcagagcaaacttggagatagagggagctgaaacaagggtttagaaaggcaaca 42064514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 527 - 591
Target Start/End: Complemental strand, 12342748 - 12342684
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaa 591  Q
    |||||||||||||||||||| || ||  |||||||||||||||||||||||||||||||||||||    
T  12342748 atacttttactataaatatacacattgtatcagagtaaaccttgagatagagggggctgaaacaa 12342684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 359 - 444
Target Start/End: Original strand, 7502638 - 7502723
Alignment:
Q  359 gctgaaaatatatttatggacaataaatatatttttgtaccgtatga-agaacgatttgatgcaaatatattttgaaagggaatatt 444  Q
    |||||||||||||||||| |||||||| |||||||||||  |||||| |||| ||||||||||||||||||||| ||||| ||||||    
T  7502638 gctgaaaatatatttatgaacaataaaaatatttttgtattgtatgacagaa-gatttgatgcaaatatatttttaaaggaaatatt 7502723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 531 - 609
Target Start/End: Complemental strand, 15539809 - 15539731
Alignment:
Q  531 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||| ||  ||||| ||||||||||||||| |||||| |||||||||| ||||||||| |||||    
T  15539809 ttttactataaatatagacattgtatcagtgtaaaccttgagatatagggggttgaaacaagggtttagaatgacaaca 15539731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 601
Target Start/End: Complemental strand, 18800640 - 18800566
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||||||||  ||||| |||||| | |||||| ||||||||||||||||| |||||||    
T  18800640 atacttttactataaatatagaccttgtatcagggtaaacatggagatatagggggctgaaacaagggtttagaa 18800566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 515 - 609
Target Start/End: Original strand, 28196542 - 28196636
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||  || |||||||||||||||||  | ||  |||||||||||| |||||||||||||||||||||||| | ||||||| |||||||    
T  28196542 aatttatgagggattcttttactataaatatatgctttgtatcagagtaaacattgagatagagggggctgaaacaaaggtttagaaaggcaaca 28196636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 383 - 479
Target Start/End: Complemental strand, 34575617 - 34575528
Alignment:
Q  383 aaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag 479  Q
    ||||||||||||||||| ||| ||| |  |||||||||||||||||||||||||||||||       |||||||||||||||||| |||||||||||    
T  34575617 aaatatatttttgtaccatataaaggaaaatttgatgcaaatatattttgaaagggaata-------tttgatgcaaatattctttcactgaaggag 34575528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 358 - 436
Target Start/End: Complemental strand, 41303535 - 41303457
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaag 436  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| ||||| | || ||||| |||||||||||| ||||    
T  41303535 tgctgaaaatatatttatggacagtaaatataattttgtaccgtgtgaaggaagaattgattcaaatatatttttaaag 41303457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 528 - 601
Target Start/End: Complemental strand, 45280322 - 45280249
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||| |||||||||||| |||||  ||||||| |||| |||||||||||||||||||||||||| |||||||    
T  45280322 tactttcactataaatatataccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaa 45280249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 533 - 609
Target Start/End: Original strand, 3022086 - 3022162
Alignment:
Q  533 ttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||| ||  ||||||||||||||||||||| ||| ||||||||||||| |||| || |||||||    
T  3022086 ttactataaatatagactttgtatcagagtaaaccttgagatataggaggctgaaacaagggtttataaaggcaaca 3022162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 530 - 601
Target Start/End: Complemental strand, 11739895 - 11739824
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||| ||  || || ||||||||||||||||||||||||| ||||||| |||||||    
T  11739895 cttttactataaatatagacattgtattagtgtaaaccttgagatagagggggctggaacaagggtttagaa 11739824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 358 - 437
Target Start/End: Complemental strand, 41304884 - 41304806
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagg 437  Q
    |||||| |||||||||||||| | |||||||||||||||| | ||||||| | ||||||||||||||||||||| |||||    
T  41304884 tgctgacaatatatttatggatagtaaatatatttttgta-catatgaaggaagatttgatgcaaatatatttttaaagg 41304806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 6259153 - 6259071
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  || ||| ||||| |||||||||||| || |||||||||  ||||||| |||||||    
T  6259153 atacttttactataaatatagaccttgtattagactaaactttgagatagaggaggatgaaacaagagtttagaaaggcaaca 6259071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 531 - 609
Target Start/End: Complemental strand, 19502345 - 19502267
Alignment:
Q  531 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||  ||||||| |||| | |||||| ||||||||||||||||  ||||||| |||||||    
T  19502345 ttttactataaatatagaccttgtatcagagcaaacttggagataaagggggctgaaacaagagtttagaaaggcaaca 19502267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 43623906 - 43623824
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||| |||||||||  ||||||||||||   ||||||||||||| |||||||| | ||||||| |||||||    
T  43623906 atacttttactataaaaatagaccttgtatcagagtaaactgggagatagaggggggtgaaacaatggtttagaaaggcaaca 43623824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 21521033 - 21520949
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgaga--tagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| |||||  |||||| ||||| ||||||  |||| ||||||||||||||| ||||||| |||||||    
T  21521033 atacttttactataaatataaaccttgtatcagactaaactttgagagatagatggggctgaaacaagggtttagaaaggcaaca 21520949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 28568346 - 28568395
Alignment:
Q  288 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaga 337  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  28568346 tgactcaaaatttgatggatgaagaatattgttgttaaaaatataaaaga 28568395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 509 - 578
Target Start/End: Original strand, 40699209 - 40699278
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagag 578  Q
    ||||||| ||| ||||  ||||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  40699209 gttccaattttctgagggatacttttactataaatatagaccttgcatcagagtaaaccttgagagagag 40699278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 530 - 593
Target Start/End: Original strand, 14837193 - 14837256
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaagg 593  Q
    |||||||| ||||||||||| ||  ||||| |||||||||||||||||||| ||||||||||||    
T  14837193 cttttactgtaaatatagacattgtatcagtgtaaaccttgagatagagggagctgaaacaagg 14837256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 531 - 609
Target Start/End: Original strand, 38020064 - 38020142
Alignment:
Q  531 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||| ||  ||| | |||||||| ||||||||||||| || ||||||| ||||||| |||||||    
T  38020064 ttttactataaatatagacattgtatcggtgtaaacctggagatagagggggttggaacaagggtttagaaaggcaaca 38020142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 515 - 601
Target Start/End: Complemental strand, 45239331 - 45239240
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcaga-gtaaaccttgaga----tagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||  || ||||||||||||||||||||| |  |||||| |||||||||||||    |||||||||||||||||| |||||||||    
T  45239331 aatttatgagggatgcttttactataaatatagaccattcatcagatgtaaaccttgagagagatagagggggctgaaacaatgatttagaa 45239240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 528 - 601
Target Start/End: Original strand, 22874060 - 22874133
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||| ||||||||| || | ||  ||||||| |||||| |||||||||||||||||||||||| |||||||    
T  22874060 tacttttgctataaatacaggctttgtatcagagcaaacctggagatagagggggctgaaacaagggtttagaa 22874133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 509 - 573
Target Start/End: Complemental strand, 20147104 - 20147040
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgaga 573  Q
    ||||||| ||||||||  ||| ||||||||||||||||||||||  |||| ||||||||||||||    
T  20147104 gttccaattttatgaggaatatttttactataaatatagaccttgtatcaaagtaaaccttgaga 20147040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 538 - 601
Target Start/End: Complemental strand, 34979906 - 34979843
Alignment:
Q  538 ataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||| ||  || || ||||||||||||||||||||||||||||||||  |||||||    
T  34979906 ataaatatagacattgtattagtgtaaaccttgagatagagggggctgaaacaagcgtttagaa 34979843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 334
Target Start/End: Original strand, 15693583 - 15693629
Alignment:
Q  288 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaa 334  Q
    ||||| ||||||||||||||| | |||||||||||||||||||||||    
T  15693583 tgacttaaaatttgatggatgaataatattgttgctaaaaatataaa 15693629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 528 - 609
Target Start/End: Complemental strand, 5377770 - 5377685
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||||||   |||||| |||| ||    |||||||||||| ||||||||||| ||||||| |||||||    
T  5377770 tactttcactataaatatagaccttgtttcagagcaaactttgagagagatagaggggactgaaacaagggtttagaaaggcaaca 5377685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 601
Target Start/End: Original strand, 17848350 - 17848434
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||  || |||||||||||||||||| | ||  |||||  ||| ||||||||||||||||||| |||| ||| |||||||    
T  17848350 aatttatgagggattcttttactataaatataggctttgtatcag--taatccttgagatagagggggctcaaacgagggtttagaa 17848434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 527 - 578
Target Start/End: Original strand, 35107217 - 35107268
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagag 578  Q
    ||||||||||||||||||||||| ||  |||| ||||||||||||| |||||    
T  35107217 atacttttactataaatatagacattgtatcatagtaaaccttgaggtagag 35107268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 570 - 609
Target Start/End: Original strand, 38020162 - 38020201
Alignment:
Q  570 gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  38020162 gagatagagggggctgaaacaagggtttagaaaggcaaca 38020201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 41303623 - 41303573
Alignment:
Q  288 tgactcaaaatttgatggatggagaatattgttgcta-aaaatataaaaga 337  Q
    ||||||| ||||||||||||| |||| |||||||||| |||||||||||||    
T  41303623 tgactcagaatttgatggatgaagaagattgttgctaaaaaatataaaaga 41303573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 589
Target Start/End: Complemental strand, 38414340 - 38414311
Alignment:
Q  560 agtaaaccttgagatagagggggctgaaac 589  Q
    ||||||||||||||||||||||||||||||    
T  38414340 agtaaaccttgagatagagggggctgaaac 38414311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 527 - 578
Target Start/End: Complemental strand, 17897580 - 17897528
Alignment:
Q  527 atacttttactataaatatagaccttaaatcaga-gtaaaccttgagatagag 578  Q
    ||||||||||||||||||||||||||  |||||| ||||| |||||| |||||    
T  17897580 atacttttactataaatatagaccttgtatcagatgtaaaacttgaggtagag 17897528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 517 - 569
Target Start/End: Complemental strand, 20146955 - 20146903
Alignment:
Q  517 tttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt 569  Q
    ||||||||  ||| ||||||||||||||||||||||  |||| ||||||||||    
T  20146955 tttatgagggatatttttactataaatatagaccttgtatcaaagtaaacctt 20146903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 530 - 578
Target Start/End: Original strand, 20589581 - 20589629
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagag 578  Q
    |||||||||||||||||||||||  ||||||  ||||||||||| ||||    
T  20589581 cttttactataaatatagaccttgtatcagatgaaaccttgagagagag 20589629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 98)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 47905956 - 47906293
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  47905956 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 47906055  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  47906056 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcattgaagg 47906155  T
Q  478 agnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt------ga 571  Q
    ||         ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||      ||    
T  47906156 agaaaaaaaaagtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagaga 47906255  T
Q  572 gatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||| |||||||||||||||    
T  47906256 gatagagggggctgaaacaagggtttagaatggcaaca 47906293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 31736115 - 31735779
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  31736115 tgttgtagtatgactcaaaatttgatggaaggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 31736016  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  31736015 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 31735916  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacct----tgag 572  Q
    ||          ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| |    ||||    
T  31735915 agaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgaatgag 31735816  T
Q  573 atagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||| |||||||| ||||||| |||||||    
T  31735815 atagagggggctaaaacaagggtttagaaaggcaaca 31735779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 17325227 - 17324894
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||| | |||||||||||||||||    
T  17325227 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgagttgaaaatatatttatgg 17325128  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||| |||||||||    
T  17325127 acaataaatatatttttgtaccgtatgaaaaacgatttgatgcaaatatattttgcaagggaatattatattttttatgcaaatattctttcactgaagg 17325028  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 575  Q
    ||           |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||  |||||    
T  17325027 agaaaaaaaaaacgtatcttcagggtgatattcgttccaaatttatgagttatacttttactataaatatagaccttgaaccagagtaaacctgaagata 17324928  T
Q  576 gagggggctgaaacaaggatttagaatggcaaca 609  Q
     |||||||| |||||||| |||||||||||||||    
T  17324927 cagggggctaaaacaagggtttagaatggcaaca 17324894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 28998844 - 28998511
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||        ||| ||||||||||||||||||||||||||||    
T  28998844 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaactataaaagatttgtttaaaatatattttgtgctgaaaatatatttatgg 28998745  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||| |||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  28998744 acaataaatacatttttgtaccgtacgaagaaatatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 28998645  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 575  Q
    ||           |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||    
T  28998644 agaaaaaaaaaccgtatatttagtgtggtattcgttccaaatttatgagttatacttttactataaatatagactttgaatcagagtaaactttgagata 28998545  T
Q  576 gagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||| ||||||||||||| ||||||||| |||||    
T  28998544 gaggaggctgaaacaagggtttagaatgacaaca 28998511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 29004560 - 29004227
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||        ||| ||||||||||||||||||||||||||||    
T  29004560 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaactataaaagatttgtttaaaatatattttgtgctgaaaatatatttatgg 29004461  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||| |||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  29004460 acaataaatacatttttgtaccgtacgaagaaatatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 29004361  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 575  Q
    ||           |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||    
T  29004360 agaaaaaaaaaccgtatatttagtgtggtattcgttccaaatttatgagttatacttttactataaatatagactttgaatcagagtaaactttgagata 29004261  T
Q  576 gagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||| ||||||||||||| ||||||||| |||||    
T  29004260 gaggaggctgaaacaagggtttagaatgacaaca 29004227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 39931762 - 39932096
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  39931762 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 39931861  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||  | ||||||    
T  39931862 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatacttttgatgcaaatattcttttattgaagg 39931961  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt--gagat 574  Q
    ||          ||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||  || |||  |||| ||  |||||    
T  39931962 agaaaaaaaaacgtatcttcagtgtagtattcgttccaaatttatgagttatatgtttactataaatatagaccttgtatgagacaaaactttgagagat 39932061  T
Q  575 agagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||| ||||||| |||||||    
T  39932062 agagggggctgaaacaagggtttagaaaggcaaca 39932096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 278 - 578
Target Start/End: Original strand, 24325347 - 24325648
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||| |||||||||||||||||||||||    
T  24325347 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaatatatttatgg 24325446  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||    
T  24325447 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagtgaatattatatttttgatgcaaatattctttcactgaagg 24325546  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 576  Q
    ||          ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||| |||||| ||    
T  24325547 agaaaaaaaaatgtatctttagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcagagcaaactttgagagag 24325646  T
Q  577 ag 578  Q
    ||    
T  24325647 ag 24325648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 278 - 601
Target Start/End: Complemental strand, 9460013 - 9459683
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  9460013 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 9459914  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  9459913 acaataaatatatttttataccgtatgaagaacaatttaatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcattgaagg 9459814  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt------g 570  Q
    ||          ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||      |    
T  9459813 agaaaaaaaaacgtatcttcattgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 9459714  T
Q  571 agatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||||| |||||||    
T  9459713 agatagagggggctgaaacaagggtttagaa 9459683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 9463840 - 9463502
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  9463840 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 9463741  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    ||||||||||||||||| || |||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  9463740 acaataaatatatttttatatcgtatgaagaacaatttaatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcattgaagg 9463641  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt------g 570  Q
    ||          ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||      |    
T  9463640 agaaaaaaaaacgtatcttcattgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 9463541  T
Q  571 agatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  9463540 agatagagggggctgaaacaagggtttagaaaggcaaca 9463502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 278 - 582
Target Start/End: Original strand, 48664852 - 48665167
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  48664852 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 48664951  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag- 476  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| || |||||     
T  48664952 acaataaatatatttttgtaccgtatgaagaacgatttgatgcacatatattttgaaagggaatattatatttttgatgcaaatattctttcattgaaga 48665051  T
Q  477 ----------gagnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaac 566  Q
               |          ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  48665052 aagaaaaaaaaaaaaaaaaaacgtatcttcagtgtagtatttgttccaaatttatgagttatacttttactataaatatagaccttgaatcagagtaaac 48665151  T
Q  567 cttgagatagaggggg 582  Q
    ||| ||||||||||||    
T  48665152 cttaagatagaggggg 48665167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 278 - 578
Target Start/End: Complemental strand, 15295439 - 15295137
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  15295439 tgttgtagtatgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 15295340  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||    
T  15295339 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagcgaatattatatttttgatgcaaatattctttcactgaagg 15295240  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 575  Q
    ||           ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||  ||||||| |||| |||||| |    
T  15295239 agaaaaaaaaaatgtatcttcagtgtggtattcgttcctaatttatgagttatatgtttactataaatatagaccttgtatcagagcaaactttgagaga 15295140  T
Q  576 gag 578  Q
    |||    
T  15295139 gag 15295137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 27337532 - 27337196
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||       |||| ||||||||||||||||||||||||||||    
T  27337532 tgttgtagtatgactccaaatttgatggatggggaatattgttgctaaaaatatataagatttgtttcaaatatattttgtgctgaaaatatatttatgg 27337433  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  27337432 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttaactgaagg 27337333  T
Q  478 -agnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gag 572  Q
     |          ||||||||  ||||||||| |||||||||||||| |||||||||||||||||||||||||||||  || ||  ||||| ||    |||    
T  27337332 aaaaaaaaaaacgtatcttcgatgtggtatttgttccaaatttatgcgttatacttttactataaatatagaccttgtattaggctaaactttgagagag 27337233  T
Q  573 atagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  27337232 atagagggggctgaaacaagggtttagaaaggcaaca 27337196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 27339730 - 27339388
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatat----tt 373  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||    ||    
T  27339730 tgttgtagtatgactccaaatttgacggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatatattt 27339631  T
Q  374 atggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactg 473  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  27339630 atggacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactg 27339531  T
Q  474 aagg---agnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt- 569  Q
    ||||   |          ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  || ||  ||||| ||     
T  27339530 aaggaaaaaaaaaagaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtattaggctaaactttg 27339431  T
Q  570 ---gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
       ||||||||||||||||||||||||  |||||| |||||||    
T  27339430 agagagatagagggggctgaaacaagggcttagaaaggcaaca 27339388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 2949815 - 2949489
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  2949815 tgttatagtatgactcaaaatttcatggatgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 2949716  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag- 476  Q
    ||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||     
T  2949715 acaataaatatatttttgtattgtatgaagaatgatttgatgcaaatatattttgaaagggaatattatatttttgatacaaatattctttcactgaaga 2949616  T
Q  477 gagnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 576  Q
    ||          ||||||      |||||||||||||||||||||||||||||||||||| |||||||||||  || |||| ||| ||||||||||||||    
T  2949615 gaaaaaaaaaacgtatct------tggtattcgttccaaatttatgagttatacttttacaataaatatagatattgaatccgagaaaaccttgagatag 2949522  T
Q  577 agggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||| ||||||||| |||||    
T  2949521 agggggctgaaacaagggtttagaatgacaaca 2949489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 305 - 609
