View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0912_low_35 (Length: 297)

Name: NF0912_low_35
Description: NF0912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0912_low_35
NF0912_low_35
[»] chr3 (1 HSPs)
chr3 (157-223)||(9016241-9016307)


Alignment Details
Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 9016241 - 9016307
Alignment:
157 gttaaacaagacacgttagggttatgattaaaatgtaatcctatgacaaattacatactttggcttt 223  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
9016241 gttaaacaagacacgttagggttatgactaaaatgtaatcctatgacaaattacatactttggcttt 9016307  T

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