View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0912_low_30 (Length: 315)

Name: NF0912_low_30
Description: NF0912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0912_low_30
NF0912_low_30
[»] scaffold0553 (1 HSPs)
scaffold0553 (1-236)||(10145-10381)
[»] scaffold0544 (1 HSPs)
scaffold0544 (1-236)||(1475-1711)
[»] chr3 (27 HSPs)
chr3 (1-236)||(23370455-23370691)
chr3 (1-185)||(9534198-9534382)
chr3 (8-185)||(14762758-14762936)
chr3 (8-183)||(20247791-20247967)
chr3 (1-183)||(24192825-24193009)
chr3 (8-183)||(38310802-38310978)
chr3 (76-194)||(24933820-24933937)
chr3 (131-236)||(17131732-17131837)
chr3 (4-183)||(55499104-55499285)
chr3 (5-186)||(16801467-16801648)
chr3 (104-186)||(41455097-41455178)
chr3 (131-236)||(14865846-14865951)
chr3 (131-236)||(12033395-12033499)
chr3 (131-233)||(13302195-13302295)
chr3 (131-233)||(13323742-13323842)
chr3 (131-233)||(13312851-13312951)
chr3 (124-185)||(18929239-18929300)
chr3 (121-185)||(17240513-17240577)
chr3 (76-201)||(10389428-10389553)
chr3 (76-201)||(10414517-10414642)
chr3 (76-201)||(10421187-10421312)
chr3 (131-191)||(51301589-51301649)
chr3 (133-236)||(19235020-19235121)
chr3 (151-187)||(23392818-23392854)
chr3 (129-183)||(16801027-16801081)
chr3 (150-187)||(2247648-2247685)
chr3 (151-187)||(52212430-52212466)
[»] chr5 (21 HSPs)
chr5 (1-186)||(38144536-38144721)
chr5 (1-185)||(28370055-28370239)
chr5 (1-185)||(19512256-19512441)
chr5 (8-186)||(22751018-22751197)
chr5 (76-186)||(23528577-23528686)
chr5 (131-236)||(19236900-19237005)
chr5 (133-236)||(22461158-22461261)
chr5 (133-236)||(22467782-22467885)
chr5 (121-185)||(18407944-18408008)
chr5 (130-187)||(22438746-22438803)
chr5 (121-185)||(23111200-23111264)
chr5 (131-236)||(20781744-20781847)
chr5 (131-236)||(20772969-20773072)
chr5 (131-236)||(28909240-28909344)
chr5 (131-236)||(28945635-28945739)
chr5 (131-236)||(28895992-28896096)
chr5 (131-236)||(28924818-28924922)
chr5 (132-191)||(34830086-34830144)
chr5 (157-187)||(17021912-17021942)
chr5 (151-187)||(21663141-21663177)
chr5 (151-187)||(22356902-22356938)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-191)||(111556-111746)
scaffold0026 (8-186)||(11850-12029)
[»] chr8 (14 HSPs)
chr8 (1-201)||(44477493-44477693)
chr8 (1-201)||(44492651-44492851)
chr8 (1-183)||(8727735-8727918)
chr8 (8-186)||(23866491-23866670)
chr8 (131-236)||(24320620-24320725)
chr8 (1-94)||(27940946-27941039)
chr8 (76-184)||(17054537-17054644)
chr8 (121-185)||(23482053-23482117)
chr8 (129-185)||(18614271-18614327)
chr8 (130-195)||(25111976-25112041)
chr8 (129-185)||(39364919-39364975)
chr8 (131-185)||(29643386-29643440)
chr8 (130-187)||(14056562-14056619)
chr8 (129-185)||(21931696-21931752)
[»] chr2 (18 HSPs)
chr2 (1-185)||(6483588-6483772)
chr2 (1-185)||(6487055-6487239)
chr2 (5-185)||(19661454-19661634)
chr2 (5-186)||(26583702-26583882)
chr2 (1-185)||(23101463-23101648)
chr2 (1-183)||(23089057-23089240)
chr2 (1-183)||(23878878-23879060)
chr2 (131-236)||(26885183-26885287)
chr2 (131-235)||(25180880-25180984)
chr2 (131-236)||(27207669-27207774)
chr2 (131-233)||(10577-10679)
chr2 (76-191)||(5706018-5706133)
chr2 (133-236)||(23168249-23168351)
chr2 (133-236)||(23579506-23579608)
chr2 (121-185)||(23265133-23265197)
chr2 (121-185)||(23280201-23280265)
chr2 (124-185)||(21908353-21908414)
chr2 (129-185)||(24661576-24661632)
[»] chr7 (32 HSPs)
chr7 (5-186)||(14422858-14423040)
chr7 (1-185)||(16009447-16009631)
chr7 (8-181)||(10895795-10895969)
chr7 (8-185)||(15168052-15168230)
chr7 (8-186)||(18873237-18873416)
chr7 (8-186)||(12709843-12710022)
chr7 (8-186)||(13122914-13123093)
chr7 (6-186)||(13743584-13743764)
chr7 (5-183)||(16677167-16677348)
chr7 (5-183)||(17651403-17651584)
chr7 (9-186)||(12590643-12590818)
chr7 (76-186)||(13007378-13007487)
chr7 (131-236)||(2971254-2971359)
chr7 (130-236)||(14567203-14567309)
chr7 (131-236)||(14319579-14319684)
chr7 (131-236)||(20906411-20906516)
chr7 (131-236)||(29181058-29181164)
chr7 (134-236)||(16091078-16091181)
chr7 (131-236)||(14230781-14230886)
chr7 (130-185)||(11382871-11382926)
chr7 (130-185)||(11389348-11389403)
chr7 (130-187)||(20311050-20311107)
chr7 (130-187)||(21230958-21231015)
chr7 (122-185)||(13679485-13679548)
chr7 (133-201)||(31155396-31155464)
chr7 (131-185)||(11311059-11311113)
chr7 (129-185)||(46625961-46626017)
chr7 (150-186)||(831633-831669)
chr7 (150-186)||(1196813-1196849)
chr7 (131-191)||(2465361-2465421)
chr7 (131-191)||(3857360-3857419)
chr7 (150-186)||(34958578-34958614)
[»] chr6 (35 HSPs)
chr6 (1-191)||(10986175-10986366)
chr6 (1-185)||(23839068-23839253)
chr6 (5-185)||(4477731-4477912)
chr6 (8-186)||(29614146-29614325)
chr6 (8-185)||(23057815-23057993)
chr6 (5-186)||(18800311-18800493)
chr6 (52-186)||(930095-930229)
chr6 (103-191)||(34646655-34646743)
chr6 (1-183)||(21565214-21565397)
chr6 (76-186)||(12168309-12168418)
chr6 (76-186)||(19287218-19287327)
chr6 (76-186)||(19785869-19785978)
chr6 (76-186)||(19878402-19878511)
chr6 (103-191)||(34639981-34640069)
chr6 (76-186)||(19884178-19884287)
chr6 (80-187)||(25469703-25469808)
chr6 (133-236)||(20007897-20007999)
chr6 (121-236)||(31252413-31252529)
chr6 (130-187)||(24512842-24512899)
chr6 (97-236)||(11288620-11288758)
chr6 (158-236)||(28288461-28288537)
chr6 (133-185)||(9187498-9187550)
chr6 (129-185)||(25348486-25348542)
chr6 (129-183)||(25598643-25598697)
chr6 (131-236)||(21364433-21364537)
chr6 (131-236)||(23968415-23968519)
chr6 (133-201)||(15458492-15458560)
chr6 (133-201)||(15465087-15465155)
chr6 (129-185)||(25397172-25397228)
chr6 (133-236)||(9099023-9099124)
chr6 (129-185)||(19471335-19471391)
chr6 (129-183)||(2286769-2286823)
chr6 (151-185)||(18659450-18659484)
chr6 (151-185)||(24441673-24441707)
chr6 (151-187)||(29847278-29847314)
[»] chr1 (17 HSPs)
chr1 (1-185)||(20437024-20437209)
chr1 (76-186)||(41111981-41112090)
chr1 (131-236)||(20851082-20851187)
chr1 (131-236)||(20857709-20857814)
chr1 (131-236)||(21706276-21706381)
chr1 (131-236)||(21710818-21710923)
chr1 (121-185)||(32651563-32651627)
chr1 (121-185)||(18712790-18712854)
chr1 (130-185)||(19663517-19663572)
chr1 (129-185)||(20805320-20805376)
chr1 (130-185)||(11158093-11158148)
chr1 (129-183)||(10811785-10811839)
chr1 (133-227)||(20044910-20045004)
chr1 (155-185)||(24476350-24476380)
chr1 (155-185)||(25091418-25091448)
chr1 (151-184)||(18271338-18271371)
chr1 (151-184)||(18275992-18276025)
[»] scaffold0029 (3 HSPs)
scaffold0029 (8-186)||(111758-111938)
scaffold0029 (131-191)||(91197-91257)
scaffold0029 (131-191)||(96923-96983)
[»] scaffold1773 (1 HSPs)
scaffold1773 (8-186)||(1055-1233)
[»] scaffold0006 (1 HSPs)
scaffold0006 (8-186)||(50056-50234)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-183)||(14398-14582)
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-186)||(11211-11397)
[»] scaffold0924 (1 HSPs)
scaffold0924 (8-186)||(750-930)
[»] scaffold0058 (1 HSPs)
scaffold0058 (6-186)||(167-346)
[»] scaffold0117 (2 HSPs)
scaffold0117 (9-186)||(8574-8751)
scaffold0117 (9-186)||(1897-2074)
[»] chr4 (16 HSPs)
chr4 (9-186)||(8045832-8046009)
chr4 (8-186)||(11847984-11848169)
chr4 (76-191)||(53483650-53483765)
chr4 (130-187)||(15408139-15408196)
chr4 (131-213)||(16146803-16146885)
chr4 (129-185)||(8834895-8834951)
chr4 (129-185)||(13888641-13888697)
chr4 (131-183)||(14486661-14486713)
chr4 (129-185)||(15245215-15245271)
chr4 (131-191)||(27906266-27906326)
chr4 (129-180)||(22724691-22724742)
chr4 (129-185)||(15308120-15308176)
chr4 (129-187)||(14912081-14912139)
chr4 (155-185)||(15069781-15069811)
chr4 (155-185)||(15076381-15076411)
chr4 (150-186)||(15747556-15747592)
[»] scaffold0154 (1 HSPs)
scaffold0154 (5-186)||(30730-30913)
[»] scaffold0090 (1 HSPs)
scaffold0090 (6-186)||(18043-18225)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-183)||(3295-3479)
[»] scaffold0077 (1 HSPs)
scaffold0077 (1-183)||(3624-3807)
[»] scaffold0127 (1 HSPs)
scaffold0127 (131-236)||(10239-10344)
[»] scaffold0001 (1 HSPs)
scaffold0001 (131-236)||(492978-493082)
[»] scaffold0796 (2 HSPs)
scaffold0796 (76-227)||(1691-1841)
scaffold0796 (76-227)||(5714-5864)
[»] scaffold1318 (1 HSPs)
scaffold1318 (131-236)||(1862-1967)
[»] scaffold0456 (2 HSPs)
scaffold0456 (103-186)||(904-987)
scaffold0456 (103-186)||(8049-8132)
[»] scaffold0023 (2 HSPs)
scaffold0023 (131-236)||(135438-135543)
scaffold0023 (151-187)||(163352-163388)
[»] scaffold0129 (1 HSPs)
scaffold0129 (76-187)||(45273-45384)
[»] scaffold0053 (1 HSPs)
scaffold0053 (131-236)||(79439-79545)
[»] scaffold0720 (1 HSPs)
scaffold0720 (131-236)||(3352-3457)
[»] scaffold0222 (1 HSPs)
scaffold0222 (121-185)||(16811-16875)
[»] scaffold0004 (2 HSPs)
scaffold0004 (121-185)||(116887-116951)
scaffold0004 (151-184)||(60441-60474)
[»] scaffold0072 (1 HSPs)
scaffold0072 (131-236)||(49919-50025)
[»] scaffold0310 (1 HSPs)
scaffold0310 (130-187)||(17643-17700)
[»] scaffold0131 (1 HSPs)
scaffold0131 (131-236)||(997-1101)
[»] scaffold0107 (1 HSPs)
scaffold0107 (130-187)||(40530-40587)
[»] scaffold0019 (1 HSPs)
scaffold0019 (130-187)||(135473-135530)
[»] scaffold0461 (1 HSPs)
scaffold0461 (121-185)||(8-72)
[»] scaffold0348 (1 HSPs)
scaffold0348 (131-199)||(9336-9404)
[»] scaffold0146 (1 HSPs)
scaffold0146 (121-185)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (121-185)||(101928-101992)
[»] scaffold0235 (1 HSPs)
scaffold0235 (132-184)||(22594-22646)
[»] scaffold0124 (2 HSPs)
scaffold0124 (130-185)||(34276-34331)
scaffold0124 (129-187)||(35437-35495)
[»] scaffold0609 (1 HSPs)
scaffold0609 (121-236)||(5806-5922)
[»] scaffold0138 (1 HSPs)
scaffold0138 (129-185)||(12296-12352)
[»] scaffold0317 (1 HSPs)
scaffold0317 (122-185)||(1378-1441)
[»] scaffold0139 (1 HSPs)
scaffold0139 (130-185)||(14997-15052)
[»] scaffold0261 (1 HSPs)
scaffold0261 (131-191)||(23564-23624)
[»] scaffold0249 (1 HSPs)
scaffold0249 (133-201)||(13879-13947)
[»] scaffold0815 (1 HSPs)
scaffold0815 (134-185)||(1453-1504)
[»] scaffold0096 (1 HSPs)
scaffold0096 (129-184)||(39508-39563)
[»] scaffold0384 (1 HSPs)
scaffold0384 (133-227)||(16023-16117)
[»] scaffold0335 (1 HSPs)
scaffold0335 (129-185)||(2628-2684)
[»] scaffold0453 (1 HSPs)
scaffold0453 (131-190)||(10546-10605)
[»] scaffold2054 (1 HSPs)
scaffold2054 (97-186)||(680-770)
[»] scaffold0481 (1 HSPs)
scaffold0481 (139-184)||(676-721)
[»] scaffold0962 (1 HSPs)
scaffold0962 (151-187)||(614-650)
[»] scaffold0600 (1 HSPs)
scaffold0600 (129-185)||(732-788)
[»] scaffold0422 (1 HSPs)
scaffold0422 (135-187)||(3962-4014)
[»] scaffold0181 (1 HSPs)
scaffold0181 (151-187)||(25519-25555)
[»] scaffold0180 (1 HSPs)
scaffold0180 (136-185)||(11630-11681)
[»] scaffold0034 (1 HSPs)
scaffold0034 (131-183)||(73285-73337)
[»] scaffold0031 (2 HSPs)
scaffold0031 (129-185)||(121902-121958)
scaffold0031 (129-185)||(132778-132834)
[»] scaffold0028 (1 HSPs)
scaffold0028 (133-185)||(69749-69801)


