View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0908_low_81 (Length: 323)
Name: NF0908_low_81
Description: NF0908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0908_low_81 |
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Alignment Details
Target: chr7 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 12211493 - 12211331
Alignment:
| Q |
25 |
ataaagtgtatttcttgtttatccaaaagcaatgagaagaaatttttgcgtcggtcctacacatgagaaccattctcatacataccaacaccatcatgag |
124 |
Q |
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| T |
12211493 |
ataaagtatgtttcttgtttatccaaaagcaatgagaagaagtttttacgtcggtcctacacatgagaaccattctcatacataccaacaccatcatgag |
12211394 |
T |
|
| Q |
125 |
agagacttggtcctgcacatgaacaacccatcctcatatatacaaacacaatcacaagagagac |
188 |
Q |
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| T |
12211393 |
agagacttggtcctgcacatgaacaa-ccatcctcatatatacaaacacaatcacaagagagac |
12211331 |
T |
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