View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0912_low_24 (Length: 320)

Name: NF0912_low_24
Description: NF0912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0912_low_24
NF0912_low_24
[»] chr6 (20 HSPs)
chr6 (97-232)||(7104486-7104621)
chr6 (97-232)||(8790009-8790144)
chr6 (121-234)||(31068406-31068519)
chr6 (121-232)||(31896623-31896734)
chr6 (121-231)||(30384170-30384280)
chr6 (121-228)||(14261552-14261659)
chr6 (121-230)||(4199586-4199696)
chr6 (121-233)||(29864748-29864860)
chr6 (121-183)||(7498076-7498138)
chr6 (121-183)||(34774371-34774433)
chr6 (121-182)||(27585232-27585293)
chr6 (121-230)||(3109349-3109458)
chr6 (121-182)||(6475790-6475851)
chr6 (192-230)||(7498157-7498195)
chr6 (121-178)||(10262853-10262910)
chr6 (193-230)||(656861-656898)
chr6 (204-233)||(2300145-2300174)
chr6 (200-229)||(23929380-23929409)
chr6 (120-176)||(5958032-5958088)
chr6 (204-232)||(6196937-6196965)
[»] chr1 (38 HSPs)
chr1 (97-232)||(48207492-48207627)
chr1 (97-232)||(48198909-48199044)
chr1 (121-232)||(6313562-6313673)
chr1 (121-231)||(25613078-25613188)
chr1 (121-230)||(29395537-29395646)
chr1 (121-230)||(51702580-51702689)
chr1 (121-230)||(20111681-20111790)
chr1 (121-236)||(28386551-28386667)
chr1 (121-229)||(49231970-49232078)
chr1 (121-231)||(9321617-9321728)
chr1 (121-183)||(29220098-29220160)
chr1 (121-232)||(5494255-5494366)
chr1 (121-232)||(38535254-38535365)
chr1 (121-232)||(38557472-38557583)
chr1 (121-227)||(45273547-45273653)
chr1 (121-230)||(46328952-46329063)
chr1 (121-182)||(52706366-52706427)
chr1 (121-177)||(14389400-14389456)
chr1 (121-230)||(45319453-45319562)
chr1 (121-176)||(39758861-39758916)
chr1 (121-176)||(39764215-39764270)
chr1 (121-182)||(51826008-51826069)
chr1 (125-182)||(26881863-26881920)
chr1 (121-182)||(45535735-45535796)
chr1 (194-232)||(1923093-1923131)
chr1 (121-155)||(25830425-25830459)
chr1 (193-230)||(15835374-15835411)
chr1 (192-229)||(48176646-48176683)
chr1 (197-229)||(18799411-18799443)
chr1 (192-232)||(25830357-25830397)
chr1 (204-235)||(35280339-35280370)
chr1 (120-182)||(19894801-19894863)
chr1 (204-234)||(45759453-45759483)
chr1 (200-230)||(49197760-49197790)
chr1 (121-182)||(1923416-1923477)
chr1 (201-230)||(47781325-47781354)
chr1 (196-233)||(47784302-47784339)
chr1 (204-232)||(6303772-6303800)
[»] chr4 (41 HSPs)
chr4 (97-234)||(38234565-38234702)
chr4 (121-232)||(27769050-27769161)
chr4 (121-232)||(48262061-48262172)
chr4 (121-235)||(54342133-54342247)
chr4 (125-230)||(32683134-32683239)
chr4 (121-234)||(50019177-50019290)
chr4 (121-232)||(5442379-5442488)
chr4 (121-229)||(23988183-23988291)
chr4 (121-228)||(29649131-29649238)
chr4 (121-228)||(32323055-32323163)
chr4 (121-225)||(48531925-48532029)
chr4 (121-227)||(41726092-41726198)
chr4 (121-230)||(49500639-49500748)
chr4 (120-228)||(49833973-49834082)
chr4 (121-183)||(5801691-5801753)
chr4 (121-237)||(37827523-37827644)
chr4 (121-232)||(42315860-42315971)
chr4 (121-183)||(51321842-51321904)
chr4 (121-230)||(30966184-30966293)
chr4 (121-182)||(7808976-7809037)
chr4 (121-182)||(7820927-7820988)
chr4 (125-182)||(8583048-8583105)
chr4 (119-176)||(53272823-53272880)
chr4 (120-182)||(52110237-52110299)
chr4 (125-182)||(3434874-3434931)
chr4 (121-182)||(42217495-42217555)
chr4 (195-232)||(54852658-54852695)
chr4 (121-182)||(37916778-37916844)
chr4 (200-233)||(16019913-16019946)
chr4 (120-177)||(25936902-25936959)
chr4 (200-240)||(5105007-5105046)
chr4 (192-232)||(37916865-37916905)
chr4 (121-177)||(56399018-56399074)
chr4 (204-234)||(24130456-24130486)
chr4 (125-179)||(28484862-28484916)
chr4 (194-236)||(47686872-47686914)
chr4 (192-230)||(51321924-51321962)
chr4 (120-177)||(44647699-44647756)
chr4 (204-232)||(22202716-22202744)
chr4 (203-231)||(37369430-37369458)
chr4 (194-234)||(54510611-54510651)
[»] chr7 (50 HSPs)
chr7 (97-226)||(46035452-46035582)
chr7 (121-232)||(23102277-23102388)
chr7 (121-235)||(28343296-28343410)
chr7 (97-175)||(26183056-26183134)
chr7 (97-180)||(12893159-12893242)
chr7 (120-235)||(37971500-37971615)
chr7 (121-230)||(3023911-3024019)
chr7 (121-234)||(7994142-7994255)
chr7 (121-229)||(18839280-18839388)
chr7 (121-232)||(29613901-29614013)
chr7 (128-232)||(30823580-30823684)
chr7 (121-233)||(510632-510746)
chr7 (121-234)||(9881396-9881508)
chr7 (121-232)||(39785082-39785195)
chr7 (121-229)||(29893942-29894051)
chr7 (121-228)||(12741359-12741467)
chr7 (121-230)||(48136361-48136470)
chr7 (121-229)||(39029039-39029147)
chr7 (121-183)||(32884739-32884801)
chr7 (121-182)||(35089144-35089205)
chr7 (121-232)||(40459830-40459941)
chr7 (121-234)||(152839-152952)
chr7 (121-175)||(33891401-33891455)
chr7 (121-232)||(47912521-47912632)
chr7 (121-182)||(12252433-12252494)
chr7 (121-182)||(33475515-33475576)
chr7 (121-182)||(43056735-43056796)
chr7 (121-230)||(30111771-30111880)
chr7 (121-230)||(21068342-21068453)
chr7 (121-180)||(37328812-37328871)
chr7 (120-175)||(44255946-44256001)
chr7 (121-175)||(33383627-33383681)
chr7 (121-182)||(27417695-27417756)
chr7 (121-230)||(34114540-34114649)
chr7 (128-183)||(28034286-28034341)
chr7 (120-182)||(42677294-42677356)
chr7 (197-234)||(26183119-26183156)
chr7 (121-155)||(47067686-47067720)
chr7 (201-234)||(47879770-47879803)
chr7 (201-234)||(47914848-47914881)
chr7 (199-235)||(33383668-33383704)
chr7 (199-230)||(33891383-33891414)
chr7 (204-235)||(44342995-44343026)
chr7 (121-155)||(44121134-44121168)
chr7 (200-229)||(3635193-3635222)
chr7 (199-232)||(28034229-28034262)
chr7 (129-182)||(30889186-30889239)
chr7 (192-229)||(37328884-37328921)
chr7 (192-233)||(46405297-46405338)
chr7 (192-232)||(32884816-32884856)
[»] chr2 (35 HSPs)
chr2 (121-235)||(26789771-26789885)
chr2 (121-234)||(18178258-18178371)
chr2 (121-232)||(25289141-25289252)
chr2 (121-229)||(28845564-28845672)
chr2 (121-232)||(7027891-7028002)
chr2 (121-235)||(33136580-33136697)
chr2 (120-230)||(3464572-3464682)
chr2 (121-182)||(13832716-13832777)
chr2 (121-235)||(29941867-29941981)
chr2 (121-230)||(45547893-45548002)
chr2 (124-227)||(43079472-43079576)
chr2 (121-234)||(7486952-7487065)
chr2 (128-230)||(10658423-10658525)
chr2 (120-230)||(2289261-2289371)
chr2 (121-177)||(6288608-6288664)
chr2 (120-175)||(45497489-45497544)
chr2 (120-175)||(45505231-45505286)
chr2 (121-175)||(28739186-28739240)
chr2 (122-183)||(35906945-35907006)
chr2 (192-232)||(214622-214662)
chr2 (192-231)||(379967-380006)
chr2 (124-174)||(14919811-14919861)
chr2 (120-182)||(27979874-27979936)
chr2 (120-182)||(28066404-28066466)
chr2 (124-177)||(36597697-36597750)
chr2 (194-230)||(20156343-20156379)
chr2 (121-182)||(35171428-35171493)
chr2 (121-177)||(38821303-38821359)
chr2 (204-235)||(20605573-20605604)
chr2 (204-235)||(35317760-35317791)
chr2 (192-230)||(30239160-30239198)
chr2 (120-182)||(43023503-43023565)
chr2 (201-230)||(1188675-1188704)
chr2 (124-160)||(3576748-3576784)
chr2 (121-177)||(20156633-20156689)
[»] chr8 (44 HSPs)
chr8 (121-232)||(14781245-14781356)
chr8 (121-232)||(18305074-18305185)
chr8 (121-228)||(44724898-44725005)
chr8 (121-230)||(16365263-16365372)
chr8 (125-230)||(18957833-18957938)
chr8 (121-235)||(19716973-19717089)
chr8 (121-230)||(32498877-32498986)
chr8 (120-236)||(42304734-42304852)
chr8 (121-229)||(4030443-4030552)
chr8 (121-229)||(39466634-39466742)
chr8 (120-222)||(43307661-43307763)
chr8 (125-230)||(20831079-20831184)
chr8 (121-227)||(31626286-31626392)
chr8 (121-234)||(9458485-9458598)
chr8 (121-234)||(40264270-40264383)
chr8 (121-232)||(7149012-7149123)
chr8 (121-183)||(7467393-7467455)
chr8 (121-229)||(37857864-37857971)
chr8 (121-230)||(4656054-4656163)
chr8 (121-182)||(10795422-10795483)
chr8 (121-182)||(43489898-43489959)
chr8 (120-172)||(10294564-10294616)
chr8 (121-177)||(39371217-39371273)
chr8 (121-176)||(2113766-2113821)
chr8 (125-183)||(38805970-38806028)
chr8 (121-182)||(35143064-35143125)
chr8 (121-182)||(42275922-42275983)
chr8 (121-182)||(43604422-43604483)
chr8 (121-177)||(41385922-41385978)
chr8 (125-180)||(5266790-5266845)
chr8 (124-182)||(1605847-1605905)
chr8 (120-182)||(28620661-28620723)
chr8 (125-183)||(40012341-40012399)
chr8 (122-176)||(14062471-14062525)
chr8 (192-230)||(34893415-34893453)
chr8 (121-177)||(9209888-9209944)
chr8 (121-227)||(9287608-9287707)
chr8 (204-236)||(42734808-42734840)
chr8 (121-176)||(41964650-41964705)
chr8 (121-183)||(10128241-10128303)
chr8 (164-235)||(37566515-37566586)
chr8 (125-155)||(43165856-43165886)
chr8 (205-234)||(42938068-42938097)
chr8 (121-177)||(4302163-4302219)
[»] chr3 (56 HSPs)
chr3 (121-232)||(36673257-36673368)
chr3 (121-232)||(52617084-52617195)
chr3 (121-230)||(11432533-11432642)
chr3 (121-236)||(31645357-31645472)
chr3 (121-230)||(45254554-45254663)
chr3 (121-225)||(44904961-44905065)
chr3 (121-235)||(10728119-10728235)
chr3 (123-241)||(50902406-50902528)
chr3 (121-232)||(18750619-18750732)
chr3 (121-232)||(10661173-10661285)
chr3 (121-228)||(23752504-23752612)
chr3 (121-229)||(50761222-50761332)
chr3 (125-227)||(20833888-20833990)
chr3 (121-182)||(34483252-34483313)
chr3 (121-235)||(36054004-36054118)
chr3 (121-226)||(51736870-51736976)
chr3 (121-229)||(54629836-54629947)
chr3 (121-180)||(39039062-39039121)
chr3 (119-182)||(44707921-44707984)
chr3 (121-230)||(17947204-17947315)
chr3 (120-182)||(45214131-45214193)
chr3 (121-235)||(2124699-2124813)
chr3 (121-235)||(26556845-26556959)
chr3 (121-231)||(30589823-30589933)
chr3 (121-230)||(39841554-39841664)
chr3 (121-176)||(50902514-50902569)
chr3 (125-179)||(52811371-52811425)
chr3 (121-182)||(23360555-23360616)
chr3 (121-182)||(23367395-23367456)
chr3 (121-230)||(27239326-27239439)
chr3 (128-230)||(40898062-40898163)
chr3 (121-182)||(46223353-46223414)
chr3 (121-230)||(24149836-24149945)
chr3 (121-180)||(48380126-48380185)
chr3 (121-182)||(50899493-50899554)
chr3 (121-177)||(23697949-23698005)
chr3 (121-177)||(23716404-23716460)
chr3 (121-177)||(23734860-23734916)
chr3 (121-176)||(34290220-34290275)
chr3 (121-229)||(38628820-38628928)
chr3 (120-182)||(46251246-46251308)
chr3 (125-177)||(19551205-19551257)
chr3 (121-177)||(23754523-23754579)
chr3 (121-230)||(26292563-26292671)
chr3 (121-180)||(5493033-5493092)
chr3 (200-234)||(7319145-7319179)
chr3 (121-183)||(53183125-53183187)
chr3 (194-230)||(26108489-26108525)
chr3 (192-227)||(37455893-37455928)
chr3 (194-241)||(44040889-44040936)
chr3 (204-234)||(995478-995508)
chr3 (121-174)||(26004904-26004957)
chr3 (121-150)||(37455824-37455853)
chr3 (204-232)||(3999145-3999173)
chr3 (204-244)||(44761604-44761643)
chr3 (192-228)||(48380207-48380243)
[»] scaffold0042 (1 HSPs)
scaffold0042 (121-233)||(57166-57278)
[»] chr5 (26 HSPs)
chr5 (121-232)||(13999211-13999323)
chr5 (121-232)||(39853338-39853449)
chr5 (121-229)||(13717081-13717189)
chr5 (121-229)||(13926918-13927027)
chr5 (121-232)||(40012814-40012926)
chr5 (121-235)||(4239574-4239689)
chr5 (121-229)||(1151400-1151508)
chr5 (125-229)||(7947134-7947238)
chr5 (121-224)||(1459300-1459404)
chr5 (121-230)||(4549363-4549474)
chr5 (121-234)||(11632681-11632794)
chr5 (121-182)||(10553714-10553775)
chr5 (121-182)||(40411395-40411456)
chr5 (121-182)||(13949848-13949909)
chr5 (121-180)||(5950104-5950163)
chr5 (127-182)||(10553486-10553541)
chr5 (125-231)||(37014846-37014953)
chr5 (125-174)||(17519499-17519548)
chr5 (125-177)||(3603512-3603564)
chr5 (200-236)||(28592993-28593029)
chr5 (120-182)||(2275316-2275378)
chr5 (122-230)||(26629511-26629619)
chr5 (121-166)||(10572271-10572316)
chr5 (204-236)||(5272431-5272463)
chr5 (204-232)||(21147801-21147829)
chr5 (121-173)||(32827897-32827949)
[»] scaffold0940 (1 HSPs)
scaffold0940 (121-230)||(3573-3682)
[»] scaffold0054 (1 HSPs)
scaffold0054 (121-228)||(36401-36509)
[»] scaffold0016 (1 HSPs)
scaffold0016 (121-235)||(80787-80901)
[»] scaffold0153 (1 HSPs)
scaffold0153 (121-230)||(33824-33933)
[»] scaffold0237 (1 HSPs)
scaffold0237 (121-233)||(20443-20555)
[»] scaffold1521 (1 HSPs)
scaffold1521 (121-230)||(1291-1401)
[»] scaffold0383 (1 HSPs)
scaffold0383 (121-230)||(16146-16256)
[»] scaffold0152 (2 HSPs)
scaffold0152 (121-230)||(29318-29428)
scaffold0152 (121-178)||(20426-20483)
[»] scaffold0095 (1 HSPs)
scaffold0095 (121-227)||(21759-21865)
[»] scaffold0839 (1 HSPs)
scaffold0839 (121-228)||(3114-3222)
[»] scaffold0472 (1 HSPs)
scaffold0472 (120-182)||(985-1047)
[»] scaffold0110 (1 HSPs)
scaffold0110 (125-230)||(38749-38857)
[»] scaffold0202 (1 HSPs)
scaffold0202 (120-182)||(15672-15734)
[»] scaffold0492 (1 HSPs)
scaffold0492 (193-230)||(12094-12131)
[»] scaffold0287 (1 HSPs)
scaffold0287 (200-229)||(10863-10892)


