View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0912_high_11 (Length: 398)
Name: NF0912_high_11
Description: NF0912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0912_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 323; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 19 - 371
Target Start/End: Original strand, 25707553 - 25707901
Alignment:
| Q |
19 |
ttctcatgagttgggtacgtaattgtgttgataagacatgaacaattaactaatcaaatatttattttttgagagcaactaatcaaaattatgttaatat |
118 |
Q |
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| T |
25707553 |
ttctcatgagttgggtacgtaattgtgttgataagacatgaacaattaactaatcaaatatttattttttgagagcaactaatcaaaattttgttaatat |
25707652 |
T |
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| Q |
119 |
aataaggaatagtgaaatcattaggtaatttggggtactatacatcgaagatgccaaaagaggaatcagagtttatcgggcaacctagtgggaagaaaat |
218 |
Q |
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| T |
25707653 |
aataaggaatagtgaaatcattaggtaatttggggtactatacatcgaagatgccaaaagaggaatcagagtttttcgggcaacctagtgggaagaaaat |
25707752 |
T |
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| Q |
219 |
tctcaatatgtgggaaagtgattggttggcatcccattcctatcatcaaaacatgacgattgccaaataattttgcttttgttattgtttcattattatc |
318 |
Q |
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| T |
25707753 |
tctcaatatgtgggaaagtgattggttggcatcccattcctatcatcaaaacatgacgattgccaaataattttgcttttgttattgtttcattattatc |
25707852 |
T |
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| Q |
319 |
ataataaaagatgaaattttttgatataaatcctacaaattagataggaccac |
371 |
Q |
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| T |
25707853 |
---ataaaagatgaaa-tttttgatataaatcctacaaattagataggaccac |
25707901 |
T |
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