View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0910_high_4 (Length: 272)
Name: NF0910_high_4
Description: NF0910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0910_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 14 - 255
Target Start/End: Original strand, 38004811 - 38005052
Alignment:
| Q |
14 |
gagaggaacacatgaaatcttacggaatgatgataacgtctgataagaacaaaagtaaatttaacatccataattattctcaattacaatatctgctgaa |
113 |
Q |
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| T |
38004811 |
gagaggaacacaagaaatcttacggaatgatgataacgtctgataagaacaaaagtaaatttaacatccataactattctcaattacaatatctgctgaa |
38004910 |
T |
|
| Q |
114 |
nnnnnnngttggaaccaaaagtgaaatttcaccacaatgaaactttgaaaaccaattatattgactcccactaaaataaaattcaattgtcaattaactt |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38004911 |
tttttttgttggaaccaaaagtgaaatttcaccacaatgaaactttgaaaaccaattatattgactcccactaaaataaaattcaattgtcaattaactt |
38005010 |
T |
|
| Q |
214 |
gaattagaatcatcgatccccacaaatactcaatccatcatg |
255 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||| |
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| T |
38005011 |
gaattagaatcatcgatccccaaaaatactcaatccatcatg |
38005052 |
T |
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