Alignment Details
Target: chr6 (Bit Score: 115; Significance: 2e-58; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 97 - 232
Target Start/End: Original strand, 7104486 - 7104621
Alignment:
Q  97 aaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaa 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||    
T  7104486 aaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagactttttttgttaaa 7104585  T
Q  197 aaagtcttttaaaatcctaatccaatacacccccct 232  Q
    ||||||||||||||||||||||||||||||||||||    
T  7104586 aaagtcttttaaaatcctaatccaatacacccccct 7104621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 97 - 232
Target Start/End: Complemental strand, 8790144 - 8790009
Alignment:
Q  97 aaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaa 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||    
T  8790144 aaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagactttttttgttaaa 8790045  T
Q  197 aaagtcttttaaaatcctaatccaatacacccccct 232  Q
    ||||||||||||||||||||||||||||||||||||    
T  8790044 aaagtcttttaaaatcctaatccaatacacccccct 8790009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 31068406 - 31068519
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||        |||||| ||||||||||||||||||||||    
T  31068406 aaagtcttttaaaatatcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 31068505  T
Q  221 atacacccccctaa 234  Q
    ||||||||||||||    
T  31068506 atacacccccctaa 31068519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 31896623 - 31896734
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||        |||||| ||||||||||||||||||||||    
T  31896623 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtattttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 31896722  T
Q  221 atacacccccct 232  Q
    ||||||||||||    
T  31896723 atacacccccct 31896734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 121 - 231
Target Start/End: Complemental strand, 30384280 - 30384170
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |        |||||| ||||||||||||||||||||||    
T  30384280 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaggctttttttattaaaatagtcttttaaaatcctaatcca 30384181  T
Q  221 atacacccccc 231  Q
    |||||||||||    
T  30384180 atacacccccc 30384170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 228
Target Start/End: Complemental strand, 14261659 - 14261552
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        ||||||  ||||||||||||| |||||||    
T  14261659 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaattgtcttttaaaatcataatcca 14261560  T
Q  221 atacaccc 228  Q
    ||||||||    
T  14261559 atacaccc 14261552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 4199696 - 4199586
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt-aaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||        |||||| ||| |||||||||||||||||    
T  4199696 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaagactttttttattaaaatagtgttttaaaatcctaatcc 4199597  T
Q  220 aatacaccccc 230  Q
    |||||||||||    
T  4199596 aatacaccccc 4199586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 121 - 233
Target Start/End: Complemental strand, 29864860 - 29864748
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||         | |||| ||||||||||||||  ||||||    
T  29864860 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcca 29864761  T
Q  221 atacaccccccta 233  Q
    |||||||||||||    
T  29864760 atacaccccccta 29864748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 7498076 - 7498138
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac 183  Q
    ||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||    
T  7498076 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaagac 7498138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 34774371 - 34774433
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac 183  Q
    |||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  34774371 aaagtcttttaaaatctcacagaatcaatacaatcttacacagtcttttaaaatcttaaagac 34774433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 27585293 - 27585232
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||    
T  27585293 aaagtcttttaaaatctcacagaatcaataaaatctcacacagtcttttaaaatcttaaaga 27585232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 3109458 - 3109349
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||         | |||| ||||||||||||||  ||||||    
T  3109458 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcca 3109359  T
Q  221 atacaccccc 230  Q
    ||||||||||    
T  3109358 atacaccccc 3109349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 6475851 - 6475790
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||    
T  6475851 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 6475790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 230
Target Start/End: Original strand, 7498157 - 7498195
Alignment:
Q  192 ttaaaaaagtcttttaaaatcctaatccaatacaccccc 230  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  7498157 ttaaaatagtcttttaaaatcctaatccaatacaccccc 7498195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 10262910 - 10262853
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctta 178  Q
    ||||| ||||||||||  ||| |||||||| |||| ||||||||||||||||||||||    
T  10262910 aaagtattttaaaatccaacataatcaatataatctcacaaagtcttttaaaatctta 10262853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 230
Target Start/End: Complemental strand, 656898 - 656861
Alignment:
Q  193 taaaaaagtcttttaaaatcctaatccaatacaccccc 230  Q
    |||||||||||||||||||| | |||||||||||||||    
T  656898 taaaaaagtcttttaaaatcatgatccaatacaccccc 656861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 233
Target Start/End: Complemental strand, 2300174 - 2300145
Alignment:
Q  204 tttaaaatcctaatccaatacaccccccta 233  Q
    ||||||||||||||||||||||||||||||    
T  2300174 tttaaaatcctaatccaatacaccccccta 2300145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 229
Target Start/End: Original strand, 23929380 - 23929409
Alignment:
Q  200 gtcttttaaaatcctaatccaatacacccc 229  Q
    ||||||||||||||||||||||||||||||    
T  23929380 gtcttttaaaatcctaatccaatacacccc 23929409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 5958032 - 5958088
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatct 176  Q
    |||| ||||||||||||   || |||||||| |||| ||||||||||||||||||||    
T  5958032 taaaatcttttaaaatccatcaaaatcaatataatcacacaaagtcttttaaaatct 5958088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 232
Target Start/End: Complemental strand, 6196965 - 6196937
Alignment:
Q  204 tttaaaatcctaatccaatacacccccct 232  Q
    |||||||||||||||||||||||||||||    
T  6196965 tttaaaatcctaatccaatacacccccct 6196937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 2e-58; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 97 - 232
Target Start/End: Original strand, 48207492 - 48207627
Alignment:
Q  97 aaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaa 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||    
T  48207492 aaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagactttttttgttaaa 48207591  T
Q  197 aaagtcttttaaaatcctaatccaatacacccccct 232  Q
    ||||||||||||||||||||||||||||||||||||    
T  48207592 aaagtcttttaaaatcctaatccaatacacccccct 48207627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 97 - 232
Target Start/End: Original strand, 48198909 - 48199044
Alignment:
Q  97 aaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaa 196  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||    
T  48198909 aaaagtcagtgtgataaatcccttaaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagactttttttgttaaa 48199008  T
Q  197 aaagtcttttaaaatcctaatccaatacacccccct 232  Q
    ||||||||||||||||||||||||||||||||||||    
T  48199009 aaagtcttttaaaatcctaatccaatacacccccct 48199044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 6313562 - 6313673
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        |||||| ||||||||||||||||||||||    
T  6313562 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 6313661  T
Q  221 atacacccccct 232  Q
    ||||||||||||    
T  6313662 atacacccccct 6313673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 121 - 231
Target Start/End: Original strand, 25613078 - 25613188
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        |||||| ||||||||||||||||||||||    
T  25613078 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 25613177  T
Q  221 atacacccccc 231  Q
    |||||||||||    
T  25613178 atacacccccc 25613188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 29395646 - 29395537
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        |||||| ||||||||||||||||||||||    
T  29395646 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 29395547  T
Q  221 atacaccccc 230  Q
    ||||||||||    
T  29395546 atacaccccc 29395537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 121 - 230
Target Start/End: Original strand, 51702580 - 51702689
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        |||||| |||||||||||||||||||||     
T  51702580 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcct 51702679  T
Q  221 atacaccccc 230  Q
    ||||||||||    
T  51702680 atacaccccc 51702689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 20111790 - 20111681
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||        |||||| |||||||||||||| ||||| |    
T  20111790 aaagtcttttaaaatctcacagaatcagtacaatctcacaaagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcgtaatcaa 20111691  T
Q  221 atacaccccc 230  Q
    ||||||||||    
T  20111690 atacaccccc 20111681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 28386667 - 28386551
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||| |||||||| |||| |||| ||||||||||||||||||||||         |||||| |||||||||||||||||||||    
T  28386667 aaagtcttttaaaatctcacaaaatcaatagaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatcc 28386568  T
Q  220 aatacacccccctaaga 236  Q
    |||||||||||||||||    
T  28386567 aatacacccccctaaga 28386551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 49231970 - 49232078
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        ||||||  |||||||||||||||||||||    
T  49231970 aaagtattttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaattgtcttttaaaatcctaatcca 49232069  T
Q  221 atacacccc 229  Q
    |||||||||    
T  49232070 atacacccc 49232078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 121 - 231
Target Start/End: Complemental strand, 9321728 - 9321617
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||         |||||| ||||||||||||||| ||| |    
T  9321728 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcccaattc 9321629  T
Q  220 aatacacccccc 231  Q
    ||||||||||||    
T  9321628 aatacacccccc 9321617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 29220098 - 29220160
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac 183  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  29220098 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagac 29220160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 5494366 - 5494255
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||| ||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| ||        |||||| | ||||||||||| ||||| ||    
T  5494366 aaagtgttttaaaatctcacataatcaatacaatctcacagagtcttttaaaatcttaaatacttcttttattaaaataatcttttaaaattctaattca 5494267  T
Q  221 atacacccccct 232  Q
    ||||||||||||    
T  5494266 atacacccccct 5494255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 38535365 - 38535254
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||| |||||||||||||||  ||| || |||||||||||||||| ||        |||||| | ||||||||||||||||||||    
T  38535365 aaagtcttttaaaatctcatagaatcaatacaatctaacacagacttttaaaatcttaaatactttttttattaaaataatcttttaaaatcctaatcca 38535266  T
Q  221 atacacccccct 232  Q
    ||||| ||||||    
T  38535265 atacaaccccct 38535254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 38557583 - 38557472
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||| |||||||||||||||  ||| || |||||||||||||||| ||        |||||| | ||||||||||||||||||||    
T  38557583 aaagtcttttaaaatctcatagaatcaatacaatctaacacagacttttaaaatcttaaatactttttttattaaaataatcttttaaaatcctaatcca 38557484  T
Q  221 atacacccccct 232  Q
    ||||| ||||||    
T  38557483 atacaaccccct 38557472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 45273547 - 45273653
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||| | |||||||| |||| || | ||||||||||||||||||| ||        |||||| | ||||||||||||||||||||    
T  45273547 aaagtcttttaaaatctcataaaatcaatataatctcatatagtcttttaaaatcttaaaaactttttttattaaaataatcttttaaaatcctaatcca 45273646  T
Q  221 atacacc 227  Q
    |||||||    
T  45273647 atacacc 45273653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 230
Target Start/End: Original strand, 46328952 - 46329063
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac---nnnnnnngttaaaaaagtcttttaaaatcctaat 217  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||| ||||| |||| ||           |||||| |||||||||||||||||||    
T  46328952 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttgaaatc-taaaaacatttttatttattaaaatagtcttttaaaatcctaat 46329050  T
Q  218 ccaatacaccccc 230  Q
    |||||||||||||    
T  46329051 ccaatacaccccc 46329063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 52706366 - 52706427
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||    
T  52706366 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 52706427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 14389400 - 14389456
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt 177  Q
    |||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  14389400 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 14389456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 230
Target Start/End: Original strand, 45319453 - 45319562
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||| | || |||||||||||||| |||||||||||||||||||| ||||         | |||| ||||||||||||||  ||||||    
T  45319453 aaagtcttttaaaatcccgcaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcca 45319552  T
Q  221 atacaccccc 230  Q
    ||||||||||    
T  45319553 atacaccccc 45319562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 39758861 - 39758916
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatct 176  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||    
T  39758861 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatct 39758916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 39764215 - 39764270
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatct 176  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||    
T  39764215 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatct 39764270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 51826069 - 51826008
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||  |||| ||||||||||||| ||||||||||||||||||||| ||||    
T  51826069 aaagtcttttaaaatgccacaaaatcaatacaatcacacaaagtcttttaaaatctttaaga 51826008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 26881920 - 26881863
Alignment:
Q  125 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||| |||| |||||||||||||| |||||||||| ||||||||| ||||    
T  26881920 tcttttaaaatcccacaaaatcaatacaatccaacaaagtcttctaaaatctttaaga 26881863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 45535735 - 45535796
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||| |||| |||||||||||||| ||||| |||| ||||||||| ||||    
T  45535735 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaaatcttctaaaatcttcaaga 45535796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 232
Target Start/End: Complemental strand, 1923131 - 1923093
Alignment:
Q  194 aaaaaagtcttttaaaatcctaatccaatacacccccct 232  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  1923131 aaaatagtcttttaaaatcctaatccaatacacccccct 1923093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 25830459 - 25830425
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatc 155  Q
    |||||||||||||||||||||||||||||||||||    
T  25830459 aaagtcttttaaaatctcacagaatcaatacaatc 25830425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 15835374 - 15835411
Alignment:
Q  193 taaaaaagtcttttaaaatcctaatccaatacaccccc 230  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  15835374 taaaatagtcttttaaaatcctaatccaatacaccccc 15835411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 229
Target Start/End: Complemental strand, 48176683 - 48176646
Alignment:
Q  192 ttaaaaaagtcttttaaaatcctaatccaatacacccc 229  Q
    |||||| |||||||||||||||||||||||||||||||    
T  48176683 ttaaaatagtcttttaaaatcctaatccaatacacccc 48176646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 229
Target Start/End: Original strand, 18799411 - 18799443
Alignment:
Q  197 aaagtcttttaaaatcctaatccaatacacccc 229  Q
    |||||||||||||||||||||||||||||||||    
T  18799411 aaagtcttttaaaatcctaatccaatacacccc 18799443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 25830397 - 25830357
Alignment:
Q  192 ttaaaaaagtcttttaaaatcctaatccaatacacccccct 232  Q
    |||||| ||||||||||||||||||| ||||||||||||||    
T  25830397 ttaaaatagtcttttaaaatcctaattcaatacacccccct 25830357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 235
Target Start/End: Original strand, 35280339 - 35280370
Alignment:
Q  204 tttaaaatcctaatccaatacacccccctaag 235  Q
    ||||||||||||||||||||||||||||||||    
T  35280339 tttaaaatcctaatccaatacacccccctaag 35280370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 19894801 - 19894863
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||| |||||||||  |||| |||||||| |||| |||||| |||||||||||||| ||||    
T  19894801 taaagttttttaaaattccacaaaatcaatataatcacacaaaatcttttaaaatctttaaga 19894863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 234