Alignment Details
Target: scaffold0553 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 10381 - 10145
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||    
T  10381 acagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccaca 10282  T
Q  101 atttattttccaaaat-tatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagaca 199  Q
    |||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  10281 atttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagaca 10182  T
Q  200 aaaagcacagcaaatccgttcctaagttcttctctct 236  Q
    |||||||||||||||||||||||||||||||||||||    
T  10181 aaaagcacagcaaatccgttcctaagttcttctctct 10145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 1711 - 1475
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||    
T  1711 acagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccaca 1612  T
Q  101 atttattttccaaaat-tatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagaca 199  Q
    |||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  1611 atttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagaca 1512  T
Q  200 aaaagcacagcaaatccgttcctaagttcttctctct 236  Q
    |||||||||||||||||||||||||||||||||||||    
T  1511 aaaagcacagcaaatccgttcctaagttcttctctct 1475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 23370691 - 23370455
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||    
T  23370691 acagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccaca 23370592  T
Q  101 atttattttccaaaat-tatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagaca 199  Q
    |||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  23370591 atttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagaca 23370492  T
Q  200 aaaagcacagcaaatccgttcctaagttcttctctct 236  Q
    |||||||||||||||||||||||||||||||||||||    
T  23370491 aaaagcacagcaaatccgttcctaagttcttctctct 23370455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 9534198 - 9534382
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||| |||||||||||||||||||||||||    
T  9534198 acagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattccactcagaatcatcatcaaaccctaaccctca 9534297  T
Q  101 atttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9534298 atttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 8 - 185
Target Start/End: Complemental strand, 14762936 - 14762758
Alignment:
Q  8 agattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaatttat 106  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||  |||| || |||||||||||||||||||||||||||||||    
T  14762936 agattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat 14762837  T
Q  107 tttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14762836 cttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 20247967 - 20247791
Alignment:
Q  8 agattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaatttat 106  Q
    |||||||||||||||||| ||||||| ||||||| | |||||||||||||| |||||||  |||| || |||||||||||||||||||||||||||||||    
T  20247967 agattaagttttcattctgaacattatattacaagaaaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat 20247868  T
Q  107 tttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 183  Q
     |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247867 cttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 24192825 - 24193009
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctc 99  Q
    |||| |||||||||||||||||||| ||||| ||||||||| |||||||||||||||| |||||||  |||| || ||||||||||||||||||||||||    
T  24192825 acagcatagattaagttttcattctgaacatcacattacaacagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctc 24192924  T
Q  100 aatttattttccaaaat-tatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 183  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24192925 aatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 38310978 - 38310802
Alignment:
Q  8 agattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaatttat 106  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||  |||| || |||||||||||||||||||||||||||||||    
T  38310978 agattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat 38310879  T
Q  107 tttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 183  Q
     |||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38310878 cttccaaaactatgcaattaggtcaatattcagaaattatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 194
Target Start/End: Complemental strand, 24933937 - 24933820
Alignment:
Q  76 aatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 175  Q
    |||||||||||||||||||   |||  ||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24933937 aatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 24933839  T
Q  176 ccttaccttagaattgtag 194  Q
    |||||||||||||||||||    
T  24933838 ccttaccttagaattgtag 24933820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 17131732 - 17131837
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttctt 17131831  T
Q  231 ctctct 236  Q
    ||||||    
T  17131832 ctctct 17131837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 4 - 183
Target Start/End: Complemental strand, 55499285 - 55499104
Alignment:
Q  4 gtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctcaatt 103  Q
    |||||||||||| ||||||||  ||||| ||||||||| | |||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  55499285 gtatagattaagatttcattccgaacatcacattacaacataattaacatgatcattacccattcccctcagaatcatcatcaaaccctaaccctcaatt 55499186  T
Q  104 tattttccaaaattatgcaattaggtcaatttt-cagaaattatagattat-gattattgagagatagtctcacccttacct 183  Q
    |  |   |||  ||| ||| ||||||||||||| | ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  55499185 ttatcctcaaggttaagcagttaggtcaattttcccgaaattacatattatctattaatgagagatagtctcacccttacct 55499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 16801648 - 16801467
Alignment:
Q  5 tatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatac-ccatacccctcataatcatcatcaaaccctaaccctcaatt 103  Q
    ||||| |||||  |||||||||||||| ||||||||  | | |||||||||||| ||| |||| | ||||| |||||||||||| |||||||| ||||||    
T  16801648 tataggttaagaattcattctaaacatcacattacagcatatttaacatgatcattacaccattctcctcaaaatcatcatcaa-ccctaaccttcaatt 16801550  T
Q  104 t-attttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    | || ||| |||  || ||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  16801549 ttatcttcaaaagctaagcaatcaggtcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttag 16801467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 41455178 - 41455097
Alignment:
Q  104 tattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41455178 tattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 41455097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 14865846 - 14865951
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||| ||||||||||||| ||||||||||||||    
T  14865846 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagttctt 14865945  T
Q  231 ctctct 236  Q
    ||||||    
T  14865946 ctctct 14865951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 12033499 - 12033395
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | |||| ||||||||| |||||| ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacatcaaatcagttcctaagttctt 12033401  T
Q  231 ctctct 236  Q
    ||||||    
T  12033400 ctctct 12033395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 13302295 - 13302195
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||||||||  ||| ||||| ||||||||||| ||||||| |||| |    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttagaattgt--agaaaaaaaacacagcaaatcagttcctaggttcat 13302198  T
Q  231 ctc 233  Q
    |||    
T  13302197 ctc 13302195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 13323842 - 13323742
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||||||||||| | |||||   ||||||||| ||||||| ||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttagaattgtagaaaaaaaaa--tcagcaaatcagttcctaggttctt 13323745  T
Q  231 ctc 233  Q
    |||    
T  13323744 ctc 13323742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 13312951 - 13312851
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    |||||||| |||||| | |||||||||||||| ||||| |||||||||||||||||||||||  ||| ||||| ||||||||||| ||||||| |||| |    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttagaattgt--agaaaaaaaacacagcaaatcagttcctaggttcat 13312854  T
Q  231 ctc 233  Q
    |||    
T  13312853 ctc 13312851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  124 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 17240577 - 17240513
Alignment:
Q  121 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 76 - 201
Target Start/End: Complemental strand, 10389553 - 10389428
Alignment:
Q  76 aatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 175  Q
    |||||||||||||||||||   |||  ||||| |  |||| ||| ||||||| | | ||||||||||||||| ||||| || ||||| ||||| || |||    
T  10389553 aatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccac 10389454  T
Q  176 ccttaccttagaattgtagagacaaa 201  Q
    |||||||||||||||| | |||||||    
T  10389453 ccttaccttagaattgcaaagacaaa 10389428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 76 - 201
Target Start/End: Complemental strand, 10414642 - 10414517
Alignment:
Q  76 aatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 175  Q
    |||||||||||||||||||   |||  ||||| |  |||| ||| ||||||| | | ||||||||||||||| ||||| || ||||| ||||| || |||    
T  10414642 aatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccac 10414543  T
Q  176 ccttaccttagaattgtagagacaaa 201  Q
    |||||||||||||||| | |||||||    
T  10414542 ccttaccttagaattgcaaagacaaa 10414517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 76 - 201
Target Start/End: Complemental strand, 10421312 - 10421187
Alignment:
Q  76 aatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 175  Q
    |||||||||||||||||||   |||  ||||| |  |||| ||| ||||||| | | ||||||||||||||| ||||| || ||||| ||||| || |||    
T  10421312 aatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccac 10421213  T
Q  176 ccttaccttagaattgtagagacaaa 201  Q
    |||||||||||||||| | |||||||    
T  10421212 ccttaccttagaattgcaaagacaaa 10421187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 51301589 - 51301649
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 191  Q
    ||||||||||||||| | |||||||||||||  ||||| ||||||||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttagaattg 51301649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 19235121 - 19235020
Alignment:
Q  133 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttct 232  Q
    ||||||||||| ||| ||||| | |||||| ||||| || ||||||||||||||||||| | ||  | ||||  |||||||||  |||||||| ||||||    
T  19235121 ttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaag--ataaagtgcagcaaatcaattcctaagctcttct 19235024  T
Q  233 ctct 236  Q
    ||||    
T  19235023 ctct 19235020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 23392854 - 23392818
Alignment:
Q  151 tatgattattgagagatagtctcacccttaccttaga 187  Q
    ||||||||||||||| |||||||||||||||||||||    
T  23392854 tatgattattgagagttagtctcacccttaccttaga 23392818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 16801027 - 16801081
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 183  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  16801027 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 16801081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 2247685 - 2247648
Alignment:
Q  150 ttatgattattgagagatagtctcacccttaccttaga 187  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  2247685 ttataattattgagagttagtctcacccttaccttaga 2247648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 52212466 - 52212430
Alignment:
Q  151 tatgattattgagagatagtctcacccttaccttaga 187  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  52212466 tatgattattgagagttagcctcacccttaccttaga 52212430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 178; Significance: 5e-96; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 38144721 - 38144536
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  38144721 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctca 38144622  T
Q  101 atttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38144621 atttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 38144536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 28370239 - 28370055
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  28370239 acagtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctca 28370140  T
Q  101 atttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28370139 atttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 19512256 - 19512441
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  19512256 acagtatagattaagttttcattctaaacattacgttacaatagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctca 19512355  T
Q  101 atttattttcc-aaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    |||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19512356 atttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 22751018 - 22751197
