View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0913_low_1 (Length: 858)

Name: NF0913_low_1
Description: NF0913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0913_low_1
NF0913_low_1
[»] chr3 (37 HSPs)
chr3 (195-566)||(2547343-2547713)
chr3 (636-858)||(2547079-2547301)
chr3 (636-858)||(15538971-15539193)
chr3 (641-858)||(10725901-10726117)
chr3 (637-856)||(5347320-5347539)
chr3 (637-858)||(19631923-19632142)
chr3 (637-838)||(13440050-13440250)
chr3 (638-858)||(16218878-16219088)
chr3 (644-858)||(27052373-27052587)
chr3 (636-858)||(10934404-10934626)
chr3 (636-858)||(19614337-19614561)
chr3 (636-770)||(40354386-40354520)
chr3 (637-858)||(19659825-19660035)
chr3 (756-856)||(12696608-12696708)
chr3 (637-856)||(12252769-12252988)
chr3 (460-564)||(19660108-19660212)
chr3 (459-570)||(16219156-16219266)
chr3 (372-564)||(27051345-27051535)
chr3 (637-791)||(30098729-30098883)
chr3 (756-839)||(15045225-15045308)
chr3 (270-342)||(16219934-16220006)
chr3 (460-564)||(19632215-19632315)
chr3 (504-564)||(15538838-15538898)
chr3 (219-308)||(9637244-9637333)
chr3 (219-308)||(17385786-17385875)
chr3 (752-856)||(4813913-4814016)
chr3 (267-338)||(15046261-15046331)
chr3 (276-338)||(11833506-11833568)
chr3 (276-338)||(46472769-46472831)
chr3 (476-557)||(10934245-10934326)
chr3 (196-249)||(25486601-25486654)
chr3 (301-347)||(5346363-5346409)
chr3 (258-348)||(8023289-8023379)
chr3 (258-304)||(19633006-19633052)
chr3 (276-333)||(10933497-10933554)
chr3 (512-561)||(14305661-14305710)
chr3 (267-308)||(38277998-38278039)
[»] chr4 (18 HSPs)
chr4 (637-858)||(15711344-15711565)
chr4 (636-858)||(11776149-11776370)
chr4 (637-856)||(21981882-21982099)
chr4 (636-855)||(17959794-17960010)
chr4 (636-858)||(16571127-16571336)
chr4 (637-791)||(12334697-12334851)
chr4 (637-753)||(9566500-9566616)
chr4 (460-561)||(17959627-17959728)
chr4 (270-346)||(11775304-11775380)
chr4 (258-338)||(16570477-16570557)
chr4 (216-331)||(12451735-12451849)
chr4 (637-836)||(12344096-12344284)
chr4 (488-564)||(11776002-11776078)
chr4 (636-736)||(19605865-19605965)
chr4 (226-318)||(18420033-18420125)
chr4 (268-338)||(28799866-28799936)
chr4 (267-340)||(10115517-10115590)
chr4 (387-455)||(11775914-11775983)
[»] chr7 (33 HSPs)
chr7 (637-858)||(11774001-11774223)
chr7 (637-845)||(29731043-29731256)
chr7 (384-563)||(11774297-11774476)
chr7 (637-845)||(29741691-29741904)
chr7 (692-858)||(8323971-8324140)
chr7 (636-811)||(16094663-16094837)
chr7 (638-808)||(20148544-20148713)
chr7 (370-564)||(23386474-23386668)
chr7 (385-570)||(20421097-20421283)
chr7 (692-858)||(8327170-8327325)
chr7 (636-736)||(23099816-23099915)
chr7 (756-839)||(3170266-3170349)
chr7 (216-342)||(11775039-11775165)
chr7 (710-845)||(29741141-29741282)
chr7 (636-811)||(16196568-16196742)
chr7 (636-839)||(17161226-17161426)
chr7 (777-858)||(20910493-20910574)
chr7 (208-308)||(16196053-16196153)
chr7 (651-770)||(16175156-16175275)
chr7 (205-338)||(20911563-20911696)
chr7 (782-845)||(13761694-13761757)
chr7 (224-338)||(3171590-3171704)
chr7 (232-321)||(20147595-20147684)
chr7 (502-564)||(16196435-16196497)
chr7 (219-318)||(6461080-6461178)
chr7 (280-338)||(9128350-9128408)
chr7 (267-338)||(16093871-16093942)
chr7 (267-321)||(17162235-17162289)
chr7 (495-564)||(8324245-8324314)
chr7 (495-564)||(8327444-8327513)
chr7 (698-751)||(13765379-13765432)
chr7 (301-338)||(13766479-13766516)
chr7 (267-332)||(15010167-15010232)
[»] chr2 (9 HSPs)
chr2 (636-858)||(21654140-21654355)
chr2 (639-851)||(28774163-28774365)
chr2 (637-856)||(18995168-18995386)
chr2 (216-338)||(17739971-17740093)
chr2 (216-339)||(34897835-34897958)
chr2 (270-333)||(22577012-22577075)
chr2 (219-318)||(23153984-23154082)
chr2 (219-318)||(23565241-23565339)
chr2 (276-338)||(24280756-24280818)
[»] chr1 (15 HSPs)
chr1 (637-858)||(20407782-20408003)
chr1 (690-858)||(21719667-21719835)
chr1 (637-856)||(21423197-21423416)
chr1 (680-858)||(22615139-22615317)
chr1 (637-856)||(18621898-18622116)
chr1 (465-565)||(20407610-20407710)
chr1 (782-856)||(23475833-23475907)
chr1 (744-856)||(21978628-21978740)
chr1 (780-838)||(21402675-21402733)
chr1 (216-308)||(9167291-9167383)
chr1 (449-522)||(22614969-22615043)
chr1 (637-680)||(21719602-21719645)
chr1 (276-338)||(21422155-21422217)
chr1 (292-337)||(22614295-22614340)
chr1 (527-564)||(22615037-22615074)
[»] chr5 (16 HSPs)
chr5 (658-858)||(24194145-24194345)
chr5 (636-858)||(17364097-17364319)
chr5 (637-856)||(19316424-19316642)
chr5 (637-858)||(17169532-17169751)
chr5 (637-858)||(26727652-26727868)
chr5 (637-856)||(19268373-19268595)
chr5 (637-750)||(22468511-22468624)
chr5 (690-838)||(26867849-26867997)
chr5 (382-564)||(26727392-26727579)
chr5 (636-747)||(13456898-13457009)
chr5 (636-777)||(26132609-26132749)
chr5 (370-540)||(17363835-17364003)
chr5 (488-564)||(22468396-22468472)
chr5 (267-338)||(19267319-19267390)
chr5 (365-455)||(19268102-19268192)
chr5 (754-856)||(31479591-31479693)
[»] scaffold0530 (1 HSPs)
scaffold0530 (669-858)||(2939-3125)
[»] scaffold0190 (2 HSPs)
scaffold0190 (637-858)||(1639-1857)
scaffold0190 (383-565)||(1385-1568)
[»] scaffold0007 (5 HSPs)
scaffold0007 (414-570)||(206065-206220)
scaffold0007 (720-858)||(204779-204920)
scaffold0007 (636-717)||(205918-205999)
scaffold0007 (636-717)||(210888-210969)
scaffold0007 (408-493)||(211062-211147)
[»] chr6 (28 HSPs)
chr6 (637-858)||(14566539-14566744)
chr6 (637-856)||(19725361-19725573)
chr6 (637-851)||(19977284-19977503)
chr6 (637-856)||(10974827-10975046)
chr6 (636-790)||(14354227-14354381)
chr6 (636-842)||(23294256-23294462)
chr6 (637-749)||(23299586-23299698)
chr6 (676-856)||(19980203-19980383)
chr6 (636-839)||(12463667-12463870)
chr6 (437-564)||(14354028-14354155)
chr6 (459-566)||(19977574-19977681)
chr6 (636-815)||(12487672-12487848)
chr6 (469-564)||(23294533-23294626)
chr6 (219-321)||(23089888-23089990)
chr6 (221-301)||(17913335-17913415)
chr6 (196-308)||(23298617-23298729)
chr6 (219-306)||(22544814-22544901)
chr6 (267-321)||(12465574-12465628)
chr6 (460-564)||(12487496-12487600)
chr6 (267-321)||(9520707-9520761)
chr6 (267-340)||(12486768-12486841)
chr6 (636-677)||(23349707-23349748)
chr6 (690-770)||(23350242-23350322)
chr6 (276-338)||(19991285-19991347)
chr6 (476-564)||(16896462-16896551)
chr6 (409-564)||(23299354-23299509)
chr6 (301-348)||(19728504-19728551)
chr6 (276-337)||(14486829-14486890)
[»] scaffold0228 (3 HSPs)
scaffold0228 (637-858)||(7038-7259)
scaffold0228 (637-858)||(14620-14841)
scaffold0228 (637-858)||(24572-24793)
[»] scaffold0111 (2 HSPs)
scaffold0111 (641-811)||(30260-30429)
scaffold0111 (216-321)||(31293-31398)
[»] chr8 (10 HSPs)
chr8 (638-811)||(21695023-21695197)
chr8 (637-856)||(18830650-18830864)
chr8 (636-839)||(25263200-25263404)
chr8 (459-564)||(21694845-21694950)
chr8 (756-839)||(24624919-24625002)
chr8 (258-340)||(17508576-17508658)
chr8 (637-721)||(17622412-17622496)
chr8 (756-856)||(18828536-18828636)
chr8 (209-331)||(25262238-25262360)
chr8 (276-338)||(24383502-24383564)
[»] scaffold1114 (3 HSPs)
scaffold1114 (636-850)||(1819-2032)
scaffold1114 (216-332)||(228-343)
scaffold1114 (438-561)||(1623-1746)
[»] scaffold0001 (1 HSPs)
scaffold0001 (637-858)||(154921-155141)
[»] scaffold0417 (2 HSPs)
scaffold0417 (644-838)||(3548-3742)
scaffold0417 (205-308)||(2585-2688)
[»] scaffold0412 (1 HSPs)
scaffold0412 (637-839)||(3151-3344)
[»] scaffold0305 (1 HSPs)
scaffold0305 (637-770)||(2452-2585)
[»] scaffold0004 (1 HSPs)
scaffold0004 (756-858)||(371327-371429)
[»] scaffold0093 (1 HSPs)
scaffold0093 (690-811)||(51804-51924)
[»] scaffold0333 (1 HSPs)
scaffold0333 (215-306)||(1151-1242)
[»] scaffold0193 (1 HSPs)
scaffold0193 (756-858)||(18873-18975)
[»] scaffold0064 (1 HSPs)
scaffold0064 (637-770)||(10066-10204)
[»] scaffold0282 (1 HSPs)
scaffold0282 (216-321)||(20009-20114)
[»] scaffold0184 (2 HSPs)
scaffold0184 (787-858)||(10620-10691)
scaffold0184 (636-735)||(5330-5428)
[»] scaffold0205 (1 HSPs)
scaffold0205 (756-858)||(1065-1167)
[»] scaffold0040 (1 HSPs)
scaffold0040 (270-338)||(48411-48479)
[»] scaffold2087 (1 HSPs)
scaffold2087 (637-722)||(117-202)
[»] scaffold0964 (1 HSPs)
scaffold0964 (777-845)||(2231-2299)
[»] scaffold0039 (1 HSPs)
scaffold0039 (693-736)||(106050-106093)
[»] scaffold0024 (1 HSPs)
scaffold0024 (270-321)||(100639-100690)


Alignment Details
Target: chr3 (Bit Score: 332; Significance: 0; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 195 - 566
Target Start/End: Complemental strand, 2547713 - 2547343
Alignment:
Q  195 ataacactttaaggaaacgttaaagtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatca 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2547713 ataacactttaaggaaacgttaaagtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatca 2547614  T
Q  295 tcattgattcattcacattctatcatactaacatgaattcaaagcctcatactaacatggggttttgtattgggcaactcgccacaacgagttacaccag 394  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2547613 tcattgattcattcacattcta-catactaacatgaattcaaaacctcatactaacatggggttttgtattgggcaactcaccacaacgagttacaccag 2547515  T
Q  395 aataggtcccctattcttggttgttccctctcgagaactctccaattttcaccaaaaatccttgtttttaatcccctttgacccaaattcgttcccaaag 494  Q
    || ||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  2547514 aacaggtcccctgttcttggttgttccctctcgggaactctccaattttcacccaaaatccttgtttttaatcccctttgacccaaattcgttcccaaaa 2547415  T
Q  495 cttgtacattagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataacatcaatttt 566  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2547414 cttgtacattagtttatatacataaaaagataatcaaaacaacaaccaacatggaatcataacatcaatttt 2547343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 636 - 858
Target Start/End: Complemental strand, 2547301 - 2547079
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2547301 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcacaaattc 2547202  T
Q  736 acgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatc 835  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2547201 acgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatc 2547102  T
Q  836 atactcacaaattcacttgaatt 858  Q
    |||||||||||||||||||||||    
T  2547101 atactcacaaattcacttgaatt 2547079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 636 - 858
Target Start/End: Original strand, 15538971 - 15539193
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    ||||||| |||||||||||||| ||||||||||||||||||||| |||| ||| || |||||||||||||||||||||||||| ||||||||| ||||||    
T  15538971 caaacaatcacaccaattcaaaacccatcaacatacaaacataatcaaacatttataaagtgaatttaaacatgtttcaacaataatcactcatcaattc 15539070  T
Q  736 acgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatc 835  Q
    | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||| |||    
T  15539071 atgatttacactcaaataagcaaaaatcatcaaaatcacttaacaacaacaacaactatcaagtttaatcacataactcaacaatttcatgaagttgatc 15539170  T
Q  836 atactcacaaattcacttgaatt 858  Q
    |||  ||||||||||| ||||||    
T  15539171 atatccacaaattcacatgaatt 15539193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 641 - 858
Target Start/End: Original strand, 10725901 - 10726117
Alignment:
Q  641 aaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattcacgat 740  Q
    |||||||| ||||||||||| ||||| |||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  10725901 aaccacacaaattcaaacccaatcaatatacaaacataa-caaacattcatgaagtgaattcaaacatgtttcaacaacaatcactcaccaattcatgat 10725999  T
Q  741 ttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatact 840  Q
    |||||||||| |||  ||||||||||||||  ||||||||||||||||||||||||||||||||| | ||||| |||||||| ||||| ||||||||||     
T  10726000 ttacactcaattaataaaaaatcatcaaaacaacttaacaacaacaacaactatgaagtttaagctcttaacataacaattttatgaaatttatcatacc 10726099  T
Q  841 cacaaattcacttgaatt 858  Q
     ||||||| || ||||||    
T  10726100 tacaaattaacatgaatt 10726117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 637 - 856
Target Start/End: Original strand, 5347320 - 5347539
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    ||||||||||||||||| |||  ||||||||||||||| ||||||||| ||| |||||||||||| |||||||||||||||||||||| |||||||||||    
T  5347320 aaacaaccacaccaatttaaattccatcaacatacaaagataaacaaacattaatgaagtgaattcaaacatgtttcaacaacaatcaatcaccaattca 5347419  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     |||| |||||||| |||  |||||||| |||||  ||| | |  |||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  5347420 tgattcacactcaactaataaaaaatcaacaaaacaactcatcgccaacaacaactatgaagtttaagctcttaacacaacaatttcatgaagtttatca 5347519  T
Q  837 tactcacaaattcacttgaa 856  Q
    ||| ||||| ||||| ||||    
T  5347520 tacccacaatttcacatgaa 5347539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 637 - 858
Target Start/End: Complemental strand, 19632142 - 19631923
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    |||||||||||||||||||||||||||||||||||||||||  | ||| ||| ||||||||||||||| ||||||||||||| ||||||||| |||||||    
T  19632142 aaacaaccacaccaattcaaaccccatcaacatacaaacatgcataaacatttatgaagtgaatttaagcatgtttcaacaataatcactcatcaattca 19632043  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     ||||||||||||| ||| |||||||||||||||  |||||  ||||| ||||||  ||| |||||||||||||||||||  | ||||||||||||||||    
T  19632042 tgatttacactcaattaagcaaaaatcatcaaaacaacttataaacaaaaacaac--tgaggtttaagcacataacacaatcaattcatgaagtttatca 19631945  T
Q  837 tactcacaaattcacttgaatt 858  Q
    |||   ||||||||| ||||||    
T  19631944 taccagcaaattcacatgaatt 19631923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 637 - 838
Target Start/End: Original strand, 13440050 - 13440250
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    ||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||  || || ||||    
T  13440050 aaacaaccacaccaattcaaatctcataaacatacaaacataaacaaacattcatgaagtgaattcaaacatgtttcaacaacaatcaaccaacatttca 13440149  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcac--ataacacaacaatttcatgaagtttat 834  Q
     |||| |||||||| |||  ||||||||||||||  |||   |||||||||||||| |||||||||||| |  |||||||||||||||||||||||||||    
T  13440150 tgattcacactcaattaataaaaaatcatcaaaacaact---caacaacaacaactctgaagtttaagctcttataacacaacaatttcatgaagtttat 13440246  T
Q  835 cata 838  Q
    ||||    
T  13440247 cata 13440250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 638 - 858
Target Start/End: Complemental strand, 16219088 - 16218878
Alignment:
Q  638 aacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattcac 737  Q
    ||||||||||||||||||||||||||||||||||||||||          | | |||||||||| ||||| || |||||||||||| || || |||  |     
T  16219088 aacaaccacaccaattcaaaccccatcaacatacaaacat----------ttaagaagtgaattcaaacacgtctcaacaacaatctcttactaatctat 16218999  T
Q  738 gatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcat 837  Q
    ||||||||||||| ||| |||||||||||||||  ||||| |||||||| | |||||||||||||||| | |||||||||||||||||||||||||||||    
T  16218998 gatttacactcaattaatcaaaaatcatcaaaacaacttatcaacaacagctactatgaagtttaagctcttaacacaacaatttcatgaagtttatcat 16218899  T
Q  838 actcacaaattcacttgaatt 858  Q
    || ||||||||||||||||||    
T  16218898 acccacaaattcacttgaatt 16218878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 644 - 858
Target Start/End: Original strand, 27052373 - 27052587
Alignment:
Q  644 cacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattcacgattt- 742  Q
    ||||| |||||||| |||||||| |||||||  |||||||| ||| |||||||||||| ||| ||||||||||||||| ||||||| |||||| |||||     
T  27052373 cacactaattcaaatcccatcaatatacaaatgtaaacaaacatttatgaagtgaattcaaagatgtttcaacaacaaacactcac-aattcatgatttt 27052471  T