Target Start/End: Complemental strand, 45759483 - 45759453
Alignment:
Q  204 tttaaaatcctaatccaatacacccccctaa 234  Q
    |||||||||||||||||||||||||||||||    
T  45759483 tttaaaatcctaatccaatacacccccctaa 45759453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 230
Target Start/End: Complemental strand, 49197790 - 49197760
Alignment:
Q  200 gtcttttaaaatcctaatccaatacaccccc 230  Q
    |||||||||||||||||||||||||||||||    
T  49197790 gtcttttaaaatcctaatccaatacaccccc 49197760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 1923477 - 1923416
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    ||||||||||||||||  ||| | |||||| |||| |||||| |||||||||||||| ||||    
T  1923477 aaagtcttttaaaatccaacaaagtcaatataatctcacaaaatcttttaaaatcttcaaga 1923416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 230
Target Start/End: Original strand, 47781325 - 47781354
Alignment:
Q  201 tcttttaaaatcctaatccaatacaccccc 230  Q
    ||||||||||||||||||||||||||||||    
T  47781325 tcttttaaaatcctaatccaatacaccccc 47781354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 47784339 - 47784302
Alignment:
Q  196 aaaagtcttttaaaatcctaatccaatacaccccccta 233  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  47784339 aaaagtcttttaaaatcttaatccaatacaccctccta 47784302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 232
Target Start/End: Complemental strand, 6303800 - 6303772
Alignment:
Q  204 tttaaaatcctaatccaatacacccccct 232  Q
    |||||||||||||||||||||||||||||    
T  6303800 tttaaaatcctaatccaatacacccccct 6303772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 8e-55; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 97 - 234
Target Start/End: Original strand, 38234565 - 38234702
Alignment:
Q  97 aaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaa 196  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||       ||||||    
T  38234565 aaaagtcagtttgataaatcccttaaagtcttttaaaatcttacagaatcaatacaatcccacaaagtcttttaaaatcttaaagactttttttgttaaa 38234664  T
Q  197 aaagtcttttaaaatcctaatccaatacacccccctaa 234  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38234665 aaagtcttttaaaatcctaatccaatacacccccctaa 38234702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 27769050 - 27769161
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        |||||| ||||||||||||||||||||||    
T  27769050 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 27769149  T
Q  221 atacacccccct 232  Q
    ||||||||||||    
T  27769150 atacacccccct 27769161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 48262061 - 48262172
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||        |||||| ||||||||||||||||||||||    
T  48262061 aaagtcttttaaaatctcacagaatcaatacaatttcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 48262160  T
Q  221 atacacccccct 232  Q
    ||||||||||||    
T  48262161 atacacccccct 48262172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 54342133 - 54342247
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        |||||| ||||||||||||| ||||||||    
T  54342133 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaattctaatcca 54342232  T
Q  221 atacacccccctaag 235  Q
    |||||||||| ||||    
T  54342233 atacacccccttaag 54342247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 125 - 230
Target Start/End: Complemental strand, 32683239 - 32683134
Alignment:
Q  125 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatccaatac 224  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        |||||| ||||||||||||||||||||||||||    
T  32683239 tcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatac 32683140  T
Q  225 accccc 230  Q
    ||||||    
T  32683139 accccc 32683134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 50019177 - 50019290
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||        |||||| ||||||||||||| ||||||||    
T  50019177 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaattttaaagactttttttattaaaatagtcttttaaaattctaatcca 50019276  T
Q  221 atacacccccctaa 234  Q
    ||||||||||||||    
T  50019277 atacacccccctaa 50019290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 5442379 - 5442488
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||| ||||||||||||| |||  ||||||||||||||||||||||        |||||| ||||||||||||||||||||||    
T  5442379 aaagtcttttaaaatctcacaaaatcaatacaatctcac--agtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 5442476  T
Q  221 atacacccccct 232  Q
    ||||||||||||    
T  5442477 atacacccccct 5442488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 23988183 - 23988291
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||         |||||| ||||||||||||||||||||||    
T  23988183 aaagtcttttaaaatctcacagaatcaatacaatctcacatattcttttaaaatcttaaagattttttttattaaaatagtcttttaaaatcctaatcca 23988282  T
Q  221 atacacccc 229  Q
    |||||||||    
T  23988283 atacacccc 23988291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 228
Target Start/End: Complemental strand, 29649238 - 29649131
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||        |||||| ||||||||||||||||||||||    
T  29649238 aaagtcttttaaaatctcatagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 29649139  T
Q  221 atacaccc 228  Q
    || |||||    
T  29649138 attcaccc 29649131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 228
Target Start/End: Original strand, 32323055 - 32323163
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||         |||||| |||||||||||||||||||||    
T  32323055 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatcc 32323154  T
Q  220 aatacaccc 228  Q
    |||||||||    
T  32323155 aatacaccc 32323163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 48532029 - 48531925
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||||||||||||||||||||||  ||| | ||||||||||||||||||||        |||||| |||||||||||||||||||| |    
T  48532029 aaagtcttttaaaatctcacagaatcaatacaatcttacagaatcttttaaaatcttaaagacttattttattaaaatagtcttttaaaatcctaatcaa 48531930  T
Q  221 ataca 225  Q
    |||||    
T  48531929 ataca 48531925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 41726092 - 41726198
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||| ||||||||||||| || | | ||||||||||||||||||||        |||||| |||||||||||||| |||||||    
T  41726092 aaagtcttttaaaatctcacataatcaatacaatctcaaacaatcttttaaaatcttaaagacattttttattaaaatagtcttttaaaatcataatcca 41726191  T
Q  221 atacacc 227  Q
    |||||||    
T  41726192 atacacc 41726198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 49500748 - 49500639
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||| ||||||||||||||||||| | || |||||||||||||||||||||         |||||| ||||||| ||||| ||||||||    
T  49500748 aaagtcttttaaaatttcacagaatcaatacaatctcgcacagtcttttaaaatcttaaagattttatttattaaaatagtctttcaaaattctaatcca 49500649  T
Q  221 atacaccccc 230  Q
    ||||||||||    
T  49500648 atacaccccc 49500639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 49834082 - 49833973
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatc 218  Q
    |||||||||||||||||||||| ||||||||||||| |||| | ||||||||||||||||||||         |||||| ||||||||||||||||||||    
T  49834082 taaagtcttttaaaatctcacaaaatcaatacaatctcacataatcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatc 49833983  T
Q  219 caatacaccc 228  Q
    ||||| ||||    
T  49833982 caatataccc 49833973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 5801691 - 5801753
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac 183  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  5801691 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatctcaaagac 5801753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 37827644 - 37827523
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-----nnnnnnngttaaaaaagtcttttaaaatccta 215  Q
    |||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||             |||||| ||||||||||||| |||    
T  37827644 aaagtcatttaaaatctcagagaatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttttttattaaaatagtcttttaaaattcta 37827545  T
Q  216 atccaatacacccccctaagaa 237  Q
    |||||||||||| |||||||||    
T  37827544 atccaatacacctccctaagaa 37827523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 42315860 - 42315971
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||| |||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||         | |||| ||||||||||||||  ||||||    
T  42315860 aaagtgttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcca 42315959  T
Q  221 atacacccccct 232  Q
    ||||||||||||    
T  42315960 atacacccccct 42315971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 51321842 - 51321904
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac 183  Q
    ||||||||||||||| ||||||||||||||||||| |||| |||| |||||||||||||||||    
T  51321842 aaagtcttttaaaatttcacagaatcaatacaatctcacatagtcgtttaaaatcttaaagac 51321904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 30966293 - 30966184
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||| |||||||||| |||| || | | ||||||||||||||||||||        |||||| | |||||||||||| |||||||    
T  30966293 aaagtcttttaaaatctcatagaatcaatataatctcatacaatcttttaaaatcttaaagacattttttattaaaataatcttttaaaatcataatcca 30966194  T
Q  221 atacaccccc 230  Q
    ||| ||||||    
T  30966193 atataccccc 30966184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 7808976 - 7809037
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    ||||||||||||||||  ||| |||||||||||||| |||||||||||||||||||| ||||    
T  7808976 aaagtcttttaaaatcctacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 7809037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 7820927 - 7820988
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    ||||||||||||||||  ||| |||||||||||||| |||||||||||||||||||| ||||    
T  7820927 aaagtcttttaaaatcctacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 7820988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 8583105 - 8583048
Alignment:
Q  125 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||    
T  8583105 tcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 8583048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 53272823 - 53272880
Alignment:
Q  119 ttaaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatct 176  Q
    ||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||||    
T  53272823 ttaaagtcttttaaaatctcataaaatcaatagaatcacacaaagtcttttaaaatct 53272880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 52110237 - 52110299
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||| ||||||||||||||| | ||||||||||||| |||||| |||||||||||||| ||||    
T  52110237 taaaatcttttaaaatctcaaaaaatcaatacaatcgcacaaaatcttttaaaatctttaaga 52110299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 3434931 - 3434874
Alignment:
Q  125 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||  |||| |||||||||||||| |||||||||||||||||||| ||||    
T  3434931 tcttttaaaattccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 3434874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 42217555 - 42217495
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||| |||| |||||||||||||| |||||||| ||||||||||| ||||    
T  42217555 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtc-tttaaaatcttcaaga 42217495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 54852695 - 54852658
Alignment:
Q  195 aaaaagtcttttaaaatcctaatccaatacacccccct 232  Q
    ||||||||||||||||||||||||||||||||||||||    
T  54852695 aaaaagtcttttaaaatcctaatccaatacacccccct 54852658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 37916778 - 37916844
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcc-----cacaaagtcttttaaaatcttaaaga 182  Q
    ||||||||||||||||||||| |||||||||||| |     |||| |||||||||||||||||||||    
T  37916778 aaagtcttttaaaatctcacaaaatcaatacaatacaatctcacacagtcttttaaaatcttaaaga 37916844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 16019913 - 16019946
Alignment:
Q  200 gtcttttaaaatcctaatccaatacaccccccta 233  Q
    ||||||||||||||||||||||||||||||||||    
T  16019913 gtcttttaaaatcctaatccaatacaccccccta 16019946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 25936902 - 25936959
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt 177  Q
    |||||| ||||||||||| | | ||||||||||||  |||||||||||||||||||||    
T  25936902 taaagtattttaaaatcttaaaaaatcaatacaattacacaaagtcttttaaaatctt 25936959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 5105007 - 5105046
Alignment:
Q  200 gtcttttaaaatcctaatccaatacacccccctaagaataa 240  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  5105007 gtcttttaaaatcctaatccaataca-ccccctaagaataa 5105046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 37916865 - 37916905
Alignment:
Q  192 ttaaaaaagtcttttaaaatcctaatccaatacacccccct 232  Q
    |||||| ||||| ||||||||||||||||||||||||||||    
T  37916865 ttaaaatagtctcttaaaatcctaatccaatacacccccct 37916905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 56399018 - 56399074
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt 177  Q
    ||||| ||| ||||||||||| |||||||| ||| | ||||||||||||||||||||    
T  56399018 aaagtttttaaaaatctcacaaaatcaataaaattcaacaaagtcttttaaaatctt 56399074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 234
Target Start/End: Complemental strand, 24130486 - 24130456
Alignment:
Q  204 tttaaaatcctaatccaatacacccccctaa 234  Q
    |||||||||||||||||||||||||||||||    
T  24130486 tttaaaatcctaatccaatacacccccctaa 24130456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 28484862 - 28484916
Alignment:
Q  125 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaa 179  Q
    ||||||||||||||||| ||||||||||||  |||| | ||||||||||| ||||    
T  28484862 tcttttaaaatctcacaaaatcaatacaatttcacacaatcttttaaaattttaa 28484916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 47686872 - 47686914
Alignment:
Q  194 aaaaaagtcttttaaaatcctaatccaatacacccccctaaga 236  Q
    |||| ||||||||||||||  ||||||||||||||||||||||    
T  47686872 aaaatagtcttttaaaatctcaatccaatacacccccctaaga 47686914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 230
Target Start/End: Original strand, 51321924 - 51321962
Alignment:
Q  192 ttaaaaaagtcttttaaaatcctaatccaatacaccccc 230  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  51321924 ttaaaatagtattttaaaatcctaatccaatacaccccc 51321962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 44647699 - 44647756
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt 177  Q
    |||||||| | |||||| |||| |||||| |||||| ||||||||||||| |||||||    
T  44647699 taaagtctatcaaaatcccacaaaatcaacacaatcacacaaagtcttttcaaatctt 44647756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 232
Target Start/End: Original strand, 22202716 - 22202744
Alignment:
Q  204 tttaaaatcctaatccaatacacccccct 232  Q
    |||||||||||||||||||||||||||||    
T  22202716 tttaaaatcctaatccaatacacccccct 22202744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 231
Target Start/End: Complemental strand, 37369458 - 37369430
Alignment:
Q  203 ttttaaaatcctaatccaatacacccccc 231  Q
    |||||||||||||||||||||||||||||    
T  37369458 ttttaaaatcctaatccaatacacccccc 37369430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 54510611 - 54510651
Alignment:
Q  194 aaaaaagtcttttaaaatcctaatccaatacacccccctaa 234  Q
    |||| ||||||||||||||  ||||||||||||||||||||    
T  54510611 aaaatagtcttttaaaatctcaatccaatacacccccctaa 54510651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 4e-41; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 97 - 226
Target Start/End: Complemental strand, 46035582 - 46035452
Alignment:
Q  97 aaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt-aaagacnnnnnnngttaa 195  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||       |||||    
T  46035582 aaaagtcagtgtgataaatcccttaaagtcttttaaaatctcacagaatcaatacaattccacaaagtcttttaaaatcttaaaaaactttttttgttaa 46035483  T
Q  196 aaaagtcttttaaaatcctaatccaatacac 226  Q
    || ||||||||||||||||||||||||||||    
T  46035482 aatagtcttttaaaatcctaatccaatacac 46035452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 23102277 - 23102388
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        |||||| ||||||||||||||||||||||    
T  23102277 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 23102376  T
Q  221 atacacccccct 232  Q
    ||||||||||||    
T  23102377 atacacccccct 23102388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 28343296 - 28343410
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        |||||| ||||||||||||||| ||||||    
T  28343296 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcccaatcca 28343395  T
Q  221 atacacccccctaag 235  Q
    |||||||||||||||    
T  28343396 atacacccccctaag 28343410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 26183056 - 26183134
Alignment:
Q  97 aaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatc 175  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26183056 aaaagtcagtgtgataaatcccttaaagtcttttaaaatctcacataatcaatacaatcccacaaagtcttttaaaatc 26183134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 12893242 - 12893159
Alignment:
Q  97 aaaagtcagtatgataaatcccttaaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaa 180  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||    
T  12893242 aaaagtcagtgtgataaatcccttaaagtcttttaaaatctcatagaatcaatacaatctcacaaagtcttttaaaattttaaa 12893159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 37971615 - 37971500
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    |||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||        |||||| |||||||||||||||||||||    
T  37971615 taaagtcttttaaaatctcacagaatcaatacaatctcacacggtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcc 37971516  T
Q  220 aatacacccccctaag 235  Q
    |||||||  |||||||    
T  37971515 aatacacttccctaag 37971500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 121 - 230