Alignment:
Q  8 agattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaatttat 106  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||  |||| || |||||||||||||||||||||||||||||||    
T  22751018 agattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat 22751117  T
Q  107 tttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  22751118 cttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttag 22751197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 23528577 - 23528686
Alignment:
Q  76 aatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 175  Q
    ||||||||||||||||||||  |||  ||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23528577 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 23528675  T
Q  176 ccttaccttag 186  Q
    |||||||||||    
T  23528676 ccttaccttag 23528686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 19236900 - 19237005
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttctt 19236999  T
Q  231 ctctct 236  Q
    ||||||    
T  19237000 ctctct 19237005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 22461158 - 22461261
Alignment:
Q  133 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttct 232  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | |||||||| |||||||||||| |||| |||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaggcacagcaaatcagttcttaagttcttct 22461257  T
Q  233 ctct 236  Q
    ||||    
T  22461258 ctct 22461261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 22467782 - 22467885
Alignment:
Q  133 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttct 232  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | |||||||| |||||||||||| |||| |||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaggcacagcaaatcagttcttaagttcttct 22467881  T
Q  233 ctct 236  Q
    ||||    
T  22467882 ctct 22467885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 18408008 - 18407944
Alignment:
Q  121 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 22438803 - 22438746
Alignment:
Q  130 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 187  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttaga 22438746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 23111264 - 23111200
Alignment:
Q  121 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 20781744 - 20781847
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||| ||| ||||| |||||||| ||||| || ||||||||||||||||||| | ||  | |||| ||||||||||  |||||||| ||||    
T  20781744 aattttcagaaatcatatattataattattgaaagataatcccacccttaccttagaattgcaaag--ataaagtacagcaaatcaattcctaagctctt 20781841  T
Q  231 ctctct 236  Q
    ||||||    
T  20781842 ctctct 20781847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 20772969 - 20773072
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||| ||| ||||| | |||||| ||||| || ||||||||||||||||||| | ||  | |||| ||||||||||  |||||||| ||||    
T  20772969 aattttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaag--ataaagtacagcaaatcaattcctaagctctt 20773066  T
Q  231 ctctct 236  Q
    ||||||    
T  20773067 ctctct 20773072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 28909344 - 28909240
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||| ||| | ||| | |||||| ||||  || ||||||||||||||||||| |  ||||||| ||||||||||||  |||||| ||||||    
T  28909344 aattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaaaa-gcacagcaaatcaattcctaggttctt 28909246  T
Q  231 ctctct 236  Q
    ||||||    
T  28909245 ctctct 28909240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 28945739 - 28945635
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||| ||| | ||| | |||||| ||||  || ||||||||||||||||||| |  ||||||| ||||||||||||  |||||| ||||||    
T  28945739 aattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaaaa-gcacagcaaatcaattcctaggttctt 28945641  T
Q  231 ctctct 236  Q
    ||||||    
T  28945640 ctctct 28945635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 28896096 - 28895992
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||| ||| | ||| | |||||| ||||  || ||||||||||||||||||| |  | | ||||||||||||||||  |||||| ||||||    
T  28896096 aattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggc-aaaagcacagcaaatcaattcctaggttctt 28895998  T
Q  231 ctctct 236  Q
    ||||||    
T  28895997 ctctct 28895992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 28924922 - 28924818
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||| ||| | ||| | |||||| ||||  || ||||||||||||||||||| |  | | ||||||||||||||||  |||||| ||||||    
T  28924922 aattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggc-aaaagcacagcaaatcaattcctaggttctt 28924824  T
Q  231 ctctct 236  Q
    ||||||    
T  28924823 ctctct 28924818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 34830086 - 34830144
Alignment:
Q  132 attttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 191  Q
    |||||||||||||||| ||||  |||||||| ||||| || |||||||||||||||||||    
T  34830086 attttcagaaattatacattaa-attattgaaagataatcccacccttaccttagaattg 34830144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 187
Target Start/End: Complemental strand, 17021942 - 17021912
Alignment:
Q  157 tattgagagatagtctcacccttaccttaga 187  Q
    |||||||||||||||||||||||||||||||    
T  17021942 tattgagagatagtctcacccttaccttaga 17021912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 21663177 - 21663141
Alignment:
Q  151 tatgattattgagagatagtctcacccttaccttaga 187  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  21663177 tatgattattgagagttagcctcacccttaccttaga 21663141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 22356938 - 22356902
Alignment:
Q  151 tatgattattgagagatagtctcacccttaccttaga 187  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  22356938 tatgattattgagagttagcctcacccttaccttaga 22356902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 175; Significance: 3e-94; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 111556 - 111746
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  111556 acagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctca 111655  T
Q  101 atttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 191  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111656 atttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 111746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 12029 - 11850
Alignment:
Q  8 agattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaatttat 106  Q
    |||||||||||||||||| || |||| ||||||| |||||||||||||||| |||||||  |||| || |||||||||||||||||||| ||||||||||    
T  12029 agattaagttttcattctgaagattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaatttat 11930  T
Q  107 tttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11929 tttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 173; Significance: 5e-93; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 44477493 - 44477693
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  44477493 acagtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctca 44477592  T
Q  101 atttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaa 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  44477593 atttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaa 44477692  T
Q  201 a 201  Q
    |    
T  44477693 a 44477693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 44492651 - 44492851
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  44492651 acagtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctca 44492750  T
Q  101 atttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaa 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  44492751 atttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaa 44492850  T
Q  201 a 201  Q
    |    
T  44492851 a 44492851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 8727918 - 8727735
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  8727918 acagtatagattaagttttcattctgaacattacattacaacagaattaacatgatcaatacccatacccctcagaatcatcgtcaaaccctaaccctca 8727819  T
Q  101 atttattttcc-aaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 183  Q
    |||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  8727818 atttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 23866491 - 23866670
Alignment:
Q  8 agattaagttttcattctaaacattacattacaa-tagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaattta 105  Q
    |||||||||||  ||||| ||||||| ||||||| ||||||||||||||||| |||||||  | || |||||||||||||||||||||||||||||||||    
T  23866491 agattaagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattta 23866590  T
Q  106 ttttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    |||||||||| |||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  23866591 ttttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 23866670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 24320725 - 24320620
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttctt 24320626  T
Q  231 ctctct 236  Q
    ||||||    
T  24320625 ctctct 24320620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 27941039 - 27940946
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaa 94  Q
    |||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  27941039 acagtatagattaaattttcattctgaacattacattacaacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaa 27940946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 76 - 184
Target Start/End: Original strand, 17054537 - 17054644
Alignment:
Q  76 aatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 175  Q
    ||||||||||||||||||||  |||  ||||||||||||| ||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  17054537 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcac 17054635  T
Q  176 ccttacctt 184  Q
    |||||||||    
T  17054636 ccttacctt 17054644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 23482117 - 23482053
Alignment:
Q  121 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 18614271 - 18614327
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  18614271 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 25111976 - 25112041
Alignment:
Q  130 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtaga 195  Q
    |||||||||||| ||| | | ||| ||||||||||||||||||||||||||||||||| |||||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtaga 25112041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 29643440 - 29643386
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 14056619 - 14056562
Alignment:
Q  130 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 187  Q
    |||||||||||| ||| | | ||| |||||||||||||||||||||||||||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttaga 14056562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 165; Significance: 3e-88; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 6483588 - 6483772
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  6483588 acagtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctca 6483687  T
Q  101 atttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6483688 atttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 6487055 - 6487239
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  6487055 acagtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctca 6487154  T
Q  101 atttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6487155 atttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 5 - 185
Target Start/End: Complemental strand, 19661634 - 19661454
Alignment:
Q  5 tatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctcaattt 104  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  19661634 tatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattt 19661535  T
Q  105 attttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    || |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  19661534 atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttacctta 19661454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 26583702 - 26583882
Alignment:
Q  5 tatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctcaattt 104  Q
    ||||||||| |  |||||||| ||||| || |||||| | | |||||||||||| ||||| | ||||||| |||||||||||| ||||||||||||||||    
T  26583702 tatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattaccctttcccctcagaatcatcatcaagccctaaccctcaattt 26583801  T
Q  105 attttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26583802 attttccaaaactatgcaattaggtcaa-tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 26583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 23101648 - 23101463
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    ||||||||||||||| ||||||||  ||| | ||||||||| | |||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||    
T  23101648 acagtatagattaagatttcattccgaacgtcacattacaacataattaacatgatcattacccattcccctcagaatcatcatcaaaccctaaccctca 23101549  T
Q  101 atttattttccaaaattatgcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacctta 185  Q
    ||||  |   |||  |||  ||||||||||||||||| ||||||| | |||||  |||| ||||||||||||||||||||||||||    
T  23101548 attttatcctcaaggttaaacaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 23089240 - 23089057
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    ||||||||||||||| ||||||||  ||| | ||||||||| | |||||||||||||| ||||||| ||||| | |||||||||||||||||||||||||    
T  23089240 acagtatagattaagatttcattccgaacgtcacattacaacataattaacatgatcattacccattccccttagaatcatcatcaaaccctaaccctca 23089141  T
Q  101 atttattttccaaaattatgcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacct 183  Q
    ||||  |   |||  ||| |||||||||||||||||| ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  23089140 attttatcctcaaggttaagcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 23878878 - 23879060
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaata-cccatacccctcataatcatcatcaaaccctaaccctc 99  Q
    ||||||||||||||| ||||||||| ||||| ||||||||| | |||||||||||||| || ||||| ||||||| |||||||| | |||||||||||||    
T  23878878 acagtatagattaagatttcattctgaacatcacattacaacataattaacatgatcattaccccattcccctcagaatcatcaac-aaccctaaccctc 23878976  T
Q  100 aatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 183  Q
    |||||| |   |||  ||| |||||||||||||||||  ||||||||| || || |||| ||||||||||||||||||||||||    
T  23878977 aatttaatcctcaaggttaagcaattaggtcaatttttcgaaattatatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 26885183 - 26885287
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||||| |||| ||||||||| ||||| || ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  26885183 aattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcagagacaaaaagcacatcaaatccgttcctaagttctt 26885281  T
Q  231 ctctct 236  Q
    ||||||    
T  26885282 ctctct 26885287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 131 - 235
Target Start/End: Complemental strand, 25180984 - 25180880
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttctt 25180885  T
Q  231 ctctc 235  Q
    |||||    
T  25180884 ctctc 25180880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 27207774 - 27207669
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||||| ||||  || ||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  27207774 aattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagttctt 27207675  T
Q  231 ctctct 236  Q
    ||||||    
T  27207674 ctctct 27207669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 131 - 233
Target Start/End: Original strand, 10577 - 10679
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||  | ||||||||||||||||||||| |||||||||| |||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaatttcaaagacaaaaagcacagcaaatcagttcctaagtcctt 10676  T
Q  231 ctc 233  Q
    |||    
T  10677 ctc 10679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 5706133 - 5706018
Alignment:
Q  76 aatcatcatcaaaccctaaccctca-atttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 174  Q
    |||||||||||||||||||   ||| |||  ||||| |||| ||| |||||||||||| |||||| |||||||||||||||||| |||||||||||||||    
T  5706133 aatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattaatgagagatagtctca 5706035  T
Q  175 cccttaccttagaattg 191  Q
    |||||||||||||||||    
T  5706034 cccttaccttagaattg 5706018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 23168351 - 23168249
Alignment:
Q  133 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttct 232  Q
    ||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||||||| ||| || |||||||||||||| |||| |||||||||||||    
T  23168351 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaac-aaaagcacagcaaaaccgtccctaagttcttct 23168253  T
Q  233 ctct 236  Q
    ||||    
T  23168252 ctct 23168249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 23579608 - 23579506
Alignment:
Q  133 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttct 232  Q
    ||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||||||| ||| || |||||||||||||| |||| |||||||||||||    
T  23579608 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaac-aaaagcacagcaaaaccgtccctaagttcttct 23579510  T
Q  233 ctct 236  Q
    ||||    
T  23579509 ctct 23579506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 23265133 - 23265197
Alignment:
Q  121 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 23280201 - 23280265
Alignment:
Q  121 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  124 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 155; Significance: 3e-82; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 14422858 - 14423040
Alignment:
Q  5 tatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctcaattt 104  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  14422858 tatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaattt 14422957  T
Q  105 attttcc-aaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    || |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14422958 atcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 14423040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 16009447 - 16009631
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| ||    
T  16009447 acagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccttaacccaca 16009546  T
Q  101 atttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    |||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16009547 atttatcttccaaaaccatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 10895969 - 10895795
Alignment:
Q  8 agattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctcaatttatt 107  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||     
T  10895969 agattaagttttcattctgaacattatattacaagagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatc 10895870  T
Q  108 ttcc-aaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttac 181  Q
    |||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10895869 ttccaaaaactatgcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 8 - 185
Target Start/End: Original strand, 15168052 - 15168230
Alignment:
Q  8 agattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaatttat 106  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||  |||| || |||||||||||||||||||||||||||||||    
T  15168052 agattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat 15168151  T
Q  107 tttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15168152 cttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 18873237 - 18873416
Alignment:
Q  8 agattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaatttat 106  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||  |||| || |||||||||||||||||||||||||||||||    
T  18873237 agattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat 18873336  T
Q  107 tttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  18873337 cttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttag 18873416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 12710022 - 12709843
Alignment:
Q  8 agattaagttttcattctaaacattacattacaa-tagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaattta 105  Q
    |||||||||||  ||||| ||||||| ||||||| ||||||||||||||||| |||||||  | || |||||||||||||||||||||||||||||||||    
T  12710022 agattaagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattta 12709923  T
Q  106 ttttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    |||||||||| |||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  12709922 ttttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 12709843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 13123093 - 13122914
Alignment:
Q  8 agattaagttttcattctaaacattacattacaa-tagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaattta 105  Q
    |||||||||||  ||||| ||||||| ||||||| ||||||||||||||||| |||||||  | || |||||||||||||||||||||||||||||||||    
T  13123093 agattaagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattta 13122994  T
Q  106 ttttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    |||||||||| |||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  13122993 ttttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 13122914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 6 - 186
Target Start/End: Original strand, 13743584 - 13743764
Alignment:
Q  6 atagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaattt 104  Q
    ||||||||||| |||| ||| ||||  | | ||||| | |||||||||||||| |||||||  | || ||||||||||||||||||||||||||||||||    
T  13743584 atagattaagtcttcaatctgaacagcataatacaagaaaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattt 13743683  T
Q  105 attttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    ||||||||||| |||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  13743684 attttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 13743764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 183
Target Start/End: Original strand, 16677167 - 16677348
Alignment:
Q  5 tatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatac-ccatacccctcataatcatcatcaaaccctaaccctcaatt 103  Q
    ||||||||| |  |||||||| ||||| || |||||| | | |||||||||||| ||| |||| | ||||| ||||||||||||||||||||||| ||||    
T  16677167 tatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaaccctaacccttaatt 16677266  T
Q  104 t-attttccaaaat-tatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 183  Q
    | || ||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16677267 ttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 183
Target Start/End: Original strand, 17651403 - 17651584
Alignment:
Q  5 tatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatac-ccatacccctcataatcatcatcaaaccctaaccctcaatt 103  Q
    ||||||||| |  |||||||| ||||| || |||||| | | |||||||||||| ||| |||| | ||||| ||||||||||||||||||||||| ||||    
T  17651403 tatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaaccctaacccttaatt 17651502  T
Q  104 t-attttccaaaat-tatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 183  Q
    | || ||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17651503 ttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 12590818 - 12590643
Alignment:
Q  9 gattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctcaatttattt 108  Q
    ||||||| ||||||||| ||||||| ||| ||| | || |||||| |||  ||| ||| ||  ||| ||||||||||||||||||||  |||  ||||||    
T  12590818 gattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcattcca-tcagaatcatcatcaaaccctaactttcatattattt 12590720  T
Q  109 tccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    ||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12590719 tccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 12590643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 13007378 - 13007487
Alignment:
Q  76 aatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 175  Q
    ||||||||||||||||||||  |||  ||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13007378 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 13007476  T
Q  176 ccttaccttag 186  Q
    |||||||||||    
T  13007477 ccttaccttag 13007487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 2971254 - 2971359
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttctt 2971353  T
Q  231 ctctct 236  Q
    ||||||    
T  2971354 ctctct 2971359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 14567203 - 14567309
Alignment:
Q  130 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttct 229  Q
    |||||||||||||  ||| ||||| || |||||  | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14567203 caattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttct 14567302  T
Q  230 tctctct 236  Q
    |||||||    
T  14567303 tctctct 14567309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 14319684 - 14319579
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||||| ||||  || ||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  14319684 aattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagttctt 14319585  T
Q  231 ctctct 236  Q
    ||||||    
T  14319584 ctctct 14319579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 20906516 - 20906411
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| |  |||||| ||| ||||||||||||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaggacaaatagctcagcaaatccgttcctaagttctt 20906417  T
Q  231 ctctct 236  Q
    ||||||    
T  20906416 ctctct 20906411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 29181164 - 29181058
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagc-aaatccgttcctaagttct 229  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||| |||||||| ||||| |||||||||||||    
T  29181164 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaaatcagttcctaagttct 29181065  T
Q  230 tctctct 236  Q
    |||||||    
T  29181064 tctctct 29181058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 134 - 236
Target Start/End: Original strand, 16091078 - 16091181
Alignment:
Q  134 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagc-aaatccgttcctaagttcttct 232  Q
    |||||||||||| | ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||| |||||||| ||||| ||||||||||||||||    
T  16091078 tttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaaatcagttcctaagttcttct 16091177  T
Q  233 ctct 236  Q