Target Start/End: Complemental strand, 21948756 - 21948445
Alignment:
Q  305 gatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatggacaataaatatatttttgtaccgtatg 404  Q
    |||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21948756 gatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatggacaataaatatatttttgtatcgtatg 21948657  T
Q  405 aagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag---nnnnnnnnngtatcttcagtgt 501  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||            |||||||||||||    
T  21948656 aagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcacagaaggaggaaaaaaaaaacgtatcttcagtgt 21948557  T
Q  502 ggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaacaaggattt 597  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||  |||| | ||||| ||    |||||||||||||||||||||||| |||    
T  21948556 ggtattcgttccaaatttatgagttatatgtttactataaatatagaccttgtatcatactaaactttgagagagatagagggggctgaaacaagggttt 21948457  T
Q  598 agaatggcaaca 609  Q
    |||| |||||||    
T  21948456 agaaaggcaaca 21948445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 277 - 467
Target Start/End: Complemental strand, 4131883 - 4131693
Alignment:
Q  277 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatg 376  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||| |||| |||||||||||    
T  4131883 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgttgaacatatatttatg 4131784  T
Q  377 gacaa-taaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattctt 467  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4131783 gacaaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatat-tttgatgcaaatattctt 4131693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 277 - 467
Target Start/End: Complemental strand, 45694025 - 45693835
Alignment:
Q  277 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatg 376  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||||| ||||||||||||||    
T  45694025 gtgttgtactatgattcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctaaaaatatatttatg 45693926  T
Q  377 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattctt 467  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| ||||||||||||||    
T  45693925 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagagaataatatattttttatgcaaatattctt 45693835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 278 - 463
Target Start/End: Complemental strand, 6115718 - 6115532
Alignment:
Q  278 tgttgtagtatgactcaaaa-tttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatg 376  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||||||    
T  6115718 tgttgtaggatgactcaaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 6115619  T
Q  377 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatat 463  Q
    ||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  6115618 gacaataaatatatttttgtatcgtatgaatgacgatttgatgcaaatatattttgaaagggaatattatattttttatgcaaatat 6115532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 278 - 466
Target Start/End: Original strand, 6997214 - 6997395
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||       |||| |||||||||||| |||||||| ||||||    
T  6997214 tgttatagtatgactcaaaatttgatggatggagaatattattgctaaaaatataaaagatttgtttcaaatatattttgtgctaaaaatata-ttatgg 6997312  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattct 466  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||      ||||||| ||||||||||| |||||||||||||||||    
T  6997313 acaataaatatatttttataccgtatgaagaacgatttgatgcaaa------ttgaaagagaatattatatttttgatgcaaatattct 6997395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 390 - 578
Target Start/End: Complemental strand, 46432207 - 46432017
Alignment:
Q  390 tttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag--nnnnnnnn 487  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||              
T  46432207 tttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaaggagaaaaaaaaaa 46432108  T
Q  488 ngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagag 578  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| |||||| ||||    
T  46432107 cgtatcttcactgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagag 46432017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 400 - 608
Target Start/End: Complemental strand, 2510801 - 2510583
Alignment:
Q  400 gtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg------agnnnnnnnnngtatc 493  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||      ||         ||||     
T  2510801 gtatgaagaacgatttgatgcaaatatattttgaaagagaatattatatttttgatgcaaatattctttcactgaaggagggaaagaaaaaaaacgtatt 2510702  T
Q  494 ttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaac 589  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||    ||||||||||||||||||||    
T  2510701 ttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggctgaaac 2510602  T
Q  590 aaggatttagaatggcaac 608  Q
    |||| |||| || ||||||    
T  2510601 aagggtttataaaggcaac 2510583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 316 - 476
Target Start/End: Original strand, 6996067 - 6996221
Alignment:
Q  316 ttgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgattt 415  Q
    ||||||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6996067 ttgttgctaaaaatataaaagacttgtttcaaatatattttgtgctgaaaatatatttatggacaatacatatatttttgtaccgtatgaagaacgattt 6996166  T
Q  416 gatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 476  Q
    |||| |||      ||||||||||||||||||| |||| ||||||||||||| ||||||||    
T  6996167 gatgtaaa------ttgaaagggaatattatatttttgttgcaaatattctttcactgaag 6996221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 276 - 393
Target Start/End: Complemental strand, 46432638 - 46432521
Alignment:
Q  276 agtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttat 375  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||    
T  46432638 agtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttat 46432539  T
Q  376 ggacaataaatatatttt 393  Q
    ||||||||||||||||||    
T  46432538 ggacaataaatatatttt 46432521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 278 - 431
Target Start/End: Original strand, 16561131 - 16561284
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||| |||||| |||||||||| |||||| |||||||||||||||||||||||||| |       |||| |||||||||||||||||||||||||| |    
T  16561131 tgttgttgtatgattcaaaatttgttggatgaagaatattgttgctaaaaatataaaatatttgtttcaaatatattttgtgctgaaaatatatttattg 16561230  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatatttt 431  Q
    ||||||||||| |||||||||||||||||| |  ||||||  ||||||||||||    
T  16561231 acaataaatatctttttgtaccgtatgaaggaatatttgaaacaaatatatttt 16561284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 502 - 609
Target Start/End: Complemental strand, 6996065 - 6995958
Alignment:
Q  502 ggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||| ||||||| | |||||||    
T  6996065 ggtattcgttccaaatttatgagttatacttttattataaatatagaccttgaatcagagtaaatcttgagatagagggggccgaaacaacggtttagaa 6995966  T
Q  602 tggcaaca 609  Q
     |||||||    
T  6995965 aggcaaca 6995958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 358 - 444
Target Start/End: Complemental strand, 11693666 - 11693580
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  11693666 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaaggaagatttgatgcaaatatatttttaaagggaatatt 11693580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 412 - 582
Target Start/End: Complemental strand, 26520580 - 26520403
Alignment:
Q  412 atttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggagnnnnnnnnn--------gtatcttcagtgtgg 503  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||| ||                 ||||||||||||||     
T  26520580 atttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcaccgaagaagaaaaaaacaaaagaaatgtatcttcagtgtga 26520481  T
Q  504 tattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagaggggg 582  Q
    |||||||||||||||||| ||||||| || | |||||||||||||| ||  ||||||||||||||||||||||||||||    
T  26520480 tattcgttccaaatttataagttatatttct-ctataaatatagactttgtatcagagtaaaccttgagatagaggggg 26520403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 444
Target Start/End: Original strand, 14352759 - 14352842
Alignment:
Q  361 tgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 444  Q
    |||||||||||||||| | | |||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  14352759 tgaaaatatatttatgaatagtaaatatatttttgtaccgtatgaaggaagatttgatgcaaatatatttttaaagggaatatt 14352842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 13215022 - 13215104
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||||||||||  |||||||||||||||||||||||||| ||||||| |||||||    
T  13215022 atacttttactataaatatagaccttgtatcagagtaaattttgagatagagggggctgaaacaagggtttagaaaggcaaca 13215104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 41646861 - 41646943
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||| |||| ||||||| |||||||    
T  41646861 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaataagggtttagaaaggcaaca 41646943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 47451589 - 47451671
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||| |||||||| ||| |||||||||||    
T  47451589 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggcttaaacaagggtttggaatggcaaca 47451671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 517 - 598
Target Start/End: Complemental strand, 49495549 - 49495468
Alignment:
Q  517 tttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggattta 598  Q
    ||||||||  ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||| ||||    
T  49495549 tttatgagggatacttttactataaatatagactttgtatcagagtaaaccttgagatagagggggctgaaacaagggttta 49495468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 358 - 444
Target Start/End: Complemental strand, 13785748 - 13785662
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 444  Q
    |||||||||||||||||| || | |||||||||||||||| ||||||||| | ||||||||||||||||||||| ||| ||||||||    
T  13785748 tgctgaaaatatatttatagatagtaaatatatttttgtatcgtatgaaggaagatttgatgcaaatatatttttaaaaggaatatt 13785662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 527 - 601
Target Start/End: Complemental strand, 28207406 - 28207332
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||||||| |||||||    
T  28207406 atacttttactataaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaa 28207332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 38925818 - 38925736
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||  || |||| |||||||    
T  38925818 atacttttactataaatatagaccttgtatcagagtaaactttgagatagagggggctgaaacaagagttcagaaaggcaaca 38925736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 530 - 603
Target Start/End: Complemental strand, 14183923 - 14183850
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatg 603  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||| |||||||||||||| |||||||||    
T  14183923 cttttactataaatatagaccatgtatcagagtaaaccttgagatagagagggctgaaacaagggtttagaatg 14183850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 504 - 609
Target Start/End: Original strand, 20302378 - 20302482
Alignment:
Q  504 tattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatg 603  Q
    |||| ||||||||||| | ||| | ||||||| ||||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |    
T  20302378 tatttgttccaaattt-taagtgaaacttttattataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaag 20302476  T
Q  604 gcaaca 609  Q
    ||||||    
T  20302477 gcaaca 20302482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 509 - 609
Target Start/End: Complemental strand, 31423232 - 31423132
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaac 608  Q
    ||||||| |||||| |  ||||||||||||||||||||  | ||  ||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  31423232 gttccaattttatgggagatacttttactataaatataagcattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaac 31423133  T
Q  609 a 609  Q
    |    
T  31423132 a 31423132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 509 - 601
Target Start/End: Original strand, 42922157 - 42922249
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||  ||||||||||||||||||||||  ||  ||||||||||||||| |||||||||||| ||||| |||| |||||||    
T  42922157 gttccaaatttatgagggatacttttactataaatatagattttgtatcagagtaaaccttaagatagagggggttgaaataagggtttagaa 42922249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 513 - 601
Target Start/End: Complemental strand, 50079175 - 50079087
Alignment:
Q  513 caaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||  || |||||||||||||||||||| ||  || || ||||||||||||||||||||||||||||||||| |||||||    
T  50079175 caaatttatgagggatgcttttactataaatatagacattgtattagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 50079087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 51749982 - 51750062
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  51749982 acttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 51750062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 510 - 601
Target Start/End: Complemental strand, 18800925 - 18800835
Alignment:
Q  510 ttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||| ||||||||  ||||||||||||||||||||||||||  ||||||||||||||||||||| | ||||||||||||| | |||||||    
T  18800925 ttccaattttatgagg-atacttttactataaatatagaccttgtatcagagtaaaccttgagatacaaggggctgaaacaaaggtttagaa 18800835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 417 - 479
Target Start/End: Complemental strand, 6115541 - 6115479
Alignment:
Q  417 atgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag 479  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||    
T  6115541 atgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcattgaaggag 6115479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 515 - 601
Target Start/End: Complemental strand, 11457827 - 11457741
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||  || |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||| | |||||||    
T  11457827 aatttatgagggatgcttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaatggtttagaa 11457741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 15823487 - 15823569
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||| ||||||| | |||||| ||||||||||||||||| ||||||| |||||||    
T  15823487 atacttttactataaatatagaccttgtatcaaagtaaacttagagataaagggggctgaaacaagggtttagaaaggcaaca 15823569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 531 - 609
Target Start/End: Original strand, 18307054 - 18307132
Alignment:
Q  531 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||| |||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  18307054 ttttgctataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 18307132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 531 - 609
Target Start/End: Complemental strand, 25248850 - 25248772
Alignment:
Q  531 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  25248850 tttttctagaaatatagactttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 25248772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 531 - 601
Target Start/End: Complemental strand, 25251611 - 25251541
Alignment:
Q  531 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| | |||||||    
T  25251611 ttttactataaatatagactttgtatcagagtaaaccttgagatagagggggctgaaacaaaggtttagaa 25251541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 515 - 601
Target Start/End: Complemental strand, 50077024 - 50076938
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||  || |||||||||||||||||||| ||  ||||| |||||||||||||||||  ||||||||||||||||||||||    
T  50077024 aatttatgagggatgcttttactataaatatagacattgtatcagtgtaaaccttgagatagaaagggctgaaacaaggatttagaa 50076938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 6822958 - 6823038
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||  |||||||||||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  6822958 acttttactatttatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 6823038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 13761780 - 13761860
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  ||||||| |||| | ||||||||| |||||||||||||| ||||||| |||||||    
T  13761780 acttttactataaatatagaccttgtatcagagcaaacttggagatagagagggctgaaacaagggtttagaaaggcaaca 13761860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 16428594 - 16428676
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||   ||| ||||||| ||||| | ||||||||||||||||||||||| ||||||| |||||||    
T  16428594 atacttttactataaatataggttttatatcagagcaaaccattagatagagggggctgaaacaagggtttagaaaggcaaca 16428676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 531 - 609
Target Start/End: Original strand, 17318838 - 17318916
Alignment:
Q  531 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||   ||  |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  17318838 ttttactataaatataggttttgtatcatagtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 17318916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 509 - 601
Target Start/End: Complemental strand, 8347627 - 8347535
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcaga-gtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||| ||||||||   ||||||||||||||| |||||||||  |||||| |||||||||||||||||||||| |||||||||| |||||||    
T  8347627 gttccaattttatgaggggtacttttactataaa-atagaccttgtatcagatgtaaaccttgagatagagggggttgaaacaagggtttagaa 8347535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 28842434 - 28842518
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgaga--tagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| |||||  ||||||| |||| ||||||  |||||||||||||||||||| ||||||| |||||||    
T  28842434 atacttttactataaatataaaccttgtatcagagcaaactttgagagatagagggggctgaaacaagggtttagaaaggcaaca 28842518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 527 - 588
Target Start/End: Complemental strand, 30790734 - 30790673
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 588  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||||||||||| |||||||    
T  30790734 atacttttactataaatatagacattgtatcagagtaaaccttgagatagagggagctgaaa 30790673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 358 - 407
Target Start/End: Original strand, 32260833 - 32260882
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaag 407  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32260833 tgctgaaaatatatttatgaacaataaatatatttttgtaccgtatgaag 32260882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 556 - 609
Target Start/End: Complemental strand, 4131692 - 4131637
Alignment:
Q  556 tcagagtaaaccttgaga--tagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  4131692 tcagagtaaaccttgagagatagagggggctgaaacaaggatttagaatggcaaca 4131637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 361 - 444
Target Start/End: Original strand, 10115572 - 10115653
Alignment:
Q  361 tgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 444  Q
    ||||||||||||||||||||||||||||  |||| | |||||||||| |  |||||||||||||||||||| ||| ||||||||    
T  10115572 tgaaaatatatttatggacaataaatat--ttttatcccgtatgaaggaatatttgatgcaaatatatttttaaacggaatatt 10115653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 10400166 - 10400086
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| |||||||||||||||||  ||||||| ||||   |||||||||||||||||||||||| ||||||||| |||||    
T  10400166 actttttctataaatatagaccttgtatcagagcaaactgggagatagagggggctgaaacaagggtttagaatgacaaca 10400086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 529 - 593
Target Start/End: Original strand, 16231544 - 16231608
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaagg 593  Q
    ||||||||||||||||||||||||  |||| || |||| ||||||||||||||||||||||||||    
T  16231544 acttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgaaacaagg 16231608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 509 - 601
Target Start/End: Original strand, 39462443 - 39462534
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||| | ||| ||||||| ||||||||||||||||||  |||||||||||| |||||||||||  ||||||||||| | |||||||    
T  39462443 gttccaaattt-taagtaatactttcactataaatatagaccttgtatcagagtaaactttgagatagagaaggctgaaacaaaggtttagaa 39462534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 529 - 601
Target Start/End: Original strand, 51752308 - 51752380
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||  |||||||    
T  51752308 acttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaagagtttagaa 51752380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 530 - 601
Target Start/End: Original strand, 2617460 - 2617531
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||| ||||||||||||||||||  ||||||| |||| |||||||||||| ||||||||||||| |||||||    
T  2617460 ctttcactataaatatagaccttgtatcagagcaaactttgagatagaggaggctgaaacaagggtttagaa 2617531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 17186465 - 17186386
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||  ||  ||||||| |||||||||||||||||||||||||| |||| ||||||| |||||||    
T  17186465 cttttaatataaatatagattttgtatcagagcaaaccttgagatagagggggctgaaataagggtttagaaaggcaaca 17186386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 530 - 601
Target Start/End: Original strand, 31489859 - 31489930
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||| ||  || || |||||||||||||||||||||| |||||||||| |||||||    
T  31489859 cttttactataaatatagacattgtattagtgtaaaccttgagatagagggggttgaaacaagggtttagaa 31489930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 528 - 609
Target Start/End: Complemental strand, 9241425 - 9241344
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagag-ggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| | ||  ||||||||||||||| |||||||| ||||||||||||||| ||||||| |||||||    
T  9241425 tacttttactataaatataggctttgtatcagagtaaaccttaagatagaggggggctgaaacaagg-tttagaaaggcaaca 9241344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 6823827 - 6823908
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagataga-gggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||  |||||||||||  ||||||| |||| |||||||||| |||||||||||||||| ||||||| |||||||    
T  6823827 acttttactatttatatagaccttgtatcagagcaaactttgagatagaggggggctgaaacaagggtttagaaaggcaaca 6823908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 528 - 601
Target Start/End: Complemental strand, 12302849 - 12302771
Alignment:
Q  528 tacttttactataaatatagaccttaaatcaga-gtaaaccttgaga----tagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||||||||  |||||| |||||||||||||    |||||||||||||||||||| |||||||    
T  12302849 tacttttactataaatatagaccttgtatcagatgtaaaccttgagagagatagagggggctgaaacaagggtttagaa 12302771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 32260746 - 32260795
Alignment:
Q  288 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaga 337  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  32260746 tgactcaaaatttgatggatgaagaagattgttgctaaaaatataaaaga 32260795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 530 - 591
Target Start/End: Complemental strand, 50248909 - 50248848
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaa 591  Q
    |||||||||||||||||||| ||  ||||| |||||||||||||||||||| ||||||||||    
T  50248909 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggagctgaaacaa 50248848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 529 - 601
Target Start/End: Original strand, 16226110 - 16226182
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||||||  |||| || |||| |||||||||||||| || |||||||| |||||||    
T  16226110 acttttactataaatatagaccttgtatcaaagcaaactttgagatagaggggtctaaaacaagggtttagaa 16226182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 20291400 - 20291480
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  || |||| |||  ||||||||||||| | |||||||||| ||||||| |||||||    
T  20291400 acttttactataaatatagaccttgtattagagcaaattttgagatagagggagatgaaacaagggtttagaaaggcaaca 20291480  T

