View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0909_low_33 (Length: 240)

Name: NF0909_low_33
Description: NF0909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0909_low_33
NF0909_low_33
[»] chr4 (26 HSPs)
chr4 (25-229)||(19565879-19566083)
chr4 (36-229)||(12623214-12623407)
chr4 (25-230)||(46741086-46741291)
chr4 (25-194)||(40230193-40230362)
chr4 (25-194)||(33243290-33243459)
chr4 (25-197)||(44023596-44023768)
chr4 (25-149)||(33186789-33186913)
chr4 (25-141)||(12424342-12424458)
chr4 (100-195)||(18462986-18463080)
chr4 (1-110)||(16296734-16296844)
chr4 (116-230)||(26921469-26921584)
chr4 (86-195)||(14477579-14477688)
chr4 (3-95)||(35660753-35660845)
chr4 (86-230)||(2424347-2424492)
chr4 (86-176)||(45314097-45314188)
chr4 (94-200)||(13165089-13165194)
chr4 (100-143)||(20150787-20150830)
chr4 (116-194)||(9638987-9639066)
chr4 (1-69)||(14281114-14281182)
chr4 (3-71)||(14549515-14549583)
chr4 (86-149)||(14631082-14631145)
chr4 (116-230)||(16296915-16297029)
chr4 (1-71)||(19434778-19434848)
chr4 (86-194)||(25513798-25513907)
chr4 (86-230)||(26446154-26446299)
chr4 (1-69)||(54798024-54798092)
[»] chr8 (27 HSPs)
chr8 (25-227)||(22474643-22474845)
chr8 (1-190)||(12037164-12037353)
chr8 (25-230)||(17978376-17978581)
chr8 (25-190)||(21579206-21579371)
chr8 (43-191)||(41680132-41680280)
chr8 (25-175)||(29762883-29763033)
chr8 (65-218)||(36405104-36405257)
chr8 (25-149)||(22208155-22208279)
chr8 (43-141)||(22258356-22258454)
chr8 (86-228)||(4380579-4380722)
chr8 (100-200)||(20879435-20879534)
chr8 (166-230)||(22317871-22317935)
chr8 (100-143)||(22966772-22966815)
chr8 (160-230)||(22532092-22532162)
chr8 (160-230)||(22536777-22536847)
chr8 (86-228)||(21514638-21514781)
chr8 (116-230)||(36732372-36732487)
chr8 (167-222)||(42265477-42265532)
chr8 (129-195)||(20517031-20517097)
chr8 (1-95)||(22483643-22483737)
chr8 (100-141)||(21697509-21697550)
chr8 (160-230)||(5761555-5761625)
chr8 (86-149)||(18816337-18816400)
chr8 (1-69)||(26220416-26220484)
chr8 (1-69)||(26222469-26222537)
chr8 (160-212)||(6101731-6101783)
chr8 (170-214)||(24049432-24049476)
[»] scaffold0011 (1 HSPs)
scaffold0011 (25-230)||(33341-33546)
[»] chr1 (28 HSPs)
chr1 (25-230)||(14792523-14792728)
chr1 (25-228)||(44892336-44892539)
chr1 (25-229)||(18121490-18121694)
chr1 (25-228)||(38887049-38887252)
chr1 (25-190)||(41225454-41225619)
chr1 (25-190)||(41226707-41226872)
chr1 (1-176)||(21243772-21243926)
chr1 (1-87)||(17901905-17901991)
chr1 (1-110)||(8306467-8306577)
chr1 (1-87)||(21239146-21239232)
chr1 (160-229)||(24723312-24723381)
chr1 (92-193)||(39061275-39061375)
chr1 (1-95)||(6834029-6834126)
chr1 (170-230)||(51324536-51324596)
chr1 (80-195)||(11808186-11808288)
chr1 (100-143)||(40390112-40390155)
chr1 (94-195)||(21188029-21188129)
chr1 (94-230)||(24719471-24719606)
chr1 (3-87)||(35894964-35895048)
chr1 (1-71)||(7052132-7052202)
chr1 (86-149)||(28476776-28476839)
chr1 (107-149)||(22145708-22145750)
chr1 (1-71)||(24723579-24723649)
chr1 (116-149)||(8276031-8276064)
chr1 (116-149)||(38056714-38056747)
chr1 (116-149)||(50544849-50544882)
chr1 (170-214)||(22050326-22050370)
chr1 (170-214)||(29299063-29299107)
[»] scaffold0401 (1 HSPs)
scaffold0401 (26-230)||(8709-8913)
[»] chr5 (18 HSPs)
chr5 (25-227)||(14025770-14025972)
chr5 (25-230)||(8833166-8833371)
chr5 (25-191)||(26762289-26762455)
chr5 (25-190)||(8503888-8504053)
chr5 (25-229)||(26749919-26750122)
chr5 (85-227)||(1626881-1627023)
chr5 (1-200)||(21504002-21504201)
chr5 (86-211)||(18744821-18744947)
chr5 (100-143)||(24068191-24068234)
chr5 (133-195)||(21404080-21404142)
chr5 (116-210)||(6551270-6551365)
chr5 (1-71)||(36508862-36508932)
chr5 (1-69)||(18318322-18318390)
chr5 (86-149)||(23199249-23199312)
chr5 (125-179)||(21398807-21398862)
chr5 (198-228)||(660848-660878)
chr5 (170-214)||(18419483-18419527)
chr5 (1-69)||(20765367-20765435)
[»] scaffold0385 (1 HSPs)
scaffold0385 (25-230)||(232-437)
[»] scaffold0039 (1 HSPs)
scaffold0039 (25-228)||(9890-10093)
[»] chr6 (22 HSPs)
chr6 (25-230)||(22557135-22557339)
chr6 (25-229)||(18455034-18455238)
chr6 (25-230)||(23431400-23431612)
chr6 (1-194)||(25921864-25922057)
chr6 (43-230)||(7217204-7217390)
chr6 (25-197)||(32259732-32259904)
chr6 (25-191)||(31734594-31734760)
chr6 (36-149)||(23657986-23658099)
chr6 (86-200)||(1818900-1819014)
chr6 (1-214)||(25601306-25601515)
chr6 (1-95)||(29045127-29045221)
chr6 (160-230)||(28948597-28948667)
chr6 (107-230)||(18982540-18982665)
chr6 (160-229)||(18585827-18585896)
chr6 (94-195)||(18459262-18459363)
chr6 (129-195)||(31166231-31166297)
chr6 (116-200)||(35057521-35057606)
chr6 (1-69)||(16447892-16447960)
chr6 (1-69)||(21119944-21120012)
chr6 (85-163)||(18982361-18982439)
chr6 (86-149)||(15998836-15998899)
chr6 (1-69)||(19102600-19102668)
[»] chr2 (20 HSPs)
chr2 (1-190)||(14179728-14179917)
chr2 (1-190)||(14183466-14183655)
chr2 (43-189)||(23968624-23968770)
chr2 (27-179)||(24717908-24718060)
chr2 (1-214)||(28652528-28652740)
chr2 (1-110)||(149585-149695)
chr2 (111-195)||(19647206-19647290)
chr2 (166-229)||(18388151-18388214)
chr2 (85-179)||(25584274-25584368)
chr2 (94-195)||(20005966-20006066)
chr2 (116-195)||(45535903-45535982)
chr2 (43-190)||(12626427-12626579)
chr2 (94-230)||(21315437-21315572)
chr2 (94-230)||(21335227-21335362)
chr2 (1-71)||(1383771-1383841)
chr2 (1-79)||(23801356-23801434)
chr2 (198-230)||(19201160-19201192)
chr2 (183-224)||(22260083-22260124)
chr2 (86-149)||(21369240-21369303)
chr2 (170-214)||(24918962-24919006)
[»] scaffold0439 (1 HSPs)
scaffold0439 (27-227)||(4310-4510)
[»] scaffold0063 (1 HSPs)
scaffold0063 (25-197)||(62605-62777)
[»] chr7 (26 HSPs)
chr7 (25-230)||(14317959-14318163)
chr7 (25-179)||(14160867-14161021)
chr7 (25-176)||(9743093-9743244)
chr7 (25-191)||(15119306-15119472)
chr7 (25-140)||(43276794-43276909)
chr7 (25-141)||(8513803-8513920)
chr7 (86-230)||(4690623-4690768)
chr7 (1-87)||(19282909-19282995)
chr7 (94-230)||(43745612-43745748)
chr7 (166-221)||(15095606-15095661)
chr7 (116-195)||(42565828-42565907)
chr7 (153-230)||(8135198-8135275)
chr7 (1-95)||(13315176-13315270)
chr7 (88-141)||(8488144-8488197)
chr7 (116-194)||(33060416-33060494)
chr7 (1-79)||(38295465-38295543)
chr7 (2-71)||(47975010-47975079)
chr7 (1-71)||(12754784-12754854)
chr7 (86-230)||(47095399-47095543)
chr7 (3-69)||(48274349-48274415)
chr7 (1-69)||(10063021-10063089)
chr7 (86-149)||(15575691-15575754)
chr7 (86-149)||(16186860-16186923)
chr7 (94-197)||(20252175-20252278)
chr7 (160-212)||(36704549-36704601)
chr7 (198-230)||(48212687-48212719)
[»] chr3 (27 HSPs)
chr3 (25-194)||(53646055-53646224)
chr3 (25-179)||(54330318-54330472)
chr3 (25-144)||(14152446-14152565)
chr3 (44-143)||(5215552-5215651)
chr3 (94-196)||(21845646-21845747)
chr3 (94-195)||(48631288-48631388)
chr3 (25-112)||(15566399-15566486)
chr3 (101-230)||(15566706-15566843)
chr3 (94-195)||(3160622-3160722)
chr3 (86-194)||(50350812-50350923)
chr3 (86-179)||(12155036-12155129)
chr3 (1-87)||(12917416-12917502)
chr3 (1-95)||(45803432-45803526)
chr3 (3-71)||(6805046-6805114)
chr3 (183-223)||(9510883-9510923)
chr3 (183-223)||(9518858-9518898)
chr3 (86-212)||(17208471-17208598)
chr3 (86-195)||(12150943-12151052)
chr3 (198-230)||(24548914-24548946)
chr3 (1-149)||(29907499-29907649)
chr3 (1-149)||(29948665-29948815)
chr3 (1-149)||(29997819-29997969)
chr3 (172-214)||(14442209-14442251)
chr3 (198-228)||(24547260-24547290)
chr3 (1-69)||(10551168-10551236)
chr3 (1-69)||(21619246-21619314)
chr3 (1-69)||(36167395-36167463)
[»] scaffold0048 (1 HSPs)
scaffold0048 (25-230)||(56863-57065)
[»] scaffold0371 (2 HSPs)
scaffold0371 (25-191)||(10445-10611)
scaffold0371 (128-191)||(3864-3927)
[»] scaffold0630 (1 HSPs)
scaffold0630 (25-230)||(8950-9154)
[»] scaffold0020 (1 HSPs)
scaffold0020 (38-179)||(174121-174262)
[»] scaffold0108 (1 HSPs)
scaffold0108 (25-230)||(6303-6510)
[»] scaffold0431 (1 HSPs)
scaffold0431 (25-141)||(5517-5633)
[»] scaffold0121 (1 HSPs)
scaffold0121 (32-138)||(20093-20199)
[»] scaffold1160 (1 HSPs)
scaffold1160 (25-137)||(571-683)
[»] scaffold1437 (1 HSPs)
scaffold1437 (25-163)||(321-459)
[»] scaffold0261 (1 HSPs)
scaffold0261 (95-230)||(6380-6514)
[»] scaffold0092 (1 HSPs)
scaffold0092 (8-195)||(38437-38624)
[»] scaffold0021 (3 HSPs)
scaffold0021 (26-106)||(169328-169408)
scaffold0021 (111-194)||(17078-17161)
scaffold0021 (111-194)||(26609-26692)
[»] scaffold0594 (1 HSPs)
scaffold0594 (1-87)||(2103-2189)
[»] scaffold0217 (1 HSPs)
scaffold0217 (111-195)||(28686-28770)
[»] scaffold0017 (2 HSPs)
scaffold0017 (116-229)||(26704-26818)
scaffold0017 (94-195)||(23570-23670)
[»] scaffold0337 (1 HSPs)
scaffold0337 (94-195)||(3161-3261)
[»] scaffold0058 (1 HSPs)
scaffold0058 (94-195)||(59651-59751)
[»] scaffold1939 (1 HSPs)
scaffold1939 (49-192)||(38-181)
[»] scaffold0007 (3 HSPs)
scaffold0007 (166-230)||(158782-158846)
scaffold0007 (3-228)||(16380-16609)
scaffold0007 (3-230)||(18660-18892)
[»] scaffold0676 (2 HSPs)
scaffold0676 (3-109)||(2679-2786)
scaffold0676 (116-149)||(2858-2891)
[»] scaffold0059 (1 HSPs)
scaffold0059 (129-230)||(49720-49822)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-87)||(66183-66268)
scaffold0004 (160-229)||(328249-328318)
[»] scaffold1256 (1 HSPs)
scaffold1256 (116-228)||(2162-2275)
[»] scaffold0516 (2 HSPs)
scaffold0516 (116-228)||(5267-5380)
scaffold0516 (171-228)||(5170-5227)
[»] scaffold0165 (2 HSPs)
scaffold0165 (94-194)||(31886-31985)
scaffold0165 (129-190)||(32039-32100)
[»] scaffold1102 (1 HSPs)
scaffold1102 (112-195)||(1946-2029)
[»] scaffold0116 (1 HSPs)
scaffold0116 (167-229)||(35425-35487)
[»] scaffold0394 (1 HSPs)
scaffold0394 (94-195)||(7509-7609)
[»] scaffold0139 (1 HSPs)
scaffold0139 (85-195)||(40156-40269)
[»] scaffold0145 (1 HSPs)
scaffold0145 (100-143)||(8086-8129)
[»] scaffold0125 (1 HSPs)
scaffold0125 (116-194)||(28528-28607)
[»] scaffold0120 (1 HSPs)
scaffold0120 (100-143)||(29273-29316)
[»] scaffold0056 (1 HSPs)
scaffold0056 (116-230)||(18252-18367)
[»] scaffold0148 (1 HSPs)
scaffold0148 (1-95)||(8704-8798)
[»] scaffold1800 (1 HSPs)
scaffold1800 (94-198)||(564-667)
[»] scaffold0230 (1 HSPs)
scaffold0230 (160-229)||(6646-6715)
[»] scaffold0213 (2 HSPs)
scaffold0213 (94-194)||(19163-19263)
scaffold0213 (94-138)||(19117-19160)
[»] scaffold0149 (1 HSPs)
scaffold0149 (2-71)||(21404-21473)
[»] scaffold0308 (1 HSPs)
scaffold0308 (167-230)||(13469-13532)
[»] scaffold0251 (1 HSPs)
scaffold0251 (166-229)||(20047-20110)
[»] scaffold0203 (1 HSPs)
scaffold0203 (86-194)||(17936-18045)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-71)||(21985-22055)
[»] scaffold1186 (1 HSPs)
scaffold1186 (86-149)||(1967-2030)
[»] scaffold0162 (1 HSPs)
scaffold0162 (86-141)||(23932-23987)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-69)||(117294-117362)
[»] scaffold0005 (1 HSPs)
scaffold0005 (86-149)||(186238-186301)
[»] scaffold0878 (1 HSPs)
scaffold0878 (86-144)||(3469-3527)
[»] scaffold0028 (1 HSPs)
scaffold0028 (166-228)||(3013-3076)
[»] scaffold0231 (1 HSPs)
scaffold0231 (116-149)||(17563-17596)
[»] scaffold0819 (1 HSPs)
scaffold0819 (60-96)||(5289-5325)
[»] scaffold0574 (1 HSPs)
scaffold0574 (170-214)||(7273-7317)
[»] scaffold0369 (1 HSPs)
scaffold0369 (86-141)||(15665-15720)
[»] scaffold0175 (1 HSPs)
scaffold0175 (166-230)||(8670-8733)
[»] scaffold0077 (1 HSPs)
scaffold0077 (160-212)||(5972-6024)


Alignment Details
Target: chr4 (Bit Score: 173; Significance: 4e-93; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 25 - 229
Target Start/End: Complemental strand, 19566083 - 19565879
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19566083 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 19565984  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctct 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||    
T  19565983 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtaccacccttaccttagattgattgatcgcaaggttctaccgctttctct 19565884  T
Q  225 tctct 229  Q
    |||||    
T  19565883 tctct 19565879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 36 - 229
Target Start/End: Original strand, 12623214 - 12623407
Alignment:
Q  36 aacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaacc 135  Q
    |||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12623214 aacctaattcatcgcattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaacc 12623313  T
Q  136 ctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttctct 229  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  12623314 ctttttcaggattacatacctatgattaaagaaggttagtcccacccttaccttagattgattgatcgcaaggttctaccgctttctcttctct 12623407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 25 - 230
Target Start/End: Original strand, 46741086 - 46741291
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  46741086 caccaattatcaacctaattcatcggattatccactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaaccaattaacaactac 46741185  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctct 224  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||   ||||||||| ||   |||||||||||||||||||||||||||    
T  46741186 aaggttaaaccctttttcaggattacatatttatgattaaagaaggttagtcccacacttaccttaggttagatgatcgcaaggttctaccgctttctct 46741285  T
Q  225 tctctg 230  Q
    ||||||    
T  46741286 tctctg 46741291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 40230193 - 40230362
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40230193 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 40230292  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagatt 194  Q
    || |||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||||||||||||    
T  40230293 aatgttaaaccctttttcaagattacatacttatgattaaagaaagttagtcccacccttaccttagatt 40230362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 25 - 194
Target Start/End: Complemental strand, 33243459 - 33243290
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33243459 caccaattatcaacctaattcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 33243360  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagatt 194  Q
    ||| ||||||||| ||||| |||||||||||||||||||||||| ||||||| || | ||||||||||||    
T  33243359 aagattaaaccctatttcaagattacatacttatgattaaagaatgttagtctcacccttaccttagatt 33243290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 197
Target Start/End: Complemental strand, 44023768 - 44023596
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  44023768 caccaattatcaacctaattcatcagattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctactaacaagtac 44023669  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgat 197  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| || | |||||||||||||||    
T  44023668 aaggttaaaccctttttcaagattacatacttatgattaaagaaggttagtcgcacccttaccttagattgat 44023596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 149
Target Start/End: Original strand, 33186789 - 33186913
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33186789 caccaattatcaacctaattcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaaccac 33186888  T
Q  125 aaggttaaaccctttttcaggatta 149  Q
    |||||||||||||||||||| ||||    
T  33186889 aaggttaaaccctttttcagaatta 33186913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 12424458 - 12424342
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12424458 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagttccaaaccctaattctacaacatcaaaacctattaacaactac 12424359  T
Q  125 aaggttaaacccttttt 141  Q
    || ||||||||||||||    
T  12424358 aaagttaaacccttttt 12424342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 100 - 195
Target Start/End: Original strand, 18462986 - 18463080
Alignment:
Q  100 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattg 195  Q
    ||||||||||| |||||||||||||||  |||||||||||||||| |||| ||||| ||||||||||||||||||||||| |||||||||||||||    
T  18462986 aacatcaaaac-tattaacaactacaaaattaaaccctttttcagaattatatactcatgattaaagaaggttagtcccacctttaccttagattg 18463080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16296734 - 16296844