    ||||    
T  16091178 ctct 16091181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 14230781 - 14230886
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||||| ||||   | ||||| ||||| || ||||||||||||||||||| | |||||||||||||  ||||||||||||||||||||     
T  14230781 aattttcagaaattatacattaaattcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacgacaaatccgttcctaagttctc 14230880  T
Q  231 ctctct 236  Q
    ||||||    
T  14230881 ctctct 14230886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  130 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  130 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 20311107 - 20311050
Alignment:
Q  130 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 187  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttaga 20311050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 21231015 - 21230958
Alignment:
Q  130 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 187  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 21230958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 13679485 - 13679548
Alignment:
Q  122 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  13679485 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 31155396 - 31155464
Alignment:
Q  133 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaa 201  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||||||| | |||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 31155464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    |||||| ||||||| || | ||| |||||||||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||| ||||||||| ||||| || |||||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 831669 - 831633
Alignment:
Q  150 ttatgattattgagagatagtctcacccttaccttag 186  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttag 831633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 1196849 - 1196813
Alignment:
Q  150 ttatgattattgagagatagtctcacccttaccttag 186  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttag 1196813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 2465361 - 2465421
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 191  Q
    ||||||||||||| ||| ||||| ||||||||  |||  || |||||||||||||||||||    
T  2465361 aattttcagaaatcatatattatcattattgaaggatgatcccacccttaccttagaattg 2465421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 3857419 - 3857360
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 191  Q
    ||||||||||||| ||| ||||| |||||||| ||||  || |||||||||||||||||||    
T  3857419 aattttcagaaatcatatattatcattattga-agatgatcccacccttaccttagaattg 3857360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 34958578 - 34958614
Alignment:
Q  150 ttatgattattgagagatagtctcacccttaccttag 186  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttag 34958614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 152; Significance: 2e-80; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 10986366 - 10986175
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  10986366 acagtatagattaagttttcattctgaacattacattacaacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctca 10986267  T
Q  101 atttattttcc-aaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 191  Q
    |||||| |||| |||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10986266 atttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgaaagatagtctcacccttaccttagaattg 10986175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 23839068 - 23839253
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  23839068 acagtatagattaagttttcattctgaacattacattacaacagaattaacatgatcaatacccattccccttagaatcatcatcaaaccctaaccctca 23839167  T
Q  101 atttattttccaaa-attatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    |||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23839168 atttatcttccaaacactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 5 - 185
Target Start/End: Original strand, 4477731 - 4477912
Alignment:
Q  5 tatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctcaattt 104  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| |||||||||||||||||||||| ||||||    
T  4477731 tatagattaagttttcattctaaacattacattacaacagaattagcatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaattt 4477830  T
Q  105 attttcc-aaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    || |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4477831 atcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 29614325 - 29614146
Alignment:
Q  8 agattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaatttat 106  Q
    ||||||||||||||||||||||||| || ||||| |||||||||||||||| |||||||  |||| ||||||||||||||||||||||||||||||||||    
T  29614325 agattaagttttcattctaaacatt-caatacaagagaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttat 29614227  T
Q  107 ttt-ccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614226 ttttccaaaattatgcaactaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 29614146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 8 - 185
Target Start/End: Original strand, 23057815 - 23057993
Alignment:
Q  8 agattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaatttat 106  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||  |||| || |||||||||||||||||||||||||||||||    
T  23057815 agattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat 23057914  T
Q  107 tttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
     |||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  23057915 cttccaaaactatgcaattaggtcaattttcaggaattatagattatgattatcgagagatagtctcacccttacctta 23057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 18800311 - 18800493
Alignment:
Q  5 tatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctcaatt- 103  Q
    ||||||||||| ||||||| | ||||| ||||||||| |||||||||||||||| ||| ||| |||  || ||||||||||||||||||||||||||||     
T  18800311 tatagattaagatttcattttgaacatcacattacaacagaattaacatgatcattactcattccctccagaatcatcatcaaaccctaaccctcaattc 18800410  T
Q  104 tattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18800411 tattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacattag 18800493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 930229 - 930095
Alignment:
Q  52 atgatcaatacccatacccctcataatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagatt 151  Q
    ||||||| ||||||| ||| ||| || ||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||| ||||||||    
T  930229 atgatcattacccattcccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagatt 930130  T
Q  152 atgattattgagagatagtctcacccttaccttag 186  Q
    |||||||||||||||||||||||||||||||||||    
T  930129 atgattattgagagatagtctcacccttaccttag 930095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 34646743 - 34646655
Alignment:
Q  103 ttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 191  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34646743 ttattttccaaaattattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattg 34646655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 21565397 - 21565214
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    ||||||||||||||| ||||||||  ||| | ||||||||| | |||||||||||||| ||||||| ||||| | |||||||||||||||||||||||||    
T  21565397 acagtatagattaagatttcattccgaacgtcacattacaacataattaacatgatcattacccattccccttagaatcatcatcaaaccctaaccctca 21565298  T
Q  101 atttattttccaaaattatgcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacct 183  Q
    ||||  |   |||  ||| |||||||||||||||||| ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  21565297 attttatcctcaaggttaagcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctcacccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 12168309 - 12168418
Alignment:
Q  76 aatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 175  Q
    ||||||||||||||||||||  |||  ||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12168309 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 12168407  T
Q  176 ccttaccttag 186  Q
    |||||||||||    
T  12168408 ccttaccttag 12168418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 19287218 - 19287327
Alignment:
Q  76 aatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 175  Q
    ||||||||||||||||||||  |||  ||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19287218 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19287316  T
Q  176 ccttaccttag 186  Q
    |||||||||||    
T  19287317 ccttaccttag 19287327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 19785978 - 19785869
Alignment:
Q  76 aatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 175  Q
    ||||||||||||||||||||  ||| |||||||||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19785978 aatcatcatcaaaccctaactttcattttattttccaaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19785880  T
Q  176 ccttaccttag 186  Q
    |||||||||||    
T  19785879 ccttaccttag 19785869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 19878402 - 19878511
Alignment:
Q  76 aatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 175  Q
    ||||||||||||||||||||  |||  ||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19878402 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19878500  T
Q  176 ccttaccttag 186  Q
    |||||||||||    
T  19878501 ccttaccttag 19878511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 34640069 - 34639981
Alignment:
Q  103 ttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 191  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34640069 ttattttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattg 34639981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 19884178 - 19884287
Alignment:
Q  76 aatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 175  Q
    ||||||||||||||||||||  |||  ||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19884178 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19884276  T
Q  176 ccttaccttag 186  Q
    ||| |||||||    
T  19884277 cctaaccttag 19884287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 187
Target Start/End: Complemental strand, 25469808 - 25469703
Alignment:
Q  80 atcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctt 179  Q
    |||||||||||||||   |||  |||||||||||||  || ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  25469808 atcatcaaaccctaattttcatattattttccaaaaccattcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtctcaccctt 25469711  T
Q  180 accttaga 187  Q
    ||||||||    
T  25469710 accttaga 25469703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 20007999 - 20007897
Alignment:
Q  133 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttct 232  Q
    |||||| |||||||| ||||||| |||||| ||||  || ||||||||||||||||||| | |||| |||||||||||||||  ||||||||||||||||    
T  20007999 ttttcataaattatatattatgactattgaaagatgatcccacccttaccttagaattgcaaagac-aaaagcacagcaaatgagttcctaagttcttct 20007901  T
Q  233 ctct 236  Q
    ||||    
T  20007900 ctct 20007897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 236
Target Start/End: Original strand, 31252413 - 31252529
Alignment:
Q  121 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaa--aaagcacagcaaatccgt 218  Q
    ||||||| | ||||||||||||||||| ||||| || ||| | ||||| |||||||||||||||||||||| | ||||||  ||| |||||| |||| ||    
T  31252413 caattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttagaattgcaaagacaaagaaaacacagc-aatcggt 31252511  T
Q  219 tcctaagttcttctctct 236  Q
    ||||||||||||||||||    
T  31252512 tcctaagttcttctctct 31252529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 24512899 - 24512842
Alignment:
Q  130 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 187  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttaga 24512842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 236
Target Start/End: Complemental strand, 11288758 - 11288620
Alignment:
Q  97 ctcaatttattttccaaaattatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtaga 195  Q
    |||||||||||||| | || ||| |  |||||| |||||| ||||||||||| |||| ||| ||||| ||||| || |||||||||||||||||||   |    
T  11288758 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagaattgccaa 11288659  T
Q  196 gacaaaaagcacagcaaatccgttcctaagttcttctctct 236  Q
    |||||||| |||||| |||| ||||||||| ||||||||||    
T  11288658 gacaaaaa-cacagc-aatcagttcctaagctcttctctct 11288620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 28288537 - 28288461
Alignment:
Q  158 attgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttctctct 236  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| |||||| |||| ||||||||| | ||||||||    
T  28288537 attgagagatagtctcacccttaccttagaattgcaaagacaaaaa-cacagc-aatcagttcctaagcttttctctct 28288461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  133 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 183  Q
    |||||||||||||| |||| |||||||| |||||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 21364537 - 21364433
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||| ||| ||||| |||| |||  |||| || |||||||||||| |||||| | |||| |||||||||||||| |  |||||| ||||||    