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Target: chr1; HSP #74
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 398
Target Start/End: Complemental strand, 13112093 - 13112046
Alignment:
Q  351 tattttgtgctgaaaatatatttatggacaataaatatatttttgtac 398  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||    
T  13112093 tattttatgctgaaaatatattcatggacaataaatatatttttgtac 13112046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 509 - 608
Target Start/End: Complemental strand, 14098327 - 14098229
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaac 608  Q
    ||||||||||| | ||| ||||||| ||||||||||||||||||  |||| | ||||| |||||||||||||| ||||||||| | |||| || ||||||    
T  14098327 gttccaaattt-taagtaatactttcactataaatatagaccttgtatcaaactaaactttgagatagaggggactgaaacaatggtttaaaaaggcaac 14098229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 530 - 609
Target Start/End: Original strand, 18839531 - 18839610
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| ||  || |  ||||||| ||||||||||||||||||||||||| ||||||  |||||||    
T  18839531 cttttactataaatatagacattgtattattgtaaaccatgagatagagggggctgaaacaagggtttagataggcaaca 18839610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 528 - 609
Target Start/End: Original strand, 6756469 - 6756550
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||| |||||||||||||| ||  ||| | ||||||||||| ||||||||| |||||||||||  |||||| |||||||    
T  6756469 tacttttgctataaatatagacattgtatcggtgtaaaccttgaaatagaggggactgaaacaagggcttagaaaggcaaca 6756550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 276 - 317
Target Start/End: Complemental strand, 6997429 - 6997388
Alignment:
Q  276 agtgttgtagtatgactcaaaatttgatggatggagaatatt 317  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  6997429 agtgttgtagtatgactcaaaatatgatggatggagaatatt 6997388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 509 - 601
Target Start/End: Complemental strand, 8349407 - 8349314
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcaga-gtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||| ||||||||  ||| ||||| |||||||||||| |||  || ||| | |||||||||||||||| |||||||||||||| |||||||    
T  8349407 gttccaattttatgagggataattttattataaatatagatcttgtattagatgcaaaccttgagatagagagggctgaaacaagggtttagaa 8349314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 13785835 - 13785786
Alignment:
Q  288 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaga 337  Q
    |||||||||| ||||||||||||||||||||| ||||||||||| |||||    
T  13785835 tgactcaaaaattgatggatggagaatattgtcgctaaaaatatgaaaga 13785786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 579
Target Start/End: Original strand, 16561373 - 16561461
Alignment:
Q  490 tatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagg 579  Q
    ||||||||| ||| ||| |||| ||||||||||||||||| |||  ||||||||||| |||||| ||||||  ||||||||||| |||||    
T  16561373 tatcttcagcgtgatatccgtttcaaatttatgagttata-tttctctataaatataaaccttatatcagatgaaaccttgagagagagg 16561461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 601
Target Start/End: Original strand, 28840619 - 28840695
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaacctt--gagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||||||||  ||||||| |||| ||  |||||| |||||| |||||||||| |||||||    
T  28840619 atacttttactataaatatagaccttgtatcagagcaaactttgagagatacagggggatgaaacaagggtttagaa 28840695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 509 - 581
Target Start/End: Original strand, 16431024 - 16431096
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggg 581  Q
    ||||||| ||||||||  |||||||||||||||||||||   ||  ||||||| |||||||||||||||||||    
T  16431024 gttccaattttatgagggatacttttactataaatataggttttgtatcagagcaaaccttgagatagagggg 16431096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 561 - 609
Target Start/End: Complemental strand, 31425325 - 31425277
Alignment:
Q  561 gtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||| ||||||||||||||||| ||||||| |||||||    
T  31425325 gtaaaccttgagataaagggggctgaaacaagggtttagaaaggcaaca 31425277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 562 - 601
Target Start/End: Complemental strand, 6115384 - 6115345
Alignment:
Q  562 taaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  6115384 taaaccttgagatagagggggctgaaacaagggtttagaa 6115345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 530 - 593
Target Start/End: Original strand, 17324009 - 17324072
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaagg 593  Q
    |||||| ||||||||||||| ||  || ||||||||||||||||||||| ||||| ||||||||    
T  17324009 cttttattataaatatagactttgtattagagtaaaccttgagatagagagggctaaaacaagg 17324072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 527 - 570
Target Start/End: Original strand, 43104100 - 43104143
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttg 570  Q
    ||||||||||||||||||||||||||  ||||||||||||||||    
T  43104100 atacttttactataaatatagaccttgtatcagagtaaaccttg 43104143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 529 - 601
Target Start/End: Original strand, 47177301 - 47177377
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||||||  |||| || |||| ||    |||||||||||||||||||||||| |||||||    
T  47177301 acttttactataaatatagaccttgtatcaaagcaaactttgagagagatagagggggctgaaacaagggtttagaa 47177377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 529 - 601
Target Start/End: Original strand, 47179652 - 47179728
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||||||  |||| || |||| ||    |||||||||||||||||||||||| |||||||    
T  47179652 acttttactataaatatagaccttgtatcaaagcaaactttgagagagatagagggggctgaaacaagggtttagaa 47179728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 527 - 606
Target Start/End: Complemental strand, 3579958 - 3579877
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagag--ggggctgaaacaaggatttagaatggca 606  Q
    ||||||||||| ||||||||||||||  ||||| |||||  |||||||||||  ||||||||||||||| || |||| ||||    
T  3579958 atacttttactttaaatatagaccttgtatcagcgtaaaatttgagatagagggggggctgaaacaagggttcagaaaggca 3579877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 530 - 607
Target Start/End: Complemental strand, 50307884 - 50307807
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaa 607  Q
    |||||||||||||||||  | ||  |||| |||||||||||||||| | |||||||||| |||| ||||||| |||||    
T  50307884 cttttactataaatataagctttgtatcaaagtaaaccttgagatatatggggctgaaaaaagggtttagaaaggcaa 50307807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 335
Target Start/End: Complemental strand, 11693753 - 11693706
Alignment:
Q  288 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaa 335  Q
    ||||||||||||||||||||| |||| ||| ||||||||| |||||||    
T  11693753 tgactcaaaatttgatggatgaagaagattattgctaaaattataaaa 11693706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 309
Target Start/End: Complemental strand, 21964397 - 21964366
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatgg 309  Q
    ||||||||||||||||||||||||||||||||    
T  21964397 tgttgtagtatgactcaaaatttgatggatgg 21964366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 530 - 601
Target Start/End: Complemental strand, 26613577 - 26613503
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaacctt--gagatagagggggctg-aaacaaggatttagaa 601  Q
    ||||| |||||||||||||||||  ||||||  |||||||  |||||||||||||||| |||||||| |||||||    
T  26613577 cttttgctataaatatagaccttgtatcagatgaaaccttgagagatagagggggctgaaaacaagggtttagaa 26613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 527 - 588
Target Start/End: Complemental strand, 15669731 - 15669669
Alignment:
Q  527 atacttttactataaatatagaccttaaatcaga-gtaaaccttgagatagagggggctgaaa 588  Q
    |||||||||||||||||| |||||||  | |||| |||||| ||| |||||||||||||||||    
T  15669731 atacttttactataaatacagaccttgtagcagatgtaaacattgggatagagggggctgaaa 15669669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 515 - 581
Target Start/End: Original strand, 40133864 - 40133930
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggg 581  Q
    ||||||||||  || |||||||||||||||||| | ||  ||||||||||| ||||||||| |||||    
T  40133864 aatttatgagggattcttttactataaatataggctttgtatcagagtaaatcttgagatatagggg 40133930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 593
Target Start/End: Complemental strand, 13125787 - 13125730
Alignment:
Q  536 ctataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaagg 593  Q
    ||||||||| | |||||  ||||||||||| ||||||| | |||||||||||||||||    
T  13125787 ctataaatagaaaccttgtatcagagtaaaacttgagagaaagggggctgaaacaagg 13125730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 10115466 - 10115506
Alignment:
Q  288 tgactcaaaatttgatggatggagaatattgttgctaaaaa 328  Q
    ||||||||||||||||||||  ||||||||||||| |||||    
T  10115466 tgactcaaaatttgatggattaagaatattgttgcaaaaaa 10115506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 218; Significance: 1e-119; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 277 - 609
Target Start/End: Original strand, 78882 - 79217
Alignment:
Q  277 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatg 376  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||| |||| ||||||||||||||    
T  78882 gtgttgtagtatgacttaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtctcaaatatattttctgctaaaaatatatttatg 78981  T
Q  377 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 476  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  78982 gataataaatatatttttgtactgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaag 79081  T
Q  477 gag---nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgaga 573  Q
    |||            |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||    
T  79082 gaggaaaaaaaaaatgtatcttcagtgtggtattcgttccaaatttatgagttatacctttactataaatatagaccttgaatcagagtaaaacttgaga 79181  T
Q  574 tagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||| |||||||| ||||||| |||||||    
T  79182 tagagggggctaaaacaagggtttagaaaggcaaca 79217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 213; Significance: 1e-116; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 276 - 601
Target Start/End: Complemental strand, 12196106 - 12195779
Alignment:
Q  276 agtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttat 375  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |||| |||| |||||||||||||||||||||    
T  12196106 agtgttgtagtatgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaatatatttat 12196007  T
Q  376 ggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaa 475  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  12196006 ggacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaa 12195907  T
Q  476 ggag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgaga 573  Q
    ||||           | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||| || |||| ||||||    
T  12195906 ggagaaaaaaaaaacgaatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaaagcaaactttgaga 12195807  T
Q  574 tagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||| |||||||    
T  12195806 tagagggggctgaaacaagggtttagaa 12195779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 2629479 - 2629141
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  2629479 tgttgtagtatgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 2629380  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  2629379 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 2629280  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagata 575  Q
    ||           ||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||  ||||   ||||| |||||| |    
T  2629279 aggaaaaaaaaacgtatcttcagtgtagtatttgttccaaatttattagttatacttttactataaatatagaccttgtatcatgttaaactttgagaga 2629180  T
Q  576 gag-----ggggctgaaacaaggatttagaatggcaaca 609  Q
    |||     ||||||||||||||| ||||||| |||||||    
T  2629179 gagatagaggggctgaaacaagggtttagaaaggcaaca 2629141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 286 - 609
Target Start/End: Original strand, 17852275 - 17852600
Alignment:
Q  286 tatgactcaaaatttgatggatggagaatattgt--tgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatggacaata 383  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||       ||||  |||||| ||||||||||||||||||||||||||    
T  17852275 tatgactcaaaatttgatg-atggagaatattgtgttgctaaaaatataaaagatttgtttcaaa--tattttatgctgaaaatatatttatggacaata 17852371  T
Q  384 aatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag---- 479  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||| |||        
T  17852372 aatatatttttgtaccttatgaagaactatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattatttcactgaaagagaaga 17852471  T
Q  480 nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagg 579  Q
             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  17852472 aaaaaaaaagtatcttc-gtgtggtattcgttccaaatttatgagttatacttttactataaatatagactttgaatcagagtaaaccttgagatagagg 17852570  T
Q  580 gggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||| ||||||||| |||||    
T  17852571 gggctgaaacaagggtttagaatgacaaca 17852600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 30035196 - 30034859
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||||| ||||||||||||| |    
T  30035196 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctaaaaatatatttatag 30035097  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||    
T  30035096 acaataaatatatttttgtatcgtatgaagaacgatttaatgcaaatatattttgaaagggaatattatatttttgatgcagatattctttcactgaagg 30034997  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 571  Q
    ||           ||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||    ||    
T  30034996 agaaaataaaaacgtatcttcaatgtgatatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttaagaga 30034897  T
Q  572 gatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||| ||| |||||||| ||||||| |||||||    
T  30034896 gatagagggagctaaaacaagggtttagaaaggcaaca 30034859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 278 - 601
Target Start/End: Original strand, 30966923 - 30967251
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  30966923 tgttgtagtatgactccaaatttgatggatggagaatattgttgctaaaaatataaaagatttatttcaaatatattttgtgctgaaaatatatttatgg 30967022  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||    
T  30967023 acaataaatatatttttgtattgtatgaagaacgatttaatgcaaatatattttgaaagcgaatattatatttttgatgcaaatattctttcactgaagg 30967122  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 571  Q
    ||           | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  || ||  ||||| ||    ||    
T  30967123 agaaaaaaaaaacgaatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtat-aggctaaactttgagaga 30967221  T
Q  572 gatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||||| |||||||    
T  30967222 gatagagggggctgaaacaagggtttagaa 30967251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 19705165 - 19704825
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  19705165 tgttgtagtatgactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaagatattttgtgctgaaaatatatttatgg 19705066  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  19705065 acaataaatatatttttgtatcgtatgaaggacgatttgatgcaaatatattttgaaagggaatattatattttttatgcaaatattctttcactgaagg 19704966  T
Q  478 ag----nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt---- 569  Q
    ||             ||||||| |||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||  ||||||| |||| ||        
T  19704965 agaaaaaaaagaaacgtatcttaagtgtgatattcgttccaaatttatgagttata-tttcactataaatatagaccttgtatcagagcaaactttgaga 19704867  T
Q  570 --gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
      ||||| |||||||||||||||||| ||||||| |||||||    
T  19704866 gagagatggagggggctgaaacaagggtttagaaaggcaaca 19704825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 278 - 552
Target Start/End: Original strand, 18317751 - 18318027
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  18317751 tgttgtagtatgactcaaaatttgaaggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 18317850  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  18317851 acaataaatatatttttgtatcgtatgaaggaagatttgatgcaaatatattttgaaagggaatattatattttttatgcaaatattctttcactgaagg 18317950  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacctt 552  Q
    ||           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18317951 agaaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatactttcactataaatatagacctt 18318027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 278 - 552
Target Start/End: Complemental strand, 26933158 - 26932883
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |||| |||| |||||||||||||||  ||||||    
T  26933158 tgttgtagtatgactcaaaaattgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatatattgtgctgaaaatattattatgg 26933059  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  26933058 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 26932959  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagacctt 552  Q
    ||          | ||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  26932958 agaaaaaaaaacgaatcttcagtgtggtatttgttccaaatttatgggttatactttcactataaatatagacctt 26932883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 276 - 479
Target Start/End: Complemental strand, 5275930 - 5275727
Alignment:
Q  276 agtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttat 375  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||    
T  5275930 agtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttatttcaaatatattttgtgctgaaaatatatttat 5275831  T
Q  376 ggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaa 475  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  5275830 ggacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaa 5275731  T
Q  476 ggag 479  Q
    ||||    
T  5275730 ggag 5275727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 280 - 587
Target Start/End: Original strand, 17011781 - 17012080
Alignment:
Q  280 ttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatggac 379  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||         ||   |||||||||  ||||||||||||||||||    
T  17011781 ttgtagtatgacttaaaatttgatggatgaagaatattattgctaaaaatataaaagtttgttttaaa---tattttgtgtagaaaatatatttatggac 17011877  T
Q  380 aataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag 479  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||  |     
T  17011878 aataaatatatttttgtaccgtatgatggacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaaaaa- 17011976  T
Q  480 nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagg 579  Q
             |||||||||| ||| | |||||||||||||||||||||||| |||  |||||||||||||||||  ||| |||||||||||||||||||||    
T  17011977 ---aaaaacgtatcttcagagtgatgttcgttccaaatttatgagttata-tttctctataaatatagaccttgtatcggagtaaaccttgagatagagg 17012072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 277 - 479
Target Start/End: Complemental strand, 22858537 - 22858343
Alignment:
Q  277 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatg 376  Q
    |||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||        ||| ||| |||||||||||||||||||||||    
T  22858537 gtgttgtagtatgactcaaaatttgatggatgaagaatattgttaataaaaatataaaagatttgttttaaatatactttgtgctgaaaatatatttatg 22858438  T
Q  377 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 476  Q
    ||||||||||||||||||||||||||||||  | |||| ||||||||||||||||||||||||||        |||||||||||||||||| || |||||    
T  22858437 gacaataaatatatttttgtaccgtatgaaagaagattagatgcaaatatattttgaaagggaat--------tttgatgcaaatattctttcattgaag 22858346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 280 - 444
