View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0912_low_46 (Length: 266)
Name: NF0912_low_46
Description: NF0912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0912_low_46 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 30 - 266
Target Start/End: Original strand, 25707191 - 25707416
Alignment:
| Q |
30 |
aaagatacaatcaaacgtataataaaaccgatcttcatttcacaatatactttattattctattacaccttacaccttatataaaccttactacgtacaa |
129 |
Q |
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| T |
25707191 |
aaagatacaatcaaacgtataataaaaccaatcttcatttcacaatatactttattattctattacaccttacacct-----------tactacgtacaa |
25707279 |
T |
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| Q |
130 |
ctacaagttaaaaccaatcttcatttcataatattattcatctttaaataaaaagttgctgtcatttgttgataggggaatactacaatcacctgcattt |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25707280 |
ctacaagttaaaaccaatcttcatttcataatattattcatctttaaataaaaagttgctgtcatttgttgataggggaatactacaatcacctgcattt |
25707379 |
T |
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| Q |
230 |
agagcaataactttgttttgtatattcataaattcct |
266 |
Q |
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| T |
25707380 |
agagcaataactttgttttgtatattcataaattcct |
25707416 |
T |
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