View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0913_low_28 (Length: 399)

Name: NF0913_low_28
Description: NF0913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0913_low_28
NF0913_low_28
[»] chr4 (39 HSPs)
chr4 (207-391)||(25930688-25930875)
chr4 (211-391)||(36382346-36382528)
chr4 (207-391)||(20129290-20129477)
chr4 (205-388)||(29319708-29319894)
chr4 (206-391)||(34407284-34407472)
chr4 (207-391)||(26439279-26439466)
chr4 (210-388)||(40528996-40529179)
chr4 (205-391)||(17511233-17511422)
chr4 (204-391)||(43355881-43356071)
chr4 (207-391)||(13012168-13012355)
chr4 (207-391)||(43143584-43143771)
chr4 (207-391)||(47500753-47500940)
chr4 (227-391)||(30216742-30216909)
chr4 (230-391)||(3292896-3293060)
chr4 (210-391)||(6235515-6235687)
chr4 (227-391)||(6690235-6690402)
chr4 (210-389)||(50205079-50205261)
chr4 (236-391)||(48989337-48989495)
chr4 (236-379)||(42333788-42333934)
chr4 (210-391)||(10352884-10353068)
chr4 (239-391)||(29995983-29996138)
chr4 (244-391)||(44156668-44156818)
chr4 (251-391)||(35545977-35546120)
chr4 (236-391)||(30077631-30077789)
chr4 (238-391)||(28877250-28877406)
chr4 (239-324)||(48129978-48130063)
chr4 (246-337)||(26448072-26448162)
chr4 (210-312)||(27363344-27363446)
chr4 (229-323)||(30109958-30110052)
chr4 (244-327)||(45194193-45194276)
chr4 (262-391)||(1817752-1817884)
chr4 (252-320)||(6254569-6254637)
chr4 (207-268)||(7769308-7769369)
chr4 (305-379)||(13392893-13392970)
chr4 (305-379)||(13396032-13396109)
chr4 (227-264)||(49908782-49908819)
chr4 (357-391)||(30110108-30110142)
chr4 (357-391)||(48130111-48130145)
chr4 (227-264)||(5517494-5517531)
[»] chr7 (21 HSPs)
chr7 (207-388)||(5555467-5555651)
chr7 (207-388)||(3114099-3114283)
chr7 (211-391)||(8394109-8394292)
chr7 (211-391)||(36630800-36630983)
chr7 (207-389)||(14777109-14777294)
chr7 (227-391)||(34389056-34389223)
chr7 (227-391)||(37002144-37002311)
chr7 (236-391)||(35090177-35090335)
chr7 (227-389)||(8867733-8867898)
chr7 (227-391)||(33685564-33685731)
chr7 (246-391)||(40920003-40920151)
chr7 (236-391)||(43184468-43184626)
chr7 (231-391)||(26624749-26624913)
chr7 (250-390)||(38638237-38638380)
chr7 (245-391)||(36658199-36658348)
chr7 (227-391)||(7002725-7002892)
chr7 (227-391)||(7048596-7048763)
chr7 (286-345)||(10868522-10868583)
chr7 (214-302)||(26502797-26502885)
chr7 (214-302)||(26589829-26589917)
chr7 (240-272)||(10876829-10876861)
[»] chr5 (24 HSPs)
chr5 (210-388)||(10033910-10034091)
chr5 (210-391)||(13817960-13818144)
chr5 (207-391)||(39434676-39434863)
chr5 (207-391)||(36293621-36293808)
chr5 (211-390)||(1776377-1776559)
chr5 (207-388)||(39657509-39657693)
chr5 (207-391)||(26283318-26283505)
chr5 (207-375)||(3155647-3155818)
chr5 (245-391)||(16155015-16155164)
chr5 (227-391)||(17332551-17332718)
chr5 (227-391)||(31680367-31680534)
chr5 (241-391)||(33430335-33430488)
chr5 (206-391)||(37254620-37254808)
chr5 (227-391)||(12278860-12279027)
chr5 (257-388)||(16333879-16334013)
chr5 (214-391)||(19985926-19986106)
chr5 (227-391)||(31501716-31501883)
chr5 (246-391)||(43068896-43069044)
chr5 (236-391)||(36291380-36291538)
chr5 (240-324)||(28801300-28801384)
chr5 (7-65)||(15381751-15381809)
chr5 (210-263)||(14316641-14316694)
chr5 (229-312)||(202641-202724)
chr5 (203-234)||(16334018-16334049)
[»] chr2 (23 HSPs)
chr2 (207-388)||(42439966-42440150)
chr2 (207-391)||(41251634-41251821)
chr2 (207-388)||(32127144-32127328)
chr2 (203-388)||(35962691-35962879)
chr2 (207-388)||(16405580-16405764)