Target Start/End: Original strand, 20526548 - 20526708
Alignment:
Q  280 ttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatggac 379  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||       |||| ||||||| |||||||||||||||||||       
T  20526548 ttgtagtatgactcaaaatttgatgggtgaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttatgctgaaaatatatttatg--- 20526644  T
Q  380 aataaatatatttttgtaccgtatgaagaacgatttgatgcaaatata-ttttgaaagggaatatt 444  Q
      || ||||||||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||    
T  20526645 --tacatatatttttgtaccgtatgaaggaagatttgatgcaaatatatttttgaaagagaatatt 20526708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 358 - 444
Target Start/End: Original strand, 30445318 - 30445404
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 444  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||| | ||||||||||||||||||||| ||| ||||||||    
T  30445318 tgctgaaaatatatttatgaacaataaatatatttttgtaccatatgaaggaagatttgatgcaaatatattttaaaaaggaatatt 30445404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 509 - 601
Target Start/End: Complemental strand, 15533036 - 15532945
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||| | ||||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||||||| |||||||    
T  15533036 gttccaaattt-taagttatacttttactataaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaa 15532945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 509 - 607
Target Start/End: Complemental strand, 15541495 - 15541398
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaa 607  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||||||| ||||||| |||||    
T  15541495 gttccaaattt-taagttacacttttactataaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaaaggcaa 15541398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 515 - 602
Target Start/End: Original strand, 15346355 - 15346442
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaat 602  Q
    ||||||||||  ||||||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||| ||||| ||||||||    
T  15346355 aatttatgagggatacttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaccaagggtttagaat 15346442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 24338783 - 24338704
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  24338783 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 24338704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 32447651 - 32447572
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  32447651 cttttactataaatataggctttgtatcagagtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 32447572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 515 - 609
Target Start/End: Original strand, 3390343 - 3390437
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||  ||||||||||||||||||||||| ||  |||||  |||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  3390343 aatttatgagagatacttttactataaatatagacattgtatcagtataaaccttgagatagacggggctgaaacaagggtttagaaaggcaaca 3390437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 530 - 607
Target Start/End: Original strand, 13057173 - 13057250
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaa 607  Q
    |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  13057173 cttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaa 13057250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 528 - 593
Target Start/End: Complemental strand, 30729165 - 30729100
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaagg 593  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||    
T  30729165 tacttttactataaatatagatcttgtatcagagtaaaccttgagatagagggggctgaaacaagg 30729100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 530 - 609
Target Start/End: Original strand, 25477253 - 25477332
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||| ||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  25477253 cttttactgtaaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 25477332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 1072215 - 1072133
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||| ||  |||||||||||| |||||||||| || |||||||||||| ||||||| |||||||    
T  1072215 atacttttactataaatatagacattgtatcagagtaaactttgagatagaaggagctgaaacaagggtttagaaaggcaaca 1072133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 14507513 - 14507431
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  || |||| |||| ||||||||||||||||| |||||||| ||||||| |||||||    
T  14507513 atacttttactataaatatagaccttgtattagagcaaactttgagatagagggggctaaaacaagggtttagaaaggcaaca 14507431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 15530460 - 15530378
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  ||||||||||||   |||||||||||||||||| |||||  ||||||||||||||    
T  15530460 atacttttactataaatatagaccttgtatcagagtaaactgggagatagagggggctgaagcaagggcttagaatggcaaca 15530378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 528 - 609
Target Start/End: Complemental strand, 28241658 - 28241577
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  28241658 tactttcactataaatatagaccttgtatcagagcaaacttagagatagagggggctgaaacaagggtttagaaaggcaaca 28241577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 530 - 601
Target Start/End: Complemental strand, 3234065 - 3233995
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||| ||  ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  3234065 cttttactataaatatagac-ttgtatcagtgtaaaccttaagatagagggggctgaaacaaggatttagaa 3233995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 8995455 - 8995537
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||| |||  ||||||||||||   ||||||||||||||| |||||||| ||||||| |||||||    
T  8995455 atacttttactataaatatagatcttgtatcagagtaaactgagagatagagggggctaaaacaagggtttagaaaggcaaca 8995537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 9019902 - 9019984
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||| |||  ||||||||||||   ||||||||||||||| |||||||| ||||||| |||||||    
T  9019902 atacttttactataaatatagatcttgtatcagagtaaactgagagatagagggggctaaaacaagggtttagaaaggcaaca 9019984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 532 - 609
Target Start/End: Complemental strand, 3632271 - 3632194
Alignment:
Q  532 tttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||| ||  ||||| |||||||||||||||||||| | |||||||||| ||||||| |||||||    
T  3632271 tttactataaatatagacattgtatcagtgtaaaccttgagatagagggagttgaaacaagggtttagaaaggcaaca 3632194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 11983365 - 11983285
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||| |  |||||| |||||||    
T  11983365 acttttactataaatatagaccttgtatcagagcaaacttggagatagagggggctgaaacaaaggcttagaaaggcaaca 11983285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 537 - 609
Target Start/End: Complemental strand, 14459093 - 14459021
Alignment:
Q  537 tataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||  ||||||| |||| ||||||||||||||||||||| |||| ||||||| |||||||    
T  14459093 tataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaataagggtttagaaaggcaaca 14459021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 19227744 - 19227664
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| |||  ||||||| |||| |||||||| |||||||| |||||||| ||||||| |||||||    
T  19227744 acttttactataaatatagatcttgtatcagagcaaactttgagataaagggggctcaaacaagggtttagaaaggcaaca 19227664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 530 - 593
Target Start/End: Original strand, 22490618 - 22490681
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaagg 593  Q
    ||||||| |||||||||||| || ||| || |||||||||||||||||||||||||||||||||    
T  22490618 cttttaccataaatatagacattgaattagtgtaaaccttgagatagagggggctgaaacaagg 22490681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 358 - 444
Target Start/End: Original strand, 30443111 - 30443195
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 444  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||| ||| | |||||||||||||| |||||| ||| | ||||||    
T  30443111 tgctgaaaatatatttatggacaa--aatatatgtttgtaccgtataaaggaagatttgatgcaaatgtatttttaaaagaaatatt 30443195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 528 - 609
Target Start/End: Complemental strand, 1230586 - 1230505
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||||||  |||| || |||| ||||||||||| ||| |||||||||| ||||||| |||||||    
T  1230586 tactttcactataaatatagaccttgtatcatagcaaactttgagatagagagggttgaaacaagggtttagaaaggcaaca 1230505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 530 - 607
Target Start/End: Original strand, 13039733 - 13039810
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaa 607  Q
    |||||||||||||||||||  ||  ||||| ||||||||||||||| ||| ||||||||||||| ||||||| |||||    
T  13039733 cttttactataaatatagatattgtatcagtgtaaaccttgagatataggaggctgaaacaagggtttagaaaggcaa 13039810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 3630199 - 3630120
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| ||  ||||  ||||| ||||||||||||||||||||||||  | ||||||| |||||||    
T  3630199 cttttactataaatatagacattgtatcaatgtaaaacttgagatagagggggctgaaacatcggtttagaaaggcaaca 3630120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 588
Target Start/End: Complemental strand, 3028188 - 3028127
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 588  Q
    ||||||||||||||||||||||||||  |||| |||||||| ||||||| | ||||||||||    
T  3028188 atacttttactataaatatagaccttgtatcaaagtaaaccatgagataaaaggggctgaaa 3028127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 528 - 601
Target Start/End: Complemental strand, 12186406 - 12186331
Alignment:
Q  528 tacttttactataaatatagaccttaaatcaga-gtaaaccttgagatagagggggctg-aaacaaggatttagaa 601  Q
    ||||||||||||||||||| |||||  |||| | ||||||||||||||||| ||||||| |||||||| |||||||    
T  12186406 tacttttactataaatataaaccttgtatcacatgtaaaccttgagatagaaggggctgaaaacaagggtttagaa 12186331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 515 - 593
Target Start/End: Original strand, 15367000 - 15367085
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcaga-------gtaaaccttgagatagagggggctgaaacaagg 593  Q
    ||||||||||  ||||||||||||||||||||||| ||  ||||||       ||||||||||||||||||||||||||| |||||    
T  15367000 aatttatgagggatacttttactataaatatagacattgtatcagacatcggtgtaaaccttgagatagagggggctgaaccaagg 15367085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 562 - 601
Target Start/End: Original strand, 15719665 - 15719704
Alignment:
Q  562 taaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  15719665 taaaccttgagatagagggggctgaaacaagggtttagaa 15719704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 570 - 609
Target Start/End: Original strand, 26065005 - 26065044
Alignment:
Q  570 gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  26065005 gagatagagggggctgaaacaagggtttagaatggcaaca 26065044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 570 - 609
Target Start/End: Original strand, 26084974 - 26085013
Alignment:
Q  570 gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  26084974 gagatagagggggctgaaacaagggtttagaatggcaaca 26085013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 32279973 - 32280054
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||| ||||| |||||||||||  |||| ||||||| | |||||||| ||||||||||||||| |||| || |||||||    
T  32279973 atacttttcctatatatatagaccttgtatcatagtaaacttggagataga-ggggctgaaacaagggtttaaaaaggcaaca 32280054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 530 - 611
Target Start/End: Original strand, 14466312 - 14466393
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaacagc 611  Q
    ||||||||||| |||||||| ||  || ||| ||||||||||||||||| ||| |||||||||  ||||||| | |||||||    
T  14466312 cttttactatagatatagactttgtattagaataaaccttgagatagagagggttgaaacaagagtttagaaagacaacagc 14466393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 537 - 609
Target Start/End: Complemental strand, 13870749 - 13870678
Alignment:
Q  537 tataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||| | ||  ||||||| ||||||||||||||| |||||||||| |||| ||||||| |||||||    
T  13870749 tataaatataggctttgtatcagagcaaaccttgagataga-ggggctgaaataagggtttagaaaggcaaca 13870678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 529 - 609
Target Start/End: Complemental strand, 20915694 - 20915612
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgaga----tagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||  |||||  ||||  ||||||    |||||||||||||||||||| ||||||| |||||||    
T  20915694 acttttactataaatatagaccttgtatcaggctaaa--ttgagagagatagagggggctgaaacaagggtttagaaaggcaaca 20915612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 570 - 609
Target Start/End: Complemental strand, 4816526 - 4816487
Alignment:
Q  570 gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  4816526 gagatagagggggctgaaacaagggtttagaaaggcaaca 4816487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 12158532 - 12158575
Alignment:
Q  292 tcaaaatttgatggatggagaatattgttgctaaaaatataaaa 335  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||    
T  12158532 tcaaaatttgatgaatgaagaagattgttgctaaaaatataaaa 12158575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 530 - 601
Target Start/End: Complemental strand, 12161889 - 12161819
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||| ||||||||||| ||  ||||  ||||||||||||||| | ||||||||||||||| |||||||    
T  12161889 cttttactttaaatatagacattgtatcattgtaaaccttgagata-aaggggctgaaacaagggtttagaa 12161819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 527 - 578
Target Start/End: Complemental strand, 25466508 - 25466457
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagag 578  Q
    |||||||||||||||||||||| |||   ||||||||||||||||| |||||    
T  25466508 atacttttactataaatatagatcttttgtcagagtaaaccttgaggtagag 25466457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 530 - 580
Target Start/End: Original strand, 10584105 - 10584155
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagaggg 580  Q
    ||||||||||||||||| || ||  ||||| ||||||||||||||||||||    
T  10584105 cttttactataaatataaacattgtatcagtgtaaaccttgagatagaggg 10584155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 549
Target Start/End: Complemental strand, 28038066 - 28038021
Alignment:
Q  504 tattcgttccaaatttatgagttatacttttactataaatatagac 549  Q
    |||| ||||||| ||||||||  |||||||||||||||||||||||    
T  28038066 tatttgttccaattttatgagggatacttttactataaatatagac 28038021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 515 - 601
Target Start/End: Original strand, 26945112 - 26945200
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatca-gagtaaaccttgagatagagggggctg-aaacaaggatttagaa 601  Q
    ||||||||||  || ||||||||||||||||| |||||  |||| |  |||||||||||||| ||||||| | |||||||| |||||||    
T  26945112 aatttatgaggaatgcttttactataaatataaaccttgtatcaggtataaaccttgagatatagggggccgaaaacaagggtttagaa 26945200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 30443022 - 30443069
Alignment:
Q  288 tgactcaaaattt--gatggatggagaatattgttgctaaaaatataa 333  Q
    |||||||||||||  |||||||| |||||||||||| |||||||||||    
T  30443022 tgactcaaaatttatgatggatgaagaatattgttgttaaaaatataa 30443069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 279 - 609
Target Start/End: Original strand, 41382420 - 41382752
Alignment:
Q  279 gttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgga 378  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||       | || ||||||| | |||||||||||||||||||    
T  41382420 gttgtagtatgactcaaaatttgatggatggagaatattgttgttaaaaatataaaagatttgtttcgaatatattttatactgaaaatatatttatgga 41382519  T
Q  379 caataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagga 478  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||||| ||    
T  41382520 caataaatatatttttgtaccgtatgaacaacgatttgatgcaaatatattttgaaaggaaatattatattttttatgcaaatattctttcactgaatga 41382619  T
Q  479 gnnnnnnnnn--gtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 576  Q
    |           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41382620 gaaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttgaatcagagtaaaccttgagatag 41382719  T
Q  577 agggggctgaaacaaggatttagaatggcaaca 609  Q
    | |||||| |||||||| ||||||||| |||||    
T  41382720 atggggctaaaacaagggtttagaatgacaaca 41382752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 41384493 - 41384823
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       | || ||||||| | ||||||||||||||||||    
T  41384493 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcgaatatattttatactgaaaatatatttatgg 41384592  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| || ||||||    
T  41384593 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatat-ttttatgcaaatattctttcattgaagg 41384691  T
Q  478 -agnnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatag 576  Q
     |          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||  |||||||||    
T  41384692 aaaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttgaatcaaagtaaaaattgagatag 41384791  T
Q  577 agggggctgaaacaaggatttagaatggcaaca 609  Q
    | ||||||||||||||| ||||||||| |||||    
T  41384792 a-ggggctgaaacaagggtttagaatgacaaca 41384823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 15808962 - 15809298
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||| |||||||||||||||||    
T  15808962 tgttttagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgttgaaaatatatttatgg 15809061  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  15809062 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatttttgatgcaaatattctttcactgaagg 15809161  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gag 572  Q
    ||          ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||    |||    
T  15809162 agaaaaaaaaacgtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 15809261  T
Q  573 atagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||| ||||||||||||||||| ||||||| |||||||    
T  15809262 ataaagggggctgaaacaagggtttagaaaggcaaca 15809298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 277 - 601
Target Start/End: Original strand, 43529870 - 43530199
Alignment:
Q  277 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatg 376  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||||||    
T  43529870 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 43529969  T
Q  377 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 476  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||    
T  43529970 gacaataaatatatttttgtattgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatattttttatgctaatattctttcactgaag 43530069  T
Q  477 gag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----ga 571  Q
    |||          |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||  ||||||| |||| ||    ||    
T  43530070 gagaaaaaaaaaagtatcttcagtgtggtatttattccaaatttatgagttatacttttactataaatatagaccttgtatcagagcaaactttgagaga 43530169  T
Q  572 gatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||||| |||||||    
T  43530170 gatagagggggctgaaacaagggtttagaa 43530199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 278 - 609
Target Start/End: Complemental strand, 28283813 - 28283475
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  28283813 tgttgtagtatgactcaaaatttgatggatggagaatatttttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 28283714  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||    
T  28283713 acaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaagtgaatattatatttttgatgcaaatattctttcactgaagg 28283614  T
Q  478 ag-nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt------g 570  Q