Q  743 acactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatactca 842  Q
    |||||||| ||| ||||| ||| ||||   ||| ||||||||||||||||||||||||||||| | ||||||| ||||||||| ||||||||||||| ||    
T  27052472 acactcaattaatcaaaattcaccaaagcaactcaacaacaacaacaactatgaagtttaagctcttaacacagcaatttcatcaagtttatcataccca 27052571  T
Q  843 caaattcacttgaatt 858  Q
    ||||||||| ||||||    
T  27052572 caaattcacatgaatt 27052587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 636 - 858
Target Start/End: Original strand, 10934404 - 10934626
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    |||||||||| |||||||||||||||||||||||| ||| | ||||||| |||||||||||||||| ||| |  ||| | ||| | |||||||||| |||    
T  10934404 caaacaaccataccaattcaaaccccatcaacataaaaatacaaacaaacattcatgaagtgaattcaaatacattttagcaatattcactcaccagttc 10934503  T
Q  736 acgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatc 835  Q
    | ||||||||||||| ||| |||||||| ||||||  ||  ||||||||||||||||||| ||||||||| | ||||||||| ||||| | |||||||||    
T  10934504 atgatttacactcaattaatcaaaaatcttcaaaacaacacaacaacaacaacaactatggagtttaagctcttaacacaacgatttcgttaagtttatc 10934603  T
Q  836 atactcacaaattcacttgaatt 858  Q
    ||   || |||||||| ||||||    
T  10934604 atttccataaattcacatgaatt 10934626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 636 - 858
Target Start/End: Original strand, 19614337 - 19614561
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    ||||||| |||| |||||||||||||||||||||||||||||  | ||| ||| ||||||||||||||||||||||||||||| ||||||| ||||||||    
T  19614337 caaacaatcacatcaattcaaaccccatcaacatacaaacatgtataaacatttatgaagtgaatttaaacatgtttcaacaataatcacttaccaattc 19614436  T
Q  736 acgatttacactcaaataa--acaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagttta 833  Q
    |     |||||| |  |||  | ||||||| ||| ||  ||||| ||||||||||||| ||||| ||||| ||||||||| | |||||||||||||||||    
T  19614437 attgaatacacttagttaagtaaaaaaatcttcagaacaacttatcaacaacaacaacaatgaaatttaatcacataacatatcaatttcatgaagttta 19614536  T
Q  834 tcatactcacaaattcacttgaatt 858  Q
    |||||  ||||||||||| ||||||    
T  19614537 tcatatccacaaattcacatgaatt 19614561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 636 - 770
Target Start/End: Complemental strand, 40354520 - 40354386
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||| |||||||||||||||||||| |||||  ||||||||| ||||||    
T  40354520 caaacaaccacaccaattcaaaccccatcaacatataaacataaataaacattcaagaagtgaatttaaacatgttccaacataaatcactcatcaattc 40354421  T
Q  736 acgatttacactcaaataaacaaaaatcatcaaaa 770  Q
    | | |||||||| |||||| |||||||||||||||    
T  40354420 atggtttacacttaaataagcaaaaatcatcaaaa 40354386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 637 - 858
Target Start/End: Complemental strand, 19660035 - 19659825
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    ||||| ||||||||||||||||||||||||||||||||||   | | | ||| ||||||||||||||| ||||||||||||| ||||||||| |||||||    
T  19660035 aaacatccacaccaattcaaaccccatcaacatacaaacaggtatagacatttatgaagtgaatttaagcatgtttcaacaataatcactcatcaattca 19659936  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     ||||||||||||| ||| |||||||||||||           ||||||||||||||||| || ||||||||||| ||||  | |||  |||||||||||    
T  19659935 tgatttacactcaattaagcaaaaatcatcaa-----------aacaacaacaactatgaggtctaagcacataagacaatcaattctagaagtttatca 19659847  T
Q  837 tactcacaaattcacttgaatt 858  Q
    ||| | ||||||||| ||||||    
T  19659846 tacccgcaaattcacatgaatt 19659825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 756 - 856
Target Start/End: Complemental strand, 12696708 - 12696608
Alignment:
Q  756 caaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatactcacaaattcacttga 855  Q
    |||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||    
T  12696708 caaaaatcatcaaagtaacttatcaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatacccacaatttcacatga 12696609  T
Q  856 a 856  Q
    |    
T  12696608 a 12696608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 637 - 856
Target Start/End: Complemental strand, 12252988 - 12252769
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    |||||||||||||||||||||| ||||||||| |   ||||||||||  |||  |||| |||||| |||||| |||||||||||||||  ||||||||||    
T  12252988 aaacaaccacaccaattcaaacaccatcaacacattgacataaacaatcattagtgaaatgaattcaaacatatttcaacaacaatcatacaccaattca 12252889  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     || || ||||||||||   || ||||||  |||  ||| || ||||||||||||||||||||||||||   |||||||| |  || |||||||||||||    
T  12252888 tgaatttcactcaaatagtaaataatcatgtaaacaactcaataacaacaacaactatgaagtttaagctactaacacaagatattgatgaagtttatca 12252789  T
Q  837 tactcacaaattcacttgaa 856  Q
    ||| || || ||||| ||||    
T  12252788 tacacagaatttcacatgaa 12252769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 460 - 564
Target Start/End: Complemental strand, 19660212 - 19660108
Alignment:
Q  460 ttttaatcccctttgacccaaattcgttcccaaagcttgtacattagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataacat 559  Q
    |||| ||||||||||| ||||||||||  ||||| ||||| |||||||||||||||||||||||  ||||||||||||||| || |||||||||||||||    
T  19660212 ttttgatcccctttgatccaaattcgtctccaaaacttgttcattagtttatatacatcaaaaggcaatcaaaacaacaacaaatatggaatcataacat 19660113  T
Q  560 caatt 564  Q
    |||||    
T  19660112 caatt 19660108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 459 - 570
Target Start/End: Complemental strand, 16219266 - 16219156
Alignment:
Q  459 tttttaatcccctttgacccaaattcgttcccaaagcttgtacattagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataaca 558  Q
    ||||| |||||||| ||| ||||||||| ||| || |||| |||||||||||||||||||||||||  |||||||||||||| |||||| ||| ||||||    
T  16219266 ttttttatcccctt-gactcaaattcgtcccctaaacttgaacattagtttatatacatcaaaagactatcaaaacaacaacaaacatgaaatgataaca 16219168  T
Q  559 tcaattttcacc 570  Q
    ||||||||||||    
T  16219167 tcaattttcacc 16219156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 372 - 564
Target Start/End: Original strand, 27051345 - 27051535
Alignment:
Q  372 ctcgccacaacgagttacaccagaataggtc-ccctattcttggttgttccctctcgagaactctccaattttcaccaaaaatccttgtttttaatcccc 470  Q
    ||||||| |||||||| || |||| |||||| ||||||| ||||||||||||||||| |||||  | |||||||||| |||||||| |||||| ||||||    
T  27051345 ctcgccaaaacgagttccaacagattaggtcgccctatt-ttggttgttccctctcgggaacttccaaattttcacccaaaatcctcgtttttgatcccc 27051443  T
Q  471 tttgacccaaattcgttcccaaagcttgtacattagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataacatcaatt 564  Q
      |||||| ||||||     ||| |||||  | ||||||||| ||||||||||  | ||||||||||||| ||||| |||||||||||||||||    
T  27051444 --tgaccccaattcgactaaaaaacttgtgtactagtttataaacatcaaaaggcattcaaaacaacaacaaacatcgaatcataacatcaatt 27051535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 637 - 791
Target Start/End: Complemental strand, 30098883 - 30098729
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    ||||||||||||||||| |||  ||||||||||| |||||| |||||  ||| ||| |||||||| ||||||||||||||||||||||   |||||  ||    
T  30098883 aaacaaccacaccaattaaaaatccatcaacatagaaacatcaacaatcattaatggagtgaattcaaacatgtttcaacaacaatcatataccaaacca 30098784  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaac 791  Q
     || || ||||||||||  |||||||||| ||||  | | |||||||||||||||    
T  30098783 tgaatttcactcaaatagtcaaaaatcattaaaacaagtcaacaacaacaacaac 30098729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 756 - 839
Target Start/End: Complemental strand, 15045308 - 15045225
Alignment:
Q  756 caaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatac 839  Q
    |||||||||||||||  | ||| ||||||||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||    
T  15045308 caaaaatcatcaaaacaagttatcaacaacaacaaccatgagttttaagcacataacacatcaatttcatgaagtttatcatac 15045225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 16220006 - 16219934
Alignment:
Q  270 attcatcatattaaacactcaatcatcattgattcattcacattctatcatactaacatgaattcaaagcctc 342  Q
    ||||||||||||| ||| |||||||||||| |||||| |||||| |||||||||||||||| |||||||||||    
T  16220006 attcatcatattatacaatcaatcatcatttattcatccacattatatcatactaacatgatttcaaagcctc 16219934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 460 - 564
Target Start/End: Complemental strand, 19632315 - 19632215
Alignment:
Q  460 ttttaatcccctttgacccaaattcgttcccaaagcttgtacattagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataacat 559  Q
    |||| |||||||||||||||||||||| || ||| ||||| |||||||||||| ||||||||||  ||| |||||||||   ||| ||||||||||||||    
T  19632315 ttttgatcccctttgacccaaattcgtccctaaaacttgttcattagtttata-acatcaaaaggcaattaaaacaaca---aacgtggaatcataacat 19632220  T
Q  560 caatt 564  Q
    |||||    
T  19632219 caatt 19632215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 15538838 - 15538898
Alignment:
Q  504 tagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataacatcaatt 564  Q
    ||||||||||||||||||||  ||||||||||||||| |||||| ||||||||||||||||    
T  15538838 tagtttatatacatcaaaaggcaatcaaaacaacaacaaacatgaaatcataacatcaatt 15538898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 219 - 308
Target Start/End: Complemental strand, 9637333 - 9637244
Alignment:
Q  219 gtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcattc 308  Q
    |||||| ||||||||||| ||||||| ||||  ||| | ||||| || ||||||||||||||| ||||  ||||||||||||||||||||    
T  9637333 gtttcaaaatcacattttgcataaaaaacggacaactaaccacatcatgacattcatcatatttaacatccaatcatcattgattcattc 9637244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 219 - 308
Target Start/End: Original strand, 17385786 - 17385875
Alignment:
Q  219 gtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcattc 308  Q
    |||||||||||| ||||| ||||||||||||  ||| | ||||| || |||| |||||||||||||||| |||  |||||||||||||||    
T  17385786 gtttcacaatcatattttgcataaaagacggaaaactaaccacatcatgacaatcatcatattaaacacccaactatcattgattcattc 17385875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 752 - 856
Target Start/End: Original strand, 4813913 - 4814016
Alignment:
Q  752 taaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatactcacaaattcac 851  Q
    ||||||||| | |||| ||  ||||||||||||||| | | ||||  ||||||||| |||| |||||||||||||||||||||||||  ||||| |||||    
T  4813913 taaacaaaagttatcacaacaacttaacaacaacaaaatc-atgagttttaagcacgtaacccaacaatttcatgaagtttatcatatccacaatttcac 4814011  T
Q  852 ttgaa 856  Q
     ||||    
T  4814012 atgaa 4814016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 267 - 338
Target Start/End: Complemental strand, 15046331 - 15046261
Alignment:
Q  267 gacattcatcatattaaacactcaatcatcattgattcattcacattctatcatactaacatgaattcaaag 338  Q
    |||||||||||||||||| || ||||||||||  ||||  |||| ||| |||||||||||||||||||||||    
T  15046331 gacattcatcatattaaa-acccaatcatcatcaattctatcaccttcaatcatactaacatgaattcaaag 15046261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 276 - 338
Target Start/End: Complemental strand, 11833568 - 11833506
Alignment:
Q  276 catattaaacactcaatcatcattgattcattcacattctatcatactaacatgaattcaaag 338  Q
    ||||||| |||| ||||||||||  |||||||| ||||||||||||  |||||||||||||||    
T  11833568 catattagacacccaatcatcatcaattcattctcattctatcatataaacatgaattcaaag 11833506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 276 - 338
Target Start/End: Complemental strand, 46472831 - 46472769
Alignment:
Q  276 catattaaacactcaatcatcattgattcattcacattctatcatactaacatgaattcaaag 338  Q
    |||||||||| ||| ||||||||  ||||| || ||||||||||||| |||||||||||||||    
T  46472831 catattaaacgctcgatcatcatcaattcaatctcattctatcatacaaacatgaattcaaag 46472769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 476 - 557
Target Start/End: Original strand, 10934245 - 10934326
Alignment:
Q  476 cccaaattcgttcccaaagcttgtacattagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataac 557  Q
    ||||||||||   ||||| |||||||| ||||||||| |||| |||||  | | ||||||||||||||||| ||||||||||    
T  10934245 cccaaattcgactccaaaacttgtacactagtttataaacattaaaaggcatttaaaacaacaaccaacattgaatcataac 10934326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 25486654 - 25486601
Alignment:
Q  196 taacactttaaggaaacgttaaagtttcacaatcacattttacataaaagacgg 249  Q
    |||||| | ||||||||  |||||||| ||||||||||||||||||||||||||    
T  25486654 taacacctcaaggaaacaataaagttttacaatcacattttacataaaagacgg 25486601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 301 - 347
Target Start/End: Original strand, 5346363 - 5346409
Alignment:
Q  301 attcattcacattctatcatactaacatgaattcaaagcctcatact 347  Q
    |||||||||||||  ||||||||||||||||||||||| ||| ||||    
T  5346363 attcattcacattaaatcatactaacatgaattcaaagtctcctact 5346409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 258 - 348
Target Start/End: Original strand, 8023289 - 8023379
Alignment:
Q  258 ccacaccaagacattcatcatattaaacactcaatcatcattgattcattcacattctatcatactaacatgaattcaaagcctcatacta 348  Q
    ||||| || ||||| |||||  |||||||||||||| | |   |||| ||||||||  ||||||||||||||||||||||| ||| |||||    
T  8023289 ccacatcacgacatccatcaatttaaacactcaatccttaacaattcgttcacattaaatcatactaacatgaattcaaagtctcctacta 8023379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 19633052 - 19633006
Alignment:
Q  258 ccacaccaagacattcatcatattaaacactcaatcatcattgattc 304  Q
    ||||| ||||| ||||| ||||||||||||||| |||||||||||||    
T  19633052 ccacatcaagatattcaccatattaaacactcattcatcattgattc 19633006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 10933497 - 10933554
Alignment:
Q  276 catattaaacactcaatcatcattgattcattcacattctatcatactaacatgaatt 333  Q
    ||||||| |||  ||||||||||  ||||||||||||| ||||||| |||||||||||    
T  10933497 catattagacatccaatcatcatcaattcattcacattttatcatattaacatgaatt 10933554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 561
Target Start/End: Complemental strand, 14305710 - 14305661
Alignment:
Q  512 atacatcaaaagataatcaaaacaacaaccaacatggaatcataacatca 561  Q
    ||||||||||||| |||||||||||  || ||||| ||||||||||||||    
T  14305710 atacatcaaaagacaatcaaaacaattacaaacatcgaatcataacatca 14305661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 267 - 308
Target Start/End: Complemental strand, 38278039 - 38277998
Alignment:
Q  267 gacattcatcatattaaacactcaatcatcattgattcattc 308  Q
    |||||||||| |||||| || |||||||||||||||||||||    
T  38278039 gacattcatcgtattaagcattcaatcatcattgattcattc 38277998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 3e-81; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 637 - 858
Target Start/End: Original strand, 15711344 - 15711565
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15711344 aaacaaccacacaaattcaaaccccatcaacacacaaacataaacaaacattcatgaagtgaattcaaacatgtttcaacaacaatcactcaccaattca 15711443  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     |||| |||||||| ||| |||||||| ||||||  ||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||    
T  15711444 tgattcacactcaattaatcaaaaatcttcaaaacaacttaacaacaacaacaactatgaagtttaatctcttaacacaacaatttcatgaagtttatca 15711543  T
Q  837 tactcacaaattcacttgaatt 858  Q
    ||| |||||||| || ||||||    
T  15711544 tacccacaaatttacatgaatt 15711565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 636 - 858
Target Start/End: Original strand, 11776149 - 11776370
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||  ||||||||||||||||||||||||||    
T  11776149 caaacaaccacatcaattcaaaccc-atcaacatacaaacataaacaaacattcatgaagtgattttaaacacatttcaacaacaatcactcaccaattc 11776247  T
Q  736 acgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatc 835  Q
    | |||| |||||||| ||| |||||||||| ||||  ||||| |||||||||||| |||||||||||||| |  || |||||||||||||||||||||||    