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaa-ttctac 99  Q
    ||||||||||||| |||||||||||||||| ||||| | || |||||||||||| |||||||||| ||||| ||||||| ||||||||||||| |||||     
T  16296734 cctatgattattcaacaacctgaacaccaattattaccttaattcatcggattacctactctttcaacaatcaattttaatttcaaaccctaatttctat 16296833  T
Q  100 aacatcaaaac 110  Q
    |||||||||||    
T  16296834 aacatcaaaac 16296844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 230
Target Start/End: Complemental strand, 26921584 - 26921469
Alignment:
Q  116 aacaactacaag-gttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctac 214  Q
    |||||||||||  ||||||||||||||||| ||||||||||||||||||| |||||||||||| | | ||||||||| ||   ||||| ||||||| |||    
T  26921584 aacaactacaaatgttaaaccctttttcagaattacatacttatgattaatgaaggttagtcctacccttaccttaggttagatgatcacaaggttatac 26921485  T
Q  215 cgctttctcttctctg 230  Q
    ||||||||||||||||    
T  26921484 cgctttctcttctctg 26921469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 195
Target Start/End: Original strand, 14477579 - 14477688
Alignment:
Q  86 aaccctaa-ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaacttt 184  Q
    |||||||| ||||| ||||||||||| ||| ||| |||||||| | |||||||||||||| |||| ||||| ||||||||||||||||||| ||| | ||    
T  14477579 aaccctaacttctataacatcaaaac-tatcaacgactacaagatcaaaccctttttcagaattatatactcatgattaaagaaggttagtgccaccctt 14477677  T
Q  185 accttagattg 195  Q
    |||||||||||    
T  14477678 accttagattg 14477688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 35660753 - 35660845
Alignment:
Q  3 tatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt 95  Q
    ||||||||||| |||||||||||||||| ||||| | || |||||||||||| ||||||| || ||||| |||||||  ||||||||||||||    
T  35660753 tatgattattctacaacctgaacaccaattattaccttacttcatcggattacctactctctcaacaatcaattttaaattcaaaccctaatt 35660845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 230
Target Start/End: Complemental strand, 2424492 - 2424347
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccaactt 183  Q
    |||||||||| ||| ||||||||||| || ||||||||||||| |||||||||||||||  |||| | | ||||  |||| |||| ||||||| || | |    
T  2424492 aaccctaatttctataacatcaaaac-taataacaactacaagattaaaccctttttcaaaattatacaacttagaattagagaaagttagtctcaccct 2424394  T
Q  184 taccttagattgattgatcgcaaggttctaccgctttctcttctctg 230  Q
    |||||||| ||   |||||||||||||||| ||||||||||||||||    
T  2424393 taccttaggttagatgatcgcaaggttctaacgctttctcttctctg 2424347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 45314188 - 45314097
Alignment:
Q  86 aaccctaat-tctacaacatcaaaacctattaacaactacaag-gttaaaccctttttcaggattacatacttatgattaaagaaggttagtc 176  Q
    ||||||||| |||| ||||||||||| ||  |||||||||||  ||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  45314188 aaccctaatctctataacatcaaaac-taacaacaactacaaatgttaaaccctttttcagaattacatacttatgattaatgaaggttagtc 45314097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 200
Target Start/End: Original strand, 13165089 - 13165194
Alignment:
Q  94 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagat 193  Q
    ||||| ||||||||||| |||||||||||| ||  |||| ||||||||||  ||   ||||| ||||||||||||||||||||||| | |||||||||||    
T  13165089 ttctataacatcaaaac-tattaacaactataaaattaacccctttttcacaatcctatactcatgattaaagaaggttagtcccacccttaccttagat 13165187  T
Q  194 tgattga 200  Q
    || ||||    
T  13165188 tggttga 13165194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 20150787 - 20150830
Alignment:
Q  100 aacatcaaaacctattaacaactacaaggttaaaccctttttca 143  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  20150787 aacatcaaaacctattaacaactacaaggttaaatcctttttca 20150830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 9638987 - 9639066
Alignment:
Q  116 aacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccaactttaccttagatt 194  Q
    ||||||||||||||||||||||||||||| ||||||  ||| || |||| |||| | |||||||| | ||||||||||||    
T  9638987 aacaactacaaggttaaaccctttttcagaattacacaactcattattagagaaagctagtcccacccttaccttagatt 9639066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 14281114 - 14281182
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctaca 69  Q
    ||||||||||||| ||||| |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  14281114 cctatgattattctacaacatgaacaccacctattactttaattcatcagattatctactctttctaca 14281182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 14549515 - 14549583
Alignment:
Q  3 tatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaat 71  Q
    ||||||||||| |||||||||||||||| ||||| | || |||||| |||||  ||||||||| |||||    
T  14549515 tatgattattctacaacctgaacaccaattattaccttaattcatcagattacatactctttcaacaat 14549583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 14631082 - 14631145
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 149  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| ||||    
T  14631082 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 14631145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 230
Target Start/End: Original strand, 16296915 - 16297029
Alignment:
Q  116 aacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctac 214  Q
    ||||||||| ||||||||||||||||||| |||| |  ||| || |||| |||| | |||||||| | ||||||||||||||| || || | |  |||||    
T  16296915 aacaactaccaggttaaaccctttttcagaattatacaactcattattagagaaagctagtcccacccttaccttagattgatcga-cgaaggactctac 16297013  T
Q  215 cgctttctcttctctg 230  Q
    |||||||||| |||||    
T  16297014 cgctttctctcctctg 16297029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 19434848 - 19434778
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaat 71  Q
    ||||||||||||| |||||||||||||||| ||||    || |||||| ||||| |||||||||| |||||    
T  19434848 cctatgattattctacaacctgaacaccaattatttctttaattcatcagattacctactctttcaacaat 19434778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 25513798 - 25513907
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccaactt 183  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||| ||||||||||||||||| |||| |  ||| || |||| |||| | |||||||| | |    
T  25513798 aaccctaatttctataacatcaaaac-taacaacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcccaccat 25513896  T
Q  184 taccttagatt 194  Q
    |||||||||||    
T  25513897 taccttagatt 25513907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 230
Target Start/End: Original strand, 26446154 - 26446299
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccaactt 183  Q
    |||||||||| ||| ||||||||||| ||  |||||||||||| ||||||| |||||||| |||| | | |  || |||| |||| | |||||| | | |    
T  26446154 aaccctaatttctataacatcaaaac-taacaacaactacaagattaaaccatttttcagaattatacaacccattattagagaaagctagtcctaccct 26446252  T
Q  184 taccttagattgattgatcgcaaggttctaccgctttctcttctctg 230  Q
    ||| |||| ||   ||||||||||||||||||||| |||||||||||    
T  26446253 tactttaggttagatgatcgcaaggttctaccgctctctcttctctg 26446299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 54798092 - 54798024
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctaca 69  Q
    ||||||||||||| ||||  |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  54798092 cctatgattattctacaatatgaacaccacctattactttaattcatcagattatctactctttctaca 54798024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 171; Significance: 6e-92; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 25 - 227
Target Start/End: Original strand, 22474643 - 22474845
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22474643 caccaattatcaacctaattcatcagattatctactctttcgacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 22474742  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctct 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  22474743 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacccttaccttagattgattgatcgcaaggttctaccgctttctct 22474842  T
Q  225 tct 227  Q
    |||    
T  22474843 tct 22474845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 12037353 - 12037164
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctaca 100  Q
    ||||||||||||| ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  12037353 cctatgattattctacaacctaaacaccaattattaacctaattcatcggattatctactctttctacaatcaattttagtttcaaaccctgattctaca 12037254  T
Q  101 acatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttacctta 190  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||    
T  12037253 acatcaaaagctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaacaaggttagtcccacccttacctta 12037164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 25 - 230
Target Start/End: Complemental strand, 17978581 - 17978376
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| ||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17978581 caccaattatcaacctaattcatcggattatctgctctttctataatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 17978482  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctct 224  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| | ||||||||| ||   |||||||||||||||||||||||||||    
T  17978481 aaggttaaatcctttttcaggattacatacttatgattatagaagtttagtcccacccttaccttagtttagatgatcgcaaggttctaccgctttctct 17978382  T
Q  225 tctctg 230  Q
    ||||||    
T  17978381 tctctg 17978376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 25 - 190
Target Start/End: Complemental strand, 21579371 - 21579206
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  21579371 caccaattatcaacctaattcatcggattatctactctttctacaatcaattttagtttcgaaccctaattctacaacatcaaaacatattaacaactac 21579272  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttacctta 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||    
T  21579271 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcacacccttacctta 21579206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 43 - 191
Target Start/End: Complemental strand, 41680280 - 41680132
Alignment:
Q  43 ttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttc 142  Q
    ||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  41680280 ttcatcggattatctactccttctacagtcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttatc 41680181  T
Q  143 aggattacatacttatgattaaagaaggttagtcccaactttaccttag 191  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  41680180 aggattacatacttatgattaaagaaggttagtcccacctttaccttag 41680132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 25 - 175
Target Start/End: Complemental strand, 29763033 - 29762883
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| ||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  29763033 caccaattatcaacctaattcatcgcattatctactctttctacaatcaattttagtttcaaactctaattctacaacatcaaaacttattaacaactac 29762934  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagt 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29762933 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagt 29762883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 65 - 218
Target Start/End: Complemental strand, 36405257 - 36405104
Alignment:
Q  65 ctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaa 164  Q
    ||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  36405257 ctacaatcaattttagtttcaaaccataattctacgacatcaaaacctattaacaactacaaggttaaacccttttcagggattacatacttatgattaa 36405158  T
Q  165 agaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgct 218  Q
    |||| ||||||| || | ||||||||||||||||||||||||||||||| ||||    
T  36405157 agaaagttagtcacacccttaccttagattgattgatcgcaaggttctatcgct 36405104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 149
Target Start/End: Original strand, 22208155 - 22208279
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22208155 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 22208254  T
Q  125 aaggttaaaccctttttcaggatta 149  Q
    |||||||||||||||||||| ||||    
T  22208255 aaggttaaaccctttttcagaatta 22208279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 43 - 141
Target Start/End: Complemental strand, 22258454 - 22258356
Alignment:
Q  43 ttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaacccttttt 141  Q
    ||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  22258454 ttcatcggattatctactctttctacaatcagttttagtttcaaaacctaattctacaacatcaaaacctatcaacaactgcaaggttaaacccttttt 22258356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 228
Target Start/End: Complemental strand, 4380722 - 4380579
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccaactt 183  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| |||| | | ||||  |||| |||| |||||||||| | |    
T  4380722 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccaccct 4380624  T
Q  184 taccttagattgattgatcgcaaggttctaccgctttctcttctc 228  Q
    |||||||| ||   ||||||||||||||||| |||||||||||||    
T  4380623 taccttaggttagatgatcgcaaggttctacggctttctcttctc 4380579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 20879435 - 20879534
Alignment:
Q  100 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattg 199  Q
    |||||||||||| ||||| ||||||||| ||||||||||||| || |  | ||||||||||||||||||||||||||||| | ||||||||||||| |||    
T  20879435 aacatcaaaacc-attaataactacaagcttaaacccttttttagaaccatatacttatgattaaagaaggttagtcccacccttaccttagattggttg 20879533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 22317935 - 22317871
Alignment:
Q  166 gaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttctctg 230  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||    
T  22317935 gaaggttagtcccacccttaccttagattgattgatcgcaaggttctaccgctttctctcctctg 22317871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 22966772 - 22966815
Alignment:
Q  100 aacatcaaaacctattaacaactacaaggttaaaccctttttca 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  22966772 aacatcaaaacctattaacaactacaaggttaaaccctttttca 22966815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 22532162 - 22532092
Alignment:
Q  160 attaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttctctg 230  Q
    |||| |||| |||||||||| | |||||||||||||||||||||| |||||||| || |||||||||||||    
T  22532162 attagagaaagttagtcccacccttaccttagattgattgatcgcgaggttctatcgttttctcttctctg 22532092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 22536847 - 22536777
Alignment:
Q  160 attaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttctctg 230  Q
    |||| |||| |||||||||| | |||||||||||||||||||||| |||||||| || |||||||||||||    
T  22536847 attagagaaagttagtcccacccttaccttagattgattgatcgcgaggttctatcgttttctcttctctg 22536777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 228
Target Start/End: Original strand, 21514638 - 21514781
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccaactt 183  Q
    |||||||||| ||| ||||||||||| ||  |||||||||||||||||||||||||| || |||| | | || || |||| ||||   |||||||| | |    
T  21514638 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttaagaattatacaactcattattagagaaatctagtcccaccct 21514736  T
Q  184 taccttagattgattgatcgcaaggttctaccgctttctcttctc 228  Q
    |||||||  ||   |||||||||||||||||||||||||||||||    
T  21514737 taccttaagttagatgatcgcaaggttctaccgctttctcttctc 21514781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 230
Target Start/End: Complemental strand, 36732487 - 36732372
Alignment:
Q  116 aacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctac 214  Q
    ||||||||||||||||||| ||||||||| |||| | | |  || |||| |||| | ||||| || | ||||||||| ||   |||||||||||||||||    
T  36732487 aacaactacaaggttaaactctttttcagaattatacaacccattattagagaaagctagtcacacccttaccttaggttagatgatcgcaaggttctac 36732388  T
Q  215 cgctttctcttctctg 230  Q
    ||||||||||||||||    
T  36732387 cgctttctcttctctg 36732372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 222
Target Start/End: Complemental strand, 42265532 - 42265477
Alignment:
Q  167 aaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttct 222  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||| ||||||||||    
T  42265532 aaggttagtcccacccttaccttggattgattgatcgcaaggttccaccgctttct 42265477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 20517097 - 20517031
Alignment:
Q  129 ttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattg 195  Q
    ||||||| ||||  || |||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  20517097 ttaaaccattttctagaattatatacttatgattaaagaaggttagtcccacccttaccttagattg 20517031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 22483643 - 22483737
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt 95  Q
    |||||| |||||| |||||||||||| ||| | |||   || |||||| ||||| |||||||||| ||||| ||||||||||||||| |||||||    
T  22483643 cctatgtttattctacaacctgaacatcaattcttatgttaattcatcagattacctactctttcaacaataaattttagtttcaaaacctaatt 22483737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 21697550 - 21697509
Alignment:
Q  100 aacatcaaaacctattaacaactacaaggttaaacccttttt 141  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  21697550 aacatcaaaacctattaacaactacaatgttaaacccttttt 21697509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 5761555 - 5761625
Alignment:
Q  160 attaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttctctg 230  Q
    |||| |||| |||||||||| | ||||||||| ||   ||||||||||||||||||| |||||||||||||    
T  5761555 attagagaaagttagtcccacccttaccttaggttagatgatcgcaaggttctaccgttttctcttctctg 5761625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 18816400 - 18816337
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 149  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| ||||    
T  18816400 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 18816337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 26220416 - 26220484
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctaca 69  Q
    ||||||||||||| ||||| |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  26220416 cctatgattattctacaacatgaacaccacctattactttaattcatcagattatctactctttctaca 26220484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 26222537 - 26222469
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctaca 69  Q
    ||||||||||||| ||||| |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  26222537 cctatgattattctacaacatgaacaccacctattactttaattcatcagattatctactctttctaca 26222469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 6101783 - 6101731
Alignment:
Q  160 attaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttct 212  Q
    |||| |||| |||||||||| ||||||||||||||||| ||| | ||||||||    
T  6101783 attagagaaagttagtcccacctttaccttagattgatcgattgaaaggttct 6101731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 24049432 - 24049476
Alignment:
Q  170 gttagtcccaactttaccttagattgattgatcgcaaggttctac 214  Q
    |||||||||| | ||||||||||||||||||  ||||||||||||    
T  24049432 gttagtcccacccttaccttagattgattgacagcaaggttctac 24049476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 25 - 230
Target Start/End: Original strand, 33341 - 33546
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33341 caccaattatcaacctaattcatcggattatctactatttcaacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 33440  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctct 224  Q
    | | ||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  33441 acgtttaaaccctttttcaggattaaatacttatgattaaagaaggttagtcccacccttaccttagattgattgatcgcaaggttctaccgctttctct 33540  T
Q  225 tctctg 230  Q
    ||||||    
T  33541 tctctg 33546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 154; Significance: 8e-82; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 25 - 230
Target Start/End: Complemental strand, 14792728 - 14792523
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14792728 caccaattatcaacctaattcatcagattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcgaaacctattaacaactac 14792629  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctct 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||   |||||||||||||||||||||||||||    
T  14792628 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacccttaccttaggttagatgatcgcaaggttctaccgctttctct 14792529  T
Q  225 tctctg 230  Q
    ||||||    
T  14792528 tctctg 14792523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 25 - 228
Target Start/End: Original strand, 44892336 - 44892539
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44892336 caccaattatcaacctaattcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaatatcaaaacctattaacaactac 44892435  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctct 224  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| | ||| ||||| ||   |||||||||||||||||||||||||||    
T  44892436 aaggttaaatcctttttcaagattacatacttatgattaaagaaggttagtcccacccttaacttaggttagatgatcgcaaggttctaccgctttctct 44892535  T
Q  225 tctc 228  Q
    ||||    
T  44892536 tctc 44892539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 25 - 229
Target Start/End: Original strand, 18121490 - 18121694
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||||||||| ||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18121490 caccaattatcaacctaattcatcggattatctactctttttacgatcaattttagtttcaaaccttaattctacaacatcaaaacctattaacaactac 18121589  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctct 224  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||| ||   |||||||||||||||||||||||||||    
T  18121590 aaggttaaatcctttttcaggattacatacttatgattaaagaaggttaatcccacccttaccttaggttagatgatcgcaaggttctaccgctttctct 18121689  T
Q  225 tctct 229  Q
    |||||    
T  18121690 tctct 18121694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 25 - 228
Target Start/End: Complemental strand, 38887252 - 38887049
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||| | ||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38887252 caccaattatcaacctaattcatcagtttatctactctttctacgatcacttttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 38887153  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctct 224  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||  || | ||||||||| ||   ||||| |||| ||||||||||||||||    
T  38887152 aagattaaaccctttttcaggattacatacttatgattaaagaaggttagtttcacccttaccttaggttagatgatcacaagtttctaccgctttctct 38887053  T
Q  225 tctc 228  Q
    ||||    
T  38887052 tctc 38887049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 25 - 190
Target Start/End: Complemental strand, 41225619 - 41225454
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||| | ||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||||| |    
T  41225619 caccaattatcaaccaaattcatcggattatctactctttctacattcaattttagtttcaaaccctaactctacaacatcaaaacctattatcaactgc 41225520  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttacctta 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  41225519 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacccttacctta 41225454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 25 - 190
Target Start/End: Complemental strand, 41226872 - 41226707
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||| | ||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||||| |    
T  41226872 caccaattatcaaccaaattcatcggattatctactctttctacattcaattttagtttcaaaccctaactctacaacatcaaaacctattatcaactgc 41226773  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttacctta 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  41226772 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacccttacctta 41226707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 21243926 - 21243772
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctaca 100  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||       ||||         
T  21243926 cctatgattattctacaacctgaacaccaattattaacctaattcatcggattatctactctttctacaatcaattttagtttc-------aatt----- 21243839  T
Q  101 acatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtc 176  Q
             |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21243838 ---------cctattaacaactacaaggttaaaccctttttcaggattacatatttatgattaaagaaggttagtc 21243772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 17901991 - 17901905
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaa 87  Q
    ||||||||||||| |||||||||||||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  17901991 cctatgattattctacaacctgaacaccaattattaccttagttcatcggattatctactctttcaacaatcaattttagtttcaaa 17901905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 8306467 - 8306577
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaa-ttctac 99  Q
    ||||||||||||| |||| ||||||||||| ||||| | || |||||||||||| |||||||||| ||||| ||||||| ||||||||||||| |||||     
T  8306467 cctatgattattcaacaatctgaacaccaattattaccttaattcatcggattacctactctttcaacaatcaattttaatttcaaaccctaatttctat 8306566  T
Q  100 aacatcaaaac 110  Q
    |||||||||||    
T  8306567 aacatcaaaac 8306577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 21239232 - 21239146
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaa 87  Q
    ||||||||||||| |||| ||||||||||| ||||| | ||||||||||||||| |||||||||| ||||| |||||||||||||||    
T  21239232 cctatgattattctacaaactgaacaccaattattaccttagttcatcggattacctactctttcaacaatcaattttagtttcaaa 21239146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 24723381 - 24723312
Alignment:
Q  160 attaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttctct 229  Q
    |||| |||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  24723381 attagagaaagttagtcccacccttaccttagattgattgatcgcaaggttctaccgctttctcttctct 24723312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 193
Target Start/End: Original strand, 39061275 - 39061375
Alignment:
Q  92 aattctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttag 191  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||| |||||||| |||| ||||| ||||||| |||||||||||||||   |||||||||    
T  39061275 aattctataacatcaaaac-tatcaacaactacaaggttaaaccttttttcagaattatatactcatgattacagaaggttagtcccactcttaccttag 39061373  T
Q  192 at 193  Q
    ||    
T  39061374 at 39061375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 6834029 - 6834126
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcat---cggattatctactctttctacaattaattttagtttcaaaccctaatt 95  Q
    ||||||||||||| |||||||||||||||| ||||| | ||||||||   ||||||| |||||||||| ||||| ||||||||||||||| |||||||    
T  6834029 cctatgattattctacaacctgaacaccaattattaccttagttcatcatcggattacctactctttcaacaatcaattttagtttcaaaacctaatt 6834126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 51324536 - 51324596
Alignment:
Q  170 gttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttctctg 230  Q
    ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  51324536 gttagtctcacccttaccttagattgattgatcgcaaggttctaccgctttctcttctctg 51324596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 195
Target Start/End: Complemental strand, 11808288 - 11808186
Alignment:
Q  80 gtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtccca 179  Q
    |||||||| |||||||||  |||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||| ||    
T  11808288 gtttcaaatcctaattctgaaacatcaaaacctattaacaactacaaggttaa-------------attacatacttatgattaaagaaggttagtctca 11808202  T
Q  180 actttaccttagattg 195  Q
     | ||||||| |||||    
T  11808201 cccttaccttggattg 11808186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 40390112 - 40390155
Alignment:
Q  100 aacatcaaaacctattaacaactacaaggttaaaccctttttca 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  40390112 aacatcaaaacctattaacaactacaaggttaaaccctttttca 40390155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 195
Target Start/End: Complemental strand, 21188129 - 21188029
Alignment:
Q  94 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagat 193  Q
    ||||| ||||||||||| ||| |||||||||||  ||||| ||||| |||  |||| ||||| ||||||||| ||||||||||||| | |||||||||||    
T  21188129 ttctataacatcaaaac-tatcaacaactacaaaattaaatcctttctcaaaattatatactcatgattaaaaaaggttagtcccacccttaccttagat 21188031  T
Q  194 tg 195  Q
    ||    
T  21188030 tg 21188029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 230
Target Start/End: Complemental strand, 24719606 - 24719471
Alignment:
Q  94 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccaactttaccttaga 192  Q
    ||||| ||||||||||| || |||||||||||||||||||||||||||||| |||| |  ||  || |||| |||| | |||| ||| | ||||| |||     
T  24719606 ttctataacatcaaaac-taataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagt-ccacccttaccatagg 24719509  T
Q  193 ttgattgatcgcaaggttctaccgctttctcttctctg 230  Q
    ||   |||||||||||||||||||||||||||||||||    
T  24719508 ttagatgatcgcaaggttctaccgctttctcttctctg 24719471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 35894964 - 35895048
Alignment:
Q  3 tatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaa 87  Q
    |||||||||||||| ||||||||||||| ||||| | || |||||||||||| | | |||||| ||||| ||||||| |||||||    
T  35894964 tatgattattccaccacctgaacaccaattattaccttacttcatcggattaccaattctttcaacaatcaattttaatttcaaa 35895048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7052202 - 7052132
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaat 71  Q
    ||||||||||||  |||||||||||||||| ||||| | || |||||| ||||| |||||||||| |||||    
T  7052202 cctatgattattttacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaat 7052132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 28476839 - 28476776
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 149  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| ||||    
T  28476839 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 28476776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 149
Target Start/End: Complemental strand, 22145750 - 22145708
Alignment:
Q  107 aaacctattaacaactacaaggttaaaccctttttcaggatta 149  Q
    |||||||  ||||||||||||||||||||||||||||| ||||    
T  22145750 aaacctaacaacaactacaaggttaaaccctttttcagaatta 22145708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24723649 - 24723579
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaat 71  Q
    ||||||||||||| |||||||||||||||| ||||| | || ||||||  ||||  ||||||||| |||||    
T  24723649 cctatgattattctacaacctgaacaccaattattaccttaattcatcatattacatactctttcaacaat 24723579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 149
Target Start/End: Complemental strand, 8276064 - 8276031
Alignment:
Q  116 aacaactacaaggttaaaccctttttcaggatta 149  Q
    ||||||||||||||||||||||||||||| ||||    
T  8276064 aacaactacaaggttaaaccctttttcagaatta 8276031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 149
Target Start/End: Complemental strand, 38056747 - 38056714
Alignment:
Q  116 aacaactacaaggttaaaccctttttcaggatta 149  Q
    ||||||||||||||||||||||||||||| ||||    
T  38056747 aacaactacaaggttaaaccctttttcagaatta 38056714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 149
Target Start/End: Original strand, 50544849 - 50544882
Alignment:
Q  116 aacaactacaaggttaaaccctttttcaggatta 149  Q
    ||||||||||||||||||||||||||||| ||||    
T  50544849 aacaactacaaggttaaaccctttttcagaatta 50544882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 22050370 - 22050326
Alignment:
Q  170 gttagtcccaactttaccttagattgattgatcgcaaggttctac 214  Q
    |||||||||| | ||||||||||||||||||  ||||||||||||    
T  22050370 gttagtcccacccttaccttagattgattgacagcaaggttctac 22050326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 29299063 - 29299107
Alignment:
Q  170 gttagtcccaactttaccttagattgattgatcgcaaggttctac 214  Q
    |||||||||| | ||||||||||||||||||  ||||||||||||    
T  29299063 gttagtcccacccttaccttagattgattgacagcaaggttctac 29299107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 26 - 230
Target Start/End: Original strand, 8709 - 8913
Alignment:
Q  26 accaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactaca 125  Q
    ||||| ||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  8709 accaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaaccgattaacatctaca 8808  T
Q  126 aggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctctt 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||   ||||||||||||||||||||||||||||    
T  8809 aggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacccttaccttaggttagatgatcgcaaggttctaccgctttctctt 8908  T
Q  226 ctctg 230  Q
    |||||    