    ||          |||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||      |    
T  28283613 agaaaaaaaaacgtatcttcagtgtaatatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagag 28283514  T
Q  571 agatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  28283513 agatagagggggctgaaacaagggtttagaatggcaaca 28283475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 278 - 601
Target Start/End: Original strand, 3873750 - 3874081
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  3873750 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 3873849  T
Q  378 acaataaatatatttttgtaccgtatgaag-aacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaag 476  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||    
T  3873850 acaataaatatatttttgtatcgtatgaagaaacgatttgatgcaaatatattttgaaagagaatattatatttttgatgcaaatattctttcactgaag 3873949  T
Q  477 gag---nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt---- 569  Q
    |||             ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||  |||||  ||||| ||        
T  3873950 gagaaaaaaaaaaacatatcttcggtgtggtatttgttccaaatttatgagttatacttttactataaatatagactttgtatcaggctaaactttgaga 3874049  T
Q  570 gagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||| |||||||||||||||| |||||||    
T  3874050 gagatagcgggggctgaaacaagggtttagaa 3874081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 278 - 601
Target Start/End: Original strand, 608470 - 608805
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  608470 tgttgtagtatcactcaaaatttgatggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 608569  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||| |||||||||    
T  608570 acaataaatatatttttgtatcgtatgaaggacgatttgatgcaaatatattttgaaagagaatattatatattttatgcaaatattctttcactgaagg 608669  T
Q  478 ag-----nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt--- 569  Q
    ||              |||||||| ||||| |||| ||||||||||||||||||||| ||| ||| ||||||||||||||| |||| || |||| ||       
T  608670 agaaaaaaaaaagaacgtatcttcggtgtgatatttgttccaaatttatgagttata-tttcactgtaaatatagaccttatatcatagcaaactttgag 608768  T
Q  570 -----gagatagagggggctgaaacaaggatttagaa 601  Q
         |||||||||||||||||||||||| |||||||    
T  608769 agagagagatagagggggctgaaacaagggtttagaa 608805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 277 - 436
Target Start/End: Original strand, 32339093 - 32339252
Alignment:
Q  277 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatg 376  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||||||    
T  32339093 gtgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatg 32339192  T
Q  377 gacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaag 436  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32339193 gacaataaatatatttttgtatcgtatgaagaacgatttgatgcaaatatattttgaaag 32339252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 429 - 609
Target Start/End: Original strand, 181434 - 181616
Alignment:
Q  429 tttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggagnnnnnnnnn--gtatcttcagtgtggtattcgttccaaatttatgagtt 526  Q
    |||||||||||||||||||| |||||||||||||||||| |||| ||||||           ||||||||||||||||||||||||||||||||||||||    
T  181434 tttgaaagggaatattatatttttgatgcaaatattctttcactaaaggagaagaaaaaaacgtatcttcagtgtggtattcgttccaaatttatgagtt 181533  T
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  181534 atacttttactataaatatagactttgtatcagactaaactttgagatagagggggctgaaacaagggcttagaatggcaaca 181616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 278 - 395
Target Start/End: Complemental strand, 3265752 - 3265635
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  3265752 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 3265653  T
Q  378 acaataaatatatttttg 395  Q
    ||||||||||||| ||||    
T  3265652 acaataaatatatgtttg 3265635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 489 - 609
Target Start/End: Original strand, 32339264 - 32339388
Alignment:
Q  489 gtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggct 584  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||    |||||||||||||||    
T  32339264 gtatcttcagtgtggtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagatagagggggct 32339363  T
Q  585 gaaacaaggatttagaatggcaaca 609  Q
    ||||||||| ||||||| |||||||    
T  32339364 gaaacaagggtttagaaaggcaaca 32339388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 489 - 609
Target Start/End: Complemental strand, 24873563 - 24873437
Alignment:
Q  489 gtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaacctt------gagatagaggggg 582  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||      |||||||||||||    
T  24873563 gtatcttcagtgttgtatttgttccaaatttatgagttatacttttactataaatatagaccttgtatcaggctaaactttgagagagagatagaggggg 24873464  T
Q  583 ctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||| ||||||| |||||||    
T  24873463 ctgaaacaagggtttagaaaggcaaca 24873437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 515 - 609
Target Start/End: Complemental strand, 14419541 - 14419447
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||| ||||||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  14419541 aatttatgagtgatacttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 14419447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 515 - 609
Target Start/End: Complemental strand, 13858834 - 13858740
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||  ||||||||||||||||||||||| ||  |||||||||||||||||||||||||||| |||||||||| ||||||| |||||||    
T  13858834 aatttatgagggatacttttactataaatatagactttgtatcagagtaaaccttgagatagagggggatgaaacaagggtttagaaaggcaaca 13858740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 515 - 616
Target Start/End: Complemental strand, 35872728 - 35872627
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaacagctag 614  Q
    ||||||||||  || |||||||||||||||||||| ||  ||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||    
T  35872728 aatttatgagggatgcttttactataaatatagacattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaacaactag 35872629  T
Q  615 gg 616  Q
    ||    
T  35872628 gg 35872627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 4424015 - 4424097
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||| |||||||  ||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  4424015 atacttttactataaatacagaccttgtatcagagcaaactttgagatagagggggctgaaacaaggatttagaaaggcaaca 4424097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 14807748 - 14807830
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  14807748 atacttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 14807830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 15072707 - 15072789
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  15072707 atacttttactataaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 15072789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 44720842 - 44720922
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||| |||| || |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  44720842 acttttactataaatatagaccttatatcaaagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 44720922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 527 - 601
Target Start/End: Complemental strand, 2468436 - 2468362
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||||||||  |||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  2468436 atacttttactataaatatagaccttgtatcaaagtaaactttgagatagagggagctgaaacaaggatttagaa 2468362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 3886256 - 3886174
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||| ||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  3886256 atacttttactataaatatagactttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 3886174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 515 - 609
Target Start/End: Complemental strand, 5623088 - 5622994
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||| || ||||||||||||||||||   ||  |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||    
T  5623088 aatttatgagtgattcttttactataaatataggttttgtatcagaataaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 5622994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 28251905 - 28251823
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||| ||||||| ||||||||||| ||| |||||||||| |||||||||||||||    
T  28251905 atacttttactataaatatagaccttgtatcatagtaaactttgagatagagtgggttgaaacaagggtttagaatggcaaca 28251823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 528 - 609
Target Start/End: Original strand, 26775199 - 26775280
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| | ||  ||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  26775199 tacttttactataaatataggctttgtatcagagcaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 26775280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 27107232 - 27107153
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| ||  |||||  |||||||||||||||||||||||||||||||| ||||||| |||||||    
T  27107232 cttttactataaatatagacattgtatcagtataaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 27107153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 33541723 - 33541644
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| ||  ||||| |||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  33541723 cttttactataaatatagacattgtatcagtgtaaacattgagatagagggggctgaaacaagggtttagaaaggcaaca 33541644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 27826983 - 27827065
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||| ||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  27826983 atacttttactataaatataggccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 27827065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 27829294 - 27829376
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||| ||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  27829294 atacttttactataaatataggccttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 27829376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 528 - 601
Target Start/End: Original strand, 1225164 - 1225237
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||| | ||  ||||| ||||||||||||||||||||||||||||||||| |||||||    
T  1225164 tacttttactataaatataggcattgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 1225237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 509 - 601
Target Start/End: Complemental strand, 15186066 - 15185974
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||| ||||||||  |||||||||||||||||||| || ||  ||||||||||||||||||||| ||| | ||||||||||| |||||||    
T  15186066 gttccaattttatgagggatacttttactataaatataaactttgtatcagagtaaaccttgagataaaggtgactgaaacaagggtttagaa 15185974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 18810707 - 18810787
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| |||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  18810707 acttttactataaatatagatcttgtatcagagcaaacttggagatagagggggctgaaacaagggtttagaaaggcaaca 18810787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 358 - 444
Target Start/End: Complemental strand, 11701447 - 11701364
Alignment:
Q  358 tgctgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatatt 444  Q
    |||||||||||||||||||| || |||||||||||||||||||||||  ||| || |||||| ||||||||||| ||||||||||||    
T  11701447 tgctgaaaatatatttatggtcagtaaatatatttttgtaccgtatg--gaa-gaattgatgtaaatatatttttaaagggaatatt 11701364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 530 - 609
Target Start/End: Original strand, 14477276 - 14477355
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||| | ||  ||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||    
T  14477276 cttttactataaatataggctttgtatcagagcaaaccttgagatagagggggttgaaacaagggtttagaaaggcaaca 14477355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 530 - 609
Target Start/End: Original strand, 25952521 - 25952600
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||  | ||  ||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  25952521 cttttactataaatataagctttgtatcagaggaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 25952600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 509 - 584
Target Start/End: Original strand, 31162192 - 31162267
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggct 584  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||  |||| |||||||||||||| ||||||||||    
T  31162192 gttccaattttatgagggatacttttactataaatatagaccttgtatcatagtaaaccttgagaaagagggggct 31162267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 531 - 609
Target Start/End: Original strand, 36865538 - 36865617
Alignment:
Q  531 ttttactataaatatagaccttaaatcaga-gtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||| ||  |||||| ||||||||| ||||||||||||||||||||||| ||||||| |||||||    
T  36865538 ttttactataaatatagacattgtatcagatgtaaaccttaagatagagggggctgaaacaagggtttagaaaggcaaca 36865617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 515 - 609
Target Start/End: Complemental strand, 30480853 - 30480759
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||  || |||||||||||||||||||| ||  || || ||||||||||||||||| |||| |||||||||| ||||||| |||||||    
T  30480853 aatttatgagggatgcttttactataaatatagacattgtattagtgtaaaccttgagatagaaggggttgaaacaagggtttagaaaggcaaca 30480759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 18812892 - 18812972
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| |||  ||||||| |||| | |||||||||| ||||||||||||| ||||||| |||||||    
T  18812892 acttttactataaatatagatcttgtatcagagcaaacttggagatagaggaggctgaaacaagggtttagaaaggcaaca 18812972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 509 - 601
Target Start/End: Original strand, 27910994 - 27911086
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||| |||||| |  |||||||||| |||||||| ||| ||  ||||  ||||||||||||||||||||||||||||||||| |||||||    
T  27910994 gttccaattttatgggagatacttttacaataaatattgacattgtatcaatgtaaaccttgagatagagggggctgaaacaagggtttagaa 27911086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 509 - 601
Target Start/End: Original strand, 27957413 - 27957505
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||| |||||| |  |||||||||| |||||||| ||| ||  ||||  ||||||||||||||||||||||||||||||||| |||||||    
T  27957413 gttccaattttatgggagatacttttacaataaatattgacattgtatcaatgtaaaccttgagatagagggggctgaaacaagggtttagaa 27957505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 15067978 - 15068060
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| |||||  ||||   ||||| |||||||||| ||||||||||||||| ||||||| |||||||    
T  15067978 atacttttactataaatataaaccttgtatcaacctaaactttgagatagaaggggctgaaacaagggtttagaaaggcaaca 15068060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 12517364 - 12517280
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgaga--tagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||| ||||| |||||  ||||||| |||| ||||||  |||||||||||||||||||| ||||||| |||||||    
T  12517364 atacttttactatatatatataccttgtatcagagcaaactttgagagatagagggggctgaaacaagggtttagaaaggcaaca 12517280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 561 - 609
Target Start/End: Complemental strand, 37214514 - 37214466
Alignment:
Q  561 gtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  37214514 gtaaaccttgagatagagggggctgaaacaagggtttagaaaggcaaca 37214466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 530 - 609
Target Start/End: Complemental strand, 5372512 - 5372434
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||| ||||||| ||  ||||| ||||| ||||||||||| ||||||||||||||| ||||||| |||||||    
T  5372512 cttttactataattatagacattgtatcagtgtaaatcttgagataga-ggggctgaaacaagggtttagaaaggcaaca 5372434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 432
Target Start/End: Complemental strand, 13986285 - 13986214
Alignment:
Q  361 tgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttg 432  Q
    |||||||||||||||||| | | |||| |||||||||||| |||||  | ||||||||||||||||||||||    
T  13986285 tgaaaatatatttatggatagttaataaatttttgtaccgcatgaaagaagatttgatgcaaatatattttg 13986214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 530 - 601
Target Start/End: Original strand, 21482322 - 21482393
Alignment:
Q  530 cttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||  ||  |||||||||||| ||||||||||| || ||||||||||| |||||||    
T  21482322 cttttactataaatatagaatttgtatcagagtaaactttgagatagagtggactgaaacaagggtttagaa 21482393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 510 - 573
Target Start/End: Original strand, 6375969 - 6376032
Alignment:
Q  510 ttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgaga 573  Q
    |||||| |||||| |  ||||||||||||||||||||||||||  |||||||||||| ||||||    
T  6375969 ttccaattttatgcgggatacttttactataaatatagaccttgtatcagagtaaacattgaga 6376032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 558 - 601
Target Start/End: Original strand, 21480542 - 21480585
Alignment:
Q  558 agagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  21480542 agagtaaaccttgagatagatggggctgaaacaagggtttagaa 21480585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 13986374 - 13986328
Alignment:
Q  288 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaa 334  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||||||    
T  13986374 tgactcaaaattttatggatgaagaagattgttgctaaaaatataaa 13986328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 528 - 578
Target Start/End: Complemental strand, 14419834 - 14419784
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagag 578  Q
    ||||||| |||||||||||||| ||  ||||| ||||||||||||||||||    
T  14419834 tacttttgctataaatatagacattgtatcagggtaaaccttgagatagag 14419784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 601
Target Start/End: Complemental strand, 3005931 - 3005890
Alignment:
Q  561 gtaaaccttgagatagagggggct-gaaacaaggatttagaa 601  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  3005931 gtaaaccttgagatagagggggctggaaacaagggtttagaa 3005890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 30679256 - 30679208
Alignment:
Q  288 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaga 337  Q
    ||||||||||||||||||||| |||||| ||||| |||||||| ||||||    
T  30679256 tgactcaaaatttgatggatgaagaata-tgttggtaaaaataaaaaaga 30679208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 11701479 - 11701435
Alignment:
Q  288 tgactcaaaatttgatggatggagaatattgttgctaaaaatata 332  Q
    ||||||||||||||||||| | |||| ||||||||| ||||||||    
T  11701479 tgactcaaaatttgatggacgaagaagattgttgctgaaaatata 11701435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 174; Significance: 3e-93; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 278 - 609
Target Start/End: Original strand, 1735 - 2074
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||||||||    
T  1735 tgttgtagtatgactcaaaatttgaaggaagaagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgg 1834  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaagg 477  Q
    |||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  1835 acaataaatatatttttgtatcgtatgaaggaagatttgatgcaaatatattttgaaagggaatattatattttttatgcaaatattctttcactgaagg 1934  T
Q  478 ag--nnnnnnnnngtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttg----- 570  Q
    ||           ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||   ||| || |||| |||         
T  1935 agaaaaaaaaaacgtatcttcagtgtggtattcgttccaaatttataagttatactttcactataaatatagaccttgtttcatagcaaactttgagaga 2034  T
Q  571 -agatagagggggctgaaacaaggatttagaatggcaaca 609  Q
     ||||| ||||||||||||||||| ||||||| |||||||    
T  2035 aagatatagggggctgaaacaagggtttagaaaggcaaca 2074  T