Target Start/End: Original strand, 3023911 - 3024019
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||        |||||| ||||||||||||||||||||||    
T  3023911 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaaactttttta-ttaaaatagtcttttaaaatcctaatcca 3024009  T
Q  221 atacaccccc 230  Q
    ||||||||||    
T  3024010 atacaccccc 3024019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 7994142 - 7994255
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||        |||||| | ||||||||||||||||||||    
T  7994142 aaagtcttttaaaatcttacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttctttattaaaatactcttttaaaatcctaatcca 7994241  T
Q  221 atacacccccctaa 234  Q
    ||||| ||||||||    
T  7994242 atacaaccccctaa 7994255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 18839280 - 18839388
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||        |||||| | ||||||||||||||||||||    
T  18839280 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaagactttttttattaaaataatcttttaaaatcctaatcca 18839379  T
Q  221 atacacccc 229  Q
    |||||||||    
T  18839380 atacacccc 18839388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 29614013 - 29613901
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||         |||||| |||||||||||||||||||||    
T  29614013 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatcc 29613914  T
Q  220 aatacacccccct 232  Q
    |||||||| ||||    
T  29613913 aatacacctccct 29613901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 30823580 - 30823684
Alignment:
Q  128 tttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatccaatacacc 227  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        |||||| ||||||||||||||||||| |||||||||    
T  30823580 tttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaattcaatacacc 30823679  T
Q  228 cccct 232  Q
    |||||    
T  30823680 cccct 30823684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 233
Target Start/End: Original strand, 510632 - 510746
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac--nnnnnnngttaaaaaagtcttttaaaatcctaatc 218  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||          |||||| ||||||||||||||| ||||    
T  510632 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttttattaaaatagtcttttaaaatcccaatc 510731  T
Q  219 caatacaccccccta 233  Q
    |||||||||||||||    
T  510732 caatacaccccccta 510746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 9881508 - 9881396
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||         ||||||  |||||||||||||||||||||    
T  9881508 aaagtcttttaaaatctcatagaatcaatacaatctcacacagtcttttaaaatcttaaaga-attttttattaaaattgtcttttaaaatcctaatcca 9881410  T
Q  221 atacacccccctaa 234  Q
    ||||||||||||||    
T  9881409 atacacccccctaa 9881396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 39785082 - 39785195
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac--nnnnnnngttaaaaaagtcttttaaaatcctaatc 218  Q
    ||||||||||||||| ||||||||||||||||||| | || ||||||||||||||||||||||          |||||| ||||||||||||||||||||    
T  39785082 aaagtcttttaaaatttcacagaatcaatacaatctcgcacagtcttttaaaatcttaaagactttttttttattaaaatagtcttttaaaatcctaatc 39785181  T
Q  219 caatacacccccct 232  Q
    ||||||||||||||    
T  39785182 caatacacccccct 39785195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 29893942 - 29894051
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||| ||||||||||||| |||| | ||||||||||||||||||||         |||||| |||||||||||||||||||||    
T  29893942 aaagtcttttaaaatctcacaaaatcaatacaatctcacacaatcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatcc 29894041  T
Q  220 aatacacccc 229  Q
    ||||||||||    
T  29894042 aatacacccc 29894051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 228
Target Start/End: Original strand, 12741359 - 12741467
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||         |||||| |||||||||||||| ||||||    
T  12741359 aaagtcttttaaaatctcacataatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcttaatcc 12741458  T
Q  220 aatacaccc 228  Q
    |||||||||    
T  12741459 aatacaccc 12741467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 48136470 - 48136361
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| | | |||||||||||| ||||         |||||| ||||||||||||||||||||||    
T  48136470 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatattttaaaatcttgaagattttttttattaaaatagtcttttaaaatcctaatcca 48136371  T
Q  221 atacaccccc 230  Q
    ||| ||||||    
T  48136370 atataccccc 48136361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 39029039 - 39029147
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||| |||||||||||||||||||  ||| | | ||||||||||||||||||        |||||| | ||||||||||||||||||||    
T  39029039 aaagtcttttaaaatttcacagaatcaatacaatcttacacaatattttaaaatcttaaagactttttttattaaaataatcttttaaaatcctaatcca 39029138  T
Q  221 atacacccc 229  Q
    |||||||||    
T  39029139 atacacccc 39029147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 32884739 - 32884801
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac 183  Q
    ||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  32884739 aaagtcttttaaaatctcacagaatcaatacaatttcacacagtcttttaaaatcttaaagac 32884801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 35089205 - 35089144
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  35089205 aaagtcttttaaaatctcacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 35089144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 40459941 - 40459830
Alignment:
Q  121 aaagtcttttaaaatctcacagaatc-aatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatc 218  Q
    |||||||||||||||||||||||||| ||||||||| |||  ||||||||||||||||||||||         |||||| ||||||||||||| ||||||    
T  40459941 aaagtcttttaaaatctcacagaatcaaatacaatctcac--agtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaattctaatc 40459844  T
Q  219 caatacacccccct 232  Q
    ||||||||||||||    
T  40459843 caatacacccccct 40459830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 152839 - 152952
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||  ||| |||||||||||||| |||||||||||||||||||| ||||         | |||| ||||||||||||||  ||||||    
T  152839 aaagtcttttaaaatcctacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcca 152938  T
Q  221 atacacccccctaa 234  Q
    ||||||||||||||    
T  152939 atacacccccctaa 152952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 33891455 - 33891401
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatc 175  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  33891455 aaagtcttttaaaatctcacagaatcaatacaatctcacatagtcttttaaaatc 33891401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 47912632 - 47912521
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||         | |||| ||||||||||||||  ||||||    
T  47912632 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcca 47912533  T
Q  221 atacacccccct 232  Q
    ||| ||||||||    
T  47912532 atatacccccct 47912521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 12252494 - 12252433
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||    
T  12252494 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 12252433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 33475515 - 33475576
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    ||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||| ||||    
T  33475515 aaagtcttttaaaatttcacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 33475576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 43056796 - 43056735
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||    
T  43056796 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 43056735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 230
Target Start/End: Original strand, 30111771 - 30111880
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||| |||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||         | |||| ||||||||||||||  ||||||    
T  30111771 aaagttttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatcca 30111870  T
Q  221 atacaccccc 230  Q
    ||||||||||    
T  30111871 atacaccccc 30111880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 121 - 230
Target Start/End: Original strand, 21068342 - 21068453
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac--nnnnnnngttaaaaaagtcttttaaaatcctaatc 218  Q
    ||||| ||||||||||| ||| ||||||||||||| |||| |||| |||||||| ||||||||          |||||| ||||||||||||||||||||    
T  21068342 aaagttttttaaaatctaacataatcaatacaatctcacacagtcatttaaaattttaaagactttttttttattaaaatagtcttttaaaatcctaatc 21068441  T
Q  219 caatacaccccc 230  Q
    ||||||||||||    
T  21068442 caatacaccccc 21068453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 37328812 - 37328871
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaa 180  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||||||    
T  37328812 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtccttttaaatcttaaa 37328871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 44256001 - 44255946
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatc 175  Q
    |||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  44256001 taaagtcttttaaaatctcagagaatcaatacaatctcacacagtcttttaaaatc 44255946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 33383627 - 33383681
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatc 175  Q
    |||||||||||||||||||||||||||||||||||  ||| ||||||||||||||    
T  33383627 aaagtcttttaaaatctcacagaatcaatacaatcttacacagtcttttaaaatc 33383681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 27417756 - 27417695
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||| |||| |||||||||||||  |||||||||||||||||||| ||||    
T  27417756 aaagtcttttaaaatcccacaaaatcaatacaatctaacaaagtcttttaaaatcttcaaga 27417695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 34114649 - 34114540
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||   || ||||||||||||| ||||||||||||||||||||| ||||        |  |||| ||||||| ||||||| ||||||    
T  34114649 aaagtcttttaaaatccttcaaaatcaatacaatcacacaaagtcttttaaaatctttaagattttttctgccaaaacagtctttcaaaatcccaatcca 34114550  T
Q  221 atacaccccc 230  Q
    ||||||||||    
T  34114549 atacaccccc 34114540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 28034341 - 28034286
Alignment:
Q  128 tttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac 183  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||||| ||||||||    
T  28034341 tttaaaatctcacaaaatcaatacaatctcacacagtcttttaaaattttaaagac 28034286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 42677356 - 42677294
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    ||||||||||||||||  |||| ||||||||||||| |||||| |||||||||||||| ||||    
T  42677356 taaagtcttttaaaattccacaaaatcaatacaatcacacaaaatcttttaaaatctttaaga 42677294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 26183119 - 26183156
Alignment:
Q  197 aaagtcttttaaaatcctaatccaatacacccccctaa 234  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26183119 aaagtcttttaaaatcctaatccaatacacccccctaa 26183156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 47067686 - 47067720
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatc 155  Q
    |||||||||||||||||||||||||||||||||||    
T  47067686 aaagtcttttaaaatctcacagaatcaatacaatc 47067720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 47879770 - 47879803
Alignment:
Q  201 tcttttaaaatcctaatccaatacacccccctaa 234  Q
    ||||||||||||||||||||||||||||||||||    
T  47879770 tcttttaaaatcctaatccaatacacccccctaa 47879803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 47914848 - 47914881
Alignment:
Q  201 tcttttaaaatcctaatccaatacacccccctaa 234  Q
    ||||||||||||||||||||||||||||||||||    
T  47914848 tcttttaaaatcctaatccaatacacccccctaa 47914881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 33383668 - 33383704
Alignment:
Q  199 agtcttttaaaatcctaatccaatacacccccctaag 235  Q
    |||||||||||||||||||||||||||||||| ||||    
T  33383668 agtcttttaaaatcctaatccaatacacccccttaag 33383704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 230
Target Start/End: Complemental strand, 33891414 - 33891383
Alignment:
Q  199 agtcttttaaaatcctaatccaatacaccccc 230  Q
    ||||||||||||||||||||||||||||||||    
T  33891414 agtcttttaaaatcctaatccaatacaccccc 33891383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 235
Target Start/End: Complemental strand, 44343026 - 44342995
Alignment:
Q  204 tttaaaatcctaatccaatacacccccctaag 235  Q
    ||||||||||||||||||||||||||||||||    
T  44343026 tttaaaatcctaatccaatacacccccctaag 44342995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 44121168 - 44121134
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatc 155  Q
    ||||||||||||||||||||| |||||||||||||    
T  44121168 aaagtcttttaaaatctcacaaaatcaatacaatc 44121134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 229
Target Start/End: Original strand, 3635193 - 3635222
Alignment:
Q  200 gtcttttaaaatcctaatccaatacacccc 229  Q
    ||||||||||||||||||||||||||||||    
T  3635193 gtcttttaaaatcctaatccaatacacccc 3635222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 232
Target Start/End: Complemental strand, 28034262 - 28034229
Alignment:
Q  199 agtcttttaaaatcctaatccaatacacccccct 232  Q
    ||||||||||||||||||| ||||||||||||||    
T  28034262 agtcttttaaaatcctaattcaatacacccccct 28034229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 30889239 - 30889186
Alignment:
Q  129 ttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    ||||||||||| |||||||| | ||||| || |||||||||||||||| |||||    
T  30889239 ttaaaatctcatagaatcaacataatcctaccaagtcttttaaaatctcaaaga 30889186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 229
Target Start/End: Original strand, 37328884 - 37328921
Alignment:
Q  192 ttaaaaaagtcttttaaaatcctaatccaatacacccc 229  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  37328884 ttaaaatagtcttttaaaattctaatccaatacacccc 37328921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 46405338 - 46405297
Alignment:
Q  192 ttaaaaaagtcttttaaaatcctaatccaatacaccccccta 233  Q
    |||||| |||||||||||||||||||| ||||||||| ||||    
T  46405338 ttaaaatagtcttttaaaatcctaatctaatacaccctccta 46405297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 32884816 - 32884856
Alignment:
Q  192 ttaaaaaagtcttttaaaatcctaatccaatacacccccct 232  Q
    |||||| |||||||||||||| ||||||||||||| |||||    
T  32884816 ttaaaatagtcttttaaaatcttaatccaatacactcccct 32884856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 3e-36; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 26789771 - 26789885
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        |||||| ||||||||||||||||||||||    
T  26789771 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 26789870  T
Q  221 atacacccccctaag 235  Q
    |||||||||||||||    
T  26789871 atacacccccctaag 26789885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 18178258 - 18178371
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        |||||| ||||||||||||||||||||||    
T  18178258 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 18178357  T
Q  221 atacacccccctaa 234  Q
    ||||||||||||||    
T  18178358 atacacccccctaa 18178371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 25289141 - 25289252
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||         |||||| ||||||||||||||||||||||    
T  25289141 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagattttttttattaaaatagtcttttaaaatcctaatcca 25289240  T
Q  221 atacacccccct 232  Q
    ||||||||||||    
T  25289241 atacacccccct 25289252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 28845564 - 28845672
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||        |||||| ||||||||||||||||||||||    
T  28845564 aaagtcttttaaaatctcacagaatcaatacaatctcacatagtctttaaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 28845663  T
Q  221 atacacccc 229  Q
    |||||||||    
T  28845664 atacacccc 28845672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 7027891 - 7028002
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        |||||| | ||||||||||||||||||||    
T  7027891 aaagtctattaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaataatcttttaaaatcctaatcca 7027990  T
Q  221 atacacccccct 232  Q
    ||| ||| ||||    
T  7027991 ataaacctccct 7028002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 33136580 - 33136697
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac---nnnnnnngttaaaaaagtcttttaaaatcctaat 217  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||           ||||||  ||||||||||||||||||    
T  33136580 aaagtcttttaaaatctcatagaatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttttattaaaattgtcttttaaaatcctaat 33136679  T
Q  218 ccaatacacccccctaag 235  Q
    ||||||||||||||||||    
T  33136680 ccaatacacccccctaag 33136697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 3464572 - 3464682
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    |||||||||||||||||||||| |||||||| ||||  ||| ||||||||||||||||||||||        |||||| |||||| ||||||||||||||    
T  3464572 taaagtcttttaaaatctcacaaaatcaatagaatctgacacagtcttttaaaatcttaaagacttttttaattaaaatagtcttgtaaaatcctaatcc 3464671  T
Q  220 aatacaccccc 230  Q
    |||||||||||    
T  3464672 aatacaccccc 3464682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 13832777 - 13832716
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  13832777 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 13832716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 29941867 - 29941981
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||         | |||| ||||||||||||||  ||||||    
T  29941867 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcca 29941966  T
Q  221 atacacccccctaag 235  Q
    |||||||||||||||    