T  11776248 atgattcacactcaattaatcaaaaatcattaaaacaacttatcaacaacaacaattatgaagtttaagctctgaagacaacaatttcatgaagtttatc 11776347  T
Q  836 atactcacaaattcacttgaatt 858  Q
    | || ||||||||||||||||||    
T  11776348 acacccacaaattcacttgaatt 11776370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 637 - 856
Target Start/End: Original strand, 21981882 - 21982099
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    |||||||||||||||| |||| |||||||||| || |||||||||||| ||| |||||||||||| ||||||||||||||||||||| | || |||||||    
T  21981882 aaacaaccacaccaatccaaatcccatcaacacacgaacataaacaaacattaatgaagtgaattcaaacatgtttcaacaacaatcccacatcaattca 21981981  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacat-aacacaacaatttcatgaagtttatc 835  Q
     |||||| || ||||||| ||||| |||||||||  |||   ||||||||||||||||||||||||||| | | |||||||||||||||| |||||||||    
T  21981982 tgatttatacgcaaataatcaaaattcatcaaaacaact---caacaacaacaactatgaagtttaagctcttaaacacaacaatttcattaagtttatc 21982078  T
Q  836 atactcacaaattcacttgaa 856  Q
    |||| ||||| ||||| ||||    
T  21982079 atacccacaatttcacatgaa 21982099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 636 - 855
Target Start/End: Original strand, 17959794 - 17960010
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||| ||  |||  |||||||||||||||||||||||||||| ||||||||| ||||||    
T  17959794 caaacaaccacacaaattcaaaccccatcaagatacaaacataaataagcatttgtgaagtgaatttaaacatgtttcaacaataatcactcatcaattc 17959893  T
Q  736 acgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatc 835  Q
    | || |||||||||||||| ||||||||| |||||  ||||| ||||   ||||||| |||  ||||||||||||||| ||||| ||||||||||||||     
T  17959894 atgacttacactcaaataagcaaaaatcaccaaaacaacttatcaac---aacaactttgagttttaagcacataacataacaaattcatgaagtttatt 17959990  T
Q  836 atactcacaaattcacttga 855  Q
    ||||  | ||||||||||||    
T  17959991 ataccaataaattcacttga 17960010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 636 - 858
Target Start/End: Original strand, 16571127 - 16571336
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaaca-atcactcaccaatt 734  Q
    |||||||| |||||||||||||||| ||||||||| ||||||||||||| | |||||||||||||| |||||| | |||||||||  |||||||||||||    
T  16571127 caaacaacaacaccaattcaaaccctatcaacatagaaacataaacaaacactcatgaagtgaattcaaacatatctcaacaacatgtcactcaccaatt 16571226  T
Q  735 cacgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttat 834  Q
    || ||||||||||||| |||  ||||||||||||              ||||||||||||||||||||||| | |||||||||||||| |||||||||||    
T  16571227 catgatttacactcaattaataaaaaatcatcaa--------------aacaacaactatgaagtttaagctcttaacacaacaattttatgaagtttat 16571312  T
Q  835 catactcacaaattcacttgaatt 858  Q
    ||||| ||||||||||||||||||    
T  16571313 catacccacaaattcacttgaatt 16571336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 637 - 791
Target Start/End: Complemental strand, 12334851 - 12334697
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    ||||||||||||||||||||| |||||||||| | |||||| || ||| ||| |||||||||||| | ||||||||||||| ||||||  ||||||||||    
T  12334851 aaacaaccacaccaattcaaaacccatcaacacataaacatgaataaacattaatgaagtgaattcagacatgtttcaacaccaatcatacaccaattca 12334752  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaac 791  Q
     || || ||||||||||   ||||||||| ||||  ||| |||||||||||||||    
T  12334751 tgaatttcactcaaatagtgaaaaatcatgaaaacaactcaacaacaacaacaac 12334697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 637 - 753
Target Start/End: Original strand, 9566500 - 9566616
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    |||||||||||||||| |||| |||||||||| | || |||||||||  ||| |||||||||||| ||||||||||||||||||||||  ||||||||||    
T  9566500 aaacaaccacaccaatccaaatcccatcaacacataagcataaacaatcattaatgaagtgaattcaaacatgtttcaacaacaatcatacaccaattca 9566599  T
Q  737 cgatttacactcaaata 753  Q
     || |||||||||||||    
T  9566600 tgaattacactcaaata 9566616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 460 - 561
Target Start/End: Original strand, 17959627 - 17959728
Alignment:
Q  460 ttttaatcccctttgacccaaattcgttcccaaagcttgtacattagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataacat 559  Q
    |||| |||||||||||||| |||| |||||| || |||||  |||| || ||||||||||||||| ||||||||||||| | ||||||||||||||||||    
T  17959627 ttttgatcccctttgaccccaatttgttccccaaacttgtttattatttaatatacatcaaaagacaatcaaaacaacatcaaacatggaatcataacat 17959726  T
Q  560 ca 561  Q
    ||    
T  17959727 ca 17959728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 270 - 346
Target Start/End: Original strand, 11775304 - 11775380
Alignment:
Q  270 attcatcatattaaacactcaatcatcattgattcattcacattctatcatactaacatgaattcaaagcctcatac 346  Q
    |||||||||||||||||| ||||| ||||  ||||||||||||||||||||| ||||||||||||||| | ||||||    
T  11775304 attcatcatattaaacacccaatcctcatctattcattcacattctatcatattaacatgaattcaaaacttcatac 11775380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 16570477 - 16570557
Alignment:
Q  258 ccacaccaagacattcatcatattaaacactcaatcatcattgattcattcacattctatcatactaacatgaattcaaag 338  Q
    ||||| || ||||||||||||||| ||||| || |||| ||  ||||||||||||||||||||||||||||||||||||||    
T  16570477 ccacatcatgacattcatcatattgaacacccagtcattatcaattcattcacattctatcatactaacatgaattcaaag 16570557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 216 - 331
Target Start/End: Complemental strand, 12451849 - 12451735
Alignment:
Q  216 aaagtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcattcacattct 315  Q
    ||||||||| ||| |||||| |||||||||||||  ||| | ||||| || ||||||||||||||||||||  |||||| |||||||||||||  |||||    
T  12451849 aaagtttca-aattacatttcacataaaagacggacaactatccacatcacgacattcatcatattaaacatccaatcaacattgattcattcttattct 12451751  T
Q  316 atcatactaacatgaa 331  Q
    |||||| || ||||||    
T  12451750 atcatattatcatgaa 12451735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 637 - 836
Target Start/End: Complemental strand, 12344284 - 12344096
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    ||||||||||||||| ||||| ||||||||||      ||||||||    || |||||||||||| |||| |||||||||  ||||||   |||||||||    
T  12344284 aaacaaccacaccaactcaaaacccatcaaca------cataaaca----ttaatgaagtgaattcaaacgtgtttcaacgccaatcatagaccaattca 12344195  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     || || |||| |||||  |||||||||| ||||  ||| ||||||||||| ||| |||||||| |||   ||||||| || | ||||||||||||||||    
T  12344194 tgaatttcactgaaatagtcaaaaatcatgaaaacaactcaacaacaacaataac-atgaagttaaagataataacaccaccaattcatgaagtttatca 12344096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 488 - 564
Target Start/End: Original strand, 11776002 - 11776078
Alignment:
Q  488 cccaaagcttgtacattagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataacatcaatt 564  Q
    |||||| |||||||| ||| ||||| ||||||||||  | | ||||||||||| ||||| |||||||||||||||||    
T  11776002 cccaaaacttgtacactagcttataaacatcaaaaggcatttaaaacaacaacaaacatcgaatcataacatcaatt 11776078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 636 - 736
Target Start/End: Complemental strand, 19605965 - 19605865
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    ||||| || ||| ||||||||||||||  |||||||||||||| | ||  ||  || ||||||||||| |||||||| ||||| ||||||||| ||||||    
T  19605965 caaactacaacaacaattcaaaccccaataacatacaaacatatataatcatatataaagtgaatttacacatgtttgaacaataatcactcatcaattc 19605866  T
Q  736 a 736  Q
    |    
T  19605865 a 19605865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 318
Target Start/End: Complemental strand, 18420125 - 18420033
Alignment:
Q  226 aatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcattcacattctatc 318  Q
    |||||| |||| ||||||||||||  ||  | ||||| ||  ||||| |||| ||||||||| ||||||||||||||||||||  ||||||||    
T  18420125 aatcacgttttgcataaaagacggacaattaaccacatcataacatttatcaaattaaacacccaatcatcattgattcattcttattctatc 18420033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 268 - 338
Target Start/End: Original strand, 28799866 - 28799936
Alignment:
Q  268 acattcatcatattaaacactcaatcatcattgattcattcacattctatcatactaacatgaattcaaag 338  Q
    |||||||||  ||||||||  ||| ||| || || ||||||||||||||||||| ||||||| ||||||||    
T  28799866 acattcatccaattaaacatccaaacattatagactcattcacattctatcatattaacatggattcaaag 28799936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 267 - 340
Target Start/End: Complemental strand, 10115590 - 10115517
Alignment:
Q  267 gacattcatcatattaaacactcaatcatcattgattcattcacattctatcatactaacatgaattcaaagcc 340  Q
    ||||||||| ||||||||||| ||| ||||| ||||||||||  |||||||| || || | ||||| |||||||    
T  10115590 gacattcataatattaaacacccaaccatcaatgattcattcttattctatcctattatcgtgaatacaaagcc 10115517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 387 - 455
Target Start/End: Original strand, 11775914 - 11775983
Alignment:
Q  387 tacaccagaataggtccccta-ttcttggttgttccctctcgagaactctccaattttcaccaaaaatcc 455  Q
    ||||||| || ||||| |||| |||||||||||||||||||| |||||| | | |||||||| |||||||    
T  11775914 tacaccaaaacaggtcacctagttcttggttgttccctctcgggaactcccaatttttcacccaaaatcc 11775983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 151; Significance: 2e-79; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 637 - 858
Target Start/End: Complemental strand, 11774223 - 11774001
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||    
T  11774223 aaacaaccacaccaattcaaaccacatcaacatacaaacataaacaaatattcatgaagtgagttcaaacatatttcaacaacaatcactcaccaattca 11774124  T
Q  737 cgatttacactcaaataa-acaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatc 835  Q
     ||||| |||||||  || |  |||||||||||||  ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11774123 tgattttcactcaatcaataagaaaatcatcaaaacaacttatcaacaacaacaactatgaagtttaagcgcataacacaacaatttcatgaagtttatc 11774024  T
Q  836 atactcacaaattcacttgaatt 858  Q
    |||  ||||||||||||||||||    
T  11774023 atatccacaaattcacttgaatt 11774001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 637 - 845
Target Start/End: Original strand, 29731043 - 29731256
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaat--- 733  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| ||| | |||||||||| ||||||||||||||||||||||| |||||||       
T  29731043 aaacaaccacaccaattcaaacccaa-caacatacaaacataaacaaacatttaagaagtgaattcaaacatgtttcaacaacaatcacacaccaattca 29731141  T
Q  734 tcacgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaac---tatgaagtttaagcacataacacaacaatttcatgaagt 830  Q
    ||| ||||||||||||||||| ||||| |||||||||  ||| |||||||||||||||   |||||||||||||| | |||||  |||||||||||||||    
T  29731142 tcatgatttacactcaaataatcaaaattcatcaaaacaactcaacaacaacaacaacaattatgaagtttaagctcttaacatgacaatttcatgaagt 29731241  T
Q  831 ttatcatactcacaa 845  Q
    |||||||||||||||    
T  29731242 ttatcatactcacaa 29731256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 384 - 563
Target Start/End: Complemental strand, 11774476 - 11774297
Alignment:
Q  384 agttacaccagaataggtcccctattcttggttgttccctctcgagaactctccaattttcaccaaaaatccttgtttttaatcccctttgacccaaatt 483  Q
    |||||||||| || ||| | ||| |||||||||||||||||||| ||||||||||||||||||| |||||||| |||| | |||||||||||||||| ||    
T  11774476 agttacaccataacagggctcctgttcttggttgttccctctcgggaactctccaattttcacccaaaatcctcgtttatgatcccctttgacccaagtt 11774377  T
Q  484 cgttcccaaagcttgtacattagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataacatcaat 563  Q
    |||| ||||| |||||||||||||||||||||||||||||| |||||||||||| || |||||| |||||||||||||||    
T  11774376 cgtttccaaaacttgtacattagtttatatacatcaaaagacaatcaaaacaacgacaaacatgaaatcataacatcaat 11774297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 637 - 845
Target Start/End: Complemental strand, 29741904 - 29741691
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaat--- 733  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| ||| | |||||||||| ||||||||||||||||||||||| |||||||       
T  29741904 aaacaaccacaccaattcaaacccaa-caacatacaaacataaacaaacatttaagaagtgaattcaaacatgtttcaacaacaatcacacaccaattca 29741806  T
Q  734 tcacgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaac---aactatgaagtttaagcacataacacaacaatttcatgaagt 830  Q
    ||| ||||||||||||||||| ||||| |||||||||  ||| ||||||||||||   || |||||||||||||| | ||| |  |||||||||||||||    
T  29741805 tcatgatttacactcaaataatcaaaattcatcaaaacaactcaacaacaacaacaataattatgaagtttaagctcttaagatgacaatttcatgaagt 29741706  T
Q  831 ttatcatactcacaa 845  Q
    |||||||||||||||    
T  29741705 ttatcatactcacaa 29741691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 692 - 858
Target Start/End: Complemental strand, 8324140 - 8323971
Alignment:
Q  692 gaagtgaatttaaacatgtttcaacaacaatcactcaccaattcacgatttacactcaaataaacaaaaatcatcaaaatcactta---acaacaacaac 788  Q
    |||||||||| ||||||||||||||||||||||||||   ||||  ||||||||||| | |||   |||||||||||||  |||||   |||||||||||    
T  8324140 gaagtgaattcaaacatgtttcaacaacaatcactcattgattcgtgatttacactctattaatacaaaatcatcaaaacaacttattaacaacaacaac 8324041  T
Q  789 aactatgaagtttaagcacataacacaacaatttcatgaagtttatcatactcacaaattcacttgaatt 858  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| ||||||    
T  8324040 aactatgaagtttaagcacataacacaacaatttcctgaagtttatcttacccacaaattcacatgaatt 8323971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 636 - 811
Target Start/End: Original strand, 16094663 - 16094837
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    |||||||| |||||||||||||||||| ||||||||||||||  | ||  ||| ||||||||||||| |||||||||||| |  ||||||||| ||||||    
T  16094663 caaacaactacaccaattcaaaccccaccaacatacaaacatgtataaccatttatgaagtgaatttgaacatgtttcaatagtaatcactcatcaattc 16094762  T
Q  736 acgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataa 811  Q
    | | |||||||| || ||| | |||||||||||||  ||||| || |||||||||||||||| |||||||||||||    
T  16094763 atggtttacacttaattaagcgaaaatcatcaaaacaacttatcaccaacaacaactatgaa-tttaagcacataa 16094837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 638 - 808
Target Start/End: Original strand, 20148544 - 20148713
Alignment:
Q  638 aacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattcac 737  Q
    |||||||||||||||||||| |||| || |||||||||||| | |   ||| |||||||||||||||||||||| |||||| ||||||||  |||||||     
T  20148544 aacaaccacaccaattcaaatcccaacagcatacaaacatatatactcatttatgaagtgaatttaaacatgttccaacaataatcactcgtcaattcat 20148643  T
Q  738 gatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcaca 808  Q
    | |||||||| || ||| ||||||||| ||||   ||||| || |||||||||||||||| ||||||||||    
T  20148644 ggtttacacttaattaagcaaaaatcaccaaagcaacttatcaccaacaacaactatgaa-tttaagcaca 20148713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 370 - 564
Target Start/End: Original strand, 23386474 - 23386668
Alignment:
Q  370 aactcgccacaacgagttacaccagaataggtccc-ctattcttggttgttccctctcgagaactctccaa-ttttcaccaaaaatccttgtttttaatc 467  Q
    |||||||||||| ||||||||||| || ||||| | || || ||||||||||||||||| ||||| ||||| |||||||| |||||||   ||||| |||    
T  23386474 aactcgccacaatgagttacaccataacaggtcacactgtt-ttggttgttccctctcgggaact-tccaatttttcacctaaaatccccatttttgatc 23386571  T
Q  468 ccctttgacccaaattcgttcccaaagcttgtacattagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataacatcaatt 564  Q
    |||||   ||||||| ||  |||||| |||||||||||||||||| ||||||||||| | |||||| |||||| ||||| ||||||||||| |||||    
T  23386572 cccttgatcccaaatccgaccccaaaacttgtacattagtttataaacatcaaaagacattcaaaataacaacaaacatagaatcataacaccaatt 23386668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 385 - 570
Target Start/End: Complemental strand, 20421283 - 20421097
Alignment:
Q  385 gttacaccagaataggtcccctattcttggttgttccctctcgagaactctccaattttcaccaaaaatccttgtttttaatc-ccctttgacccaaatt 483  Q