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Target: scaffold0468 (Bit Score: 90; Significance: 3e-43; HSPs: 3)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 279 - 393
Target Start/End: Complemental strand, 2184 - 2070
Alignment:
Q  279 gttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgga 378  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||||||||    
T  2184 gttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatttatgga 2085  T
Q  379 caataaatatatttt 393  Q
    |||||||||||||||    
T  2084 caataaatatatttt 2070  T

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Target: scaffold0468; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 421 - 479
Target Start/End: Complemental strand, 2080 - 2022
Alignment:
Q  421 aaatatattttgaaagggaatattatatgtttgatgcaaatattcttccactgaaggag 479  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||    
T  2080 aaatatattttgaaagagaatattatatttttgatgcaaatattctttcactgaaggag 2022  T

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Target: scaffold0468; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 490 - 601
Target Start/End: Complemental strand, 2004 - 1895
Alignment:
Q  490 tatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcaga-gtaaaccttgagatagagggggctgaaa 588  Q
    ||||||||| ||| ||| | ||||||||||| |||||| | ||   || ||||||||||||||  |||||| |||||||| |||||||||| ||||||||    
T  2004 tatcttcagcgtgatatccattccaaatttacgagttacattt---ctctaaatatagaccttgtatcagatgtaaacctagagatagaggtggctgaaa 1908  T
Q  589 caaggatttagaa 601  Q
    ||||| |||||||    
T  1907 caagggtttagaa 1895  T