T  21364537 aattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagac-aaaagcacagcaaaacaattcctaggttctt 21364439  T
Q  231 ctctct 236  Q
    ||||||    
T  21364438 ctctct 21364433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 23968519 - 23968415
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||| ||| ||||| |||| |||  |||| || |||||||||||| |||||| | |||| |||||||||||||| |  |||||| ||||||    
T  23968519 aattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagac-aaaagcacagcaaaacaattcctaggttctt 23968421  T
Q  231 ctctct 236  Q
    ||||||    
T  23968420 ctctct 23968415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 15458492 - 15458560
Alignment:
Q  133 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaa 201  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||||||| | |||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 15458560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 15465087 - 15465155
Alignment:
Q  133 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaa 201  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||||||| | |||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 15465155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 9099124 - 9099023
Alignment:
Q  133 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttct 232  Q
    ||||||||||| ||| ||||| | |||||| ||||| || ||||||||||||||||||| | ||  | ||||  |||||||||  |||||||| ||||||    
T  9099124 ttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaag--ataaagtgcagcaaatcaattcctaagctcttct 9099027  T
Q  233 ctct 236  Q
    ||||    
T  9099026 ctct 9099023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||| ||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 2286823 - 2286769
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 183  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  2286823 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 2286769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 185
Target Start/End: Original strand, 18659450 - 18659484
Alignment:
Q  151 tatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||||| |||||||||||||||||||    
T  18659450 tatgattattgagagttagtctcacccttacctta 18659484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 185
Target Start/End: Original strand, 24441673 - 24441707
Alignment:
Q  151 tatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||||| |||||||||||||||||||    
T  24441673 tatgattattgagagttagtctcacccttacctta 24441707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 29847314 - 29847278
Alignment:
Q  151 tatgattattgagagatagtctcacccttaccttaga 187  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  29847314 tatgattattgagagttagcctcacccttaccttaga 29847278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 3e-79; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 20437209 - 20437024
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    ||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  20437209 acagtatagattaagttttcattctgaacattacattacaacataattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctca 20437110  T
Q  101 atttattttcc-aaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    |||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20437109 atttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 41111981 - 41112090
Alignment:
Q  76 aatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 175  Q
    ||||||||||||||||||||  |||  ||||||| ||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41111981 aatcatcatcaaaccctaactttcatcttatttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 41112079  T
Q  176 ccttaccttag 186  Q
    |||||||||||    
T  41112080 ccttaccttag 41112090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 20851187 - 20851082
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttctt 20851088  T
Q  231 ctctct 236  Q
    ||||||    
T  20851087 ctctct 20851082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 20857814 - 20857709
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttctt 20857715  T
Q  231 ctctct 236  Q
    ||||||    
T  20857714 ctctct 20857709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 21706276 - 21706381
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttctt 21706375  T
Q  231 ctctct 236  Q
    ||||||    
T  21706376 ctctct 21706381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 21710818 - 21710923
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttctt 21710917  T
Q  231 ctctct 236  Q
    ||||||    
T  21710918 ctctct 21710923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 32651563 - 32651627
Alignment:
Q  121 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  121 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  130 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  130 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 183  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 227
Target Start/End: Complemental strand, 20045004 - 20044910
Alignment:
Q  133 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagtt 227  Q
    ||||||||| ||||| |||| ||| |||||  |||| || ||||||||||||||||||||||  | ||  | ||||||||||| | |||||||||    
T  20045004 ttttcagaatttatatattaagatcattgaaggataatcccacccttaccttagaattgtaggaagaattaacacagcaaatcagctcctaagtt 20044910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 185
Target Start/End: Original strand, 24476350 - 24476380
Alignment:
Q  155 attattgagagatagtctcacccttacctta 185  Q
    |||||||||||||||||||||||||||||||    
T  24476350 attattgagagatagtctcacccttacctta 24476380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 185
Target Start/End: Complemental strand, 25091448 - 25091418
Alignment:
Q  155 attattgagagatagtctcacccttacctta 185  Q
    |||||||||||||||||||||||||||||||    
T  25091448 attattgagagatagtctcacccttacctta 25091418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 18271338 - 18271371
Alignment:
Q  151 tatgattattgagagatagtctcacccttacctt 184  Q
    ||||||||||||||| ||||||||||||||||||    
T  18271338 tatgattattgagagttagtctcacccttacctt 18271371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 18275992 - 18276025
Alignment:
Q  151 tatgattattgagagatagtctcacccttacctt 184  Q
    ||||||||||||||| ||||||||||||||||||    
T  18275992 tatgattattgagagttagtctcacccttacctt 18276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 129; Significance: 9e-67; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 111758 - 111938
Alignment:
Q  8 agattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaatttat 106  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||  |||| || |||||||||||||||||||||||||||||||    
T  111758 agattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat 111857  T
Q  107 tttccaaaattatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
     |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111858 cttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 91257 - 91197
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 191  Q
    ||||||||||||| ||| ||||| |||||||| ||||  || |||||||||||||||||||    
T  91257 aattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattg 91197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 96983 - 96923
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 191  Q
    ||||||||||||| ||| ||||| |||||||| ||||  || |||||||||||||||||||    
T  96983 aattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattg 96923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 1055 - 1233
Alignment:
Q  8 agattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaatttat 106  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||  |||| ||||||| ||||||||||||||||||||||||||    
T  1055 agattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttat 1154  T
Q  107 tttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    ||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1155 tttccaaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 1233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 50056 - 50234
Alignment:
Q  8 agattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaatttat 106  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||  |||| ||||||| ||||||||||||||||||||||||||    
T  50056 agattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttat 50155  T
Q  107 tttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    ||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  50156 tttccaaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 50234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 14582 - 14398
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctc 99  Q
    |||| |||||||||||||||||||  ||||| ||||||||| |||||||||||||||| |||||||  |||| || ||||||||||||||||||||||||    
T  14582 acagcatagattaagttttcattcggaacatcacattacaacagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctc 14483  T
Q  100 aatttattttccaaaat-tatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 183  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14482 aatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 11211 - 11397
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    ||||||| ||||||| ||||||| | ||||| ||||||||| |||||||||||||||| ||| ||| |||  || |||||||||||||||||||||||||    
T  11211 acagtatggattaagatttcattttgaacatcacattacaacagaattaacatgatcattactcattccctccagaatcatcatcaaaccctaaccctca 11310  T
Q  101 att-tattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    ||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11311 attctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 930 - 750
Alignment:
Q  8 agattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaatttat 106  Q
    |||||||||||| || || ||||||| ||||||| || |||| |||||||| |||||||  |||| ||||||| ||||||||||||||||||||||||||    
T  930 agattaagtttttatcctgaacattatattacaagagtattatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttat 831  T
Q  107 tttccaaaat-tatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  830 tttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 6 - 186
Target Start/End: Original strand, 167 - 346
Alignment:
Q  6 atagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctcaattta 105  Q
    ||||||||||| |||| ||| ||||  | | ||||| | |||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  167 atagattaagtcttcaatctgaacaccataatacaagaaaattaacatgatcattacccattcccctcagaatcatcatcaaaccctaaccctcaattta 266  T
Q  106 ttttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  267 ttttccaaaactatgcaattaggtcaa-tttcagaaattatagattatggttattgagagatagtctcacccttaccttag 346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 8751 - 8574
Alignment:
Q  9 gattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctcaatttattt 108  Q
    ||||||||||||||| | ||||||| ||||||| ||||||||||| |||| ||||||| ||  |||||||||||||||||||||||||||||| ||||||    
T  8751 gattaagttttcattttgaacattaaattacaagagaattaacataatcattacccattcca-tcataatcatcatcaaaccctaaccctcaaattattt 8653  T
Q  109 tccaaaattatgcaattaggtcaa-ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8652 tccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttaccttag 8574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 2074 - 1897
Alignment:
Q  9 gattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctcaatttattt 108  Q
    ||||||||||||||| | ||||||| ||||||| ||||||||||| |||| ||||||| ||  ||| |||||||||||||||||||||||||| ||||||    
T  2074 gattaagttttcattatgaacattaaattacaagagaattaacataatcattacccattcca-tcaaaatcatcatcaaaccctaaccctcaaattattt 1976  T
Q  109 tccaaaattatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    ||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1975 tccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttaccttag 1897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 1e-53; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 8046009 - 8045832
Alignment:
Q  9 gattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaatttatt 107  Q
    ||||||||||||||||| ||||||| ||||||| ||||||||||| |||  |||||||  |||| || |||  || ||||||||||||||||||||||||    
T  8046009 gattaagttttcattctgaacattatattacaagagaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctcaatttatt 8045910  T
Q  108 ttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8045909 ttccaaaactatgcaattaggtcaattt-cagaaattatagattatgattatcgagagatagtctcacccttaccttag 8045832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 8 - 186
Target Start/End: Original strand, 11847984 - 11848169
Alignment:
Q  8 agattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaatttat 106  Q
    |||||||||||||||||| ||||||| |||| || || ||||||||||||| ||||||| || || || |||| ||||||||||||||||||||||| ||    
T  11847984 agattaagttttcattctgaacattatattataaaaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgat 11848083  T
Q  107 tttc------caaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    |||       ||||| ||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11848084 tttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 11848169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 53483650 - 53483765