T  8909 ctctg 8913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 147; Significance: 1e-77; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 25 - 227
Target Start/End: Complemental strand, 14025972 - 14025770
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||||||||||||| || |||| |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  14025972 caccaattatcaacctaattcatcggattatctactctttctacgatcaattgtagtttcaaaccctaattatacaacatcaaaatctattaacaactac 14025873  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctct 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||   ||||||||||||||||||||||||| |    
T  14025872 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacccttaccttagattagatgatcgcaaggttctaccgctttcttt 14025773  T
Q  225 tct 227  Q
    |||    
T  14025772 tct 14025770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 25 - 230
Target Start/End: Complemental strand, 8833371 - 8833166
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8833371 caccaattatcaacctaattcatcagattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactat 8833272  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctct 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||| ||   ||||||||||||||||| |||||||||    
T  8833271 aaggttaaaccctttttcaggattacatacttatgattaaagaaggtcagtcccacccttaccctaggttagatgatcgcaaggttctacagctttctct 8833172  T
Q  225 tctctg 230  Q
    ||||||    
T  8833171 tctctg 8833166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 25 - 191
Target Start/End: Original strand, 26762289 - 26762455
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| ||||||| ||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26762289 caccaattatcaacctaattcatcgaattatttactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 26762388  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttag 191  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||    
T  26762389 aaggttaaaccctttttcaggattacataattatgattaaagaaggttagtcccacccttaccttag 26762455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 25 - 190
Target Start/End: Complemental strand, 8504053 - 8503888
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8504053 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 8503954  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttacctta 190  Q
    |||||||||| ||| ||||||||||||||||||||||| |||||||||||||||| | ||||||||    
T  8503953 aaggttaaactcttgttcaggattacatacttatgattgaagaaggttagtcccacccttacctta 8503888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 229
Target Start/End: Original strand, 26749919 - 26750122
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||||||||||||  || ||||||||||| || ||||||||||||||||||||||| |||||||||||||    
T  26749919 caccaattatcaacctaattcatcggattatctactctttctatgatcaattttagttttaa-ccctaattctacaacatcaaaacttattaacaactac 26750017  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctct 224  Q
    |||||||||||| |||||||||||| ||||||||||||||| |||||||||| || | ||||||||| ||   |||||||||||||||||||||||||||    
T  26750018 aaggttaaaccccttttcaggattatatacttatgattaaaaaaggttagtctcacccttaccttaggttagatgatcgcaaggttctaccgctttctct 26750117  T
Q  225 tctct 229  Q
    |||||    
T  26750118 tctct 26750122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 85 - 227
Target Start/End: Complemental strand, 1627023 - 1626881
Alignment:
Q  85 aaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaacttt 184  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||    
T  1627023 aaactctaattttacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcacaccctt 1626924  T
Q  185 accttagattgattgatcgcaaggttctaccgctttctcttct 227  Q
    ||||||| ||   | ||||||||||||||||||||||||||||    
T  1626923 accttaggttagataatcgcaaggttctaccgctttctcttct 1626881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 21504002 - 21504201
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt-ctac 99  Q
    ||||||||||||| |||||||||||| ||  | |||   || ||||| |||| | |||||||||| ||||| |||||     |  |||||||||| |||     
T  21504002 cctatgattattctacaacctgaacatcagttcttatgttaattcattggatcacctactctttcaacaatgaatttgcaaatttaaccctaatttctat 21504101  T
Q  100 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattg 199  Q
    ||||||||||| || ||||||||||||  |||||||||||||||| |  | ||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  21504102 aacatcaaaac-tactaacaactacaaacttaaaccctttttcagaaccatatacttatgattaaagaaggttagtcccacctttaccttagattggttg 21504200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 211
Target Start/End: Original strand, 18744821 - 18744947
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccaactt 183  Q
    |||||||||| ||| ||||||||||| || |||||||||||||||||||||||||||||| |||| |  ||  || |||| |||| |||||||||| | |    
T  18744821 aaccctaatttctataacatcaaaac-taataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagttagtcccaccct 18744919  T
Q  184 taccttagattgattgatcgcaaggttc 211  Q
    |||||||||||||| ||| | |||||||    
T  18744920 taccttagattgatcgattgaaaggttc 18744947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 24068191 - 24068234
Alignment:
Q  100 aacatcaaaacctattaacaactacaaggttaaaccctttttca 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  24068191 aacatcaaaacctattaacaactacaaggttaaaccctttttca 24068234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 21404080 - 21404142
Alignment:
Q  133 accctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattg 195  Q
    |||||||||||| |||| | ||| ||||||||||||||||||||||| | |||||||||||||    
T  21404080 accctttttcagaattatagactcatgattaaagaaggttagtcccatccttaccttagattg 21404142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 210
Target Start/End: Complemental strand, 6551365 - 6551270
Alignment:
Q  116 aacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggtt 210  Q
    ||||||||||||||||||||||||||||| |||| |  |||||  |||| |||| ||||||| || | ||||||||||||||| ||| | ||||||    
T  6551365 aacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtctcacccttaccttagattgatcgattgaaaggtt 6551270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 36508932 - 36508862
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaat 71  Q
    ||||||||||||| ||||||| |||||||| ||||| | || |||||| ||||| |||||||||| |||||    
T  36508932 cctatgattattctacaacctaaacaccaattattaccttaattcatcagattacctactctttcaacaat 36508862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 18318390 - 18318322
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctaca 69  Q
    ||||||||||||| ||||| |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  18318390 cctatgattattctacaacatgaacaccacctattactttaattcatcagattatctactctttctaca 18318322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 23199312 - 23199249
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 149  Q
    |||||||||| ||| ||||||||||| || ||||||||||||||||||||| |||||||| ||||    
T  23199312 aaccctaatttctataacatcaaaac-tactaacaactacaaggttaaaccatttttcagaatta 23199249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 21398862 - 21398807
Alignment:
Q  125 aaggttaaacccttttt-caggattacatacttatgattaaagaaggttagtccca 179  Q
    ||||||||||||||||| ||| |||| | ||| |||||||||||||||||||||||    
T  21398862 aaggttaaacccttttttcagaattatacactcatgattaaagaaggttagtccca 21398807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 660848 - 660878
Alignment:
Q  198 tgatcgcaaggttctaccgctttctcttctc 228  Q
    |||||||||||||||||||||||||||||||    
T  660848 tgatcgcaaggttctaccgctttctcttctc 660878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 18419483 - 18419527
Alignment:
Q  170 gttagtcccaactttaccttagattgattgatcgcaaggttctac 214  Q
    |||||||||| ||||||||||||||||||||  | ||||||||||    
T  18419483 gttagtcccacctttaccttagattgattgacagtaaggttctac 18419527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20765435 - 20765367
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctaca 69  Q
    ||||||||||||| ||| | |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  20765435 cctatgattattctacatcatgaacaccacttattactttaattcatcagattatctactctttctaca 20765367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 25 - 230
Target Start/End: Original strand, 232 - 437
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  232 caccaattatcaacctaattcatcggattatctactctttctactataaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 331  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctct 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| || || | ||||||||| ||   |||||||||||||||||||||||||||    
T  332 aaggttaaaccctttttcaggattacatacttatgattaaagaagattaatctcacccttaccttaggttagatgatcgcaaggttctaccgctttctct 431  T
Q  225 tctctg 230  Q
    | ||||    
T  432 tttctg 437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 25 - 228
Target Start/End: Complemental strand, 10093 - 9890
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  10093 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattagaaactac 9994  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctct 224  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||| ||   |||||||||||||||||||||||||||    
T  9993 aaggctaaaccctttttcagaattacatacttatgattaaagaaggttagtcccacccttaccttaggttagatgatcgcaaggttctaccgctttctct 9894  T
Q  225 tctc 228  Q
    ||||    
T  9893 tctc 9890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 1e-74; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 25 - 230
Target Start/End: Original strand, 22557135 - 22557339
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22557135 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaacccgaattctacaacatcaaaacctattaacaactac 22557234  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctct 224  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| | ||||||||| ||   ||||||||||||||||| |||||||||    
T  22557235 aaggttaaaccctttttcaggattacatacttatga-taaagaaggttactcccacccttaccttaggttagatgatcgcaaggttctactgctttctct 22557333  T
Q  225 tctctg 230  Q
    ||||||    
T  22557334 tctctg 22557339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 25 - 229
Target Start/End: Complemental strand, 18455238 - 18455034
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||||||||||||| || |||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  18455238 caccaattatcaacctaattcatcggattatctactctttctactatcaattctagtttcaaaccctaattctacaatatcaaaacctattaacaactac 18455139  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctct 224  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||| ||   ||||| |||||||||||||||||||||    
T  18455138 aaggttaaaacctttttcaggattacatacttatgattaaagaaggttactcccacccttaccttaggttagatgatcacaaggttctaccgctttctct 18455039  T
Q  225 tctct 229  Q
    |||||    
T  18455038 tctct 18455034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 25 - 230
Target Start/End: Complemental strand, 23431612 - 23431400
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23431612 caccaattatcaacctaattcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattagcaactac 23431513  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcg-------caaggttctaccgc 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||   ||||||       |||| |||||||||    
T  23431512 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacgcttaccttagattagatgatcggactctacaagattctaccgc 23431413  T
Q  218 tttctcttctctg 230  Q
    |||||||||||||    
T  23431412 tttctcttctctg 23431400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 25921864 - 25922057
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctaca 100  Q
    ||||||||||||| ||||||||||||||||  |||| | || |||||| |||||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  25921864 cctatgattattctacaacctgaacaccaatcattaccttaattcatcagattatttactctttctacaatcaattttagtttcaaaccttaattctaca 25921963  T
Q  101 acatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagatt 194  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| | ||||||||||||    
T  25921964 acatcaaaacctattaacaactacaaggttaaacccttttttaggattacatacttatgattaaataaggttagtcccacccttaccttagatt 25922057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 43 - 230
Target Start/End: Complemental strand, 7217390 - 7217204
Alignment:
Q  43 ttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttc 142  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7217390 ttcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaa-cctattaacaactacaaggttaaaccctttttc 7217292  T
Q  143 aggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttctctg 230  Q
    |||||||||||||||||||||||||||||||||| || | |||||||||  |   |||||||||||||||||||||||||||| ||||    
T  7217291 aggattacatacttatgattaaagaaggttagtctcacccttaccttaggctagatgatcgcaaggttctaccgctttctcttttctg 7217204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 197
Target Start/End: Original strand, 32259732 - 32259904
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  32259732 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacttattaaaaactac 32259831  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgat 197  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| || | |||||| ||||||||    
T  32259832 aaggttaaactctttttcaggattacatacttatgattaaagaaggttagtcacacccttacctaagattgat 32259904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 25 - 191
Target Start/End: Original strand, 31734594 - 31734760
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||| | |||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  31734594 caccaattatcaaccaaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattttacaacatcaaaacctattaacaactgc 31734693  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttag 191  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||    
T  31734694 aaggttaaaccctttttcagaattacatacttatgattaaagaaggttagtcccacccttaccttag 31734760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 23657986 - 23658099
Alignment:
Q  36 aacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaacc 135  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23657986 aacctaattcatcggattatctactctttctacaatcaattttagtttcaaacccttattctacaacatcaaaacctattaacaactacaaggttaaacc 23658085  T
Q  136 ctttttcaggatta 149  Q
    ||||||||| ||||    
T  23658086 ctttttcagaatta 23658099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 1818900 - 1819014
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaacttt 184  Q
    |||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||||||| | || ||||| |||||||||||||||||||| || | ||    
T  1818900 aaccctaatttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctt 1818998  T
Q  185 accttagattgattga 200  Q
    ||||||||||| ||||    
T  1818999 accttagattggttga 1819014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 25601515 - 25601306
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt-ctac 99  Q
    ||||||||||||  ||||| |||||| ||| ||||| | || ||| | |||||| |||||||||  |||||||| || | | |  |||||||||| |||     
T  25601515 cctatgattattatacaacatgaacatcaattattaccttaattctttggattacctactcttttaacaattaaattcaatct--aaccctaatttctat 25601418  T
Q  100 aacatcaaaacctattaacaactacaa-ggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgatt 198  Q
    ||||| |||||    |||||||||||| |||||||||||||||||| ||||||| ||||||||||| ||||||||||| |  | |||||||||||||||     
T  25601417 aacatgaaaac----taacaactacaaaggttaaaccctttttcagaattacattcttatgattaatgaaggttagtctctcccttaccttagattgatc 25601322  T
Q  199 gatcgcaaggttctac 214  Q
    ||||| ||||||||||    
T  25601321 gatcgaaaggttctac 25601306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 29045127 - 29045221
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt 95  Q
    ||||||||||||| |||||||||||| ||| ||||| | ||||||||||||||| |||||||||| ||||| ||||||||||||||| |||||||    
T  29045127 cctatgattattctacaacctgaacatcaattattaccttagttcatcggattacctactctttcaacaatcaattttagtttcaaaacctaatt 29045221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 28948597 - 28948667
Alignment:
Q  160 attaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttctctg 230  Q
    |||| |||| ||||||| || | ||||||||||||||||||||||||||||||| |||||||| |||||||    