    ||||||||| || |||  |||| ||||| |||||||||||||| ||||||||||||||| |   ||||||| ||||||| ||| |||||||| |||||||    
T  20421283 gttacaccataacaggaaccctgttcttcgttgttccctctcgggaactctccaattttaattcaaaatccctgtttttgatctccctttgatccaaatt 20421184  T
Q  484 cgttcccaaagcttgtacattagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataacatcaattttcacc 570  Q
      ||||| || |||||  | ||||||||||||||||||||  ||||||| ||||||| || ||||||| | ||||||| ||||||||    
T  20421183 tattccccaaacttgtgtactagtttatatacatcaaaaggaaatcaaagcaacaacaaatatggaatgacaacatcatttttcacc 20421097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 692 - 858
Target Start/End: Complemental strand, 8327325 - 8327170
Alignment:
Q  692 gaagtgaatttaaacatgtttcaacaacaatcactcaccaattcacgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaac 791  Q
    |||||||||| |||||||||||||||| ||||||||| | ||||  ||||||||||| | |||  ||||||||||||||           ||||||||||    
T  8327325 gaagtgaattcaaacatgtttcaacaataatcactcatcgattcgtgatttacactctattaataaaaaatcatcaaaa-----------caacaacaac 8327237  T
Q  792 tatgaagtttaagcacataacacaacaatttcatgaagtttatcatactcacaaattcacttgaatt 858  Q
    ||||||||||||| |||||||| ||||||||| ||||||||| | ||| ||||||||||| ||||||    
T  8327236 tatgaagtttaagaacataacataacaatttcctgaagtttaccgtacccacaaattcacatgaatt 8327170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 636 - 736
Target Start/End: Original strand, 23099816 - 23099915
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    ||||||||||||||||||||||||||||||||||| ||||||  | ||| ||| ||||||||||||| ||||||||||||||| ||||||| | ||||||    
T  23099816 caaacaaccacaccaattcaaaccccatcaacatataaacatgta-aaacatttatgaagtgaatttgaacatgtttcaacaataatcacttatcaattc 23099914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 756 - 839
Target Start/End: Complemental strand, 3170349 - 3170266
Alignment:
Q  756 caaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatac 839  Q
    |||||||| ||||||  ||||| ||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||    
T  3170349 caaaaatcctcaaaacaacttatcaacaacaacaactatgagttttaagcacataacacatcaatttcatgaagtttatcatac 3170266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 216 - 342
Target Start/End: Complemental strand, 11775165 - 11775039
Alignment:
Q  216 aaagtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcattcacattct 315  Q
    ||||||||| |||||||| || ||||||| ||||  ||  | ||||| || ||||||||||| ||||||||  |||  |||||| |||||||| ||||||    
T  11775165 aaagtttcaaaatcacatctttcataaaatacggacaattaaccacatcacgacattcatcaaattaaacaaccaaatatcattaattcattctcattct 11775066  T
Q  316 atcatactaacatgaattcaaagcctc 342  Q
    |||||||||||||||||||||||||||    
T  11775065 atcatactaacatgaattcaaagcctc 11775039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 710 - 845
Target Start/End: Complemental strand, 29741282 - 29741141
Alignment:
Q  710 tttcaacaacaatcactcaccaattcacgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaac------aacaactatgaagtttaa 803  Q
    |||||||||||||||| |||||||||| ||||||||||||||||| ||||| |||||||||  | | |||||||||      ||||| ||||||||||||    
T  29741282 tttcaacaacaatcacacaccaattcatgatttacactcaaataatcaaaattcatcaaaacaattcaacaacaacaacagcaacaattatgaagtttaa 29741183  T
Q  804 gcacataacacaacaatttcatgaagtttatcatactcacaa 845  Q
    || | |||||  ||||||||||| ||| ||||| ||||||||    
T  29741182 gctcttaacatgacaatttcatgcagtgtatcacactcacaa 29741141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 636 - 811
Target Start/End: Original strand, 16196568 - 16196742
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    |||||||||||||  |||||||||||| ||||||| |||| || | ||  ||| |||||||||||||||| ||||| | |||| ||| ||||| ||||||    
T  16196568 caaacaaccacactgattcaaaccccaacaacatataaacttatataatcatttatgaagtgaatttaaatatgttcctacaataattactcatcaattc 16196667  T
Q  736 acgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataa 811  Q
    | | ||||||||  | ||| |||||||||||||||  ||||| || |||||| ||||| | | |||||||||||||    
T  16196668 atggtttacacttgattaagcaaaaatcatcaaaacaacttatcaccaacaataactacgga-tttaagcacataa 16196742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 636 - 839
Target Start/End: Complemental strand, 17161426 - 17161226
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    |||||||| || ||||||||||||||||||||||| ||||||  | ||   || ||||| |||||||||||||||| |||||| ||||||||| ||||||    
T  17161426 caaacaactacgccaattcaaaccccatcaacatataaacatgtataa---tttatgaa-tgaatttaaacatgttccaacaataatcactcatcaattc 17161331  T
Q  736 acgatttacactcaaataaacaaaaatcatcaaa-atcacttaacaacaacaacaactatgaagtttaagcacat-aacacaacaatttcatgaagttta 833  Q
    |   || ||||| || ||| ||||||||| |||| |  ||||| || | |||||||||||||| ||||||||||| |||| | ||||| |||||||||||    
T  17161330 atcgttcacacttaattaagcaaaaatcaccaaacacaacttatcaccgacaacaactatgaa-tttaagcacataaacatatcaattccatgaagttta 17161232  T
Q  834 tcatac 839  Q
     |||||    
T  17161231 acatac 17161226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 777 - 858
Target Start/End: Complemental strand, 20910574 - 20910493
Alignment:
Q  777 aacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatactcacaaattcacttgaatt 858  Q
    |||||||| |||||||||||  ||||||||||||||| | ||||||||||||||||||||||| || |||||||| ||||||    
T  20910574 aacaacaataacaactatgagttttaagcacataacatatcaatttcatgaagtttatcatacccataaattcacatgaatt 20910493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 208 - 308
Target Start/End: Original strand, 16196053 - 16196153
Alignment:
Q  208 gaaacgttaaagtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcatt 307  Q
    |||||| ||||||||||||||| | |||||||||||||||||  ||  | |||||  |||||||||| |||||||||||| || ||||||||||||||||    
T  16196053 gaaacgataaagtttcacaatcccgttttacataaaagacggacaattatccacaataagacattcaccatattaaacacccattcatcattgattcatt 16196152  T
Q  308 c 308  Q
    |    
T  16196153 c 16196153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 651 - 770
Target Start/End: Original strand, 16175156 - 16175275
Alignment:
Q  651 attcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattcacgatttacactcaa 750  Q
    |||||||||||| ||||||||||||||  | ||  ||| |||||||||| ||||||||||| |||||| ||||||||| ||||||| | ||||||||  |    
T  16175156 attcaaaccccaacaacatacaaacatttataatcatttatgaagtgaaattaaacatgttccaacaataatcactcatcaattcatggtttacacttga 16175255  T
Q  751 ataaacaaaaatcatcaaaa 770  Q
     ||| ||||||| |||||||    
T  16175256 ttaagcaaaaatgatcaaaa 16175275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 205 - 338
Target Start/End: Complemental strand, 20911696 - 20911563
Alignment:
Q  205 aaggaaacgttaaagtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatca-tcattgatt 303  Q
    ||||||||| |||||||||| | |||||||| ||||||| |||||  | | | ||||| |  ||| ||||||||||||||||| |||||  ||||  |||    
T  20911696 aaggaaacgataaagtttcaaattcacatttcacataaa-gacggacatctagccacaacgtgaccttcatcatattaaacacccaatccctcatcaatt 20911598  T
Q  304 cattcacattctatcatactaacatgaattcaaag 338  Q
    ||||||||||| |||||||||||||||||||||||    
T  20911597 cattcacattcaatcatactaacatgaattcaaag 20911563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 782 - 845
Target Start/End: Complemental strand, 13761757 - 13761694
Alignment:
Q  782 caacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatactcacaa 845  Q
    |||||||||||||||||||||||| | ||||||||| |||||||||| |||||||||| |||||    
T  13761757 caacaacaactatgaagtttaagctcttaacacaaccatttcatgaaatttatcatacccacaa 13761694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 224 - 338
Target Start/End: Complemental strand, 3171704 - 3171590
Alignment:
Q  224 acaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcattcacattctatcatact 323  Q
    ||||||||||||||||||||||||||  ||| | |||||  | | |||| ||||| | |||||| ||||||| ||  |||| ||||||||| ||||||||    
T  3171704 acaatcacattttacataaaagacggacaactaaccacattatgccatttatcatttcaaacacccaatcattatcaattctttcacattcaatcatact 3171605  T
Q  324 aacatgaattcaaag 338  Q
    |||||||||| ||||    
T  3171604 aacatgaattgaaag 3171590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 232 - 321
Target Start/End: Original strand, 20147595 - 20147684
Alignment:
Q  232 attttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcattcacattctatcata 321  Q
    ||||| ||||||||||||  ||| | ||||| |||||||||||||||||| ||||| ||||||| |||| |||||||  |||||||||||    
T  20147595 attttgcataaaagacggacaactatccacatcaagacattcatcatattgaacacccaatcattattggttcattcttattctatcata 20147684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 502 - 564
Target Start/End: Original strand, 16196435 - 16196497
Alignment:
Q  502 attagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataacatcaatt 564  Q
    ||||||| | ||||||||||||  ||||||||||||||| |||||| ||||||||||||||||    
T  16196435 attagttaacatacatcaaaaggcaatcaaaacaacaacaaacatgcaatcataacatcaatt 16196497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 6461178 - 6461080
Alignment:
Q  219 gtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcattcacattctatc 318  Q
    |||||||||||||||||| |||||| |||||  ||| | ||||| || |||  |||||||||||||||| ||| |||||||| |||||||  ||||||||    
T  6461178 gtttcacaatcacattttgcataaa-gacggacaactaaccacatcatgactatcatcatattaaacacccaaccatcattgtttcattcttattctatc 6461080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 338
Target Start/End: Complemental strand, 9128408 - 9128350
Alignment:
Q  280 ttaaacactcaatcatcattgattcattcacattctatcatactaacatgaattcaaag 338  Q
    |||||||| ||||||| | | |||||||||||||| | |||||||||||||||||||||    
T  9128408 ttaaacacccaatcattaataattcattcacattcaaacatactaacatgaattcaaag 9128350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 267 - 338
Target Start/End: Original strand, 16093871 - 16093942
Alignment:
Q  267 gacattcatcatattaaacactcaatcatcattgattcattcacattctatcatactaacatgaattcaaag 338  Q
    ||||||||||||||||||||  ||||||| ||| ||| ||||  ||||||||||| || ||||||| |||||    
T  16093871 gacattcatcatattaaacatccaatcatgattaattaattcctattctatcatattagcatgaatacaaag 16093942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 17162289 - 17162235
Alignment:
Q  267 gacattcatcatattaaacactcaatcatcattgattcattcacattctatcata 321  Q
    ||||||||||||||||||| |  |||||||||| ||||||||  |||||||||||    
T  17162289 gacattcatcatattaaacccctaatcatcatttattcattcttattctatcata 17162235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 495 - 564
Target Start/End: Complemental strand, 8324314 - 8324245
Alignment:
Q  495 cttgtacattagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataacatcaatt 564  Q
    ||||||||||||||| || |||| |||||| | | |||||||| || ||| || ||||||||||||||||    
T  8324314 cttgtacattagtttgtaaacataaaaagacatttaaaacaaccacaaacttgaaatcataacatcaatt 8324245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 495 - 564
Target Start/End: Complemental strand, 8327513 - 8327444
Alignment:
Q  495 cttgtacattagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataacatcaatt 564  Q
    ||||||||||||||| || |||| |||||| | | |||||||| || ||| || ||||||||||||||||    
T  8327513 cttgtacattagtttgtaaacataaaaagacatttaaaacaaccacaaacttgaaatcataacatcaatt 8327444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 751
Target Start/End: Complemental strand, 13765432 - 13765379
Alignment:
Q  698 aatttaaacatgtttcaacaacaatcactcaccaattcacgatttacactcaaa 751  Q
    |||| ||||||||||||||||||||||| | |||||||| ||||| ||| ||||    
T  13765432 aattcaaacatgtttcaacaacaatcacactccaattcatgatttccacccaaa 13765379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 338
Target Start/End: Complemental strand, 13766516 - 13766479
Alignment:
Q  301 attcattcacattctatcatactaacatgaattcaaag 338  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  13766516 attcattcacattcaatcatactaacatgaattaaaag 13766479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 267 - 332
Target Start/End: Complemental strand, 15010232 - 15010167
Alignment:
Q  267 gacattcatcatattaaacactcaatcatcattgattcattcacattctatcatactaacatgaat 332  Q
    ||||| ||||||||||||||| | ||||||||||||||||   ||||| ||||||  |||||||||    
T  15010232 gacatccatcatattaaacaccccatcatcattgattcatcatcattcaatcatataaacatgaat 15010167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 137; Significance: 4e-71; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 636 - 858
Target Start/End: Original strand, 21654140 - 21654355
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    |||||||||||||||||| |||||||||||||||| ||||||          |||||||||||||| |||||||||||||||||||||||||||||||||    
T  21654140 caaacaaccacaccaatttaaaccccatcaacataaaaacat----------tcatgaagtgaattcaaacatgtttcaacaacaatcactcaccaattc 21654229  T
Q  736 acgatttacactcaaataaacaaaaatcatcaaaatcactt---aacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagttt 832  Q
    | ||||||||||||| ||| |||||||||||||||  ||||   ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21654230 atgatttacactcaattaatcaaaaatcatcaaaacaacttaacaacaacaacaacaaccatgaagtttaagcacataacacaacaatttcatgaagttt 21654329  T
Q  833 atcatactcacaaattcacttgaatt 858  Q
    ||||||| ||||||||||||||||||    
T  21654330 atcatacccacaaattcacttgaatt 21654355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 639 - 851
Target Start/End: Original strand, 28774163 - 28774365
Alignment:
Q  639 acaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattcacg 738  Q
    |||||||||||||||||||||||||||||||||||||||           ||||||||||||| ||||||||||||||||||||||| || ||||||| |    
T  28774163 acaaccacaccaattcaaaccccatcaacatacaaacatc----------catgaagtgaattcaaacatgtttcaacaacaatcacacatcaattcatg 28774252  T
Q  739 atttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcata 838  Q
    |||||||||||| ||  |||||||||||||||  ||| ||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  28774253 atttacactcaactagtcaaaaatcatcaaaacaactcaacaataacaacaactatgaagtttaagctcttaacacaacaatttcatgaagtttatcata 28774352  T
Q  839 ctcacaaattcac 851  Q
    | ||||| |||||    
T  28774353 cccacaatttcac 28774365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 637 - 856
Target Start/End: Original strand, 18995168 - 18995386
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    |||||||||||||||||||||| |||||| || | ||||||||||||| ||| |||||||||||| ||||||||||||||||||||||  ||||||||||    
T  18995168 aaacaaccacaccaattcaaactccatca-cacataaacataaacaaacattaatgaagtgaattcaaacatgtttcaacaacaatcatacaccaattca 18995266  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     || || |||| |||||  | |||||||||||||  ||| |||||||||||||||||||||||||||||   |||||||| || ||||||||||||||||    
T  18995267 tgaatttcacttaaatagtcgaaaatcatcaaaacaactcaacaacaacaacaactatgaagtttaagctattaacacaataaattcatgaagtttatca 18995366  T
Q  837 tactcacaaattcacttgaa 856  Q
    ||| ||||| ||||| ||||    
T  18995367 tacccacaatttcacatgaa 18995386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 216 - 338
Target Start/End: Original strand, 17739971 - 17740093
Alignment:
Q  216 aaagtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcattcacattct 315  Q
    ||||||||| ||||||||||| ||||||||||||  ||| | ||| | || |||||||| |||||||||||||||||||||||||||||||||  |||||    
T  17739971 aaagtttcaaaatcacattttgcataaaagacggataactatccatatcatgacattcaacatattaaacactcaatcatcattgattcattcttattct 17740070  T
Q  316 atcatactaacatgaattcaaag 338  Q
    ||||||  | ||||||| |||||    
T  17740071 atcatatcatcatgaatacaaag 17740093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 216 - 339
Target Start/End: Complemental strand, 34897958 - 34897835
Alignment:
Q  216 aaagtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcattcacattct 315  Q
    ||||||||  |||||||||| |  |||||||| |  ||| | |||||  ||||| |||||||||||||||||||||||||||| ||||||| |  |||||    