T  29941967 atacacccccctaag 29941981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 230
Target Start/End: Original strand, 45547893 - 45548002
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||         | |||| ||||||||||||||  ||||||    
T  45547893 aaagtcttttaaaatctcacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcca 45547992  T
Q  221 atacaccccc 230  Q
    ||||||||||    
T  45547993 atacaccccc 45548002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 43079472 - 43079576
Alignment:
Q  124 gtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatccaat 222  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||         |||||| ||||||||||||| ||||||||||    
T  43079472 gtcttttaaaatctcacataatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaattctaatccaat 43079571  T
Q  223 acacc 227  Q
    |||||    
T  43079572 acacc 43079576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 7487065 - 7486952
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||         | ||||  |||||||||||||  ||||||    
T  7487065 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacggtcttttaaaatctcaatcca 7486966  T
Q  221 atacacccccctaa 234  Q
    ||||||||||||||    
T  7486965 atacacccccctaa 7486952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 10658423 - 10658525
Alignment:
Q  128 tttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaa-gacnnnnnnngttaaaaaagtcttttaaaatcctaatccaatacac 226  Q
    ||||||| |||||| ||||||||||||| || | ||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||||||    
T  10658423 tttaaaaactcacaaaatcaatacaatctcatacagtcttttaaaatcttaaaagactttttta-ttaaaatagtcttttaaaatcctaatccaatacac 10658521  T
Q  227 cccc 230  Q
    ||||    
T  10658522 cccc 10658525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 2289261 - 2289371
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    |||||||||||||||||   || ||||||||||||| ||||||||||||||||||||| ||||          ||||| | ||||||||||||| |||||    
T  2289261 taaagtcttttaaaatccatcaaaatcaatacaatcacacaaagtcttttaaaatctttaagattcttttttctaaaacaatcttttaaaatcccaatcc 2289360  T
Q  220 aatacaccccc 230  Q
    |||||||||||    
T  2289361 aatacaccccc 2289371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 6288664 - 6288608
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt 177  Q
    ||||| |||||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  6288664 aaagttttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 6288608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 45497489 - 45497544
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatc 175  Q
    |||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||    
T  45497489 taaagtcttttaaaatctcaaaaaatcaatacaatcacacaaaatcttttaaaatc 45497544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 45505231 - 45505286
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatc 175  Q
    |||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||    
T  45505231 taaagtcttttaaaatctcaaaaaatcaatacaatcacacaaaatcttttaaaatc 45505286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 28739240 - 28739186
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatc 175  Q
    ||||||||||||||||||||||||||||||||||| || |  |||||||||||||    
T  28739240 aaagtcttttaaaatctcacagaatcaatacaatctcagacggtcttttaaaatc 28739186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 35906945 - 35907006
Alignment:
Q  122 aagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac 183  Q
    |||||||||||||||||| ||| |||||| |||||  ||||||| |||||||||||||||||    
T  35906945 aagtcttttaaaatctcatagagtcaatataatcctgcaaagtcatttaaaatcttaaagac 35907006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 214662 - 214622
Alignment:
Q  192 ttaaaaaagtcttttaaaatcctaatccaatacacccccct 232  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  214662 ttaaaatagtcttttaaaatcctaatccaatacacccccct 214622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 231
Target Start/End: Original strand, 379967 - 380006
Alignment:
Q  192 ttaaaaaagtcttttaaaatcctaatccaatacacccccc 231  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  379967 ttaaaatagtcttttaaaatcctaatccaatacacccccc 380006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 14919861 - 14919811
Alignment:
Q  124 gtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaat 174  Q
    |||||||||||| ||||| |||||||||||||| ||||| |||||||||||    
T  14919861 gtcttttaaaatttcacaaaatcaatacaatccaacaaaatcttttaaaat 14919811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 27979874 - 27979936
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||| || || | ||| ||||||||| ||||||||||||||||||||| ||||    
T  27979874 taaagtcttttaaattcccataaaattaatacaatcacacaaagtcttttaaaatctttaaga 27979936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 28066404 - 28066466
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||| || || | ||| ||||||||| ||||||||||||||||||||| ||||    
T  28066404 taaagtcttttaaattcccataaaattaatacaatcacacaaagtcttttaaaatctttaaga 28066466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 36597750 - 36597697
Alignment:
Q  124 gtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt 177  Q
    |||||||||||||||||| |||||||||||| |  |||| ||||||||||||||    
T  36597750 gtcttttaaaatctcacaaaatcaatacaattcatcaaaatcttttaaaatctt 36597697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 20156379 - 20156343
Alignment:
Q  194 aaaaaagtcttttaaaatcctaatccaatacaccccc 230  Q
    |||| ||||||||||||||||||||||||||||||||    
T  20156379 aaaatagtcttttaaaatcctaatccaatacaccccc 20156343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 35171493 - 35171428
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcc----cacaaagtcttttaaaatcttaaaga 182  Q
    ||||||||||||||||||||| ||||||||||||||     || ||||||||||||||||| ||||    
T  35171493 aaagtcttttaaaatctcacaaaatcaatacaatccaacgaacgaagtcttttaaaatcttcaaga 35171428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 38821359 - 38821303
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt 177  Q
    ||||||||||||||||  ||| |||||||| |||| |||||| ||||||||||||||    
T  38821359 aaagtcttttaaaatccaacaaaatcaatataatctcacaaaatcttttaaaatctt 38821303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 235
Target Start/End: Original strand, 20605573 - 20605604
Alignment:
Q  204 tttaaaatcctaatccaatacacccccctaag 235  Q
    ||||||||||||||||||||||||||||||||    
T  20605573 tttaaaatcctaatccaatacacccccctaag 20605604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 235
Target Start/End: Original strand, 35317760 - 35317791
Alignment:
Q  204 tttaaaatcctaatccaatacacccccctaag 235  Q
    ||||||||||||||||||||||||||||||||    
T  35317760 tttaaaatcctaatccaatacacccccctaag 35317791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 230
Target Start/End: Complemental strand, 30239198 - 30239160
Alignment:
Q  192 ttaaaaaagtcttttaaaatcctaatccaatacaccccc 230  Q
    |||||| |||||||||||||| |||||||||||||||||    
T  30239198 ttaaaatagtcttttaaaatcataatccaatacaccccc 30239160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 43023503 - 43023565
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||||   || ||||||||||||| || ||||| |||||||||||| ||||    
T  43023503 taaagtcttttaaaatccatcaaaatcaatacaatcacataaagttttttaaaatctttaaga 43023565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 230
Target Start/End: Complemental strand, 1188704 - 1188675
Alignment:
Q  201 tcttttaaaatcctaatccaatacaccccc 230  Q
    ||||||||||||||||||||||||||||||    
T  1188704 tcttttaaaatcctaatccaatacaccccc 1188675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 3576748 - 3576784
Alignment:
Q  124 gtcttttaaaatctcacagaatcaatacaatcccaca 160  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  3576748 gtcttttaaaatctcacagaattaatacaatctcaca 3576784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 20156689 - 20156633
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt 177  Q
    ||||||||||||||||  ||| | |||||| |||| |||||| ||||||||||||||    
T  20156689 aaagtcttttaaaatccaacaaagtcaatataatctcacaaaatcttttaaaatctt 20156633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 14781356 - 14781245
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        |||||| ||||||||||||||||||||||    
T  14781356 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 14781257  T
Q  221 atacacccccct 232  Q
    ||||||||||||    
T  14781256 atacacccccct 14781245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 18305185 - 18305074
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        ||||||  |||||||||||||||||||||    
T  18305185 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaattgtcttttaaaatcctaatcca 18305086  T
Q  221 atacacccccct 232  Q
    ||||||||||||    
T  18305085 atacacccccct 18305074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 121 - 228
Target Start/End: Complemental strand, 44725005 - 44724898
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        |||||| ||||||||||||||||||||||    
T  44725005 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 44724906  T
Q  221 atacaccc 228  Q
    ||||||||    
T  44724905 atacaccc 44724898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 121 - 230
Target Start/End: Original strand, 16365263 - 16365372
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||||  |||||||||||||||||| ||    
T  16365263 aaagtcttttaaaatctcacagaatcaatacaatcgcacaaagtcttttaaaatcttaaagactttttttattaaaattgtcttttaaaatcctaattca 16365362  T
Q  221 atacaccccc 230  Q
    ||||||||||    
T  16365363 atacaccccc 16365372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 125 - 230
Target Start/End: Complemental strand, 18957938 - 18957833
Alignment:
Q  125 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatccaatac 224  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        |||||| ||||||||||||||||||||||||||    
T  18957938 tcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatac 18957839  T
Q  225 accccc 230  Q
    ||||||    
T  18957838 accccc 18957833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 19717089 - 19716973
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac--nnnnnnngttaaaaaagtcttttaaaatcctaatc 218  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||          |||||| ||||||||||||||||||||    
T  19717089 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttttattaaaatagtcttttaaaatcctaatc 19716990  T
Q  219 caatacacccccctaag 235  Q
    ||||||| |||||||||    
T  19716989 caatacatccccctaag 19716973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 121 - 230
Target Start/End: Original strand, 32498877 - 32498986
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||  ||||||||||||||| |||| ||||||||||||||||||||||        |||||| ||||||||||||||||||||||    
T  32498877 aaagtcttttaaaatctcttagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 32498976  T
Q  221 atacaccccc 230  Q
    ||||||||||    
T  32498977 atacaccccc 32498986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 236
Target Start/End: Complemental strand, 42304852 - 42304734
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac--nnnnnnngttaaaaaagtcttttaaaatcctaat 217  Q
    |||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||          |||||| |||||||||||||||||||    
T  42304852 taaagtcttttaaaatctcacaaaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttttattaaaatagtcttttaaaatcctaat 42304753  T
Q  218 ccaatacacccccctaaga 236  Q
    |||||||| ||||||||||    
T  42304752 ccaatacatccccctaaga 42304734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 121 - 229
Target Start/End: Complemental strand, 4030552 - 4030443
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||         |||||| ||||||||||||||||||||     
T  4030552 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatct 4030453  T
Q  220 aatacacccc 229  Q
    ||||||||||    
T  4030452 aatacacccc 4030443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 229
Target Start/End: Complemental strand, 39466742 - 39466634
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||        |||||| | |||||||||||| |||||||    
T  39466742 aaagtcttttaaaatctcacagaatcaatacaatatcacagagtcttttaaaatcttaaagactttttttattaaaataatcttttaaaatcttaatcca 39466643  T
Q  221 atacacccc 229  Q
    |||||||||    
T  39466642 atacacccc 39466634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 222
Target Start/End: Complemental strand, 43307763 - 43307661
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    |||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||        |||||| |||||||||||||| ||||||    
T  43307763 taaagtcttttaaaatctcacagaatcaatccaatctcacacagtcttttaaaatcttaaagactctttttattaaaatagtcttttaaaatcttaatcc 43307664  T
Q  220 aat 222  Q
    |||    
T  43307663 aat 43307661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 125 - 230
Target Start/End: Complemental strand, 20831184 - 20831079
Alignment:
Q  125 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatccaatac 224  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||         | ||| ||||||||||||||||||| ||||||    
T  20831184 tcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaatagtcttttaaaatcctaattcaatac 20831085  T
Q  225 accccc 230  Q
    ||||||    
T  20831084 accccc 20831079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 31626286 - 31626392
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||| ||        |||||| ||| ||||||||||||||||||    
T  31626286 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaatactttttttattaaaatagtgttttaaaatcctaatcca 31626385  T
Q  221 atacacc 227  Q
    || ||||    
T  31626386 atgcacc 31626392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 9458485 - 9458598
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||         | |||| ||||||||||||||  ||||||    
T  9458485 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcca 9458584  T
Q  221 atacacccccctaa 234  Q
    ||||||||||||||    
T  9458585 atacacccccctaa 9458598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 40264383 - 40264270
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||         | |||| ||||||||||||||  ||||||    
T  40264383 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcca 40264284  T
Q  221 atacacccccctaa 234  Q
    ||||||||||||||    
T  40264283 atacacccccctaa 40264270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 7149012 - 7149123
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||         | |||| ||||||||||||||  ||||||    
T  7149012 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcca 7149111  T
Q  221 atacacccccct 232  Q
    ||||||||||||    
T  7149112 atacacccccct 7149123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 7467393 - 7467455
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac 183  Q
    ||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  7467393 aaagtcttttaaattctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagac 7467455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 37857864 - 37857971
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||||||||||||||||  | || |||||||||||||||||||| |         |||||| |||||||||||||||||||||    
T  37857864 aaagtcttttaaaatctcacagaatcaatacaat--ctcatagtcttttaaaatcttaaagtcttttttttattaaaatagtcttttaaaatcctaatcc 37857961  T
Q  220 aatacacccc 229  Q
    ||||||||||    
T  37857962 aatacacccc 37857971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 121 - 230
Target Start/End: Original strand, 4656054 - 4656163
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||         | |||| ||||||||||||||  ||||||    
T  4656054 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcca 4656153  T
Q  221 atacaccccc 230  Q
    ||||||||||    
T  4656154 atacaccccc 4656163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 10795483 - 10795422
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||    
T  10795483 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 10795422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 43489898 - 43489959
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||    
T  43489898 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 43489959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 10294616 - 10294564
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaa 172  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  10294616 taaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaa 10294564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 39371273 - 39371217
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt 177  Q
    |||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  39371273 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 39371217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 2113766 - 2113821
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatct 176  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||    
T  2113766 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatct 2113821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 38806028 - 38805970
Alignment:
Q  125 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac 183  Q
    ||||||||||||||| |||||||||||||||| | ||||||||||||||||| ||||||    
T  38806028 tcttttaaaatctcatagaatcaatacaatcctaaaaagtcttttaaaatctcaaagac 38805970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 35143064 - 35143125
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    ||||||||||||||||||||| |||||||||||||  ||| ||||||||||||||| |||||    
T  35143064 aaagtcttttaaaatctcacaaaatcaatacaatcttacagagtcttttaaaatctcaaaga 35143125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 42275922 - 42275983
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||  |||| |||||||||||||| |||||||||||||||||||| ||||    
T  42275922 aaagtcttttaaaattccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 42275983  T