chr2 (207-391)||(17445041-17445226)
chr2 (211-391)||(31581622-31581805)
chr2 (207-388)||(18981597-18981780)
chr2 (207-391)||(6403804-6403991)
chr2 (207-342)||(2958153-2958287)
chr2 (227-391)||(45418583-45418750)
chr2 (227-391)||(44084603-44084770)
chr2 (236-390)||(771008-771165)
chr2 (227-390)||(8147351-8147518)
chr2 (245-391)||(12756837-12756986)
chr2 (229-388)||(8059336-8059498)
chr2 (210-388)||(2285845-2286026)
chr2 (246-337)||(26162756-26162847)
chr2 (227-335)||(26237957-26238065)
chr2 (236-302)||(7072644-7072710)
chr2 (251-342)||(4555261-4555354)
chr2 (247-302)||(34905969-34906024)
chr2 (357-391)||(4555192-4555226)
[»] chr6 (12 HSPs)
chr6 (206-388)||(34948761-34948946)
chr6 (207-388)||(13837801-13837985)
chr6 (207-391)||(398597-398784)
chr6 (227-391)||(28996730-28996897)
chr6 (227-391)||(18339106-18339273)
chr6 (243-391)||(33229336-33229487)
chr6 (236-391)||(29743292-29743450)
chr6 (227-323)||(31028435-31028531)
chr6 (242-312)||(24697899-24697969)
chr6 (242-302)||(3050094-3050154)
chr6 (227-263)||(13647017-13647053)
chr6 (278-312)||(24695538-24695572)
[»] chr8 (17 HSPs)
chr8 (210-391)||(29728386-29728570)
chr8 (210-391)||(3648794-3648978)
chr8 (211-388)||(15838270-15838449)
chr8 (231-391)||(16788025-16788188)
chr8 (207-391)||(34136825-34137012)
chr8 (227-391)||(4404008-4404175)
chr8 (227-391)||(23402108-23402275)
chr8 (207-391)||(39914495-39914681)
chr8 (227-391)||(36408551-36408718)
chr8 (243-337)||(3435285-3435381)
chr8 (249-378)||(9877242-9877374)
chr8 (227-391)||(2729196-2729363)
chr8 (259-391)||(42230971-42231104)
chr8 (250-320)||(40470567-40470637)
chr8 (242-312)||(10397122-10397192)
chr8 (357-391)||(40470475-40470509)
chr8 (227-263)||(34844763-34844799)
[»] chr3 (20 HSPs)
chr3 (211-391)||(34084122-34084305)
chr3 (207-390)||(6269427-6269613)
chr3 (204-391)||(22968444-22968634)
chr3 (207-391)||(19390126-19390313)
chr3 (207-391)||(39771770-39771957)
chr3 (226-391)||(27935177-27935345)
chr3 (207-391)||(11018212-11018399)
chr3 (227-391)||(45182981-45183148)
chr3 (210-391)||(40081741-40081922)
chr3 (227-391)||(6930894-6931061)
chr3 (206-391)||(6503569-6503757)
chr3 (227-391)||(33040953-33041120)
chr3 (227-375)||(19565517-19565668)
chr3 (227-391)||(45335875-45336041)
chr3 (227-391)||(35514266-35514429)
chr3 (211-284)||(22922141-22922214)
chr3 (249-323)||(5135291-5135365)
chr3 (351-391)||(22922222-22922262)
chr3 (357-391)||(5135421-5135455)
chr3 (227-264)||(6890998-6891035)
[»] chr1 (14 HSPs)
chr1 (205-391)||(42310941-42311130)
chr1 (207-388)||(7433425-7433609)
chr1 (206-391)||(26144234-26144422)
chr1 (214-391)||(32982056-32982236)
chr1 (239-391)||(3828996-3829150)
chr1 (206-391)||(35907531-35907719)
chr1 (238-390)||(17445324-17445479)
chr1 (236-391)||(321377-321535)
chr1 (207-333)||(23313218-23313345)
chr1 (210-323)||(41972346-41972458)
chr1 (227-342)||(33489687-33489804)
chr1 (357-391)||(33489839-33489873)
chr1 (357-391)||(41972256-41972290)
chr1 (227-263)||(44352614-44352650)
[»] scaffold0069 (1 HSPs)
scaffold0069 (207-391)||(17822-18009)
[»] scaffold0592 (1 HSPs)
scaffold0592 (68-206)||(2383-2521)
[»] scaffold0002 (1 HSPs)
scaffold0002 (206-391)||(480457-480645)
[»] scaffold2142 (1 HSPs)
scaffold2142 (207-391)||(502-689)
[»] scaffold0502 (1 HSPs)
scaffold0502 (227-391)||(5230-5397)
[»] scaffold0041 (1 HSPs)
scaffold0041 (246-391)||(52944-53092)
[»] scaffold0154 (1 HSPs)
scaffold0154 (239-391)||(31492-31647)


Alignment Details
Target: chr4 (Bit Score: 150; Significance: 3e-79; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 207 - 391