T  34897958 aaagtttcgaaatcacatttcatgtaaaagacagacaactatccacattaagacgttcatcatattaaacactcaatcatcatcgattcatccttattct 34897859  T
Q  316 atcatactaacatgaattcaaagc 339  Q
    ||||||  ||||||||||||||||    
T  34897858 atcatataaacatgaattcaaagc 34897835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 270 - 333
Target Start/End: Original strand, 22577012 - 22577075
Alignment:
Q  270 attcatcatattaaacactcaatcatcattgattcattcacattctatcatactaacatgaatt 333  Q
    |||||| |||| |||||| ||| ||||||  |||||||||||||||||||||||| ||||||||    
T  22577012 attcattatatcaaacacccaaacatcatcaattcattcacattctatcatactagcatgaatt 22577075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 23154082 - 23153984
Alignment:
Q  219 gtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcattcacattctatc 318  Q
    ||||||||| |||||||| || ||| |||||  ||| | ||||| || | ||||||||||||||||||| ||||||| ||||||||||||  ||||||||    
T  23154082 gtttcacaaccacattttgcacaaa-gacggacaactaaccacatcatggcattcatcatattaaacacccaatcataattgattcattcttattctatc 23153984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 23565339 - 23565241
Alignment:
Q  219 gtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcattcacattctatc 318  Q
    ||||||||| |||||||| || ||| |||||  ||| | ||||| || | ||||||||||||||||||| ||||||| ||||||||||||  ||||||||    
T  23565339 gtttcacaaccacattttgcacaaa-gacggacaactaaccacatcatggcattcatcatattaaacacccaatcataattgattcattcttattctatc 23565241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 276 - 338
Target Start/End: Original strand, 24280756 - 24280818
Alignment:
Q  276 catattaaacactcaatcatcattgattcattcacattctatcatactaacatgaattcaaag 338  Q
    ||||||| |||| ||||||||||  |||||||| ||||||||||||  |||||||||||||||    
T  24280756 catattagacacccaatcatcatcaattcattctcattctatcatataaacatgaattcaaag 24280818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 6e-67; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 637 - 858
Target Start/End: Original strand, 20407782 - 20408003
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||||||||| |||||| |||||||||||||||||||||||||||    
T  20407782 aaacaaccacaccaattcaaaccccattaacatacacacataaataaaaatttatgaagtgaattcaaacatatttcaacaacaatcactcaccaattca 20407881  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
      ||||||| |||| ||| ||||||||||||||| |||||| ||| |||||||||| |||||||||||| | |||  |||||||||| ||||| ||||||    
T  20407882 taatttacattcaattaatcaaaaatcatcaaaaccacttatcaagaacaacaactttgaagtttaagctcttaaatcaacaatttcgtgaagattatca 20407981  T
Q  837 tactcacaaattcacttgaatt 858  Q
    ||| ||||||||||||||||||    
T  20407982 tacccacaaattcacttgaatt 20408003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 690 - 858
Target Start/End: Original strand, 21719667 - 21719835
Alignment:
Q  690 atgaagtgaatttaaacatgtttcaacaacaatcactcaccaattcacgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaaca 789  Q
    |||||||| ||| || | ||||||||||||||| |||||||| |||| ||||||||||||| ||| ||||||||| |||||  ||||| |||||||||||    
T  21719667 atgaagtgcattcaatcgtgtttcaacaacaattactcaccatttcatgatttacactcaattaatcaaaaatcaccaaaacaacttatcaacaacaaca 21719766  T
Q  790 actatgaagtttaagcacataacacaacaatttcatgaagtttatcatactcacaaattcacttgaatt 858  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  21719767 actatgaagtttaagcacataacacaacaatttcatgaagtttatcatacctacaaattcacatgaatt 21719835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 637 - 856
Target Start/End: Original strand, 21423197 - 21423416
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||| ||| |||||||||||| |||||||||||| ||||||||   ||||||||||    
T  21423197 aaacaaccacaccaattcaaaccccatcaacacataaacataaacaaacattaatgaagtgaattcaaacatgtttcaccaacaatcttacaccaattca 21423296  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     || || ||||||||||  |||||||||| ||||  ||| |||||||||||||||||||||||||| |     ||||||||||| |||| ||||||||||    
T  21423297 tgaatttcactcaaatagtcaaaaatcatgaaaacaactcaacaacaacaacaactatgaagtttaggttatcaacacaacaatctcataaagtttatca 21423396  T
Q  837 tactcacaaattcacttgaa 856  Q
    ||| ||||| ||||| ||||    
T  21423397 tacccacaatttcacatgaa 21423416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 680 - 858
Target Start/End: Original strand, 22615139 - 22615317
Alignment:
Q  680 acaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattcacgatttacactcaaataaacaaaaatcatcaaaatcacttaac 779  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||| ||| || || |||| ||||  |||||      
T  22615139 acaaacattcatgaagtgaattcaaacatgtttcaacaacaatcactcgccaattcatgatttacactcaattaatcataagtcattaaaacaacttata 22615238  T
Q  780 aacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatactcacaaattcacttgaatt 858  Q
    ||||| ||||||||||||||||||||||| |||||  |||||||||||||||||||||||  ||||  |||||||||||    
T  22615239 aacaataacaactatgaagtttaagcacaaaacactgcaatttcatgaagtttatcataccaacaatatcacttgaatt 22615317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 637 - 856
Target Start/End: Complemental strand, 18622116 - 18621898
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    ||||||||||||||||| ||||| ||| || | |||| |||||||||||||| ||||| |||||| || | |||||||||||||||||   ||||| |||    
T  18622116 aaacaaccacaccaatttaaaccacattaatacacaaccataaacaaatattaatgaaatgaattcaa-cttgtttcaacaacaatcataaaccaaatca 18622018  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     | |||||| |||||||| |||||||||||||||  ||| |||| ||||||||||||||| ||||||||   ||||||||||||||| ||||||| ||||    
T  18622017 tggtttacattcaaataatcaaaaatcatcaaaacaactcaacaccaacaacaactatgaggtttaagctattaacacaacaatttcttgaagttcatca 18621918  T
Q  837 tactcacaaattcacttgaa 856  Q
    ||| || || ||||| ||||    
T  18621917 tacccataatttcacatgaa 18621898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 465 - 565
Target Start/End: Original strand, 20407610 - 20407710
Alignment:
Q  465 atcccctttgacccaaattcgttcccaaagcttgtacattagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataacatcaatt 564  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||||| ||||||||||| | ||||||||||||| ||| ||||||||||||| |||||    
T  20407610 atcccctttgacccaaattcgtccccaaatcttatacattagtttataaacatcaaaagacattcaaaacaacaacaaacttggaatcataacaccaatt 20407709  T
Q  565 t 565  Q
    |    
T  20407710 t 20407710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 782 - 856
Target Start/End: Complemental strand, 23475907 - 23475833
Alignment:
Q  782 caacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatactcacaaattcacttgaa 856  Q
    ||||||||||||||||||||| || | |||||||||||||||||||| |||||||||| ||||| ||||| ||||    
T  23475907 caacaacaactatgaagtttaggctcttaacacaacaatttcatgaattttatcatacccacaatttcacatgaa 23475833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 744 - 856
Target Start/End: Original strand, 21978628 - 21978740
Alignment:
Q  744 cactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatactcac 843  Q
    ||||||||||  |||||||||| ||||  ||| ||||||| |||||| |||||||||||||    ||||||||||  ||||||||||||||||||| |||    
T  21978628 cactcaaatagtcaaaaatcatgaaaactactaaacaacagcaacaattatgaagtttaagatattaacacaacatattcatgaagtttatcatacccac 21978727  T
Q  844 aaattcacttgaa 856  Q
    || ||||| ||||    
T  21978728 aatttcacatgaa 21978740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 780 - 838
Target Start/End: Original strand, 21402675 - 21402733
Alignment:
Q  780 aacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcata 838  Q
    |||||||||||| ||||  ||||||||||||||||| ||||||||||||||||||||||    
T  21402675 aacaacaacaaccatgagttttaagcacataacacatcaatttcatgaagtttatcata 21402733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 216 - 308
Target Start/End: Complemental strand, 9167383 - 9167291
Alignment:
Q  216 aaagtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcattc 308  Q
    ||||||||| |||||||||| | |||||||||||  ||| | |  || || |||||||||||||||||||||||||||| | |||||||||||    
T  9167383 aaagtttcaaaatcacatttcatataaaagacggacaactatctgcatcatgacattcatcatattaaacactcaatcaactttgattcattc 9167291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 449 - 522
Target Start/End: Original strand, 22614969 - 22615043
Alignment:
Q  449 aaaatccttgtttttaatcccctttgacccaaattcgttcccaaagcttgtacattagtttata-tacatcaaaa 522  Q
    ||||||| | ||||| ||||||||||||||||||||||  ||||| ||| |||||||||||||| ||||||||||    
T  22614969 aaaatccctatttttgatcccctttgacccaaattcgtcaccaaaacttatacattagtttatattacatcaaaa 22615043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 680
Target Start/End: Original strand, 21719602 - 21719645
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaa 680  Q
    ||||||| |||||||||||||||||| |||||| ||||||||||    
T  21719602 aaacaactacaccaattcaaaccccaacaacattcaaacataaa 21719645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 276 - 338
Target Start/End: Original strand, 21422155 - 21422217
Alignment:
Q  276 catattaaacactcaatcatcattgattcattcacattctatcatactaacatgaattcaaag 338  Q
    ||||||| |||| || |||||||  |||||||| ||||||||||||  |||||||||||||||    
T  21422155 catattagacacccagtcatcatcaattcattctcattctatcatataaacatgaattcaaag 21422217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 22614295 - 22614340
Alignment:
Q  292 tcatcattgattcattcacattctatcatactaacatgaattcaaa 337  Q
    |||||||  ||| ||||||| |||||||||||||||||||||||||    
T  22614295 tcatcatcaattaattcacaatctatcatactaacatgaattcaaa 22614340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 564
Target Start/End: Original strand, 22615037 - 22615074
Alignment:
Q  527 atcaaaacaacaaccaacatggaatcataacatcaatt 564  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  22615037 atcaaaacaacaacaaacatggaatcataatatcaatt 22615074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 6e-64; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 658 - 858
Target Start/End: Original strand, 24194145 - 24194345
Alignment:
Q  658 ccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattcacgatttacactcaaataaaca 757  Q
    |||||| |||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||| |||||| |||| |||||||| |||  |    
T  24194145 ccccatgaacatacaaacataaacaaacatccatgaagtgaattcaaacatgtttcaacaacaatcactcacaaattcatgattcacactcaattaataa 24194244  T
Q  758 aaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatactcacaaattcacttgaat 857  Q
    |||||||||||||  || || ||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  24194245 aaaatcatcaaaacgacatatcaacaacaacaactatgaagtttaaactcttaatacaacaatttcatgaagtttatcatacccacaaattcacttgaat 24194344  T
Q  858 t 858  Q
    |    
T  24194345 t 24194345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 636 - 858
Target Start/End: Original strand, 17364097 - 17364319
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    ||||||||||||| || ||||||||||||||||| |||||||||| ||| ||| || |||||||||||| ||||||||||||| ||||||||||||||||    
T  17364097 caaacaaccacacaaagtcaaaccccatcaacatgcaaacataaataaacatttattaagtgaatttaagcatgtttcaacaataatcactcaccaattc 17364196  T
Q  736 acgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatc 835  Q
    |  |  |||||| |  |||||||||||||||||||  ||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||    
T  17364197 attaaatacacttagttaaacaaaaatcatcaaaacaacttatcaacaacaacaactatgaattttaagcacataacatatcaatttcatgaagtttatc 17364296  T
Q  836 atactcacaaattcacttgaatt 858  Q
    || | || |||||||| ||||||    
T  17364297 atgcccataaattcacatgaatt 17364319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 637 - 856
Target Start/End: Complemental strand, 19316642 - 19316424
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||| |||||| | ||||||| |||||| ||||||||||||| | |||||||||||    
T  19316642 aaacaaccacaccaattcaaacccaa-caacatataaacataaacaaacattcataatgtgaattcaaacatctttcaacaacaattaatcaccaattca 19316544  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     |||||| |||||||||   ||||||||||||||| ||| |||||||| ||||| |||||||||||||| | ||||||||||||||||||||||||||||    
T  19316543 tgatttatactcaaatagttaaaaatcatcaaaataactcaacaacaaaaacaattatgaagtttaagctcttaacacaacaatttcatgaagtttatca 19316444  T
Q  837 tactcacaaattcacttgaa 856  Q
    ||| || || ||||| ||||    
T  19316443 tacccaaaatttcacatgaa 19316424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 637 - 858
Target Start/End: Original strand, 17169532 - 17169751
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| || ||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  17169532 aaacaactacaccaatttaaaccccatcaacatacaaacataaaccaacatttatgaagtgaattcaaacatgtttcaacaacaatcactcaccaattca 17169631  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     ||||||||||  | ||| |||||||| || |||  ||||| ||| |||||| | |||||||||||||  | ||||||||||||| |||||||||||||     
T  17169632 tgatttacact--attaatcaaaaatcttctaaacaacttatcaaaaacaactaatatgaagtttaagatcttaacacaacaattacatgaagtttatcg 17169729  T
Q  837 tactcacaaattcacttgaatt 858  Q
    ||| || |||||||||||||||    
T  17169730 tacacataaattcacttgaatt 17169751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 637 - 858
Target Start/End: Original strand, 26727652 - 26727868
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    ||||||||||||||||||||||| |||| |||||||||||||   ||| ||| || ||||||||| |||  |||||||||||||||||||||||||||||    
T  26727652 aaacaaccacaccaattcaaacctcatccacatacaaacatatgtaaacatttattaagtgaattcaaa--tgtttcaacaacaatcactcaccaattca 26727749  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     ||||||||||| | ||| |||||||||||| ||  ||||   | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26727750 tgatttacactctagtaagcaaaaatcatcataacaactt---atcaacaacaactatgaagtttaaacacataacacaacaatttcatgaagtttatca 26727846  T
Q  837 tactcacaaattcacttgaatt 858  Q
    ||  ||||||||||| ||||||    
T  26727847 tatccacaaattcacatgaatt 26727868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 637 - 856
Target Start/End: Original strand, 19268373 - 19268595
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    ||||||||||||||||||||| |||||||||| | ||||||||| | | ||| |||||||||||| ||||| ||||||||||||||||  || |||||||    
T  19268373 aaacaaccacaccaattcaaaacccatcaacacataaacataaatagacattaatgaagtgaattcaaacacgtttcaacaacaatcatacatcaattca 19268472  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcact---taacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagttta 833  Q
     || || ||||||||||  |||||||||| ||||  |||    ||||||||||||||||||||||||||||    |||||| |||| |||||||  ||||    
T  19268473 tgaatttcactcaaatagtcaaaaatcatgaaaacaactcaacaacaacaacaacaactatgaagtttaagatattaacaccacaaattcatgacattta 19268572  T
Q  834 tcatactcacaaattcacttgaa 856  Q
    |||||| ||||| ||||| ||||    
T  19268573 tcatacccacaatttcacatgaa 19268595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 637 - 750
Target Start/End: Original strand, 22468511 - 22468624
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||| | |||| ||||||||||||| || ||| ||| |||||||||    
T  22468511 aaacaaccacaccaattcaaatcccatcaacatacaaacataaacaaacatttatgaaataaattcaaacatgtttcaagaataatgactgaccaattca 22468610  T
Q  737 cgatttacactcaa 750  Q
     |||| ||||||||    
T  22468611 tgattcacactcaa 22468624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 690 - 838
Target Start/End: Original strand, 26867849 - 26867997
Alignment:
Q  690 atgaagtgaatttaaacatgtttcaacaacaatcactcaccaattcacgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaaca 789  Q
    ||||||||||||||||| |||| |||||| ||||||||| ||||||| | |||||||| || ||| |||||| ||||||||  ||||| ||  |||||||    
T  26867849 atgaagtgaatttaaacttgttccaacaataatcactcatcaattcatggtttacacttaattaagcaaaaaacatcaaaacaacttatcacaaacaaca 26867948  T
Q  790 actatgaagtttaagcacat-aacacaacaatttcatgaagtttatcata 838  Q
    ||||||||  |||||||||| |||| | ||||| ||||||||||| ||||    