Alignment:
Q  76 aatcatcatcaaaccctaaccctca-atttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 174  Q
    |||||||||||||||||||   ||| |||  ||||| |||| ||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  53483650 aatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctca 53483748  T
Q  175 cccttaccttagaattg 191  Q
    |||||||||||||||||    
T  53483749 cccttaccttagaattg 53483765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 15408139 - 15408196
Alignment:
Q  130 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 187  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 15408196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 16146885 - 16146803
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaa 213  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||| |||||||||||    
T  16146885 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaa 16146803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 14486661 - 14486713
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 183  Q
    ||||||||||||||||| |||||||| |||||  |||||||||||||||||||    
T  14486661 aattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 27906266 - 27906326
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 191  Q
    ||||||||||||||||| |||||||| ||||| ||||| || |||||||| ||||||||||    
T  27906266 aattttcagaaattatacattatgatcattgaaagataatcccacccttatcttagaattg 27906326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcaccctta 180  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 14912081 - 14912139
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 187  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| ||||||||||||||    
T  14912081 tcaattttcagaagttatatattacaatcattgagagttagtctaacccttaccttaga 14912139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 185
Target Start/End: Original strand, 15069781 - 15069811
Alignment:
Q  155 attattgagagatagtctcacccttacctta 185  Q
    |||||||||||||||||||||||||||||||    
T  15069781 attattgagagatagtctcacccttacctta 15069811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 185
Target Start/End: Original strand, 15076381 - 15076411
Alignment:
Q  155 attattgagagatagtctcacccttacctta 185  Q
    |||||||||||||||||||||||||||||||    
T  15076381 attattgagagatagtctcacccttacctta 15076411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 15747592 - 15747556
Alignment:
Q  150 ttatgattattgagagatagtctcacccttaccttag 186  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttag 15747556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 5 - 186
Target Start/End: Original strand, 30730 - 30913
Alignment:
Q  5 tatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatac-ccatacccctcataatcatcatcaaaccctaaccctcaatt 103  Q
    ||||||||| |  ||||||||  |||| || |||||| | | |||||||||||  ||| |||| ||||||| ||||||||||||||||||| ||||||||    
T  30730 tatagattaggaattcattctgcacatcactttacaacatatttaacatgatcgttacaccattcccctcaaaatcatcatcaaaccctaatcctcaatt 30829  T
Q  104 t-attttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    | |  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30830 ttaccttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 30913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 6 - 186
Target Start/End: Original strand, 18043 - 18225
Alignment:
Q  6 atagattaagttttcattctaaacattacattacaat-agaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctcaattt 104  Q
    |||| |||||||||||||||  |||| |||||||||  ||||||||||||| || ||||  | ||| | | ||||||||| ||||| |||||||||||||    
T  18043 ataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattaccatttcccgttagaatcatcattaaaccttaaccctcaattt 18142  T
Q  105 attttccaaaat-tatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    ||||||| |||  || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18143 attttcctaaagctaagcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttaccttag 18225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 3479 - 3295
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgat-caatacccatacccctcataatcatcatcaaaccctaaccctc 99  Q
    ||||||||||||||| ||||||||| ||||| ||||||||| | |||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||    
T  3479 acagtatagattaagatttcattctgaacatcacattacaacaaaattaacatgattcattacccattcccctcagaatcatcatcaaaccctaaccctc 3380  T
Q  100 aatttattttccaaaattatgcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacct 183  Q
    |||||  |  ||||  ||| |||||||||||||||||| ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  3379 aattttatccccaaggttaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 3807 - 3624
Alignment:
Q  1 acagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccctca 100  Q
    ||||||||||||||| ||||||||  ||||| ||||||||| | |||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||    
T  3807 acagtatagattaagatttcattccgaacatcacattacaacataattaacatgatcattacccatccccctcagaatcatcatcaaaccctaaccctca 3708  T
Q  101 atttattttccaaaattatgcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctcacccttacct 183  Q
    ||||  |   |||  ||| |||||||||||||||||| ||||||| | |||||  |||| ||||||||||||||||||||||||    
T  3707 attttatcctcaaggttaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 10239 - 10344
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 10338  T
Q  231 ctctct 236  Q
    ||||||    
T  10339 ctctct 10344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 493082 - 492978
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||||| |||| ||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  493082 aattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcagagacaaaaagcacagcaaatccgttcctaagttctt 492984  T
Q  231 ctctct 236  Q
    ||||||    
T  492983 ctctct 492978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 76 - 227
Target Start/End: Complemental strand, 1841 - 1691
Alignment:
Q  76 aatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 175  Q
    ||||||||||||||||||||  |||  ||||||||||||| ||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  1841 aatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcac 1743  T
Q  176 ccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagtt 227  Q
    |||||||||||  ||||||  | ||  | ||||||||||| | |||||||||    
T  1742 ccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtt 1691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 76 - 227
Target Start/End: Complemental strand, 5864 - 5714
Alignment:
Q  76 aatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 175  Q
    ||||||||||||||||||||  |||  ||||||||||||| ||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  5864 aatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcac 5766  T
Q  176 ccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagtt 227  Q
    |||||||||||  ||||||  | ||  | ||||||||||| | |||||||||    
T  5765 ccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtt 5714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 1967 - 1862
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttacaattgcaaagacaaaaagcacagcaaatccgttcctaagttctt 1868  T
Q  231 ctctct 236  Q
    ||||||    
T  1867 ctctct 1862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 103 - 186
Target Start/End: Original strand, 904 - 987
Alignment:
Q  103 ttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    |||| |||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  904 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 103 - 186
Target Start/End: Original strand, 8049 - 8132
Alignment:
Q  103 ttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    |||| |||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8049 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 8132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 135438 - 135543
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||| ||||||||||||||| | ||||||| ||||||||||||| ||||||||| ||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagctctt 135537  T
Q  231 ctctct 236  Q
    ||||||    
T  135538 ctctct 135543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 163352 - 163388
Alignment:
Q  151 tatgattattgagagatagtctcacccttaccttaga 187  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  163352 tatgattattgagagttagcctcacccttaccttaga 163388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 187
Target Start/End: Complemental strand, 45384 - 45273
Alignment:
Q  76 aatcatcatcaaaccctaaccctca-atttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 174  Q
    |||||||||||||||||||   ||| |||  ||||| |||| ||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  45384 aatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctca 45286  T
Q  175 cccttaccttaga 187  Q
    |||||||||||||    
T  45285 cccttaccttaga 45273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 79545 - 79439
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagc-aaatccgttcctaagttct 229  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||| |||||||| ||||| |||||||||||||    
T  79545 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaaatcagttcctaagttct 79446  T
Q  230 tctctct 236  Q
    |||||||    
T  79445 tctctct 79439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 3457 - 3352
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||||||| ||||   | ||||| ||||| | |||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||     
T  3457 aattttcagaaattatatattaaattcattgaaagataatatcacccttaccttagaattgcaaagacaaaaagcacggcaaatccgttcctaagttctc 3358  T
Q  231 ctctct 236  Q
    ||||||    
T  3357 ctctct 3352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 16811 - 16875
Alignment:
Q  121 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 116887 - 116951
Alignment:
Q  121 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 60441 - 60474
Alignment:
Q  151 tatgattattgagagatagtctcacccttacctt 184  Q
    ||||||||||||||| ||||||||||||||||||    
T  60441 tatgattattgagagttagtctcacccttacctt 60474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 50025 - 49919
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagc-aaatccgttcctaagttct 229  Q
    |||||| |||||||| | ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||| |||||| | ||||| |||||||||||||    
T  50025 aatttttagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacaacaaaatcagttcctaagttct 49926  T
Q  230 tctctct 236  Q
    |||||||    
T  49925 tctctct 49919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 17643 - 17700
Alignment:
Q  130 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 187  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttaga 17700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 997 - 1101
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 230  Q
    ||||||||||||| ||| ||||| | |||||||||||  || ||||||||||||||||||| | |||| ||||||||||||||||  |||||| ||||||    
T  997 aattttcagaaatcatatattatcactattgagagatgatcccacccttaccttagaattgcaaagac-aaaagcacagcaaatcaattcctaggttctt 1095  T
Q  231 ctctct 236  Q
    ||||||    
T  1096 ctctct 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 40587 - 40530
Alignment:
Q  130 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 187  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 40530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 135473 - 135530
Alignment:
Q  130 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 187  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 135530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 72 - 8
Alignment:
Q  121 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 9336 - 9404
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagaca 199  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgtagagaca 9404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 13623 - 13687
Alignment:
Q  121 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 101992 - 101928
Alignment:
Q  121 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 22646 - 22594
Alignment:
Q  132 attttcagaaattatagattatgattattgagagatagtctcacccttacctt 184  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttacctt 22594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  130 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 35495 - 35437
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 187  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| ||||||||||||||    
T  35495 tcaattttcagaagttatacattacaatcattgagagttagtcttacccttaccttaga 35437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 236
Target Start/End: Complemental strand, 5922 - 5806
Alignment:
Q  121 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaa--aaagcacagcaaatccgt 218  Q
    ||||||| | ||||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||||||| | ||||||  ||| |||||| |||| ||    
T  5922 caattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaagaaaacacagc-aatcggt 5824  T
Q  219 tcctaagttcttctctct 236  Q
    |||  |||||||||||||    
T  5823 tccctagttcttctctct 5806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