T  28948597 attagagaaagttagtctcacccttaccttagattgattgatcgcaaggttctatcgctttcttttctctg 28948667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 18982540 - 18982665
Alignment:
Q  107 aaacctattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgca 205  Q
    |||||||  ||||||||||||||||||||||||||||| |||| |  ||  || |||| | || |||| ||||| | |||||||||||||||||||  ||    
T  18982540 aaacctagcaacaactacaaggttaaaccctttttcagaattatacaacccattattagataaagttaatcccaccgttaccttagattgattgattaca 18982639  T
Q  206 aggttctac-cgctttctcttctctg 230  Q
    |||||||||  |||||||||||||||    
T  18982640 aggttctacaagctttctcttctctg 18982665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 18585827 - 18585896
Alignment:
Q  160 attaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttctct 229  Q
    |||| |||| |||||||||| | ||||| || |||||||||| ||||||||||||| |||||||||||||    
T  18585827 attagagaaagttagtcccacccttaccatatattgattgattgcaaggttctaccactttctcttctct 18585896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 195
Target Start/End: Original strand, 18459262 - 18459363
Alignment:
Q  94 ttctacaacatcaaaacctattaacaactacaaggttaaacccttttt-caggattacatacttatgattaaagaaggttagtcccaactttaccttaga 192  Q
    ||||| ||||||||||| | |||| ||||| ||  ||||||||||||| ||| || | ||||| |||||||||| |||||||||||| | ||||||||||    
T  18459262 ttctataacatcaaaac-tgttaaaaactataaaattaaacccttttttcagaatcatatactcatgattaaagtaggttagtcccacccttaccttaga 18459360  T
Q  193 ttg 195  Q
    |||    
T  18459361 ttg 18459363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 31166231 - 31166297
Alignment:
Q  129 ttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattg 195  Q
    |||||||||||||||| |||| | ||| ||||||||||| |||||||| || | |||||||||||||    
T  31166231 ttaaaccctttttcagaattatagactcatgattaaagatggttagtctcacccttaccttagattg 31166297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 35057521 - 35057606
Alignment:
Q  116 aacaactacaaggttaaaccctttttcaggattac-atacttatgattaaagaaggttagtcccaactttaccttagattgattga 200  Q
    |||||| |||| | ||||||| ||||||| ||||  | ||||||||||| ||||| ||||||||| | ||||||||||||||||||    
T  35057521 aacaacaacaatggtaaaccccttttcagaattatgaaacttatgattatagaagattagtcccaccattaccttagattgattga 35057606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 16447960 - 16447892
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctaca 69  Q
    ||||||||||||| ||||| |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  16447960 cctatgattattctacaacatgaacaccacctattactttaattcatcagattatctactctttctaca 16447892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 21120012 - 21119944
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctaca 69  Q
    ||||||||||||| ||||| |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  21120012 cctatgattattctacaacatgaacaccacctattactttaattcatcagattatctactctttctaca 21119944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 18982361 - 18982439
Alignment:
Q  85 aaaccctaa-ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgatta 163  Q
    ||||||||| ||||||| ||||||||| ||| |||||||||||  |||||||||||||||| |  | |||||||||||||    
T  18982361 aaaccctaacttctacagcatcaaaac-tatcaacaactacaaaattaaaccctttttcagaaccatatacttatgatta 18982439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 15998836 - 15998899
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 149  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||| ||||||||| ||||    
T  15998836 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaactctttttcagaatta 15998899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19102668 - 19102600
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctaca 69  Q
    ||||||||||||| ||||| |||||||||  |||||   || |||||| ||||||| ||||||||||||    
T  19102668 cctatgattattctacaacatgaacaccacctattactttaattcatcagattatccactctttctaca 19102600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 142; Significance: 1e-74; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 14179917 - 14179728
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctaca 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  14179917 cctatgattattccacaacctgaacaccaattattaacctagttcatcagattatctactctttctacaatcaattttagtttcaaaccctaattccaca 14179818  T
Q  101 acatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttacctta 190  Q
    ||||||||| |||||||||| || |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  14179817 acatcaaaatctattaacaagtataaggataaaccttttttcaggattacatactcatgattaaagaaggttagtcccacccttacctta 14179728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 14183655 - 14183466
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctaca 100  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||    
T  14183655 cctatgattattccacaacctgaacaccaattattaaactagttcatcggattatctaccctttctacaatcaattttagtttcaaaccctaattccaca 14183556  T
Q  101 acatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttacctta 190  Q
    |||||||||||||||||||| || |||| |||| | ||||||||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  14183555 acatcaaaacctattaacaagtataaggataaatcttttttcaggattacatactcatgattaaagaaggttagtcccacccttacctta 14183466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 43 - 189
Target Start/End: Complemental strand, 23968770 - 23968624
Alignment:
Q  43 ttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttc 142  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  23968770 ttcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacgactacaaggttaaaccttttttc 23968671  T
Q  143 aggattacatacttatgattaaagaaggttagtcccaactttacctt 189  Q
    |||||||||||||||||||||||||||||||||| || | |||||||    
T  23968670 aggattacatacttatgattaaagaaggttagtctcacccttacctt 23968624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 24717908 - 24718060
Alignment:
Q  27 ccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaa 126  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||| |||| |||||    
T  24717908 ccaattatcaacctaattcatcggattatctactctttctacaatcaattttagtttcaaacccgaattctgcaacatcaaaacctattgacaaatacaa 24718007  T
Q  127 ggttaaaccctttttcaggattacatacttatgattaaagaaggttagtccca 179  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  24718008 ggttaaaccccttttcaggattacatacttatgattaaagaatgttagtccca 24718060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 28652740 - 28652528
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt-ctac 99  Q
    ||||||||||||| || ||||||||| ||| ||||| | || ||||| |||||| |||||||||  |||||||| || | | |  |||||||||| |||     
T  28652740 cctatgattattctactacctgaacatcaattattaccttaattcattggattacctactcttttaacaattaaattcaatct--aaccctaatttctat 28652643  T
Q  100 aacatcaaaacctattaacaactacaa-ggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgatt 198  Q
    ||||||||||| ||  ||||||||||| || ||||||||||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||||     
T  28652642 aacatcaaaac-taacaacaactacaaaggctaaaccctttttcagaattacatacttatgattaatgaaggttagtcccacccttaccttagattgatc 28652544  T
Q  199 gatcgcaaggttctac 214  Q
    ||||| ||||||||||    
T  28652543 gatcgaaaggttctac 28652528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 149695 - 149585
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaa-ttctac 99  Q
    ||||||||||||| |||| ||||||||||| ||||| | || |||||||||||| |||||||||| ||||| ||||||| ||||||||||||| |||||     
T  149695 cctatgattattcaacaatctgaacaccaattattaccttaattcatcggattacctactctttcaacaatcaattttaatttcaaaccctaatttctat 149596  T
Q  100 aacatcaaaac 110  Q
    |||||||||||    
T  149595 aacatcaaaac 149585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 111 - 195
Target Start/End: Original strand, 19647206 - 19647290
Alignment:
Q  111 ctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattg 195  Q
    ||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||| || |  ||||||||||||    
T  19647206 ctattaacaactacaagattaaaccctttttcagaattatatacttatgattaaagaaggttagtctcacccataccttagattg 19647290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 18388214 - 18388151
Alignment:
Q  166 gaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttctct 229  Q
    ||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||    
T  18388214 gaaggttagtctcacccttaccttagattgattgatcgcaaggttctaccgctttctcttctct 18388151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 179
Target Start/End: Complemental strand, 25584368 - 25584274
Alignment:
Q  85 aaaccctaa-ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtccca 179  Q
    ||||||||| ||||| ||||||||||| ||| | |||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||    
T  25584368 aaaccctaacttctataacatcaaaac-tatcatcaacgacaaggttaaaccctttttcagaattatatactcatgattaaagaaggttattccca 25584274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 195
Target Start/End: Complemental strand, 20006066 - 20005966
Alignment:
Q  94 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagat 193  Q
    ||||| ||||||||||  |||||||||| ||||  |||||||||||||||| |||| | ||| |||||||||||||| |||||||| | |||||||||||    
T  20006066 ttctataacatcaaaat-tattaacaacaacaaaattaaaccctttttcagaattatagactcatgattaaagaaggctagtcccacccttaccttagat 20005968  T
Q  194 tg 195  Q
    ||    
T  20005967 tg 20005966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 195
Target Start/End: Original strand, 45535903 - 45535982
Alignment:
Q  116 aacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattg 195  Q
    |||||| ||||| |||||||||||||||| |||| | |||  |||||||||||||||||||||| | |||||||||||||    
T  45535903 aacaacaacaagattaaaccctttttcagaattatagactcgtgattaaagaaggttagtcccacccttaccttagattg 45535982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 190
Target Start/End: Complemental strand, 12626579 - 12626427
Alignment:
Q  43 ttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaaca-tcaaaa----cctattaacaactacaaggttaaaccct 137  Q
    |||||||||||| |||||||||| ||||| ||||||||||||||| |||||||   ||||| ||||||    |  |  ||||   || | ||||||||||    
T  12626579 ttcatcggattacctactctttcaacaatcaattttagtttcaaaacctaatttctcaacaatcaaaattaacaaaacaacacaaacgatgttaaaccct 12626480  T
Q  138 ttttcaggattacatacttatgattaaagaaggttagtcccaactttacctta 190  Q
    ||||||| |||| | |||||||||||| |||||||||||||| | ||||||||    
T  12626479 ttttcagaattatacacttatgattaatgaaggttagtcccacccttacctta 12626427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 230
Target Start/End: Complemental strand, 21315572 - 21315437
Alignment:
Q  94 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccaactttaccttaga 192  Q
    ||||| ||||||||||| || |||||||||||||||||||||||||||||| |||| |  ||  || |||| |||| | |||||||| | ||||||||||    
T  21315572 ttctataacatcaaaac-taataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttaga 21315474  T
Q  193 ttgattgatcgcaaggttctaccgctttctcttctctg 230  Q
    ||||| || || | |  ||||||||||||||| |||||    
T  21315473 ttgatcga-cgaaggactctaccgctttctctcctctg 21315437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 230
Target Start/End: Complemental strand, 21335362 - 21335227
Alignment:
Q  94 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccaactttaccttaga 192  Q
    ||||| ||||||||||| || |||||||||||||||||||||||||||||| |||| |  ||  || |||| |||| | |||||||| | ||||||||||    
T  21335362 ttctataacatcaaaac-taataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttaga 21335264  T
Q  193 ttgattgatcgcaaggttctaccgctttctcttctctg 230  Q
    ||||| || || | |  ||||||||||||||| |||||    
T  21335263 ttgatcga-cgaaggactctaccgctttctctcctctg 21335227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1383841 - 1383771
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaat 71  Q
    ||||||||||||| |||||||||| ||||| |||||   || |||||||||||| |||||||||| |||||    
T  1383841 cctatgattattctacaacctgaagaccaattattacgttaattcatcggattacctactctttcaacaat 1383771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 23801356 - 23801434
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaatttta 79  Q
    ||||| ||||||| |||||||||||||||  ||||| | || |||||||| ||| |||||||||| ||||| |||||||    
T  23801356 cctattattattctacaacctgaacaccagttattaccttaattcatcgggttacctactctttcaacaatcaatttta 23801434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 230
Target Start/End: Complemental strand, 19201192 - 19201160
Alignment:
Q  198 tgatcgcaaggttctaccgctttctcttctctg 230  Q
    |||||||||||||||||||||||||||||||||    
T  19201192 tgatcgcaaggttctaccgctttctcttctctg 19201160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 22260083 - 22260124
Alignment:
Q  183 ttaccttagattgattgatcgcaaggttctaccgctttctct 224  Q
    |||||||||||||||||||||||||  ||||||| |||||||    
T  22260083 ttaccttagattgattgatcgcaagactctaccgttttctct 22260124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 21369240 - 21369303
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 149  Q
    |||||||||| ||| ||||||||||| || ||  |||||||||||||||||||||||||| ||||    
T  21369240 aaccctaatttctataacatcaaaac-taatataaactacaaggttaaaccctttttcagaatta 21369303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 24918962 - 24919006
Alignment:
Q  170 gttagtcccaactttaccttagattgattgatcgcaaggttctac 214  Q
    |||||||||| | ||||||||||||||||||  ||||||||||||    
T  24918962 gttagtcccacccttaccttagattgattgacagcaaggttctac 24919006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 27 - 227
Target Start/End: Original strand, 4310 - 4510
Alignment:
Q  27 ccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaa 126  Q
    |||| ||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4310 ccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaa 4409  T
Q  127 ggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttc 226  Q
    ||||||||| |||||| |||||| ||||||||||||||||||||||||||||| | ||||||||| ||   ||||||||||||| |||||||||||||||    
T  4410 ggttaaaccttttttcgggattatatacttatgattaaagaaggttagtcccacccttaccttaggttagatgatcgcaaggttgtaccgctttctcttc 4509  T
Q  227 t 227  Q
    |    
T  4510 t 4510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 25 - 197
Target Start/End: Original strand, 62605 - 62777
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  62605 caccaattatcaacctaattcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaaccac 62704  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgat 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||    
T  62705 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtctcatccttaccttagattgat 62777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 3e-72; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 25 - 230
Target Start/End: Original strand, 14317959 - 14318163
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||| | |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  14317959 caccaattatcaaccaaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactgc 14318058  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctct 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||| || || | |  |||||||||||||||    
T  14318059 aaggttaaaccctttttcaggattacatacttatgattaaagaaggtttgtcccacccttaccttagattgatcga-cgaaggactctaccgctttctct 14318157  T
Q  225 tctctg 230  Q
    ||||||    
T  14318158 tctctg 14318163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 25 - 179
Target Start/End: Complemental strand, 14161021 - 14160867
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||||||| |||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14161021 caccaagtatcaacctaattcatcgaattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 14160922  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtccca 179  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14160921 aaggttaaaccccttttcaggattacatacttatgattaaagaaggttagtccca 14160867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 25 - 176
Target Start/End: Complemental strand, 9743244 - 9743093
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9743244 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacttattaacaactac 9743145  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtc 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9743144 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtc 9743093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 25 - 191