T  26867949 actatgaa-attaagcacataaacatatcaattccatgaagtttaacata 26867997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 382 - 564
Target Start/End: Original strand, 26727392 - 26727579
Alignment:
Q  382 cgagttacaccagaataggtcccctattcttggttgttccctctcgagaactctccaattttca-ccaaaaatccttgtttttaatcccctttgacccaa 480  Q
    |||||||||||| || | |||||||||||||||   |||||||||| |||| | ||| |||||| |||||||||| ||||||| |||||||||||||| |    
T  26727392 cgagttacaccataacatgtcccctattcttgggctttccctctcgggaacccaccacttttcacccaaaaatcc-tgtttttgatcccctttgaccc-a 26727489  T
Q  481 attcgttcccaaagcttgtacattagtt------tatatacatcaaaagataatcaaaacaacaaccaacatggaatcataacatcaatt 564  Q
    ||| || ||| || ||||| ||||||||      |||||| ||||||||  |||| |||||||||| || ||||||||||| ||||||||    
T  26727490 atttgtcccctaaacttgttcattagttaatatatatatatatcaaaaggcaatcgaaacaacaacaaatatggaatcatatcatcaatt 26727579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 636 - 747
Target Start/End: Original strand, 13456898 - 13457009
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    ||||||||||||| ||||||||||||| |||||||||| | ||   ||  ||| |||||||||||||||||||||| |||||| ||||||||| |||||     
T  13456898 caaacaaccacacaaattcaaaccccaacaacatacaagcttatgtaatcatttatgaagtgaatttaaacatgttccaacaataatcactcatcaattg 13456997  T
Q  736 acgatttacact 747  Q
    | | ||||||||    
T  13456998 atggtttacact 13457009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 636 - 777
Target Start/End: Original strand, 26132609 - 26132749
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    |||||||| ||| ||||||||| || | ||||||| ||||||| | ||  ||| || || |||||||| |||||||||||||| ||||||||||||||||    
T  26132609 caaacaacaacaacaattcaaatccaa-caacataaaaacatatataatcatttatcaaatgaatttagacatgtttcaacaataatcactcaccaattc 26132707  T
Q  736 acgatttacactcaaataaacaaaaatcatcaaaatcactta 777  Q
    | |||||||||| || | | |||| |||| |||||| |||||    
T  26132708 atgatttacacttaattgagcaaacatcaccaaaataactta 26132749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 370 - 540
Target Start/End: Original strand, 17363835 - 17364003
Alignment:
Q  370 aactcgccacaacgagttacaccagaataggtcccctattcttggttgttccctctcgagaactctccaattttcacca-aaaatccttgtttttaatcc 468  Q
    |||||||| |||||||||||||||| ||||   |||| ||||||| | |||||||||| |||| |  || ||||||||  |||||||  |||||| ||||    
T  17363835 aactcgcc-caacgagttacaccaggatagaaaccctgttcttgggttttccctctcgggaacccatca-ttttcaccccaaaatccc-gtttttgatcc 17363931  T
Q  469 cctttgacccaaattcgttcccaaagcttgtacattagtttatatacatcaaaagataatcaaaacaacaac 540  Q
    |||| |||||| |||||| ||| || |||||  ||||||| | ||||||||||||  |||||||||||||||    
T  17363932 ccttcgacccatattcgtcccccaaacttgtttattagttaacatacatcaaaaggcaatcaaaacaacaac 17364003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 488 - 564
Target Start/End: Original strand, 22468396 - 22468472
Alignment:
Q  488 cccaaagcttgtacattagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataacatcaatt 564  Q
    |||||| |||||||||||||||||| ||||||||||  | | ||||| ||||| ||| | ||||||||||| |||||    
T  22468396 cccaaaacttgtacattagtttataaacatcaaaaggcatttaaaaccacaacaaactttgaatcataacaccaatt 22468472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 267 - 338
Target Start/End: Original strand, 19267319 - 19267390
Alignment:
Q  267 gacattcatcatattaaacactcaatcatcattgattcattcacattctatcatactaacatgaattcaaag 338  Q
    |||| |||||| ||||||||| ||||| | ||  |||||||||||||  ||| |||||||||||||||||||    
T  19267319 gacaatcatcaaattaaacacccaatccttatcaattcattcacattaaatcttactaacatgaattcaaag 19267390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 455
Target Start/End: Original strand, 19268102 - 19268192
Alignment:
Q  365 tgggcaactcgccacaacgagttacaccagaataggtc-ccctattcttggttgttccctctcgagaactctccaattttcaccaaaaatcc 455  Q
    ||||||||| |||| | ||||||||||||||| ||||| |||| || ||| |||||||||||||  ||||| ||| |||||||| |||||||    
T  19268102 tgggcaactagcca-agcgagttacaccagaacaggtcaccctgttattgattgttccctctcggaaactccccatttttcacccaaaatcc 19268192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 754 - 856
Target Start/End: Original strand, 31479591 - 31479693
Alignment:
Q  754 aacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatactcacaaattcactt 853  Q
    ||||||||||| || ||  |||||  || ||||||||| ||||  |||||||||||||  |  ||||||||||||||||||||||| || || ||||| |    
T  31479591 aacaaaaatcaccataacaacttattaataacaacaaccatgagttttaagcacataattcgtcaatttcatgaagtttatcatacccataatttcacat 31479690  T
Q  854 gaa 856  Q
    |||    
T  31479691 gaa 31479693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 124; Significance: 2e-63; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 669 - 858
Target Start/End: Original strand, 2939 - 3125
Alignment:
Q  669 tacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattcacgatttacactcaaataaacaaaaatcatcaa 768  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||| |||||||  | |||||||||| ||    
T  2939 tacaaacataaacaaacattcatgaagtgaatttaaacatgtttcaacaacaaccactcacaaattcatgatttaaactcaaactagcaaaaatcataaa 3038  T
Q  769 aatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatactcacaaattcacttgaatt 858  Q
    ||||||||   |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||    
T  3039 aatcactt---aacagcaacaactatgaagtttaagcacataatacaacaatttcatgaagtttattatactcataaattcacttgaatt 3125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 120; Significance: 6e-61; HSPs: 2)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 637 - 858
Target Start/End: Original strand, 1639 - 1857
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    ||||||||||||||||||||| ||||| |||||||||||| | ||||| ||| |||||||||||||||||| ||||||||||||||||||||| ||||||    
T  1639 aaacaaccacaccaattcaaatcccataaacatacaaacacatacaaacatttatgaagtgaatttaaacaagtttcaacaacaatcactcacaaattca 1738  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
      | |||||||||| |||  ||||||||||||||| ||||   |||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||    
T  1739 taacttacactcaattaataaaaaatcatcaaaataactt---aacaacaaaaactatgaagtttaagctcttaacacaacaatttcatgaagtttatca 1835  T
Q  837 tactcacaaattcacttgaatt 858  Q
    ||| ||||  ||||| ||||||    
T  1836 tacccacatgttcacatgaatt 1857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 383 - 565
Target Start/End: Original strand, 1385 - 1568
Alignment:
Q  383 gagttacaccagaataggtc-ccctattcttggttgttccctctcgagaactctccaattttcaccaaaaatccttgtttttaatcccctttgacccaaa 481  Q
    |||||||||||||| ||||| |||| || ||||| ||||||||||| ||||| ||||||||||||| ||||||     |||| ||||||||   ||||||    
T  1385 gagttacaccagaacaggtcaccctgtt-ttggtcgttccctctcgggaact-tccaattttcacctaaaatcgccaattttgatccccttgaccccaaa 1482  T
Q  482 ttcgttcccaaagcttgtacattagtttatatacatcaaaa--gataatcaaaacaacaaccaacatggaatcataacatcaattt 565  Q
    |||| ||||||| |||||||| ||||||||| |||||||||  || | ||||||||||||| ||||| ||||||||||| ||||||    
T  1483 ttcgatcccaaaacttgtacactagtttataaacatcaaaaaagacattcaaaacaacaacaaacatcgaatcataacaccaattt 1568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 105; Significance: 5e-52; HSPs: 5)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 414 - 570
Target Start/End: Complemental strand, 206220 - 206065
Alignment:
Q  414 gttgttccctctcgagaactctccaattttcaccaaaaatccttgtttttaatcccctttgacccaaattcgttcccaaagcttgtacattagtttatat 513  Q
    |||||||||||||| ||||||||| ||||| ||| |||||   ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  206220 gttgttccctctcgggaactctccgatttt-accgaaaatttctgtttttgatcccctttgacccaaattcgttcccaaaacttgtacattagtttttat 206122  T
Q  514 acatcaaaagataatcaaaacaacaaccaacatggaatcataacatcaattttcacc 570  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  206121 acatcaaaagataatcaaaccaacaacaaacatggaatcataacatcaattttcacc 206065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 720 - 858
Target Start/End: Complemental strand, 204920 - 204779
Alignment:
Q  720 aatcactcaccaattcacgatttacactcaaataaacaaaaatcatcaaaa---tcacttaacaacaacaacaactatgaagtttaagcacataacacaa 816  Q
    ||||||||| ||||| | |||||||||||| |||| |||||||||| ||||   |||||||||||||||||||| |||||||||||| || |||||||||    
T  204920 aatcactcatcaatttatgatttacactcatataagcaaaaatcataaaaaaaatcacttaacaacaacaacaattatgaagtttaaacatataacacaa 204821  T
Q  817 caatttcatgaagtttatcatactcacaaattcacttgaatt 858  Q
    ||||||||||||||||||||  | |||||||||||| |||||    
T  204820 caatttcatgaagtttatcaagcccacaaattcactcgaatt 204779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 636 - 717
Target Start/End: Complemental strand, 205999 - 205918
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaaca 717  Q
    |||| ||||||||||| |||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  205999 caaataaccacaccaactcaaacaccaccaacatacaaacataaacaaaaattcatgaagtgaatttaaacatgttttaaca 205918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 636 - 717
Target Start/End: Complemental strand, 210969 - 210888
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaaca 717  Q
    |||| ||||||||||| |||||| |||| |||||||||| ||||||||| ||| ||||||||| ||||||||||||| ||||    
T  210969 caaataaccacaccaactcaaactccattaacatacaaatataaacaaaaattgatgaagtgattttaaacatgttttaaca 210888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 408 - 493
Target Start/End: Complemental strand, 211147 - 211062
Alignment:
Q  408 ttcttggttgttccctctcgagaactctccaattttcaccaaaaatccttgtttttaatcccctttgacccaaattcgttcccaaa 493  Q
    |||| ||||||||||||||  ||||||||| ||||| ||| |||||    |||||| || |||||||||||||||| |||||||||    
T  211147 ttctcggttgttccctctcaggaactctccgatttttaccgaaaatttccgtttttgattccctttgacccaaatttgttcccaaa 211062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 2e-51; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 637 - 858
Target Start/End: Complemental strand, 14566744 - 14566539
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    |||||||||||||||||||||| |||| |||| ||||||||||||||| |||||             ||||||||||| ||||||||||||| |||||||    
T  14566744 aaacaaccacaccaattcaaactccattaacacacaaacataaacaaacattca-------------aacatgtttcatcaacaatcactcatcaattca 14566658  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     ||||||||||||| ||| ||||| || ||||||| ||||||||||||||||   |||||||||||||| ||||||||||||||||||||||||||||||    
T  14566657 tgatttacactcaattaatcaaaagtcttcaaaataacttaacaacaacaac---tatgaagtttaagctcataacacaacaatttcatgaagtttatca 14566561  T
Q  837 tactcacaaattcacttgaatt 858  Q
    ||| ||||||||||| ||||||    
T  14566560 tacccacaaattcacatgaatt 14566539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 637 - 856
Target Start/End: Complemental strand, 19725573 - 19725361
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    |||||||||||||||||||| | | |  |||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||| |||||||||||    
T  19725573 aaacaaccacaccaattcaatctc-acgaacatacaaacataaacaaacattaatgaagtgaattcaaacatgtttcaacaacaatcaatcaccaattca 19725475  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     |||||||| |||||||  |||||||||||||||| ||| ||||||||   ||||||| |||||||||| |||    ||||||||||||||| |||||||    
T  19725474 tgatttacagtcaaatagtcaaaaatcatcaaaataactcaacaacaa---caactataaagtttaagctcat---gcaacaatttcatgaaatttatca 19725381  T
Q  837 tactcacaaattcacttgaa 856  Q
    ||||||||| ||||| ||||    
T  19725380 tactcacaatttcacatgaa 19725361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 637 - 851
Target Start/End: Complemental strand, 19977503 - 19977284
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    |||||||||||  |||||||||||||| ||||||||||| |  | ||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  19977503 aaacaaccacagtaattcaaaccccattaacatacaaacgtgtataaaaatttatgaagtgaatttaaacatgtttcaacaacaatgactcaccaattca 19977404  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcac----ttaacaacaacaacaactatgaagtttaagcacataacac-aacaatttcatgaagtt 831  Q
     || |||||| ||| |||| | |||||| |||||  ||    | |||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  19977403 tgacttacacccaattaaatacaaatcaccaaaacaacattatcaacaacaacaacaactatgaagttgaagcatataacacaaacaatttcatgaagtt 19977304  T
Q  832 tatcatactcacaaattcac 851  Q
    |||||||| |||||||||||    
T  19977303 tatcatacccacaaattcac 19977284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 637 - 856
Target Start/End: Original strand, 10974827 - 10975046
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    ||||||||||| ||| |||||||||||||||| | ||||||||||||| ||| |||||||||||| ||||| |||||||||| |||||  || |||||||    
T  10974827 aaacaaccacatcaactcaaaccccatcaacacataaacataaacaaacattaatgaagtgaattcaaacaagtttcaacaagaatcatacatcaattca 10974926  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     || || |||||||||||  ||||||||| ||||  ||| ||||||||||| ||||||||| |||||||    ||||||||||| |||||||||||||||    
T  10974927 tgaatttcactcaaataataaaaaatcattaaaacaactcaacaacaacaaaaactatgaaatttaagctaccaacacaacaatctcatgaagtttatca 10975026  T
Q  837 tactcacaaattcacttgaa 856  Q
    ||| | ||| ||||| ||||    
T  10975027 tacccgcaatttcacatgaa 10975046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 636 - 790
Target Start/End: Original strand, 14354227 - 14354381
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    ||||||||||||| ||||||||||||||||||| ||||||||| | ||| ||| || ||||||||| |||||||||||||||| |||||||||  |||||    
T  14354227 caaacaaccacacaaattcaaaccccatcaacagacaaacatatataaacatttataaagtgaattcaaacatgtttcaacaagaatcactcattaattc 14354326  T
Q  736 acgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaa 790  Q
    | ||||||||||||| ||| |||||||||||||||  ||||| ||||||||||||    
T  14354327 atgatttacactcaattaatcaaaaatcatcaaaacaacttatcaacaacaacaa 14354381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 636 - 842
Target Start/End: Complemental strand, 23294462 - 23294256
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    ||||||| ||||| |||||||| || ||||||||||||||||    ||| ||  ||||||||||||||||||| ||| ||||| ||||||| | ||||||    
T  23294462 caaacaatcacactaattcaaaaccaatcaacatacaaacatgtgtaaacatctatgaagtgaatttaaacatattttaacaataatcacttatcaattc 23294363  T
Q  736 acgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatc 835  Q
    |  ||||| |||||||||| | |||||||||||||  ||||| || |||||||||||||||| |||| |||||||||| ||||| ||||||||||||| |    
T  23294362 ataatttagactcaaataagctaaaatcatcaaaacaacttatcagcaacaacaactatgaattttatgcacataacataacaaattcatgaagtttaac 23294263  T
Q  836 atactca 842  Q
    |||||||    
T  23294262 atactca 23294256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 637 - 749
Target Start/End: Original strand, 23299586 - 23299698
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||| ||||||||| |||||||    
T  23299586 aaacaaccacaccaattcaaactccatcaacatacaaacataaataaacatttatgaagtgaatttaaacatgtttcaacaataatcactcatcaattca 23299685  T
Q  737 cgatttacactca 749  Q
     ||||||||||||    
T  23299686 tgatttacactca 23299698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 676 - 856
Target Start/End: Original strand, 19980203 - 19980383
Alignment:
Q  676 ataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattcacgatttacactcaaataaacaaaaatcatcaaaatcact 775  Q
    ||||||||| ||| |||| ||||||| |||||| ||||||||||||||| ||||||||||| |||| |||||||| ||| ||||||   ||||||  | |    
T  19980203 ataaacaaacattaatgatgtgaattcaaacatatttcaacaacaatcaatcaccaattcatgattcacactcaattaatcaaaaaaattcaaaacaagt 19980302  T
Q  776 taacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatactcacaaattcacttgaa 856  Q
     ||| ||||||||||| |||  |||| ||| | ||||||||||||||||||||||||||||||| ||| | ||||| ||||    
T  19980303 caacgacaacaacaaccatggtgtttgagctcttaacacaacaatttcatgaagtttatcatacccacgatttcacatgaa 19980383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 636 - 839
