View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0913_high_38 (Length: 291)
Name: NF0913_high_38
Description: NF0913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0913_high_38 |
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Alignment Details
Target: chr4 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 30 - 278
Target Start/End: Original strand, 40866973 - 40867221
Alignment:
| Q |
30 |
tcttttgtgttttgttctcattgccacctttcttttcatgcaaaccctagcagatacttcatgcaccgattgttttgttcaatctcatgcatcattttac |
129 |
Q |
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| T |
40866973 |
tcttttgtgttttgttctcattgccacctttcttttcatgcaaaccctagcagatacttcatgcaccgattgttttgttcaatctcatgcatcattttac |
40867072 |
T |
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| Q |
130 |
ccaaactctgaagaaaacggcacagatagtaagaaaactgataaaaaataacaaaaatgcaaacatgaaatgatatttgtaaacatgttctctcttatat |
229 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
40867073 |
ccaaactctgaagaaaacggcacagatagtaagaaaactgataaaaaataacaaaaatgcaaacatgaaatgatatttgtaaacatgttctcttttatat |
40867172 |
T |
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| Q |
230 |
ttatgctcttttgaactcatttcagctggtgcatgtggatttggttcct |
278 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
40867173 |
ttatgctcttttgaattcatttcagctggtgcatgtggatttggttcct |
40867221 |
T |
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