Target Start/End: Complemental strand, 15119472 - 15119306
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15119472 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaatctattaacaactac 15119373  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttag 191  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | | |||||||||    
T  15119372 aaggttaaaccctttttcaagattacatacttatgattaaagaaggttagtcctacccttaccttag 15119306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 43276909 - 43276794
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43276909 caccaattatcaacctaattcatcggattatttactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 43276810  T
Q  125 aaggttaaaccctttt 140  Q
    ||||||||||| ||||    
T  43276809 aaggttaaaccatttt 43276794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 8513920 - 8513803
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactcttt-ctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaacta 123  Q
    |||||| ||| |||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  8513920 caccaattatcaacctaattcttcggattatctactcttttctacaattagttttagtttcaaaccctaattctacagcatcaaaacctataaacaacta 8513821  T
Q  124 caaggttaaacccttttt 141  Q
    ||||||||||||||||||    
T  8513820 caaggttaaacccttttt 8513803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 230
Target Start/End: Complemental strand, 4690768 - 4690623
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccaactt 183  Q
    |||||||||| ||| ||||||||||  || |||||||||||||||||||||||||||||| |||| | | ||||  |||| |||| |||||||||| |||    
T  4690768 aaccctaatttctataacatcaaaag-taataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacctt 4690670  T
Q  184 taccttagattgattgatcgcaaggttctaccgctttctcttctctg 230  Q
    |||||||| ||   |||||||||||||||| ||||||||||||||||    
T  4690669 taccttaggttagatgatcgcaaggttctatcgctttctcttctctg 4690623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 19282909 - 19282995
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaa 87  Q
    ||||||||||||| |||||||||| ||||| ||||| | ||||||||||||||| |||||||||| ||||| ||||||| |||||||    
T  19282909 cctatgattattctacaacctgaagaccaattattaccttagttcatcggattacctactctttcaacaatcaattttaatttcaaa 19282995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 230
Target Start/End: Original strand, 43745612 - 43745748
Alignment:
Q  94 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccaactttaccttaga 192  Q
    ||||| ||||||||||| ||  ||||||||||||||||||||||||||||  |||| | | || || |||| |||| | |||||||| | |||||||||     
T  43745612 ttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtcccacccttaccttagg 43745710  T
Q  193 ttgattgatcgcaaggttctaccgctttctcttctctg 230  Q
    ||   |||||||||||||||||||||||||||||||||    
T  43745711 ttagatgatcgcaaggttctaccgctttctcttctctg 43745748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 15095661 - 15095606
Alignment:
Q  166 gaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttc 221  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  15095661 gaaggttagtcccacccttaccttagattgattgatcgcaaggttctaccgctttc 15095606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 195
Target Start/End: Complemental strand, 42565907 - 42565828
Alignment:
Q  116 aacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattg 195  Q
    |||||||||||| |||||||||||||||| |||| ||| ||||||||||||||| |||||| || | |||||||||||||    
T  42565907 aacaactacaagattaaaccctttttcagaattatatatttatgattaaagaagattagtctcacccttaccttagattg 42565828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 8135275 - 8135198
Alignment:
Q  153 acttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttctctg 230  Q
    ||||| |||||  ||||||||||| || | |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  8135275 acttaggattagtgaaggttagtctcacccttaccttagattgattgatcacaaggttctaccgctttatcttctctg 8135198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 13315270 - 13315176
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt 95  Q
    ||||||||||||| |||||||||||||||| ||||  | || ||||| || ||| |||||||||| ||||| ||||||| ||||||| |||||||    
T  13315270 cctatgattattctacaacctgaacaccaattatttccttaattcattgggttacctactctttcaacaatcaattttaatttcaaaacctaatt 13315176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 141
Target Start/End: Complemental strand, 8488197 - 8488144
Alignment:
Q  88 ccctaattctacaacatcaaaacctattaacaactacaaggttaaacccttttt 141  Q
    ||||||||||||| ||||||||||||| |||||||| |||||||||||||||||    
T  8488197 ccctaattctacagcatcaaaacctataaacaactataaggttaaacccttttt 8488144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 33060416 - 33060494
Alignment:
Q  116 aacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagatt 194  Q
    |||||| ||||  |||||||||||| ||| |||| | ||| ||||||||||||||||||||||| | ||||||||||||    
T  33060416 aacaacaacaaaattaaacccttttccagaattatagactcatgattaaagaaggttagtcccacccttaccttagatt 33060494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38295465 - 38295543
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaatttta 79  Q
    ||||||||||||| ||| |||||||||||| ||||| | || |||||||||||| |||||||| | ||||| |||||||    
T  38295465 cctatgattattctacatcctgaacaccaattattaccttacttcatcggattacctactcttgcaacaatcaatttta 38295543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 47975079 - 47975010
Alignment:
Q  2 ctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaat 71  Q
    |||||||||||| |||||||||||||||| ||||| | || |||||||||||| ||| |||||| |||||    
T  47975079 ctatgattattctacaacctgaacaccaattattaccttaattcatcggattacctaatctttcaacaat 47975010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 12754854 - 12754784
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaat 71  Q
    ||||||||||||| |||||||||||||||| |||||   || |||||| ||||| |||||||||| |||||    
T  12754854 cctatgattattctacaacctgaacaccaattattactttaattcatcagattacctactctttcaacaat 12754784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 230
Target Start/End: Original strand, 47095399 - 47095543
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta--catacttatgattaaagaaggttagtcccaact 182  Q
    |||||||||| ||| ||||||||| ||||  |||||||||||||||||||| |||||||| ||||  || ||  || |||| |||| | |||||||| |     
T  47095399 aaccctaatttctataacatcaaa-cctaacaacaactacaaggttaaaccatttttcagaattattca-acccattattagagaaagctagtcccaccc 47095496  T
Q  183 ttaccttagattgattgatcgcaaggttctaccgctttctcttctctg 230  Q
    |||||||||||||||||| || | |  ||||||||||||||| |||||    
T  47095497 ttaccttagattgattga-cgaaggactctaccgctttctctcctctg 47095543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 48274349 - 48274415
Alignment:
Q  3 tatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctaca 69  Q
    ||||||||||| ||||| |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  48274349 tatgattattctacaacatgaacaccacttattactttaattcatcagattatctactctttctaca 48274415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 10063089 - 10063021
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctaca 69  Q
    ||||||||||||| ||||| |||||||||  |||||   || ||||||  |||||||||||||||||||    
T  10063089 cctatgattattctacaacatgaacaccacctattactttaattcatcaaattatctactctttctaca 10063021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 15575754 - 15575691
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 149  Q
    |||||||||| ||| ||||||||||| ||  ||||| ||||||||||||||||||||||| ||||    
T  15575754 aaccctaatttctataacatcaaaac-taacaacaagtacaaggttaaaccctttttcagaatta 15575691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 16186860 - 16186923
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 149  Q
    |||||||||| ||| ||||||||||| || ||||||| | |||||||||||||||||||| ||||    
T  16186860 aaccctaatttctataacatcaaaac-tactaacaaccataaggttaaaccctttttcagaatta 16186923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 197
Target Start/End: Complemental strand, 20252278 - 20252175
Alignment:
Q  94 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccaactttaccttaga 192  Q
    ||||| ||||| ||||| || |||||||||||| ||||||||||||||||| |||| |  ||| || |||| |||| | |||||| | | ||||||||||    
T  20252278 ttctataacattaaaac-taataacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcctacccttaccttaga 20252180  T
Q  193 ttgat 197  Q
    |||||    
T  20252179 ttgat 20252175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 36704601 - 36704549
Alignment:
Q  160 attaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttct 212  Q
    |||||||||||||||||||| | |||||||||||| || ||||| ||| ||||    
T  36704601 attaaagaaggttagtcccacccttaccttagattaatcgatcgaaagcttct 36704549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 230
Target Start/End: Complemental strand, 48212719 - 48212687
Alignment:
Q  198 tgatcgcaaggttctaccgctttctcttctctg 230  Q
    |||||||||||||||||| ||||||||||||||    
T  48212719 tgatcgcaaggttctaccactttctcttctctg 48212687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 3e-72; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 25 - 194
Target Start/End: Complemental strand, 53646224 - 53646055
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53646224 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 53646125  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagatt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||    
T  53646124 aaggttaaaccctttttcaggattacatatttatgattaaagaaggttagtcccacccttaccttagatt 53646055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 25 - 179
Target Start/End: Complemental strand, 54330472 - 54330318
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54330472 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 54330373  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtccca 179  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  54330372 aaggttaaaccctttttcaggattacatacttatgattaaagaaagttagtccca 54330318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 14152565 - 14152446
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14152565 caccaattatcaacctaattcatcggattatctactctttatacaatcaattttagtttcaaaccctaattctacaacatcaaaacctactaacaactac 14152466  T
Q  125 aaggttaaaccctttttcag 144  Q
    ||||||||||||||||||||    
T  14152465 aaggttaaaccctttttcag 14152446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 44 - 143
Target Start/End: Original strand, 5215552 - 5215651
Alignment:
Q  44 tcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccctttttca 143  Q
    ||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5215552 tcatcggattatctactctatctacaatcaattttagttttaaaccctaattctacaacatcaaaacctattaataactacaaggttaaaccctttttca 5215651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 94 - 196
Target Start/End: Complemental strand, 21845747 - 21845646
Alignment:
Q  94 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagat 193  Q
    ||||| ||||||||||| |||||||||||||||| |||||||||||||||| | || ||||||||||||||||||||||||||||| | |||||||||||    
T  21845747 ttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatacttatgattaaagaaggttagtcccacccttaccttagat 21845649  T
Q  194 tga 196  Q
    |||    
T  21845648 tga 21845646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 94 - 195
Target Start/End: Original strand, 48631288 - 48631388
Alignment:
Q  94 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagat 193  Q
    ||||| ||||||||||| |||||||||||||||| |||||||||||||||| | || ||| ||||||||||||||||||||||||| | |||||||||||    
T  48631288 ttctataacatcaaaac-tattaacaactacaagcttaaaccctttttcagaactatatatttatgattaaagaaggttagtcccacccttaccttagat 48631386  T
Q  194 tg 195  Q
    ||    
T  48631387 tg 48631388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 15566399 - 15566486
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacct 112  Q
    |||||| ||| |||||| |||||| ||||||||||| ||||||| || ||||||||||| ||||||||||| ||| ||||||||||||    
T  15566399 caccaattatcaacctaattcatcagattatctactatttctacgatcaattttagttttaaaccctaattttaccacatcaaaacct 15566486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 230
Target Start/End: Original strand, 15566706 - 15566843
Alignment:
Q  101 acatcaaaacctattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccaactttaccttagattgattg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |  |||||  |||| |||| |||||||||| | |||| |||||||   ||    
T  15566706 acatcaaaacctattaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttactttagattacatg 15566805  T
Q  200 atcg-------caaggttctaccgctttctcttctctg 230  Q
    ||||       |||| ||||||||||||||||||||||    
T  15566806 atcggactcaacaagattctaccgctttctcttctctg 15566843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 195
Target Start/End: Complemental strand, 3160722 - 3160622
Alignment:
Q  94 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagat 193  Q
    ||||| || |||||||| ||| ||||||||||| ||||||||| |||| || |||| ||||| |||||||||||||||||||| || | |||||||||||    
T  3160722 ttctataatatcaaaac-tatcaacaactacaaagttaaacccatttttagaattatatactcatgattaaagaaggttagtctcacccttaccttagat 3160624  T
Q  194 tg 195  Q
    ||    
T  3160623 tg 3160622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 50350923 - 50350812
Alignment:
Q  86 aaccctaat-tctacaacatcaaaacctattaacaactacaa-ggttaaaccc--tttttcaggattacatacttatgattaaagaaggttagtcccaac 181  Q
    ||||||||| |||| ||||||||||| ||  || |||||||| ||||||||||  |||||||| |||| ||||| ||||||||||||||||||||||| |    
T  50350923 aaccctaatctctataacatcaaaac-taacaaaaactacaaaggttaaaccccttttttcagaattatatactcatgattaaagaaggttagtcccacc 50350825  T
Q  182 tttaccttagatt 194  Q
     ||||||||||||    
T  50350824 cttaccttagatt 50350812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 12155129 - 12155036
Alignment:
Q  86 aaccctaa-ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtccca 179  Q
    |||||||| ||||| ||||||||||| |||||||||||||||   |||| || ||||||| |  | |||||||||||||||||||||||||||||    
T  12155129 aaccctaacttctataacatcaaaac-tattaacaactacaatcctaaatcccttttcagaaccatatacttatgattaaagaaggttagtccca 12155036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 12917502 - 12917416
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaa 87  Q
    ||||||||||||  |||||||||||||||| ||||| | || |||||||||||| ||||| || | ||||| ||||||| |||||||    
T  12917502 cctatgattattttacaacctgaacaccaattattaccttacttcatcggattacctacttttccaacaatcaattttaatttcaaa 12917416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 45803526 - 45803432
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt 95  Q
    |||||| |||||| |||||||| ||| ||| | |||   || |||||||||||| |||||||||| ||||| ||||||||||||||| |||||||    
T  45803526 cctatgtttattctacaacctggacatcaattcttatgttaattcatcggattacctactctttcaacaatcaattttagtttcaaaacctaatt 45803432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 6805114 - 6805046
Alignment:
Q  3 tatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaat 71  Q
    ||||||||||| |||||||||||||||| ||||| | || |||||| ||||| |||||||||| |||||    
T  6805114 tatgattattctacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaat 6805046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 9510923 - 9510883
Alignment:
Q  183 ttaccttagattgattgatcgcaaggttctaccgctttctc 223  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  9510923 ttaccttagattgattgatcccaaggttctaccgctttctc 9510883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 9518898 - 9518858
Alignment:
Q  183 ttaccttagattgattgatcgcaaggttctaccgctttctc 223  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  9518898 ttaccttagattgattgatcccaaggttctaccgctttctc 9518858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 212
Target Start/End: Original strand, 17208471 - 17208598
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccaactt 183  Q
    |||||||||| ||| ||||||||||| ||  |||||||||||||||||| |||||||||| |||| |  ||| || |||| |||| | |||||||| | |    
T  17208471 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaatcctttttcagaattatacaactcattattagagaaagctagtcccaccct 17208569  T