Target Start/End: Complemental strand, 12463870 - 12463667
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    ||||| |||||||||||||||   ||||||||||||||||||  | ||  ||| |||||||| ||||||||||||| ||| || ||||| ||| ||||||    
T  12463870 caaaccaccacaccaattcaacatccatcaacatacaaacatgtaaaataatttatgaagtgcatttaaacatgttccaagaataatcattcatcaattc 12463771  T
Q  736 acgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatc 835  Q
    | | |||||||| |||| | ||||||||| |||||  ||||| ||  ||||||||||||||| ||||||| ||||||| | ||||| | ||||||||| |    
T  12463770 atggtttacacttaaatgagcaaaaatcaccaaaacaacttatcactaacaacaactatgaattttaagcccataacatatcaattccttgaagtttaac 12463671  T
Q  836 atac 839  Q
    ||||    
T  12463670 atac 12463667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 437 - 564
Target Start/End: Original strand, 14354028 - 14354155
Alignment:
Q  437 caattttcaccaaaaatccttgtttttaatcccctttgacccaaattcgttcccaaagcttgtacattagtttatatacatcaaaagataatcaaaacaa 536  Q
    ||||||||| | |||| ||| | |||| |||||||||||||||||||||| |||||| ||||| ||||| |||| ||||||||||||  |||||||||||    
T  14354028 caattttcatccaaaaacctcgattttgatcccctttgacccaaattcgtccccaaaacttgtgcattaatttacatacatcaaaaggcaatcaaaacaa 14354127  T
Q  537 caaccaacatggaatcataacatcaatt 564  Q
    |||| | |||||||||||||||||||||    
T  14354128 caactatcatggaatcataacatcaatt 14354155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 459 - 566
Target Start/End: Complemental strand, 19977681 - 19977574
Alignment:
Q  459 tttttaatcccctttgacccaaattcgttcccaaagcttgtacattagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataaca 558  Q
    |||||||||| |||||||||| |||||| |||||| ||||||||||||||||||||||| ||||   ||||| ||||||||| |||||||||||||||||    
T  19977681 tttttaatccactttgacccatattcgtccccaaaacttgtacattagtttatatacataaaaatgcaatcataacaacaacaaacatggaatcataaca 19977582  T
Q  559 tcaatttt 566  Q
    ||||||||    
T  19977581 tcaatttt 19977574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 636 - 815
Target Start/End: Original strand, 12487672 - 12487848
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    ||||||||| ||||||||||||   |||||||||||||||||  | ||| ||| ||| ||||||||||||||| ||||||||| ||||||||| ||||||    
T  12487672 caaacaacctcaccaattcaaaattcatcaacatacaaacatgtataaacatttatgtagtgaatttaaacatatttcaacaataatcactcatcaattc 12487771  T
Q  736 acgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacaca 815  Q
    |   || ||||| |||||| |||||||||||||||   | |   | || ||||||||||||| |||||||||||||||||    
T  12487772 atagttcacacttaaataagcaaaaatcatcaaaacagcct---atcaccaacaactatgaattttaagcacataacaca 12487848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 469 - 564
Target Start/End: Complemental strand, 23294626 - 23294533
Alignment:
Q  469 cctttgacccaaattcgttcccaaagcttgtacattagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataacatcaatt 564  Q
    |||||||||||||||||| |||||| |||||  ||||||| ||||||||||||||||||| |||| |||||| |||||||||||||||||||||||    
T  23294626 cctttgacccaaattcgtccccaaa-cttgtttattagttaatatacatcaaaagataataaaaa-aacaacaaacatggaatcataacatcaatt 23294533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 219 - 321
Target Start/End: Complemental strand, 23089990 - 23089888
Alignment:
Q  219 gtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcattcacattctatc 318  Q
    ||||||||| |||||||| ||||| | ||||  ||| | ||||| || ||||||||||||||||||||| ||| ||||||||||||||||  ||||||||    
T  23089990 gtttcacaaccacattttgcataagaaacggacaactaaccacatcatgacattcatcatattaaacacccaaccatcattgattcattcttattctatc 23089891  T
Q  319 ata 321  Q
    |||    
T  23089890 ata 23089888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 221 - 301
Target Start/End: Original strand, 17913335 - 17913415
Alignment:
Q  221 ttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattga 301  Q
    |||||||||||||||| ||||||||| ||  ||| | ||||| || ||||||||||||||||||||| |||||||||||||    
T  17913335 ttcacaatcacattttgcataaaagatggacaactaaccacatcatgacattcatcatattaaacacccaatcatcattga 17913415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 196 - 308
Target Start/End: Original strand, 23298617 - 23298729
Alignment:
Q  196 taacactttaaggaaacgttaaagtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcat 295  Q
    |||||| | |||| |||| |||||||||| ||||||||||| ||||||||||||  ||| | ||||| || | |||||||  |||| || ||||||||||    
T  23298617 taacacatgaagggaacgataaagtttcaaaatcacattttgcataaaagacggacaactaaccacatcatggcattcattgtatttaatactcaatcat 23298716  T
Q  296 cattgattcattc 308  Q
    |||||||||||||    
T  23298717 cattgattcattc 23298729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 219 - 306
Target Start/End: Original strand, 22544814 - 22544901
Alignment:
Q  219 gtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcat 306  Q
    |||||| ||||||||||| ||||||||||||  ||| | ||||| || || |||||||||||| |||||| |||||||||||||||||    
T  22544814 gtttcaaaatcacattttgcataaaagacggacaactaaccacatcatgatattcatcatattcaacactaaatcatcattgattcat 22544901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 12465628 - 12465574
Alignment:
Q  267 gacattcatcatattaaacactcaatcatcattgattcattcacattctatcata 321  Q
    ||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  12465628 gacattcatcatattaaacacccaatcatcattgattcattcttattctatcata 12465574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 460 - 564
Target Start/End: Original strand, 12487496 - 12487600
Alignment:
Q  460 ttttaatcccctttgacccaaattcgttcccaaagcttgtacattagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataacat 559  Q
    |||| ||||||||||||||||||| || ||| || |||||  |||||||   ||| |||||||   ||| ||||||||||| ||||||||||||||||||    
T  12487496 ttttgatcccctttgacccaaatttgtcccccaaacttgtttattagttatcatatatcaaaatgcaatgaaaacaacaacaaacatggaatcataacat 12487595  T
Q  560 caatt 564  Q
    |||||    
T  12487596 caatt 12487600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 9520707 - 9520761
Alignment:
Q  267 gacattcatcatattaaacactcaatcatcattgattcattcacattctatcata 321  Q
    ||||||||||| ||||||||| ||||||||||||||||||||  |||||||||||    
T  9520707 gacattcatcaaattaaacacccaatcatcattgattcattcttattctatcata 9520761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 267 - 340
Target Start/End: Original strand, 12486768 - 12486841
Alignment:
Q  267 gacattcatcatattaaacactcaatcatcattgattcattcacattctatcatactaacatgaattcaaagcc 340  Q
    ||||||||||||||||||||| | ||||||||||||||||||  ||||||| |||  | ||||||| |||||||    
T  12486768 gacattcatcatattaaacaccccatcatcattgattcattcttattctataatatcatcatgaatacaaagcc 12486841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 636 - 677
Target Start/End: Original strand, 23349707 - 23349748
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacat 677  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  23349707 caaacaaccacaccaattcaaaccccaacaacatacaaacat 23349748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 690 - 770
Target Start/End: Original strand, 23350242 - 23350322
Alignment:
Q  690 atgaagtgaatttaaacatgtttcaacaacaatcactcaccaattcacgatttacactcaaataaacaaaaatcatcaaaa 770  Q
    ||||||||||||| ||||||||||||||| ||||||||| || |||| | |  |||||  ||||| |||||||||||||||    
T  23350242 atgaagtgaatttgaacatgtttcaacaataatcactcatcatttcatgttacacacttgaataagcaaaaatcatcaaaa 23350322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 276 - 338
Target Start/End: Complemental strand, 19991347 - 19991285
Alignment:
Q  276 catattaaacactcaatcatcattgattcattcacattctatcatactaacatgaattcaaag 338  Q
    ||||||| |||||||||||||||  |||||||| ||||||||||||  |||| ||||||||||    
T  19991347 catattagacactcaatcatcatcaattcattctcattctatcatataaacacgaattcaaag 19991285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 476 - 564
Target Start/End: Original strand, 16896462 - 16896551
Alignment:
Q  476 cccaaattcgttcccaaagcttgtacattagtttatatacatcaaaagataatcaaaacaacaac-caacatggaatcataacatcaatt 564  Q
    |||||||||| || |||| |||||||| ||||||||| ||||||||||| | |||||| ||||||  |||||  ||| ||||||||||||    
T  16896462 cccaaattcgatctcaaaacttgtacactagtttataaacatcaaaagacattcaaaataacaacaaaacatcaaattataacatcaatt 16896551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 409 - 564
Target Start/End: Original strand, 23299354 - 23299509
Alignment:
Q  409 tcttggttgttccctctcgagaactctccaattttcacca-aaaatccttgtttttaatcccctttgacccaaattcgttcccaaagcttgtacattagt 507  Q
    |||||| | ||||||||||||||| |  || ||||||||  |||||||  |||||| ||||||||||| | ||||| || ||| || | |||  ||||||    
T  23299354 tcttgggttttccctctcgagaacccatcacttttcaccccaaaatccc-gtttttgatcccctttgatctaaatttgtcccccaaacatgtttattagt 23299452  T
Q  508 ttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataacatcaatt 564  Q
    | | |||||| ||||   ||||||||||| ||| |||||||||||||| ||||||||    
T  23299453 taaaatacataaaaaagcaatcaaaacaataacaaacatggaatcatagcatcaatt 23299509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 348
Target Start/End: Complemental strand, 19728551 - 19728504
Alignment:
Q  301 attcattcacattctatcatactaacatgaattcaaagcctcatacta 348  Q
    |||||||||||||  |||||| |||||||||||||||| |||||||||    
T  19728551 attcattcacattaaatcataataacatgaattcaaagtctcatacta 19728504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 276 - 337
Target Start/End: Complemental strand, 14486890 - 14486829
Alignment:
Q  276 catattaaacactcaatcatcattgattcattcacattctatcatactaacatgaattcaaa 337  Q
    |||||||||||||||||||||||||||| | ||  |||  ||||||||| ||||||| ||||    
T  14486890 catattaaacactcaatcatcattgattaactcttatttcatcatactatcatgaatacaaa 14486829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 102; Significance: 3e-50; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 637 - 858
Target Start/End: Complemental strand, 7259 - 7038
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    |||||||||||||||||||||||||||||||| | |||||||||| || ||| |||||||||||| ||||||||||||||||||||||  ||| |||||     
T  7259 aaacaaccacaccaattcaaaccccatcaacacataaacataaaccaacattaatgaagtgaattcaaacatgtttcaacaacaatcatacactaattcg 7160  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     || || |||||| |||  |||||||||| ||||  ||| || ||||||||||||||||||||||||||   |||||| |||| ||||||||||||||||    
T  7159 tgaatttcactcagatagtcaaaaatcattaaaacaactcaataacaacaacaactatgaagtttaagctattaacaccacaaattcatgaagtttatca 7060  T
Q  837 tactcacaaattcacttgaatt 858  Q
    ||| ||||  ||||| ||||||    
T  7059 tacccacattttcacatgaatt 7038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 637 - 858
Target Start/End: Complemental strand, 14841 - 14620
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    |||||||||||||||||||||||||||||||| | |||||||||| || ||| |||||||||||| ||||||||||||||||||||||  ||| |||||     
T  14841 aaacaaccacaccaattcaaaccccatcaacacataaacataaaccaacattaatgaagtgaattcaaacatgtttcaacaacaatcatacactaattcg 14742  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     || || |||||| |||  |||||||||| ||||  ||| || ||||||||||||||||||||||||||   |||||| |||| ||||||||||||||||    
T  14741 tgaatttcactcagatagtcaaaaatcattaaaacaactcaataacaacaacaactatgaagtttaagctattaacaccacaaattcatgaagtttatca 14642  T
Q  837 tactcacaaattcacttgaatt 858  Q
    ||| ||||  ||||| ||||||    
T  14641 tacccacattttcacatgaatt 14620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 637 - 858
Target Start/End: Complemental strand, 24793 - 24572
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    |||||||||||||||||||||||||||||||| | |||||||||| || ||| |||||||||||| ||||||||||||||||||||||  ||| |||||     
T  24793 aaacaaccacaccaattcaaaccccatcaacacataaacataaaccaacattaatgaagtgaattcaaacatgtttcaacaacaatcatacactaattcg 24694  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     || || |||||| |||  |||||||||| ||||  ||| || ||||||||||||||||||||||||||   |||||| |||| ||||||||||||||||    
T  24693 tgaatttcactcagatagtcaaaaatcattaaaacaactcaataacaacaacaactatgaagtttaagctattaacaccacaaattcatgaagtttatca 24594  T
Q  837 tactcacaaattcacttgaatt 858  Q
    ||| ||||  ||||| ||||||    
T  24593 tacccacattttcacatgaatt 24572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 95; Significance: 5e-46; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 641 - 811
Target Start/End: Complemental strand, 30429 - 30260
Alignment:
Q  641 aaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattcacgat 740  Q
    |||||||||||||||||||||| |||||||| |||||| | ||  ||| |||||||||||||||||||||| | |||||||||||||| ||||||| |||    
T  30429 aaccacaccaattcaaaccccaacaacataccaacatatataatcatttatgaagtgaatttaaacatgttccgacaacaatcactcatcaattcatgat 30330  T
Q  741 ttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataa 811  Q
    ||||||| |||||| |||||||||||||||  ||||| || |||||||||||||||| |||||||||||||    
T  30329 ttacacttaaataagcaaaaatcatcaaaacaacttatcaccaacaacaactatgaa-tttaagcacataa 30260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 216 - 321
Target Start/End: Complemental strand, 31398 - 31293
Alignment:
Q  216 aaagtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcattcacattct 315  Q
    ||||||||| ||||||||||| ||||| |||| |   || | |||||  | |||||||| ||||||| |||| ||||||||||||||||||||  | |||    
T  31398 aaagtttcaaaatcacattttgcataatagacagaatacgatccacataatgacattcaacatattagacacccaatcatcattgattcattcttactct 31299  T
Q  316 atcata 321  Q
    ||||||    
T  31298 atcata 31293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 5e-46; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 638 - 811
Target Start/End: Original strand, 21695023 - 21695197
Alignment:
Q  638 aacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattcac 737  Q
    |||||||||||||||||||||||||||||||||||| ||   |  || ||| ||||||||||||||||||||||||||||| ||||||||| ||||| |     
T  21695023 aacaaccacaccaattcaaaccccatcaacatacaatcaggtattaacatttatgaagtgaatttaaacatgtttcaacaataatcactcatcaattgat 21695122  T
Q  738 gatttacactcaaataaacaaaaatcatcaaaatc-acttaacaacaacaacaactatgaagtttaagcacataa 811  Q
    |||||||||| ||||||  |||||||||||||| | ||||| |||||||| ||||||||||||||||||||||||    
T  21695123 gatttacacttaaataagtaaaaatcatcaaaaacaacttatcaacaacatcaactatgaagtttaagcacataa 21695197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 637 - 856
Target Start/End: Complemental strand, 18830864 - 18830650
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    |||||||| |||||||||| |||| | ||||||| ||||||||||||| ||  |||||||||||| ||||||||||||||||||||||  || |||||||    
T  18830864 aaacaacctcaccaattcatacccaa-caacatataaacataaacaaacatctatgaagtgaattcaaacatgtttcaacaacaatcatacatcaattca 18830766  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     ||||| || |||||||   ||||||||||||||  |||   ||||||||| |||||||||||||||||   |||||||||| ||||||||||||||| |    
T  18830765 tgattt-cagtcaaatagtaaaaaatcatcaaaacaact---caacaacaataactatgaagtttaagctattaacacaacattttcatgaagtttatta 18830670  T
Q  837 tactcacaaattcacttgaa 856  Q
    ||| || || ||||| ||||    
T  18830669 tacccataatttcacatgaa 18830650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 636 - 839
Target Start/End: Original strand, 25263200 - 25263404
Alignment:
Q  636 caaacaaccacaccaattcaaacccc-atcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaatt 734  Q
    ||||||||||||||| |||||||||| | ||||||||||||||| | ||  ||| |||||||||||||||||||||| |||||| ||||||||| || ||    
T  25263200 caaacaaccacaccacttcaaacccccaacaacatacaaacatatataatcatttatgaagtgaatttaaacatgttccaacaataatcactcatcattt 25263299  T
Q  735 cacgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcaca-taacacaacaatttcatgaagttta 833  Q
     | | |||||||| || ||| ||||||||| |||||  ||||| || ||| |||||||||||| |||||||||| ||||| | ||||| || ||||||||    