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Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 43604483 - 43604422
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    ||||| |||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||    
T  43604483 aaagttttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 43604422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 41385978 - 41385922
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt 177  Q
    |||||||||||||||| |||| ||| |||||||||| ||||||||||||||||||||    
T  41385978 aaagtcttttaaaatcccacaaaattaatacaatccaacaaagtcttttaaaatctt 41385922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 5266845 - 5266790
Alignment:
Q  125 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaa 180  Q
    |||||||||||| |||| |||||||| |||| ||||||||||||||||||||||||    
T  5266845 tcttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatcttaaa 5266790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 1605905 - 1605847
Alignment:
Q  124 gtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    ||||||||||||| |||| ||||||||||||||  ||||||||||||||||||| ||||    
T  1605905 gtcttttaaaatcccacaaaatcaatacaatcctgcaaagtcttttaaaatcttcaaga 1605847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 28620661 - 28620723
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||||||| | ||||||||||||| |||||| | |||||||||||| ||||    
T  28620661 taaagtcttttaaaatctcaaaaaatcaatacaatcacacaaaattttttaaaatctttaaga 28620723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 40012399 - 40012341
Alignment:
Q  125 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac 183  Q
    ||||||||||||||||| |||| |||||||| |||||| ||||||||||||| ||||||    
T  40012399 tcttttaaaatctcacaaaatcgatacaatctcacaaactcttttaaaatctcaaagac 40012341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 14062471 - 14062525
Alignment:
Q  122 aagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatct 176  Q
    ||||||||||||||| || | |||||||| |||| ||||||||||||||||||||    
T  14062471 aagtcttttaaaatcccataaaatcaatagaatcacacaaagtcttttaaaatct 14062525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 230
Target Start/End: Original strand, 34893415 - 34893453
Alignment:
Q  192 ttaaaaaagtcttttaaaatcctaatccaatacaccccc 230  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  34893415 ttaaaatagtcttttaaaatcctaatccaatacaccccc 34893453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 9209888 - 9209944
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt 177  Q
    ||||||||||||||||  ||| |||||||| |||| |||||| ||||||||||||||    
T  9209888 aaagtcttttaaaatccaacaaaatcaatataatctcacaaaatcttttaaaatctt 9209944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 227
Target Start/End: Complemental strand, 9287707 - 9287608
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnng-ttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||||||||||||||   ||     ||||||||||||||||||||          |||||| |||||||||||||||||||||    
T  9287707 aaagtcttttaaaatctcacagaatcaataca---cc-----gtcttttaaaatcttaaagatttttttttattaaaatagtcttttaaaatcctaatcc 9287616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 42734840 - 42734808
Alignment:
Q  204 tttaaaatcctaatccaatacacccccctaaga 236  Q
    |||||||||||||||||||||||||||||||||    
T  42734840 tttaaaatcctaatccaatacacccccctaaga 42734808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 41964705 - 41964650
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatct 176  Q
    |||||||||||||||| |||| |||||||| ||| | ||||||| |||||||||||    
T  41964705 aaagtcttttaaaatcccacaaaatcaatataattcaacaaagttttttaaaatct 41964650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 10128241 - 10128303
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac 183  Q
    ||||||||||||||||||| ||| ||  |||||||| ||||| || ||||||||||| |||||    
T  10128241 aaagtcttttaaaatctcatagagtctttacaatcctacaaaatcatttaaaatcttgaagac 10128303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 37566586 - 37566515
Alignment:
Q  164 tcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatccaatacacccccctaag 235  Q
    |||||||||||||| |||||       || |||| ||||||||||||||  |||||||||||||||||||||    
T  37566586 tcttttaaaatcttcaagactttttttgtcaaaatagtcttttaaaatctcaatccaatacacccccctaag 37566515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 43165886 - 43165856
Alignment:
Q  125 tcttttaaaatctcacagaatcaatacaatc 155  Q
    |||||||||||||||||||||||||||||||    
T  43165886 tcttttaaaatctcacagaatcaatacaatc 43165856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 234
Target Start/End: Original strand, 42938068 - 42938097
Alignment:
Q  205 ttaaaatcctaatccaatacacccccctaa 234  Q
    ||||||||||||||||||||||||||||||    
T  42938068 ttaaaatcctaatccaatacacccccctaa 42938097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 4302219 - 4302163
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt 177  Q
    ||||||||||||||||  ||| | |||||| |||| |||||| ||||||||||||||    
T  4302219 aaagtcttttaaaatccaacaaagtcaatataatctcacaaaatcttttaaaatctt 4302163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 36673368 - 36673257
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        |||||| ||||||||||||||||||||||    
T  36673368 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 36673269  T
Q  221 atacacccccct 232  Q
    ||||||||||||    
T  36673268 atacacccccct 36673257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 52617195 - 52617084
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||||  |||||||||||||||||||||    
T  52617195 aaagtcttttaaaatctcacagaatcaatacaatctcacaaagtcttttaaaatcttaaagactttttttattaaaattgtcttttaaaatcctaatcca 52617096  T
Q  221 atacacccccct 232  Q
    ||||||||||||    
T  52617095 atacacccccct 52617084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 121 - 230
Target Start/End: Original strand, 11432533 - 11432642
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||        |||||| ||||||||||||||||||||||    
T  11432533 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaattttaaagactttttttattaaaatagtcttttaaaatcctaatcca 11432632  T
Q  221 atacaccccc 230  Q
    ||||||||||    
T  11432633 atacaccccc 11432642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 31645472 - 31645357
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        ||||||  ||||||||||||| |||||||    
T  31645472 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaattgtcttttaaaatcttaatcca 31645373  T
Q  221 atacacccccctaaga 236  Q
    |||||||||| |||||    
T  31645372 atacacccccttaaga 31645357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 45254663 - 45254554
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||         |||||| |||||||||||||||||||| |    
T  45254663 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagattttttttattaaaatagtcttttaaaatcctaatcta 45254564  T
Q  221 atacaccccc 230  Q
    ||||||||||    
T  45254563 atacaccccc 45254554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 44905065 - 44904961
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||        |||||| |||||||||||||| |||||||    
T  44905065 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagaccttttttattaaaatagtcttttaaaatcttaatcca 44904966  T
Q  221 ataca 225  Q
    |||||    
T  44904965 ataca 44904961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 10728235 - 10728119
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac--nnnnnnngttaaaaaagtcttttaaaatcctaatc 218  Q
    ||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||          |||||| ||||||||||||||||||||    
T  10728235 aaagtcttttaaaatctcacagaatcaatacaatctcacacattcttttaaaatcttaaagactttttttttattaaaatagtcttttaaaatcctaatc 10728136  T
Q  219 caatacacccccctaag 235  Q
    |||||||||||| ||||    
T  10728135 caatacacccccttaag 10728119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 123 - 241
Target Start/End: Complemental strand, 50902528 - 50902406
Alignment:
Q  123 agtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac----nnnnnnngttaaaaaagtcttttaaaatcctaatc 218  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||            |||||| |||||||||||||| |||||    
T  50902528 agtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttttttattaaaatagtcttttaaaatcttaatc 50902429  T
Q  219 caatacacccccctaagaataat 241  Q
    |||||||||||||||||| ||||    
T  50902428 caatacacccccctaagactaat 50902406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 18750619 - 18750732
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga--cnnnnnnngttaaaaaagtcttttaaaatcctaatc 218  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||           |||||| |||||||||||||||||||     
T  18750619 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagattttttttttattaaaatagtcttttaaaatcctaatt 18750718  T
Q  219 caatacacccccct 232  Q
    ||||||||||||||    
T  18750719 caatacacccccct 18750732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 10661173 - 10661285
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||| ||||||||||||||||||| |||| | ||||||||||||||||||||         |||||| |||||||||||||||||||||    
T  10661173 aaagtcttttaaaatatcacagaatcaatacaatctcacacaatcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatcc 10661272  T
Q  220 aatacacccccct 232  Q
    |||||| ||||||    
T  10661273 aatacatccccct 10661285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 228
Target Start/End: Complemental strand, 23752612 - 23752504
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||         |||||| |||||||||||||||||||      
T  23752612 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatta 23752513  T
Q  220 aatacaccc 228  Q
    |||||||||    
T  23752512 aatacaccc 23752504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 229
Target Start/End: Complemental strand, 50761332 - 50761222
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac--nnnnnnngttaaaaaagtcttttaaaatcctaatc 218  Q
    ||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||          |||||| |||||||||| |||||||||    
T  50761332 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaagactttttttttattaaaatagtcttttaatatcctaatc 50761233  T
Q  219 caatacacccc 229  Q
    |||||||||||    
T  50761232 caatacacccc 50761222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 125 - 227
Target Start/End: Original strand, 20833888 - 20833990
Alignment:
Q  125 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatccaatac 224  Q
    ||||||||||||| |||||||||||||||||  ||| | ||||||||||||||||||||        |||||| ||||||||||||||||||||||||||    
T  20833888 tcttttaaaatcttacagaatcaatacaatcttacacaatcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatac 20833987  T
Q  225 acc 227  Q
    |||    
T  20833988 acc 20833990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 34483313 - 34483252
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  34483313 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 34483252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 36054118 - 36054004
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||         | |||| ||||||||||||||  ||||||    
T  36054118 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaatagtcttttaaaatctcaatcca 36054019  T
Q  221 atacacccccctaag 235  Q
    |||||||||||||||    
T  36054018 atacacccccctaag 36054004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 51736976 - 51736870
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||         |||||| ||| |||||||||||||||||    
T  51736976 aaagtcttttaaaatctcacagaatcaatacaatctcgcatagtcttttaaaatcttaaagacttttttttattaaaatagtattttaaaatcctaatcc 51736877  T
Q  220 aatacac 226  Q
    |||||||    
T  51736876 aatacac 51736870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 54629836 - 54629947
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac---nnnnnnngttaaaaaagtcttttaaaatcctaat 217  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||           ||||||  ||||||||||||||||||    
T  54629836 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaacatcttaaagacttttttttttattaaaattgtcttttaaaatcctaat 54629935  T
Q  218 ccaatacacccc 229  Q
    ||||||||||||    
T  54629936 ccaatacacccc 54629947  T