Q  184 taccttagattgattgatcgcaaggttct 212  Q
    |||||||||||||| ||| | ||||||||    
T  17208570 taccttagattgatcgattgaaaggttct 17208598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 195
Target Start/End: Complemental strand, 12151052 - 12150943
Alignment:
Q  86 aaccctaa-ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaacttt 184  Q
    |||||||| ||||| ||||||||||| ||||||||| ||||||  |||| || |||||||    | ||||| |||||||||||||||||||||||   ||    
T  12151052 aaccctaacttctataacatcaaaac-tattaacaaatacaagcctaaatcccttttcagatacatatactaatgattaaagaaggttagtcccactctt 12150954  T
Q  185 accttagattg 195  Q
    |||||||||||    
T  12150953 accttagattg 12150943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 230
Target Start/End: Complemental strand, 24548946 - 24548914
Alignment:
Q  198 tgatcgcaaggttctaccgctttctcttctctg 230  Q
    |||||||||||||||||||||||||||||||||    
T  24548946 tgatcgcaaggttctaccgctttctcttctctg 24548914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 29907499 - 29907649
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaatt-aattttagtttcaaaccctaatt-cta 98  Q
    |||||| ||||||  ||||  |||||||||  | || |||| ||||||  |||| |||| ||||| |||||| ||||||| |||| |||||||||| ||     
T  29907499 cctatgtttattctgcaactcgaacaccaataaataccctaattcatcatattacctacactttcaacaattcaattttaatttctaaccctaatttctc 29907598  T
Q  99 caa-catcaaaacctattaacaactacaaggttaaaccctttttcaggatta 149  Q
     || ||||||| ||||  ||||||||||||||||||||||||||||| ||||    
T  29907599 taatcatcaaa-cctaacaacaactacaaggttaaaccctttttcagaatta 29907649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 29948665 - 29948815
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaatt-aattttagtttcaaaccctaatt-cta 98  Q
    |||||| ||||||  ||||  |||||||||  | || |||| ||||||  |||| |||| ||||| |||||| ||||||| |||| |||||||||| ||     
T  29948665 cctatgtttattctgcaactcgaacaccaataaataccctaattcatcatattacctacactttcaacaattcaattttaatttctaaccctaatttctc 29948764  T
Q  99 caa-catcaaaacctattaacaactacaaggttaaaccctttttcaggatta 149  Q
     || ||||||| ||||  ||||||||||||||||||||||||||||| ||||    
T  29948765 taatcatcaaa-cctaacaacaactacaaggttaaaccctttttcagaatta 29948815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 29997819 - 29997969
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaatt-aattttagtttcaaaccctaatt-cta 98  Q
    |||||| ||||||  ||||  |||||||||  | || |||| ||||||  |||| |||| ||||| |||||| ||||||| |||| |||||||||| ||     
T  29997819 cctatgtttattctgcaactcgaacaccaataaataccctaattcatcatattacctacactttcaacaattcaattttaatttctaaccctaatttctc 29997918  T
Q  99 caa-catcaaaacctattaacaactacaaggttaaaccctttttcaggatta 149  Q
     || ||||||| ||||  ||||||||||||||||||||||||||||| ||||    
T  29997919 taatcatcaaa-cctaacaacaactacaaggttaaaccctttttcagaatta 29997969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 14442209 - 14442251
Alignment:
Q  172 tagtcccaactttaccttagattgattgatcgcaaggttctac 214  Q
    |||||||| | ||||||||||||||||||||| ||||||||||    
T  14442209 tagtcccacccttaccttagattgattgatcgaaaggttctac 14442251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 24547260 - 24547290
Alignment:
Q  198 tgatcgcaaggttctaccgctttctcttctc 228  Q
    |||||||||||||||||||||||||||||||    
T  24547260 tgatcgcaaggttctaccgctttctcttctc 24547290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10551168 - 10551236
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctaca 69  Q
    ||||||||||||| ||||| |||||||||  |||||   || | |||| ||||||||||||||||||||    
T  10551168 cctatgattattctacaacatgaacaccacctattactttaatccatcagattatctactctttctaca 10551236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21619246 - 21619314
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctaca 69  Q
    ||||||||| ||| ||||| |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  21619246 cctatgattcttctacaacatgaacaccacctattactttaattcatctgattatctactctttctaca 21619314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 36167395 - 36167463
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctaca 69  Q
    ||||||||| ||| ||||| |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  36167395 cctatgattcttctacaacatgaacaccacctattactttaattcatcagattatctactctttctaca 36167463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 25 - 230
Target Start/End: Original strand, 56863 - 57065
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  56863 caccaattatcaacctaattcatcgaattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacatctac 56962  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctct 224  Q
    |||||||   ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||   ||||||| |||||||||| ||||||||    
T  56963 aaggtta---cctttttcaggattacatacttatgattaaagaaggttagtcccacccttaccttaggttatatgatcgccaggttctaccactttctct 57059  T
Q  225 tctctg 230  Q
    ||||||    
T  57060 tctctg 57065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 135; Significance: 2e-70; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 25 - 191
Target Start/End: Complemental strand, 10611 - 10445
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10611 caccaattatcaacctaattcatcgtattatctactctttctacaatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 10512  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttag 191  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  10511 aatgttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacccttaccttag 10445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 191
Target Start/End: Original strand, 3864 - 3927
Alignment:
Q  128 gttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttag 191  Q
    |||||| ||||||||||||||||||||||||| |||||||||||| ||| || | |||||||||    
T  3864 gttaaatcctttttcaggattacatacttatgtttaaagaaggttggtcacacccttaccttag 3927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 25 - 230
Target Start/End: Original strand, 8950 - 9154
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| ||||||| ||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8950 caccaattatcaacctaattcatcgcattatatactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 9049  T
Q  125 aaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctct 224  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| || || | |  |||||||||||||||    
T  9050 aagattaaaccctttttcaggattacatacttatgattaaagaaggttagtcccacccttaccttagattgatcga-cgaaggactctaccgctttctct 9148  T
Q  225 tctctg 230  Q
     |||||    
T  9149 cctctg 9154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 38 - 179
Target Start/End: Original strand, 174121 - 174262
Alignment:
Q  38 cctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccct 137  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  174121 cctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggttaaaccct 174220  T
Q  138 ttttcaggattacatacttatgattaaagaaggttagtccca 179  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  174221 ttttcaggattacatacttatgattaaagaaggttagtccca 174262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 25 - 230
Target Start/End: Original strand, 6303 - 6510
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaaca-tcaaaacctattaacaacta 123  Q
    |||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||| ||||||||    
T  6303 caccaattatcaacctaattcatcggattatctactctttctacaatcaattttagtttcaaaccctaattctacaacattaaaaacctataaacaacta 6402  T
Q  124 caaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttct 222  Q
    |||| |||| ||||||||||| ||||||  ||| || |||| |||| | |||||  | | ||||||||||||||||||||||||||||||||||||||||    
T  6403 caagattaatccctttttcagaattacacaactcattattagagaaagctagtcttacccttaccttagattgattgatcgcaaggttctaccgctttct 6502  T
Q  223 cttctctg 230  Q
    ||||||||    
T  6503 cttctctg 6510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 5517 - 5633
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5517 caccaattatcaacctaattcatcggattatctactctttctacgatcaattttagttccaaaccctaattctacaacatcaaaacctattaacaactac 5616  T
Q  125 aaggttaaacccttttt 141  Q
    || ||||||||||||||    
T  5617 aaagttaaacccttttt 5633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 32 - 138
Target Start/End: Original strand, 20093 - 20199
Alignment:
Q  32 tattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactacaaggtta 131  Q
    |||||||||| |||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20093 tattaacctaattcatcggattatctattctttctacaatcaattttaatttcaaaccctaattctaaaacatcaaaacctattaacaactacaaggtta 20192  T
Q  132 aaccctt 138  Q
    |||||||    
T  20193 aaccctt 20199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 137
Target Start/End: Original strand, 571 - 683
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| ||||||||||||| |||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  571 caccaattatcaacctaattcatcggattatatactctttctatgatcaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 670  T
Q  125 aaggttaaaccct 137  Q
    || ||||||||||    
T  671 aatgttaaaccct 683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1437 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold1437
Description:

Target: scaffold1437; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 25 - 163
Target Start/End: Complemental strand, 459 - 321
Alignment:
Q  25 caccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatcaaaacctattaacaactac 124  Q
    |||||| ||| |||||| |||||||||||||||| ||||| ||  || |||||||||||| |||| ||||| ||||||||||||||||||||||||||||    
T  459 caccaattatcaacctaattcatcggattatctaatctttttatgatcaattttagtttccaaccttaattttacaacatcaaaacctattaacaactac 360  T
Q  125 aaggttaaaccctttttcaggattacatacttatgatta 163  Q
    || ||||||||||||||  |||| |||||||||||||||    
T  359 aatgttaaaccctttttttggatgacatacttatgatta 321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 95 - 230
Target Start/End: Complemental strand, 6514 - 6380
Alignment:
Q  95 tctacaacatcaaaacctattaacaactacaa-ggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagat 193  Q
    |||| ||||||||||| ||  ||||||||||| ||||||||||||||| || ||||||||||||||||||| |||||||||||||| | ||||||||| |    
T  6514 tctataacatcaaaac-taacaacaactacaaaggttaaacccttttt-agaattacatacttatgattaatgaaggttagtcccacccttaccttaggt 6417  T
Q  194 tgattgatcgcaaggttctaccgctttctcttctctg 230  Q
    |   |||||||||||||||||||||||||||||||||    
T  6416 tagatgatcgcaaggttctaccgctttctcttctctg 6380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 195
Target Start/End: Complemental strand, 38624 - 38437
Alignment:
Q  8 ttattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattt-tagtttcaaaccctaattctacaacatca 106  Q
    ||||||||||||||||||| ||| | | |   || ||||| |||||| |||| ||||| ||||| || || || ||| |||||  | ||||| |||||||    
T  38624 ttattccacaacctgaacatcaattttcatgttaattcattggattacctacactttcaacaatcaaattgtaatttaaaacctaacttctataacatca 38525  T
Q  107 aaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattg 195  Q
    |||| |||||||||||||||  |||||||||||||||| |||| ||||| |||||||||||||||||||| || | |||||||||||||    
T  38524 aaac-tattaacaactacaaaattaaaccctttttcagaattatatactcatgattaaagaaggttagtcacacccttaccttagattg 38437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 169328 - 169408
Alignment:
Q  26 accaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaattctacaacatca 106  Q
    ||||| ||| |||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  169328 accaattatcaacctaattcatcggattatctactctttctacgatcaattttagtttcaaaccctaattctacaacatca 169408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 194
Target Start/End: Original strand, 17078 - 17161
Alignment:
Q  111 ctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagatt 194  Q
    |||| ||||||||||| |||||||||||||| || |||| ||||| ||||||||||||| || |||||| | ||||||||||||    
T  17078 ctatcaacaactacaaagttaaaccctttttaagaattatatactcatgattaaagaagattcgtcccacccttaccttagatt 17161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 194
Target Start/End: Original strand, 26609 - 26692
Alignment:
Q  111 ctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagatt 194  Q
    |||| ||||||||||| |||||||||||||| || |||| ||||| ||||||||||||| || |||||| | ||||||||||||    
T  26609 ctatcaacaactacaaagttaaaccctttttaagaattatatactcatgattaaagaagattcgtcccacccttaccttagatt 26692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2103 - 2189
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaa 87  Q
    ||||||||||||| |||||||||||||||| ||||| | ||||||||||||||| |||||||||| ||||| |||||||||||||||    
T  2103 cctatgattattctacaacctgaacaccaattattaccttagttcatcggattacctactctttcaacaatcaattttagtttcaaa 2189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 111 - 195
Target Start/End: Original strand, 28686 - 28770
Alignment:
Q  111 ctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattg 195  Q
    ||||||||||||||||| |||||| ||||||||| |||| |||||||||||||||||||||||||||||   |||||||||||||    
T  28686 ctattaacaactacaagattaaacgctttttcagaattatatacttatgattaaagaaggttagtcccactcttaccttagattg 28770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 26704 - 26818
Alignment:
Q  116 aacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctac 214  Q
    ||||||||||| ||||||||||||||||| |||| | | | ||  |||| |||| |||| ||||| | ||||| ||||||||||||||||||||||||||    
T  26704 aacaactacaaagttaaaccctttttcagaattatacaacctaaaattagagaaagttaatcccacccttaccgtagattgattgatcgcaaggttctac 26803  T
Q  215 cgctttctcttctct 229  Q
    |||||||||||||||    
T  26804 cgctttctcttctct 26818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 195
Target Start/End: Original strand, 23570 - 23670
Alignment:
Q  94 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagat 193  Q
    ||||| ||||||||||| |||||||||||||||  ||||||||||||| || |||| ||||| ||||||||||||||| ||||||| | |||||||||||    
T  23570 ttctataacatcaaaac-tattaacaactacaaaattaaacccttttttagaattatatactcatgattaaagaaggtcagtcccacccttaccttagat 23668  T
Q  194 tg 195  Q
    ||    
T  23669 tg 23670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 195
Target Start/End: Original strand, 3161 - 3261
Alignment:
Q  94 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagat 193  Q
    ||||| ||||||||||| ||| |||||||||||  |||||||||||||||  |||| ||||| ||||||||||||||||||||||| | |||||||||||    
T  3161 ttctataacatcaaaac-tatcaacaactacaaaattaaaccctttttcataattatatactcatgattaaagaaggttagtcccacccttaccttagat 3259  T
Q  194 tg 195  Q
    ||    
T  3260 tg 3261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 195
Target Start/End: Complemental strand, 59751 - 59651
Alignment:
Q  94 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagat 193  Q
    ||||| || |||||||| ||| ||||||||||| ||||||||||||||||| |||| ||||| |||||||||||||||||| |||| | |||||||||||    
T  59751 ttctataatatcaaaac-tatcaacaactacaaagttaaaccctttttcagaattatatactcatgattaaagaaggttagacccacccttaccttagat 59653  T
Q  194 tg 195  Q
    ||    
T  59652 tg 59651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 192
Target Start/End: Original strand, 38 - 181
Alignment:
Q  49 ggattatctactctttctacaattaattttagtttcaaaccctaa-ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggat 147  Q
    |||||| |||||||||| ||||| ||||||   ||  |||||||| ||||| ||||||||||| |||||||||||||||  | |||||||||||||| |     
T  38 ggattacctactctttcaacaatcaattttcaattttaaccctaacttctataacatcaaaac-tattaacaactacaaattaaaaccctttttcagaac 136  T
Q  148 tacatacttatgattaaagaaggttagtcccaactttaccttaga 192  Q
     | ||||| ||||||||||||||||||||||| | ||||||||||    
T  137 catatactaatgattaaagaaggttagtcccacccttaccttaga 181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 158846 - 158782
Alignment:
Q  166 gaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttctctg 230  Q
    |||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||    
T  158846 gaaggttagtcccacccttaccttagattgattgatcgcaaggttttaccgctttctcttctctg 158782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 228
Target Start/End: Complemental strand, 16609 - 16380
Alignment:
Q  3 tatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaatt-aattttagtttcaaaccctaatt-ctaca 100  Q
    |||||||||||  |||||| |||||||| ||||| |||| ||||||  |||| |||||||||| |||| | ||||||| | || |||||||||| ||  |    