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Target: scaffold0317 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 1378 - 1441
Alignment:
Q  122 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  1378 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

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Target: scaffold0139 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  130 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

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Target: scaffold0261 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 23624 - 23564
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 191  Q
    ||||||||||||||||| |||||||| ||| | ||||| || |||||||||||||||||||    
T  23624 aattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattg 23564  T

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Target: scaffold0249 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 13947 - 13879
Alignment:
Q  133 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaa 201  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||||||| | |||||||    
T  13947 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 13879  T

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Target: scaffold0815 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 1453 - 1504
Alignment:
Q  134 tttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    |||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttacctta 1504  T

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Target: scaffold0096 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 39563 - 39508
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctt 184  Q
    ||||||||| ||||||||| |||||||| |||||||| ||| ||||||||||||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctt 39508  T

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Target: scaffold0384 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 227
Target Start/End: Complemental strand, 16117 - 16023
Alignment:
Q  133 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagtt 227  Q
    ||||||||||| ||| ||||| | |||||| ||||| || ||||||||||||||||||||||  | ||  | ||||||||||| | |||||||||    
T  16117 ttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgtaggaagaattaacacagcaaatcagctcctaagtt 16023  T

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Target: scaffold0335 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

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Target: scaffold0453 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 10605 - 10546
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaatt 190  Q
    ||||||||||||||||| |||| ||| ||||| ||||| || ||| ||||||||||||||    
T  10605 aattttcagaaattatacattaagatcattgaaagataatcccacacttaccttagaatt 10546  T

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Target: scaffold2054 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 186
Target Start/End: Original strand, 680 - 770
Alignment:
Q  97 ctcaatttattttccaaaattatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 186  Q
    |||||||||||||| | || ||| |  |||||| |||||| ||||||||||| |||| ||| ||||| ||||| || ||||||||||||||    
T  680 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag 770  T

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Target: scaffold0481 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 184
Target Start/End: Complemental strand, 721 - 676
Alignment:
Q  139 gaaattatagattatgattattgagagatagtctcacccttacctt 184  Q
    ||||||||| |||| ||| |||||||| ||||||||||||||||||    
T  721 gaaattatacattaagatcattgagagttagtctcacccttacctt 676  T

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Target: scaffold0962 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 650 - 614
Alignment:
Q  151 tatgattattgagagatagtctcacccttaccttaga 187  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  650 tatgattattgagagttagcctcacccttaccttaga 614  T

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Target: scaffold0600 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 732 - 788
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| ||||||| |||||||    
T  732 tcaattttcagaagttatatattataatcattgagagttagcctcacccctacctta 788  T

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Target: scaffold0422 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 3962 - 4014
Alignment:
Q  135 ttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 187  Q
    ||||||| ||||| | ||||||||||||  | |||||||||||||||||||||    
T  3962 ttcagaatttatacactatgattattgaatgttagtctcacccttaccttaga 4014  T

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Target: scaffold0181 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 25555 - 25519
Alignment:
Q  151 tatgattattgagagatagtctcacccttaccttaga 187  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  25555 tatgattattgagagttagcctcacccttaccttaga 25519  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 11630 - 11681
Alignment:
Q  136 tcagaaattataga--ttatgattattgagagatagtctcacccttacctta 185  Q
    |||||||||||| |  |||| ||||||||||| |||||||||||||||||||    
T  11630 tcagaaattatataatttataattattgagagttagtctcacccttacctta 11681  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 73285 - 73337
Alignment:
Q  131 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 183  Q
    |||||||| |||||||| |||||||| ||||| ||||| || |||||||||||    
T  73285 aattttcataaattatacattatgatcattgaaagataatcccacccttacct 73337  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 121902 - 121958
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  121902 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 121958  T

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Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 132778 - 132834
Alignment:
Q  129 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  132778 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 132834  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 69749 - 69801
Alignment:
Q  133 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 185  Q
    |||||| |||||||| |||| ||| ||||| || |||||||||||||||||||    
T  69749 ttttcataaattatatattaagatcattgaaagttagtctcacccttacctta 69801  T

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