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Target: scaffold0133 (Bit Score: 88; Significance: 5e-42; HSPs: 2)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 278 - 426
Target Start/End: Original strand, 4546 - 4694
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatttatgg 377  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||       | || |||||| |||||||||||||||||||||    
T  4546 tgttgcagtataactcaaaatttgatggatgaagaatattgttgctaaaaatataaaagatttgtttcgaatatatttcgtgctgaaaatatatttatgg 4645  T
Q  378 acaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatat 426  Q
    |||||| |||||||||||||| |||||||| || |||||||||||||||    
T  4646 acaatatatatatttttgtactgtatgaaggacaatttgatgcaaatat 4694  T

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Target: scaffold0133; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 489 - 601
Target Start/End: Original strand, 4727 - 4839
Alignment:
Q  489 gtatcttcagtgtggtattcgttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctg-aa 587  Q
    |||||||||||||| |||||||| ||||||||||||||||| || | |||||||||||||||||  ||||||||||||||||||||||||||| ||| ||    
T  4727 gtatcttcagtgtgatattcgtttcaaatttatgagttatatttct-ctataaatatagaccttgtatcagagtaaaccttgagatagaggggtctgaaa 4825  T
Q  588 acaaggatttagaa 601  Q
    | ||||||||||||    
T  4826 aaaaggatttagaa 4839  T

