View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0913_high_28 (Length: 331)
Name: NF0913_high_28
Description: NF0913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0913_high_28 |
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Alignment Details
Target: chr5 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 29 - 265
Target Start/End: Complemental strand, 5219014 - 5218778
Alignment:
| Q |
29 |
aaaaacaacttgggacggtccctacacaccaagttcaccacccaataccccctgtccttgcatctactaatagacacatgagtcccatcacacccctttt |
128 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5219014 |
aaaaacaacttgggacggtccctacacaccaagttcaccacccaataccccctgtccttgcatctactaatagacacatgagtcccatcacacccctttt |
5218915 |
T |
|
| Q |
129 |
tgtgatcgccgctactgtctccgtgacaggcacgacagccctcgtagtccctgtcggcatacattaactggtgaagccgtcgttcggtgtgtgtgcgccc |
228 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5218914 |
tgtgatcgccgctactgtctccgtgacaggcgcgacagccctcgtagtccctgtcggcatacattaactggtgaagccgtcgttcggtgtgtgtgcgccc |
5218815 |
T |
|
| Q |
229 |
ggcagcaaagtttctcaacctcacattgttcctctct |
265 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
5218814 |
ggcagcaaagtttctcaacctcacattgttcctctct |
5218778 |
T |
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