T  16609 tatgattattctgcaacctaaacaccaattattaccctaattcatcatattacctactctttcaacaaatcaattttaatctctaaccctaatttctcta 16510  T
Q  101 a-catcaaaacctattaacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccaactttaccttagattgatt 198  Q
    | ||||||| ||||  ||||||||||||||||||||||||||||| |||| | | |  || |||| | || |||| || || | ||||||||||||||||    
T  16509 atcatcaaa-cctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagataaagttaatctcacccttaccttagattgatt 16411  T
Q  199 gatcgcaaggttctac-cgctttctcttctc 228  Q
    |||| |||||||||||  |||||||||||||    
T  16410 gatcacaaggttctacaagctttctcttctc 16380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 18892 - 18660
Alignment:
Q  3 tatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaatt-aattttagtttcaaaccctaatt-ctaca 100  Q
    |||||| ||||  |||||| |||||||| ||||| |||| |||||   |||| |||||||||| |||| | ||||||| | || |||||||||| ||  |    
T  18892 tatgatcattctccaacctaaacaccaattattaccctaattcattatattacctactctttcaacaaatcaattttaatctctaaccctaatttctcta 18793  T
Q  101 a-catcaaaacctattaacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccaactttaccttagattgatt 198  Q
    | |||||  |||||  ||||||||||||| |||||| ||||| || |||| | | || || |||| |||| |||| ||||| | | ||||||||||| ||    
T  18792 atcatcatgacctaacaacaactacaaggctaaaccgtttttaagaattatacaactcattattagagaaagttaatcccaccctcaccttagattggtt 18693  T
Q  199 gatcgcaaggttctac-cgctttctcttctctg 230  Q
    |||  |||||||||||  |||||||||||||||    
T  18692 gattacaaggttctacaagctttctcttctctg 18660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 2679 - 2786
Alignment:
Q  3 tatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaa-ttctacaa 101  Q
    ||||||||||| |||| ||||||||||| ||||| | || |||||| ||||| |||||||||| ||||| ||||||| ||||||||||||| ||||| ||    
T  2679 tatgattattcaacaatctgaacaccaattattaccttaattcatcagattacctactctttcaacaatcaattttaatttcaaaccctaatttctataa 2778  T
Q  102 catcaaaa 109  Q
    ||||||||    
T  2779 catcaaaa 2786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 149
Target Start/End: Original strand, 2858 - 2891
Alignment:
Q  116 aacaactacaaggttaaaccctttttcaggatta 149  Q
    ||||||||||||||||||||||||||||| ||||    
T  2858 aacaactacaaggttaaaccctttttcagaatta 2891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 49720 - 49822
Alignment:
Q  129 ttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctac-cgctttctcttct 227  Q
    |||||||||||||||| ||||   ||| ||||||||||||||||||||||| | ||||||||||||| |||||  |||||||||||  ||||||||||||    
T  49720 ttaaaccctttttcagaattatggactcatgattaaagaaggttagtcccacccttaccttagattggttgattacaaggttctacaagctttctcttct 49819  T
Q  228 ctg 230  Q
    |||    
T  49820 ctg 49822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 66268 - 66183
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaa 87  Q
    ||||||||||||| |||||||||||||||| ||||| | ||||||||||||||| |||||||||| | ||| |||||||||||||||    
T  66268 cctatgattattctacaacctgaacaccaattattaccttagttcatcggattacctactctttc-aaaatcaattttagtttcaaa 66183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 328318 - 328249
Alignment:
Q  160 attaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttctct 229  Q
    |||| |||| |||||||||| | ||||||||| ||   ||||||||||||||||||||||||||||||||    
T  328318 attagagaaagttagtcccacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctct 328249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 2275 - 2162
Alignment:
Q  116 aacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctac 214  Q
    ||||||||||||||||||||||||||||| |||| | | ||||  |||| ||||  ||||||||| | ||||||||| ||   |||||||||||||||||    
T  2275 aacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaaattagtcccacccttaccttaggttagatgatcgcaaggttctac 2176  T
Q  215 cgctttctcttctc 228  Q
    ||||||||||||||    
T  2175 cgctttctcttctc 2162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 5380 - 5267
Alignment:
Q  116 aacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctac 214  Q
    |||||||||||||||||||||||||| || |||| | | ||||  |||| |||| |||||||||| | ||||||||| ||   |||||||||||||||||    
T  5380 aacaactacaaggttaaaccctttttaagaattatacaacttaaaattagagaaagttagtcccacccttaccttaggttagatgatcgcaaggttctac 5281  T
Q  215 cgctttctcttctc 228  Q
    ||||||||||||||    
T  5280 cgctttctcttctc 5267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 5227 - 5170
Alignment:
Q  171 ttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttctc 228  Q
    ||||||||| | ||||||||| ||   |||||||||||||||||||||||||||||||    
T  5227 ttagtcccacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctc 5170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 194
Target Start/End: Original strand, 31886 - 31985
Alignment:
Q  94 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagat 193  Q
    ||||||||||||||||| |||||||||||| ||  |||||||||||||||| || | ||||| ||||||||||| |||||||| || | |||||||||||    
T  31886 ttctacaacatcaaaac-tattaacaactataaaattaaaccctttttcagaatcatatactcatgattaaagatggttagtctcacccttaccttagat 31984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 32039 - 32100
Alignment:
Q  129 ttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttacctta 190  Q
    |||||||||||||||| || | ||||| |||||||||||||||||| |||| | ||||||||    
T  32039 ttaaaccctttttcagaatcatatactcatgattaaagaaggttagccccacccttacctta 32100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 112 - 195
Target Start/End: Complemental strand, 2029 - 1946
Alignment:
Q  112 tattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagattg 195  Q
    |||||||||| ||||  |||||||||||||||| |||| | ||| ||||||||||||||||||||||| | |||||||||||||    
T  2029 tattaacaacaacaaaattaaaccctttttcagaattatagactcatgattaaagaaggttagtcccaccgttaccttagattg 1946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 35487 - 35425
Alignment:
Q  167 aaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttctct 229  Q
    ||||||||||||| | |||||||||||||||||||||||||||| ||| ||||||||||||||    
T  35487 aaggttagtcccatccttaccttagattgattgatcgcaaggttttactgctttctcttctct 35425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 195
Target Start/End: Complemental strand, 7609 - 7509
Alignment:
Q  94 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagat 193  Q
    ||||| ||||||||||| ||| |||||||| ||  |||||||||||||||| || | ||||| || |||||||||||||||||||| | |||||||||||    
T  7609 ttctataacatcaaaac-tatcaacaactataaaattaaaccctttttcagaatcatatactcataattaaagaaggttagtcccacccttaccttagat 7511  T
Q  194 tg 195  Q
    ||    
T  7510 tg 7509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 85 - 195
Target Start/End: Complemental strand, 40269 - 40156
Alignment:
Q  85 aaaccctaa-ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattac---atacttatgattaaagaaggttagtcccaa 180  Q
    ||||||||| ||||| ||||||||||| ||| |||||||||| ||||||||||||||| || ||||    ||||| ||||||| |||||||||||||||     
T  40269 aaaccctaacttctataacatcaaaac-tatcaacaactacatggttaaacccttttttagaattattatatactcatgattagagaaggttagtcccac 40171  T
Q  181 ctttaccttagattg 195  Q
    | |||||||||||||    
T  40170 ccttaccttagattg 40156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 8086 - 8129
Alignment:
Q  100 aacatcaaaacctattaacaactacaaggttaaaccctttttca 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  8086 aacatcaaaacctattaacaactacaaggttaaaccctttttca 8129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 28528 - 28607
Alignment:
Q  116 aacaactacaa-ggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagatt 194  Q
    ||||||||||| |||||||||||||||||| |||| ||||| |||||||| ||||||||||||||   ||||||||||||    
T  28528 aacaactacaaaggttaaaccctttttcagaattatatactcatgattaaggaaggttagtcccactcttaccttagatt 28607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 29273 - 29316
Alignment:
Q  100 aacatcaaaacctattaacaactacaaggttaaaccctttttca 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  29273 aacatcaaaacctattaacaactacaaggttaaaccctttttca 29316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 230
Target Start/End: Original strand, 18252 - 18367
Alignment:
Q  116 aacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctac 214  Q
    ||||||||||||||||||||||||||||| |||| | | |  || |||| |||| | ||||| || | ||||||||| ||   |||||||||||||||||    
T  18252 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcacacccttaccttaggttagatgatcgcaaggttctac 18351  T
Q  215 cgctttctcttctctg 230  Q
    ||||||||||||||||    
T  18352 cgctttctcttctctg 18367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 8704 - 8798
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaattaattttagtttcaaaccctaatt 95  Q
    |||||||||| ||  ||||||||||||||| ||||| | || |||||| ||||| |||||||||| ||||| ||||||| ||||||| |||||||    
T  8704 cctatgattactctgcaacctgaacaccaattattaccttaattcatctgattacctactctttcaacaatcaattttaatttcaaaacctaatt 8798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 564 - 667
Alignment:
Q  94 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacatacttatgattaaagaaggttagtcccaactttaccttagat 193  Q
    ||||| ||||||||||  ||| |||||| ||||  ||||||| ||||| || |||| | ||| ||||||||||||||||||||||| | |||||||||||    
T  564 ttctataacatcaaaat-tatcaacaacaacaaaattaaaccatttttaagaattatagactcatgattaaagaaggttagtcccacccttaccttagat 662  T
Q  194 tgatt 198  Q
    |||||    
T  663 tgatt 667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 6715 - 6646
Alignment:
Q  160 attaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttctct 229  Q
    |||| |||| |||||||||| | ||||| || |||||||||| ||||||||||||| |||||||||||||    
T  6715 attagagaaagttagtcccacccttaccatatattgattgattgcaaggttctaccactttctcttctct 6646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 194
Target Start/End: Original strand, 19163 - 19263
Alignment:
Q  94 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccaactttaccttaga 192  Q
    ||||| ||||||||||| || |||||||||||||||||||||||||||||| |||| |  |||||  |||| |||| |||||||||| | |||| |||||    
T  19163 ttctataacatcaaaac-taataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttacgttaga 19261  T
Q  193 tt 194  Q
    ||    
T  19262 tt 19263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 19117 - 19160
Alignment:
Q  94 ttctacaacatcaaaacctattaacaactacaaggttaaaccctt 138  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||||    
T  19117 ttctataacatcaaaac-tatcaacaactacaaggttaaaccctt 19160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 21404 - 21473
Alignment:
Q  2 ctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaat 71  Q
    |||||||||||| |||||||||||||||| ||||| | || |||||| ||||| |||||||||| |||||    
T  21404 ctatgattattctacaacctgaacaccaattattaccttaattcatcagattacctactctttcaacaat 21473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 13469 - 13532
Alignment:
Q  167 aaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttctctg 230  Q
    |||||||||| || | |||||||||||||||||||||||  ||| |||| ||||||||||||||    
T  13469 aaggttagtcacatccttaccttagattgattgatcgcagagttttaccactttctcttctctg 13532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 20110 - 20047
Alignment:
Q  166 gaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttctct 229  Q
    |||||||||||||  | ||||||||| ||||| |||||||||  ||||||||||||||||||||    
T  20110 gaaggttagtcccgcccttaccttaggttgatcgatcgcaagactctaccgctttctcttctct 20047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 18045 - 17936
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccaactt 183  Q
    |||||||||| ||| ||||||||||| ||  |||||||||||||||||| |||||||||| |||| |  |||||  |||| |||| |||||||||| | |    
T  18045 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaatcctttttcagaattatacaacttagaattagagaaagttagtcccaccct 17947  T
Q  184 taccttagatt 194  Q
    |||||||||||    
T  17946 taccttagatt 17936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21985 - 22055
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctacaat 71  Q
    ||||||||||||| |||||||||||||||| | ||| | || |||||| ||||| |||||||||| |||||    
T  21985 cctatgattattctacaacctgaacaccaattcttaccttaattcatcagattacctactctttcaacaat 22055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 1967 - 2030
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 149  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| ||||    
T  1967 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 2030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 23987 - 23932
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaacccttttt 141  Q
    |||||||||| ||| ||||||||||| || |||||||||||||||||||||||||||    
T  23987 aaccctaatttctataacatcaaaac-taataacaactacaaggttaaacccttttt 23932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 117294 - 117362
Alignment:
Q  1 cctatgattattccacaacctgaacaccaagtattaacctagttcatcggattatctactctttctaca 69  Q
    ||||||||||||| ||||| |||||||||  |||||   || |||||| ||||||||||||||||||||    
T  117294 cctatgattattctacaacttgaacaccacctattactttaattcatcagattatctactctttctaca 117362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 186301 - 186238
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 149  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| ||||    
T  186301 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 186238  T

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Target: scaffold0878 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 3527 - 3469
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcag 144  Q
    |||||||||| ||| ||||||||||| ||  |||||||||||||||||||||||||||||    
T  3527 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcag 3469  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 3076 - 3013
Alignment:
Q  166 gaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccg-ctttctcttctc 228  Q
    |||||||||||||| | ||||||| ||||||| ||| |||||||||||| | ||||||||||||    
T  3076 gaaggttagtcccacccttaccttggattgatcgattgcaaggttctacagactttctcttctc 3013  T

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Target: scaffold0231 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 149
Target Start/End: Complemental strand, 17596 - 17563
Alignment:
Q  116 aacaactacaaggttaaaccctttttcaggatta 149  Q
    ||||||||||||||||||||||||||||| ||||    
T  17596 aacaactacaaggttaaaccctttttcagaatta 17563  T

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Target: scaffold0819 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 5289 - 5325
Alignment:
Q  60 tctttctacaattaattttagtttcaaaccctaattc 96  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  5289 tcttcctacaatcaattttagtttcaaaccctaattc 5325  T

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Target: scaffold0574 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 7273 - 7317
Alignment:
Q  170 gttagtcccaactttaccttagattgattgatcgcaaggttctac 214  Q
    |||||||||| | ||||||||||||||||||  ||||||||||||    
T  7273 gttagtcccacccttaccttagattgattgacagcaaggttctac 7317  T

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Target: scaffold0369 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 15720 - 15665
Alignment:
Q  86 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaacccttttt 141  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||    
T  15720 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaacccttttt 15665  T

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Target: scaffold0175 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 8670 - 8733
Alignment:
Q  166 gaaggttagtcccaactttaccttagattgattgatcgcaaggttctaccgctttctcttctctg 230  Q
    |||||||||||||| | ||||||||||||||| ||| | |||  ||||||||||||||| |||||    
T  8670 gaaggttagtcccacccttaccttagattgatcgat-gtaagactctaccgctttctctcctctg 8733  T

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Target: scaffold0077 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 5972 - 6024
Alignment:
Q  160 attaaagaaggttagtcccaactttaccttagattgattgatcgcaaggttct 212  Q
    |||||||||||||||||||| | ||||||||| || |||||| ||||| ||||    
T  5972 attaaagaaggttagtcccacccttaccttaggttaattgattgcaagcttct 6024  T

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