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Target: chr3; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 39039062 - 39039121
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaa 180  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  39039062 aaagtcttttaaaatctcacagaatcaatacaatctcacaaagtcatttaaaatcttaaa 39039121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 44707921 - 44707984
Alignment:
Q  119 ttaaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  44707921 ttaaagtcttttaaaatctcacagaatcggtacaatctcacaaagtcttttaaaatcttaaaga 44707984  T

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Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 230
Target Start/End: Original strand, 17947204 - 17947315
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt-aaaga-cnnnnnnngttaaaaaagtcttttaaaatcctaatc 218  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || |||||          |||||| ||||||||||||||||||||    
T  17947204 aaagtcttttaaaatctcacagaatcaatacaatctcacatagtcttttaaaattttaaaagatttttttttattaaaatagtcttttaaaatcctaatc 17947303  T
Q  219 caatacaccccc 230  Q
    ||||||||||||    
T  17947304 caatacaccccc 17947315  T

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Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 45214193 - 45214131
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  45214193 taaagtcttttaaaatctcacaaaatcaatacaatcacacaaagtcttttaaaatctttaaga 45214131  T

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Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 2124813 - 2124699
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||| |||| |||||||||||||| ||||||||||||||||| || ||||         | |||| ||||||||||||||  ||||||    
T  2124813 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaattttcaagattttttttatcaaaacagtcttttaaaatctcaatcca 2124714  T
Q  221 atacacccccctaag 235  Q
    |||||||||||||||    
T  2124713 atacacccccctaag 2124699  T

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Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 26556845 - 26556959
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||| |||| |||||||||||||  |||||||||||||||||||| ||||         | |||| ||||||||||||||  ||||||    
T  26556845 aaagtcttttaaaatcccacaaaatcaatacaatcgaacaaagtcttttaaaatctttaagattttttctatcaaaacagtcttttaaaatctcaatcca 26556944  T
Q  221 atacacccccctaag 235  Q
    |||||||||||||||    
T  26556945 atacacccccctaag 26556959  T