T  25263300 aagggtttacacttaattaagcaaaaatcaccaaaacaacttatcaccaataacaactatgaa-tttaagcacattaacatatcaattccaagaagttta 25263398  T
Q  834 tcatac 839  Q
     |||||    
T  25263399 acatac 25263404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 459 - 564
Target Start/End: Original strand, 21694845 - 21694950
Alignment:
Q  459 tttttaatcccctttgacccaaattcgttcccaaagcttgtacattagtttatatacatcaaaagataatcaaaacaacaaccaacatggaatcataaca 558  Q
    ||||| |||||||||||||||||||||| ||  || |||||  ||||||| ||||||||||| ||  ||||||||||||||| |||||||||||||||||    
T  21694845 tttttgatcccctttgacccaaattcgtcccgcaaacttgtttattagttaatatacatcaataggcaatcaaaacaacaacaaacatggaatcataaca 21694944  T
Q  559 tcaatt 564  Q
    ||||||    
T  21694945 tcaatt 21694950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 756 - 839
Target Start/End: Original strand, 24624919 - 24625002
Alignment:
Q  756 caaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatac 839  Q
    |||||||||||||||  ||||| ||||||||||||| ||||| ||||||||||||| ||| |||||| ||||||||||||||||    
T  24624919 caaaaatcatcaaaacaacttatcaacaacaacaaccatgaattttaagcacataatacatcaattttatgaagtttatcatac 24625002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 258 - 340
Target Start/End: Original strand, 17508576 - 17508658
Alignment:
Q  258 ccacaccaagacattcatcatattaaacactcaatcatcattgattcattcacattctatcatactaacatgaattcaaagcc 340  Q
    ||||| || ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||  ||||||| | |||||||    
T  17508576 ccacatcatgacattcatcatattaaacacccaatcatcattgattcattcatattctatcatatcaacatgagtacaaagcc 17508658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 637 - 721
Target Start/End: Complemental strand, 17622496 - 17622412
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaa 721  Q
    |||||||| ||||||||| ||   ||||||||||||||||| |||||  ||| ||| |||||||| |||||||||||||||||||    
T  17622496 aaacaaccccaccaattctaaattcatcaacatacaaacatcaacaatcattaatggagtgaattcaaacatgtttcaacaacaa 17622412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 756 - 856
Target Start/End: Original strand, 18828536 - 18828636
Alignment:
Q  756 caaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatactcacaaattcacttga 855  Q
    ||||||||| |||||   |||| ||||||||||||| |||| ||||||| ||||||  || |||||||||||| |||||||||| ||||| ||||| |||    
T  18828536 caaaaatcaccaaaacatcttatcaacaacaacaaccatgaggtttaagtacataatccatcaatttcatgaaatttatcatacccacaatttcacatga 18828635  T
Q  856 a 856  Q
    |    
T  18828636 a 18828636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 209 - 331
Target Start/End: Original strand, 25262238 - 25262360
Alignment:
Q  209 aaacgttaaagtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcattc 308  Q
    ||||| ||||||||||||||  |||||||| |||||||||   ||  | |||||  || ||||||| ||||||||||| ||| |||||||||||||||||    
T  25262238 aaacgataaagtttcacaatatcattttacgtaaaagacgaacaattatccacattaaaacattcaccatattaaacagtcattcatcattgattcattc 25262337  T
Q  309 acattctatcatactaacatgaa 331  Q
      || |||||||| || ||||||    
T  25262338 ttatcctatcatattaccatgaa 25262360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 276 - 338
Target Start/End: Original strand, 24383502 - 24383564
Alignment:
Q  276 catattaaacactcaatcatcattgattcattcacattctatcatactaacatgaattcaaag 338  Q
    ||||||| ||||  |||||||||  |||||||||||||||||||||  |||||||||||||||    
T  24383502 catattagacacctaatcatcatcaattcattcacattctatcatataaacatgaattcaaag 24383564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114 (Bit Score: 87; Significance: 3e-41; HSPs: 3)
Name: scaffold1114
Description:

Target: scaffold1114; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 636 - 850
Target Start/End: Original strand, 1819 - 2032
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||  | ||| ||| |||||||||||||||||| |||| ||||| || |||||   |||||    
T  1819 caaacaaccaccccaattcaa-cccaatcaacatacaaacatgtataaacatttatgaagtgaatttaaacacgttttaacaataaccactctttaattc 1917  T
Q  736 acgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatc 835  Q
    | | ||  |||| |||||| |||||||||||||||  ||||| ||||||||||||| ||||| | ||||||||||||| |  ||||||||||||||||||    
T  1918 atggttcgcacttaaataagcaaaaatcatcaaaacaacttatcaacaacaacaaccatgaaatctaagcacataacatattaatttcatgaagtttatc 2017  T
Q  836 atactcacaaattca 850  Q
    |||| ||||||||||    
T  2018 atacccacaaattca 2032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 216 - 332
Target Start/End: Original strand, 228 - 343
Alignment:
Q  216 aaagtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcattcacattct 315  Q
    ||||||||| ||||| |||| ||||||| |||||  ||| | ||||| ||| ||||||||||||||||||||  || |||| || |||||| | ||||||    
T  228 aaagtttcaaaatcaaatttcacataaa-gacggacaactatccacatcaaaacattcatcatattaaacaccaaaccatcgtttattcatcctcattct 326  T
Q  316 atcatactaacatgaat 332  Q
    ||||||| | |||||||    
T  327 atcataccatcatgaat 343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 561
Target Start/End: Original strand, 1623 - 1746
Alignment:
Q  438 aattttcaccaaaaatccttgtttttaatcccctttgacccaaattcgttcccaaagcttgtacattagtttatatacatcaaaagataatcaaaacaac 537  Q
    |||||||||  |||| || || |||| |||||||||||||   |||||| ||| || |||||  ||||| | | ||||||||||||  ||||||| ||||    
T  1623 aattttcactcaaaaaccctgattttgatcccctttgacctgtattcgtcccccaaacttgtttattaggtaacatacatcaaaaggaaatcaaatcaac 1722  T
Q  538 aaccaacatggaatcataacatca 561  Q
    ||| | || |||||||||||||||    
T  1723 aacaagcaaggaatcataacatca 1746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 637 - 858
Target Start/End: Original strand, 154921 - 155141
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    |||||| |||||| ||| ||||| ||| |||||||||||||  | ||| ||| ||||||||||||||||||||||||||| | ||||||||| |||||||    
T  154921 aaacaatcacaccgatttaaacctcattaacatacaaacatgtataaacatttatgaagtgaatttaaacatgtttcaaccataatcactcatcaattca 155020  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     | || |||||  ||| | |||||||||||||||  ||||| |||||||||||| | || | |||||| |||||||  | ||||||||||||||||| ||    
T  155021 tggttcacacttgaatgagcaaaaatcatcaaaacaacttatcaacaacaacaattgtgga-tttaaggacataacttatcaatttcatgaagtttaaca 155119  T
Q  837 tactcacaaattcacttgaatt 858  Q
    ||| || ||||| || ||||||    
T  155120 tacccataaattgacatgaatt 155141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 72; Significance: 3e-32; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 644 - 838
Target Start/End: Original strand, 3548 - 3742
Alignment:
Q  644 cacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattcacgattta 743  Q
    ||||||||||||||||||| |||||||||| |||| | ||  ||| ||||||||||||| |||||||| |||||| ||||||||| ||||||| |  |||    
T  3548 cacaccaattcaaaccccaacaacatacaagcatatataatcatttatgaagtgaatttgaacatgttccaacaataatcactcatcaattcatggatta 3647  T
Q  744 cactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacat-aacacaacaatttcatgaagtttatcata 838  Q
    |||| || | ||||||||||| |||||  ||||| || |||||||||||||||| || || || || |||||| ||||||||||||||||| ||||    
T  3648 cacttaattgaacaaaaatcaccaaaacaacttatcaccaacaacaactatgaacttgaa-catataaacacatcaatttcatgaagtttaacata 3742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 205 - 308
Target Start/End: Original strand, 2585 - 2688
Alignment:
Q  205 aaggaaacgttaaagtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattc 304  Q
    ||||||||  ||||||||||| ||||||||| |||||||| |||   | | | ||||| || |||||||||||||||||||||  |||||||||||||||    
T  2585 aaggaaacaataaagtttcacgatcacatttcacataaaatacgaacatctaaccacatcatgacattcatcatattaaacaccaaatcatcattgattc 2684  T
Q  305 attc 308  Q
    ||||    
T  2685 attc 2688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 67; Significance: 3e-29; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 637 - 839
Target Start/End: Original strand, 3151 - 3344
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    ||||||||||||||| ||||| |||||||||| | ||||||||| ||| ||| |||||||||||| ||| |||||||||||| |||||  || |||||||    
T  3151 aaacaaccacaccaactcaaaacccatcaacacataaacataaataaacattaatgaagtgaattcaaatatgtttcaacaagaatcatacatcaattca 3250  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatca 836  Q
     || || ||||||||||  |||||||||| ||||  ||||         |||||||||||||||||||    ||||||||||| ||||||||||||||||    
T  3251 tgaatttcactcaaatagtcaaaaatcatgaaaacaactt---------aacaactatgaagtttaagatattaacacaacaaattcatgaagtttatca 3341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 637 - 770
Target Start/End: Original strand, 2452 - 2585
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    |||||||||||||||||||||  ||||||||||| ||||||||| | | ||| |||||||||||| ||||||||||||||| ||||||  || |||||||    
T  2452 aaacaaccacaccaattcaaaatccatcaacatataaacataaatagacattaatgaagtgaattcaaacatgtttcaacaccaatcatacaacaattca 2551  T
Q  737 cgatttacactcaaataaacaaaaatcatcaaaa 770  Q
     || || ||||||||||  |||||||||| ||||    
T  2552 tgaatttcactcaaatagtcaaaaatcatgaaaa 2585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 756 - 858
Target Start/End: Complemental strand, 371429 - 371327
Alignment:
Q  756 caaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatactcacaaattcacttga 855  Q
    |||||||||||||||  ||||| ||||||||| ||| ||||  ||||||||||||||||| ||||||||||||||||||||||| |  |||||||| |||    
T  371429 caaaaatcatcaaaacaacttatcaacaacaataaccatgagttttaagcacataacacatcaatttcatgaagtttatcatacccttaaattcacatga 371330  T
Q  856 att 858  Q
    |||    
T  371329 att 371327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 690 - 811
Target Start/End: Original strand, 51804 - 51924
Alignment:
Q  690 atgaagtgaatttaaacatgtttcaacaacaatcactcaccaattcacgatttacactcaaataaacaaaaatcatcaaaatcacttaacaacaacaaca 789  Q
    |||||||||| |||||| |||| |||||| ||||||||| ||||||| | |||||||| || ||| |||||||||||||||  ||||| ||  |||||||    
T  51804 atgaagtgaaattaaacttgttccaacaataatcactcatcaattcatggtttacacttaattaagcaaaaatcatcaaaacaacttatcacaaacaaca 51903  T
Q  790 actatgaagtttaagcacataa 811  Q
    ||||||||  ||||||||||||    
T  51904 actatgaa-attaagcacataa 51924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 215 - 306
Target Start/End: Complemental strand, 1242 - 1151
Alignment:
Q  215 taaagtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcat 306  Q
    |||||||||||||||||||||||| ||||||||||| ||| | ||||| || |||||| ||||||||| | ||  |||||||||||||||||    
T  1242 taaagtttcacaatcacattttacttaaaagacgggcaactatccacatcatgacattaatcatattagatacctaatcatcattgattcat 1151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 756 - 858
Target Start/End: Original strand, 18873 - 18975
Alignment:
Q  756 caaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatactcacaaattcacttga 855  Q
    ||||||||||||||   ||||| ||||||||||||| ||||  ||||||| ||||| |||||||||| |||||||||||||||| |  |||||||| |||    
T  18873 caaaaatcatcaaaccaacttatcaacaacaacaaccatgagttttaagcccataatacaacaattttatgaagtttatcatacccttaaattcacctga 18972  T
Q  856 att 858  Q
    |||    
T  18973 att 18975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 637 - 770
Target Start/End: Original strand, 10066 - 10204
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgt-----ttcaacaacaatcactcacca 731  Q
    ||||||| |||||||||||||  ||||||||||| ||||||||| ||| ||| |||||||||||| ||||||||     || |||||||||||  |||||    
T  10066 aaacaactacaccaattcaaaatccatcaacatataaacataaataaacattaatgaagtgaattcaaacatgtttaagtttaacaacaatcatacacca 10165  T
Q  732 attcacgatttacactcaaataaacaaaaatcatcaaaa 770  Q
    ||||| || || ||||||||||  ||||| |||| ||||    
T  10166 attcatgaatttcactcaaatagtcaaaattcatgaaaa 10204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 216 - 321
Target Start/End: Complemental strand, 20114 - 20009
Alignment:
Q  216 aaagtttcacaatcacattttacataaaagacggggaacaacccacaccaagacattcatcatattaaacactcaatcatcattgattcattcacattct 315  Q
    ||||||||| ||||||||||| ||||||||| ||  | | | ||||| || |||||||| |||||||||||| |||||||| |||||||||||  |||||    
T  20114 aaagtttcaaaatcacattttgcataaaagatggacatctaaccacatcatgacattcaacatattaaacacccaatcatctttgattcattcttattct 20015  T
Q  316 atcata 321  Q
    ||||||    
T  20014 atcata 20009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 787 - 858
Target Start/End: Original strand, 10620 - 10691
Alignment:
Q  787 acaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatactcacaaattcacttgaatt 858  Q
    ||||||||||| |||||| ||||||||  |||||||||||||| ||||||||| || |||||||||||||||    
T  10620 acaactatgaaatttaagaacataacatcacaatttcatgaagattatcatacccataaattcacttgaatt 10691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 636 - 735
Target Start/End: Original strand, 5330 - 5428
Alignment:
Q  636 caaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaatcactcaccaattc 735  Q
    ||||||| |||||||||| || | | || |||||| ||| ||||| ||| ||| |||||||||||||||| |||| ||||||| ||||||||| ||||||    
T  5330 caaacaatcacaccaatttaatctc-atgaacatataaatataaataaacatttatgaagtgaatttaaatatgtgtcaacaataatcactcatcaattc 5428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 756 - 858
Target Start/End: Complemental strand, 1167 - 1065
Alignment:
Q  756 caaaaatcatcaaaatcacttaacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatactcacaaattcacttga 855  Q
    |||||||||| ||||  ||||| ||||||||||||| ||||  |||||||||||||||||  |||||||| || |||||| ||| || |||||||| |||    
T  1167 caaaaatcattaaaacaacttatcaacaacaacaaccatgatttttaagcacataacacattaatttcataaattttatcgtacccataaattcacatga 1068  T
Q  856 att 858  Q
    |||    
T  1067 att 1065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 270 - 338
Target Start/End: Complemental strand, 48479 - 48411
Alignment:
Q  270 attcatcatattaaacactcaatcatcattgattcattcacattctatcatactaacatgaattcaaag 338  Q
    |||||||||||||||||| ||||||||||  ||||||| |||||||||| || | ||||||||||||||    
T  48479 attcatcatattaaacacccaatcatcatcaattcatttacattctatcgtattcacatgaattcaaag 48411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2087 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold2087
Description:

Target: scaffold2087; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 637 - 722
Target Start/End: Original strand, 117 - 202
Alignment:
Q  637 aaacaaccacaccaattcaaaccccatcaacatacaaacataaacaaatattcatgaagtgaatttaaacatgtttcaacaacaat 722  Q
    |||||| |||| ||||||||| ||||||||||||  |||||  | ||| ||  |||||||||||| ||||||||||||||||||||    
T  117 aaacaatcacaacaattcaaagcccatcaacataacaacatgtataaaaatatatgaagtgaattcaaacatgtttcaacaacaat 202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0964 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0964
Description:

Target: scaffold0964; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 777 - 845
Target Start/End: Original strand, 2231 - 2299
Alignment:
Q  777 aacaacaacaacaactatgaagtttaagcacataacacaacaatttcatgaagtttatcatactcacaa 845  Q
    ||||||||||||| ||||||  ||||| |||| |||||| |||||| ||||||||||||| || |||||    
T  2231 aacaacaacaacatctatgagttttaaccacacaacacatcaattttatgaagtttatcacacccacaa 2299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 693 - 736
Target Start/End: Complemental strand, 106093 - 106050
Alignment:
Q  693 aagtgaatttaaacatgtttcaacaacaatcactcaccaattca 736  Q
    ||||||||||| |||||||| |||||||||||||||| ||||||    
T  106093 aagtgaatttagacatgtttgaacaacaatcactcacaaattca 106050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 270 - 321
Target Start/End: Complemental strand, 100690 - 100639
Alignment:
Q  270 attcatcatattaaacactcaatcatcattgattcattcacattctatcata 321  Q
    ||||||||| |||||||| ||| ||||||||||||||||  |||||||||||    
T  100690 attcatcatgttaaacacccaaccatcattgattcattcttattctatcata 100639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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