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Target: scaffold1674 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 278 - 372
Target Start/End: Complemental strand, 95 - 1
Alignment:
Q  278 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagannnnnnncaaagatattttgtgctgaaaatatatt 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| |||||||||||||||||||||||    
T  95 tgttgtagtatgactcaaaatttgatggatggagaatattgttgctaaaaatataaaagatttgtttcaaatatattttgtgctgaaaatatatt 1  T

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Target: scaffold0339 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 3947 - 4029
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  3947 atacttttactataaatatagaccttgtatcagactaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 4029  T

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Target: scaffold0131 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 527 - 609
Target Start/End: Original strand, 14969 - 15051
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    ||||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||| ||||||||| |||||||    
T  14969 atacttttactataaatatagaccttgtatcagagcaaactttgagatagagggggctgaaacaatgatttagaaaggcaaca 15051  T

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Target: scaffold0250 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 529 - 609
Target Start/End: Original strand, 2832 - 2912
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||| |||  ||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||    
T  2832 acttttactataaatatagaacttgtatcagagcaaactttgagatagagggggctgaaacaagggtttagaaaggcaaca 2912  T

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Target: scaffold0224 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 509 - 601
Target Start/End: Complemental strand, 16174 - 16082
Alignment:
Q  509 gttccaaatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||  ||||||||||||||||||||||  ||  ||||||||||||||| |||||||||||| ||||| |||| |||||||    
T  16174 gttccaaatttatgagggatacttttactataaatatagattttgtatcagagtaaaccttaagatagagggggttgaaataagggtttagaa 16082  T

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Target: scaffold0008 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 361 - 431
Target Start/End: Complemental strand, 57905 - 57836
Alignment:
Q  361 tgaaaatatatttatggacaataaatatatttttgtaccgtatgaagaacgatttgatgcaaatatatttt 431  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  57905 tgaaaatatatgtatgaacaataaatatatttttgtaccgtatgaagaa-aatttgatgcaaatatatttt 57836  T

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Target: scaffold0552 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 528 - 609
Target Start/End: Complemental strand, 1168 - 1087
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||||||  ||||||| |||| |||||||||| ||||||||||||||| ||||||| |||||||    
T  1168 tactttcactataaatatagaccttgtatcagagcaaactttgagatagaaggggctgaaacaagggtttagaaaggcaaca 1087  T

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Target: scaffold0038 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 528 - 609
Target Start/End: Complemental strand, 41820 - 41739
Alignment:
Q  528 tacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||| ||||||||||||||||||  ||||||| |||| | |||||||||||||||||||||||| ||||||| |||||||    
T  41820 tactttcactataaatatagaccttgtatcagagcaaacttagagatagagggggctgaaacaagggtttagaaaggcaaca 41739  T

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Target: scaffold0472 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 529 - 601
Target Start/End: Original strand, 6151 - 6223
Alignment:
Q  529 acttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||||||||||||||||  |||| || |||| |||||||||||||||||||||||||| |||||||    
T  6151 acttttactataaatatagaccttgtatcaaagcaaactttgagatagagggggctgaaacaagggtttagaa 6223  T

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Target: scaffold0004 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 515 - 601
Target Start/End: Original strand, 79797 - 79883
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggatttagaa 601  Q
    ||||||||||  || ||||||||||||||||||   ||  ||||| ||||||||||||||||||||||||||||||||| |||||||    
T  79797 aatttatgagggattcttttactataaatatagtttttgtatcagtgtaaaccttgagatagagggggctgaaacaagggtttagaa 79883  T

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Target: scaffold0025 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 69633 - 69547
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaaccttgaga----tagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||| |||||||||||||||| ||||||| |||| ||||||    |||||||||||||||||||| ||||||| |||||||    
T  69633 atacttttacaataaatatagaccttatatcagagcaaactttgagagagatagagggggctgaaacaagggtttagaaaggcaaca 69547  T

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Target: scaffold0025; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 73365 - 73279
Alignment:
Q  527 atacttttactataaatatagaccttaaatcagagtaaacctt----gagatagagggggctgaaacaaggatttagaatggcaaca 609  Q
    |||||||||||||||||||||||| |  |||| || |||| ||    |||||||||||||||||||||||| ||||||| |||||||    
T  73365 atacttttactataaatatagaccgtgtatcaaaggaaactttgagagagatagagggggctgaaacaagggtttagaaaggcaaca 73279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 531 - 588
Target Start/End: Complemental strand, 16981 - 16924
Alignment:
Q  531 ttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaa 588  Q
    ||||| |||||||||| |||||  ||||||||||||||||||||||||| ||||||||    
T  16981 ttttaatataaatataaaccttgtatcagagtaaaccttgagatagaggaggctgaaa 16924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 515 - 598
Target Start/End: Original strand, 85169 - 85251
Alignment:
Q  515 aatttatgagttatacttttactataaatatagaccttaaatcagagtaaaccttgagatagagggggctgaaacaaggattta 598  Q
    ||||||||||  || |||||||||||||||||| | ||  |||| |||||||||||||||||| | ||  ||||||||||||||    
T  85169 aatttatgagggattcttttactataaatataggctttgtatcaaagtaaaccttgagatagaagagg-agaaacaaggattta 85251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0474 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 10443 - 10492
Alignment:
Q  288 tgactcaaaatttgatggatggagaatattgttgctaaaaatataaaaga 337  Q
    ||||||||||||||||||||  | || ||||||| |||||||||||||||    
T  10443 tgactcaaaatttgatggataaaaaagattgttgttaaaaatataaaaga 10492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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