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Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 231
Target Start/End: Original strand, 30589823 - 30589933
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||         | |||| ||||||||||||||  ||||||    
T  30589823 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcca 30589922  T
Q  221 atacacccccc 231  Q
    |||||||||||    
T  30589923 atacacccccc 30589933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 39841664 - 39841554
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||| ||||||||||||| | || ||||||||||||||||||||||         |||||| |||||||||||||| |||| |    
T  39841664 aaagtcttttaaaatctcacataatcaatacaatctcgcacagtcttttaaaatcttaaagactttcttttattaaaatagtcttttaaaatcataattc 39841565  T
Q  220 aatacaccccc 230  Q
    |||||||||||    
T  39841564 aatacaccccc 39841554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 50902569 - 50902514
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatct 176  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  50902569 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatct 50902514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 52811371 - 52811425
Alignment:
Q  125 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaa 179  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  52811371 tcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaa 52811425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 23360555 - 23360616
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||    
T  23360555 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 23360616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 23367395 - 23367456
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||    
T  23367395 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 23367456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 27239439 - 27239326
Alignment:
Q  121 aaagtcttttaaaatctcacagaa-----tcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatccta 215  Q
    ||||||||||||||||||||||||     |||||||||||  ||| ||||||||||||||||||| ||        |||||| |||||||||||||||||    
T  27239439 aaagtcttttaaaatctcacagaagacaatcaatacaatcttacacagtcttttaaaatcttaaa-actttttttattaaaatagtcttttaaaatccta 27239341  T
Q  216 atccaatacaccccc 230  Q
    |||||||||||||||    
T  27239340 atccaatacaccccc 27239326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 40898062 - 40898163
Alignment:
Q  128 tttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatccaatacacc 227  Q
    |||||||||||||||||||||  ||||| |||| ||||||||||||||||||||||        |||||| ||||||||||||| |||||| ||||||||    
T  40898062 tttaaaatctcacagaatcaag-caatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaattctaatcgaatacacc 40898160  T
Q  228 ccc 230  Q
    |||    
T  40898161 ccc 40898163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 46223414 - 46223353
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||    
T  46223414 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 46223353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 24149945 - 24149836
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||| |||| |||||||| ||||| |||||||| ||||||||||| ||||         | |||| |||||||||||||| |||||||    
T  24149945 aaagtcttttaaaatcccacaaaatcaatataatccaacaaagtcatttaaaatcttcaagattttttctatcaaaatagtcttttaaaatcttaatcca 24149846  T
Q  221 atacaccccc 230  Q
    ||||||||||    
T  24149845 atacaccccc 24149836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 48380126 - 48380185
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaa 180  Q
    ||||| ||||||||||||||||||||||||||||| |||| | |||||||||||||||||    
T  48380126 aaagttttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaa 48380185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 50899554 - 50899493
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    ||||||||||||||||  ||| |||||||||||||| |||||||||||||||||||| ||||    
T  50899554 aaagtcttttaaaatccgacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 50899493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 23697949 - 23698005
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt 177  Q
    |||||||||| ||||| |||| |||||||||||||| ||||||||||||||||||||    
T  23697949 aaagtcttttgaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 23698005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 23716404 - 23716460
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt 177  Q
    |||||||||| ||||| |||| |||||||||||||| ||||||||||||||||||||    
T  23716404 aaagtcttttgaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 23716460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 23734860 - 23734916
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt 177  Q
    |||||||||| ||||| |||| |||||||||||||| ||||||||||||||||||||    
T  23734860 aaagtcttttgaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 23734916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 34290275 - 34290220
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatct 176  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||||||||||||    
T  34290275 aaagtcttttaaaatcccataaaatcaatacaatcacacaaagtcttttaaaatct 34290220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 229
Target Start/End: Complemental strand, 38628928 - 38628820
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||| |||| |||||||||||| | ||||||||||||||||| || ||||         | |||| ||||||||||||||  ||||||    
T  38628928 aaagtcttttaaaatcccacaaaatcaatacaattcaacaaagtcttttaaaattttcaagattttttctatcaaaagagtcttttaaaatctcaatcca 38628829  T
Q  221 atacacccc 229  Q
    |||||||||    
T  38628828 atacacccc 38628820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 46251308 - 46251246
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||||||| | |  |||||||||| ||||||||||||||||||||| ||||    
T  46251308 taaagtcttttaaaatctcaaaaagccaatacaatcacacaaagtcttttaaaatctttaaga 46251246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 19551257 - 19551205
Alignment:
Q  125 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt 177  Q
    |||||||||||| |||| |||||||||||||| | ||||||||||||||||||    
T  19551257 tcttttaaaatcccacaaaatcaatacaatccaataaagtcttttaaaatctt 19551205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 23754523 - 23754579
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt 177  Q
    ||||| |||| ||||| |||| |||||||||||||| ||||||||||||||||||||    
T  23754523 aaagtattttgaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctt 23754579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 26292671 - 26292563
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||  |||| ||| |||||||||| |||||||||||||||||||| ||||         | |||| ||||||||||||||  ||||||    
T  26292671 aaagtcttttaaaattccacaaaat-aatacaatccaacaaagtcttttaaaatcttcaagatattttctatcaaaacagtcttttaaaatctcaatcca 26292573  T
Q  221 atacaccccc 230  Q
    ||||||||||    
T  26292572 atacaccccc 26292563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 5493033 - 5493092
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaa 180  Q
    ||||| |||||||||||||| |||||||||||||  |||||| ||||||||||| |||||    
T  5493033 aaagtattttaaaatctcactgaatcaatacaatttcacaaaatcttttaaaattttaaa 5493092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 7319145 - 7319179
Alignment:
Q  200 gtcttttaaaatcctaatccaatacacccccctaa 234  Q
    |||||||||||||||||||||||||||||||||||    
T  7319145 gtcttttaaaatcctaatccaatacacccccctaa 7319179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 53183187 - 53183125
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac 183  Q
    ||||||||||||||||| | ||||||||||||||   ||||| ||||||||||||| ||||||    
T  53183187 aaagtcttttaaaatcttaaagaatcaatacaatattacaaaatcttttaaaatctcaaagac 53183125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 230
Target Start/End: Original strand, 26108489 - 26108525
Alignment:
Q  194 aaaaaagtcttttaaaatcctaatccaatacaccccc 230  Q
    |||||| ||||||||||||||||||||||||||||||    
T  26108489 aaaaaaatcttttaaaatcctaatccaatacaccccc 26108525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 37455893 - 37455928
Alignment:
Q  192 ttaaaaaagtcttttaaaatcctaatccaatacacc 227  Q
    |||||| |||||||||||||||||||||||||||||    
T  37455893 ttaaaatagtcttttaaaatcctaatccaatacacc 37455928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 44040936 - 44040889
Alignment:
Q  194 aaaaaagtcttttaaaatcctaatccaatacacccccctaagaataat 241  Q
    |||| ||||| |||||||| ||||||||||||||||||| ||||||||    
T  44040936 aaaatagtctcttaaaatcttaatccaatacaccccccttagaataat 44040889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 234
Target Start/End: Complemental strand, 995508 - 995478
Alignment:
Q  204 tttaaaatcctaatccaatacacccccctaa 234  Q
    |||||||||||||||||||||||||||||||    
T  995508 tttaaaatcctaatccaatacacccccctaa 995478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 26004957 - 26004904
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaat 174  Q
    |||||||||||||||| |||| |||||||||||| | ||||| ||| |||||||    
T  26004957 aaagtcttttaaaatcccacaaaatcaatacaattcaacaaactctcttaaaat 26004904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 150
Target Start/End: Original strand, 37455824 - 37455853
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaata 150  Q
    ||||||||||||||||||||||||||||||    
T  37455824 aaagtcttttaaaatctcacagaatcaata 37455853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 232
Target Start/End: Complemental strand, 3999173 - 3999145
Alignment:
Q  204 tttaaaatcctaatccaatacacccccct 232  Q
    |||||||||||||||||||||||||||||    
T  3999173 tttaaaatcctaatccaatacacccccct 3999145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 44761643 - 44761604
Alignment:
Q  204 tttaaaatcctaatccaatacacccccctaagaataatcta 244  Q
    ||||||||||||||||||||||| |||||||| ||||||||    
T  44761643 tttaaaatcctaatccaatacac-cccctaagtataatcta 44761604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 48380207 - 48380243
Alignment:
Q  192 ttaaaaaagtcttttaaaatcctaatccaatacaccc 228  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  48380207 ttaaaatagtcttttaaaattctaatccaatacaccc 48380243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 233
Target Start/End: Complemental strand, 57278 - 57166
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||        |||||| ||||||||||||| ||||||||    
T  57278 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaggactttttttattaaaatagtcttttaaaattctaatcca 57179  T
Q  221 atacaccccccta 233  Q
    |||||||||||||    
T  57178 atacaccccccta 57166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 13999323 - 13999211
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||         |||||| |||||||||||||||||||||    
T  13999323 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatcc 13999224  T
Q  220 aatacacccccct 232  Q
    |||||||||||||    
T  13999223 aatacacccccct 13999211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 39853338 - 39853449
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||        |||||| ||||||||||||| ||||||||    
T  39853338 aaagtcttttaaaatctcacagaatcaatacaatctcacagagtcttttaaaatctaaaagactttttatattaaaatagtcttttaaaattctaatcca 39853437  T
Q  221 atacacccccct 232  Q
    ||||||||||||    
T  39853438 atacacccccct 39853449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 13717081 - 13717189
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||| ||||||||||||| |||| | ||||||||||||||||||||        |||||| ||||||||||||||||||||||    
T  13717081 aaagtcttttaaaatctcacaaaatcaatacaatctcacacaatcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 13717180  T
Q  221 atacacccc 229  Q
    |||||||||    
T  13717181 atacacccc 13717189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 13926918 - 13927027
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||         |||||| |||||||||||||||||||||    
T  13926918 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtctttttaaatcttaaagacttttatttattaaaatagtcttttaaaatcctaatcc 13927017  T
Q  220 aatacacccc 229  Q
    ||||||||||    
T  13927018 aatacacccc 13927027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 40012926 - 40012814
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||| ||||||||||||| ||||  |||||||||||||||||||||         |||||| |||||||||||||||||||||    
T  40012926 aaagtcttttaaaatctcacaaaatcaatacaatctcacactgtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatcc 40012827  T
Q  220 aatacacccccct 232  Q
    |||||||||||||    
T  40012826 aatacacccccct 40012814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 4239689 - 4239574
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||||||| |||| |||| |||| ||||||||||||||||||||||         |||||| |||||||||||||||||||||    
T  4239689 aaagtcttttaaaatctcacagaattaataaaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatcc 4239590  T
Q  220 aatacacccccctaag 235  Q
    ||||||||||| ||||    
T  4239589 aatacacccccttaag 4239574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 121 - 229
Target Start/End: Complemental strand, 1151508 - 1151400
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||        |||||| ||| ||||||||| ||||||||    
T  1151508 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaagacttattttattaaaatagttttttaaaattctaatcca 1151409  T
Q  221 atacacccc 229  Q
     ||||||||    
T  1151408 ttacacccc 1151400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 229
Target Start/End: Complemental strand, 7947238 - 7947134
Alignment:
Q  125 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatccaatac 224  Q
    ||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||         ||||| ||||||||||||||||||| ||||||    
T  7947238 tcttttaaaatctcacagaatcaatacaatctcacacggtcttttaaaatcttaaagactttttttaataaaatagtcttttaaaatcctaattcaatac 7947139  T
Q  225 acccc 229  Q
    |||||    
T  7947138 acccc 7947134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 121 - 224
Target Start/End: Complemental strand, 1459404 - 1459300
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||         |||||| ||||||||||||||||||| |    
T  1459404 aaagtcttttaaaatctcacataatcaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaattc 1459305  T
Q  220 aatac 224  Q
    |||||    
T  1459304 aatac 1459300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 4549474 - 4549363
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga--cnnnnnnngttaaaaaagtcttttaaaatcctaatc 218  Q
    ||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||           |||||| ||||||||||||||||||||    
T  4549474 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaagattttttttttattaaaatagtcttttaaaatcctaatc 4549375  T
Q  219 caatacaccccc 230  Q
     |||||||||||    
T  4549374 gaatacaccccc 4549363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 11632794 - 11632681
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||| |||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||         | |||| ||||||||||||||  ||||||    
T  11632794 aaagtattttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcca 11632695  T
Q  221 atacacccccctaa 234  Q
    ||||||||||||||    
T  11632694 atacacccccctaa 11632681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 10553714 - 10553775
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||    
T  10553714 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 10553775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 40411395 - 40411456
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||    
T  40411395 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 40411456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 13949909 - 13949848
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    ||||||||||| |||| |||| |||||||||||||| |||||||||||||||||||| ||||    
T  13949909 aaagtcttttataatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 13949848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 5950104 - 5950163
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaa 180  Q
    |||||| |||||||||||||||||||||||||||| |||| | | |||||||||||||||    
T  5950104 aaagtcatttaaaatctcacagaatcaatacaatctcacataatattttaaaatcttaaa 5950163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 10553541 - 10553486
Alignment:
Q  127 ttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||    
T  10553541 ttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 10553486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 37014846 - 37014953
Alignment:
Q  125 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatccaata 223  Q
    |||||||||||||| ||||||| |||||||| | || ||| ||||||||||||||||||         |||||| | ||||||||||| |||||||||||    
T  37014846 tcttttaaaatctcccagaatcgatacaatctcccacagtattttaaaatcttaaagacttttttttattaaaataatcttttaaaattctaatccaata 37014945  T
Q  224 cacccccc 231  Q
    ||||||||    
T  37014946 cacccccc 37014953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 17519499 - 17519548
Alignment:
Q  125 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaat 174  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||||||    
T  17519499 tcttttaaaatctcacagaatcaataaaatcttacaaagtcttttaaaat 17519548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 3603564 - 3603512
Alignment:
Q  125 tcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctt 177  Q
    |||||||||||  |||| |||||||||||||| ||||||||||||||||||||    
T  3603564 tcttttaaaattccacaaaatcaatacaatccaacaaagtcttttaaaatctt 3603512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 28593029 - 28592993
Alignment:
Q  200 gtcttttaaaatcctaatccaatacacccccctaaga 236  Q
    |||||||||||||||||||||||||||||||||||||    
T  28593029 gtcttttaaaatcctaatccaatacacccccctaaga 28592993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 2275378 - 2275316
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||| ||||   || ||||||||||||| ||||||||||||||||||||| ||||    
T  2275378 taaagtcttttagaatccatcaaaatcaatacaatcacacaaagtcttttaaaatctttaaga 2275316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 26629619 - 26629511
Alignment:
Q  122 aagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatccaa 221  Q
    |||||||||||||||||| ||| ||  |||||||| ||||| ||||||||||| || |||||        | |||| ||||||||||||||  |||||||    
T  26629619 aagtcttttaaaatctcatagagtctttacaatcctacaaaatcttttaaaattttcaagactttttcaatcaaaatagtcttttaaaatctcaatccaa 26629520  T
Q  222 tacaccccc 230  Q
    |||| ||||    
T  26629519 tacagcccc 26629511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 10572271 - 10572316
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtct 166  Q
    |||||||||||| ||||||||||||||||| ||||  |||||||||    
T  10572271 aaagtcttttaatatctcacagaatcaatagaatcttacaaagtct 10572316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 5272463 - 5272431
Alignment:
Q  204 tttaaaatcctaatccaatacacccccctaaga 236  Q
    ||||||||||||||||||||||||||| |||||    
T  5272463 tttaaaatcctaatccaatacacccccataaga 5272431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 232
Target Start/End: Original strand, 21147801 - 21147829
Alignment:
Q  204 tttaaaatcctaatccaatacacccccct 232  Q
    |||||||||||||||||||||||||||||    
T  21147801 tttaaaatcctaatccaatacacccccct 21147829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 32827949 - 32827897
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaa 173  Q
    ||||||||| |||||| ||   |||||||||||||| ||||||||||||||||    
T  32827949 aaagtctttcaaaatcccattaaatcaatacaatccaacaaagtcttttaaaa 32827897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0940 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 3682 - 3573
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    ||||| ||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||        |||||| ||||||||||||||||||||||    
T  3682 aaagttttttaaaatctcacagaatcaatacaatctcacacagtctcttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 3583  T
Q  221 atacaccccc 230  Q
    ||||||||||    
T  3582 atacaccccc 3573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 228
Target Start/End: Complemental strand, 36509 - 36401
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    |||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||         |||||| |||||||||||||||||||||    
T  36509 aaagtcttttaaaatctcacagaatcaatataatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcctaatcc 36410  T
Q  220 aatacaccc 228  Q
    |||||||||    
T  36409 aatacaccc 36401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 80901 - 80787
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||         | |||||||||||||||||||  ||||||    
T  80901 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaaaagtcttttaaaatctcaatcca 80802  T
Q  221 atacacccccctaag 235  Q
    |||||||||||||||    
T  80801 atacacccccctaag 80787  T

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Target: scaffold0153 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 33933 - 33824
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||         | |||||||||||||||||||  ||||||    
T  33933 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaaaagtcttttaaaatctcaatcca 33834  T
Q  221 atacaccccc 230  Q
    ||||||||||    
T  33833 atacaccccc 33824  T

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Target: scaffold0237 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 121 - 233
Target Start/End: Complemental strand, 20555 - 20443
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||||         | |||| ||||||||||||||  ||||||    
T  20555 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcca 20456  T
Q  221 atacaccccccta 233  Q
    |||||||||||||    
T  20455 atacaccccccta 20443  T

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Target: scaffold1521 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1521
Description:

Target: scaffold1521; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 1401 - 1291
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctta-aagacnnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||||| ||||||||| |||||        |||||| ||||||||||||||||||| |    
T  1401 aaagtcttttaaaatctcacagaatcaatacaatctcacacggtctttaaaaatcttataagactttttttattaaaatagtcttttaaaatcctaattc 1302  T
Q  220 aatacaccccc 230  Q
    ||||| |||||    
T  1301 aatactccccc 1291  T

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Target: scaffold0383 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 16256 - 16146
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctta-aagacnnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||||| ||||||||| |||||        |||||| ||||||||||||||||||| |    
T  16256 aaagtcttttaaaatctcacagaatcaatacaatctcacacggtctttaaaaatcttataagactttttttattaaaatagtcttttaaaatcctaattc 16157  T
Q  220 aatacaccccc 230  Q
    ||||| |||||    
T  16156 aatactccccc 16146  T

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Target: scaffold0152 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 230
Target Start/End: Original strand, 29318 - 29428
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctta-aagacnnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||||| ||||||||| |||||        |||||| ||||||||||||||||||| |    
T  29318 aaagtcttttaaaatctcacagaatcaatacaatctcacacggtctttaaaaatcttataagactttttttattaaaatagtcttttaaaatcctaattc 29417  T
Q  220 aatacaccccc 230  Q
    ||||| |||||    
T  29418 aatactccccc 29428  T

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Target: scaffold0152; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 20483 - 20426
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatctta 178  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||||| |||||||||    
T  20483 aaagtcttttaaaatctcacagaatcaatacaatctcacacggtctttaaaaatctta 20426  T

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Target: scaffold0095 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 21759 - 21865
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcca 220  Q
    |||||||||||||||||||||| |||||||||||  | || ||||||||||||| ||||||||        |||||| | |||||||||||| |||||||    
T  21759 aaagtcttttaaaatctcacaggatcaatacaatatcccagagtcttttaaaatgttaaagactttttgtattaaaataatcttttaaaatcttaatcca 21858  T
Q  221 atacacc 227  Q
    |||||||    
T  21859 atacacc 21865  T

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Target: scaffold0839 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 121 - 228
Target Start/End: Complemental strand, 3222 - 3114
Alignment:
Q  121 aaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaagac-nnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||| ||||||||||||| ||| ||||||||| |||| ||||||||||||||||||||||         |||||| |||||||||||||| |||||     
T  3222 aaagtctcttaaaatctcacataattaatacaatctcacacagtcttttaaaatcttaaagacttttttttattaaaatagtcttttaaaatcttaatct 3123  T
Q  220 aatacaccc 228  Q
    |||||||||    
T  3122 aatacaccc 3114  T

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Target: scaffold0472 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 1047 - 985
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    ||||||||||||||||| |||| ||||||||||||| |||||| |||||||||||||| ||||    
T  1047 taaagtcttttaaaatcccacaaaatcaatacaatcacacaaaatcttttaaaatctttaaga 985  T

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Target: scaffold0110 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 125 - 230
Target Start/End: Complemental strand, 38857 - 38749
Alignment:
Q  125 tcttttaaaatctcacagaatcaatacaatcccacaa-----agtcttttaaaatcttaaagacnnnnnnngttaaaaaagtcttttaaaatcctaatcc 219  Q
    ||||||||||||||||||||||||||||||| ||||      ||||||||||||||||||| ||        |||| |  ||||||||||||||||||||    
T  38857 tcttttaaaatctcacagaatcaatacaatctcacatcacacagtcttttaaaatcttaaaaactttttttattaata--gtcttttaaaatcctaatcc 38760  T
Q  220 aatacaccccc 230  Q
    |||||||||||    
T  38759 aatacaccccc 38749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 15734 - 15672
Alignment:
Q  120 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 182  Q
    |||||||||||||||||||| | ||||||||||||| ||  | ||||||||||||||| ||||    
T  15734 taaagtcttttaaaatctcaaaaaatcaatacaatcacatgaggtcttttaaaatctttaaga 15672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 12094 - 12131
Alignment:
Q  193 taaaaaagtcttttaaaatcctaatccaatacaccccc 230  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  12094 taaaatagtcttttaaaatcctaatccaatacaccccc 12131  T

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Target: scaffold0287 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 229
Target Start/End: Complemental strand, 10892 - 10863
Alignment:
Q  200 gtcttttaaaatcctaatccaatacacccc 229  Q
    ||||||||||||||||||||||||||||||    
T  10892 gtcttttaaaatcctaatccaatacacccc 10863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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