Target Start/End: Original strand, 25930688 - 25930875
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  25930688 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacattta 25930787  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||||||||||||||||||||| ||||||||||||| || |||   |||||||||||||||||| |||||||||||||||||||||||    
T  25930788 caaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 25930875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 211 - 391
Target Start/End: Complemental strand, 36382528 - 36382346
Alignment:
Q  211 ggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaa 310  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| |||||||||||||||| ||    
T  36382528 ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttac-aa 36382430  T
Q  311 aagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||||| |||||||||||||||||| || |||   |||||||||||||||||| |||||||||||||||||||||||    
T  36382429 aagaaaaatttggacaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 36382346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 207 - 391
Target Start/End: Original strand, 20129290 - 20129477
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||| ||||| | ||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  20129290 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 20129389  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||||||||||||||||||||||||||||||||||| || |||   ||||| |||||||||||  |||||||||||| | ||||||||    
T  20129390 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttagaattttatttggcacactattgacagtttcatctc 20129477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 205 - 388
Target Start/End: Complemental strand, 29319894 - 29319708
Alignment:
Q  205 agcatgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatt 304  Q
    |||||||||||||||||||||||| |||||  |||||||| || ||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||    
T  29319894 agcatgggcggttctaccgtatggtgacccctggcggtcgtccaggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacatt 29319795  T
Q  305 tacaaaaagaaaaatttgggcaatctgaaaattgtcacgc---gaaaagtcttggaattttatttaccacactattgacgggttcat 388  Q
    |||||||||||||||||| ||||||||||||||||||| |    | |||||||||||||||||||| ||||||||||||||||||||    
T  29319794 tacaaaaagaaaaatttgagcaatctgaaaattgtcacacacaaataagtcttggaattttatttagcacactattgacgggttcat 29319708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 206 - 391
Target Start/End: Complemental strand, 34407472 - 34407284
Alignment:
Q  206 gcatgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattt 305  Q
    ||||||||||||| ||||| | ||||||| ||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  34407472 gcatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattt 34407373  T
Q  306 acaaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    | ||||||||||||||||||||||||||||||||||| || |||   |||||| ||||||||||  |||||||||||| | ||||||||    
T  34407372 ataaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 34407284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 207 - 391
Target Start/End: Complemental strand, 26439466 - 26439279
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||| ||||| | ||||||| ||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  26439466 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 26439367  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
     ||||||||||||||||||||||||||||||||||| || |||   |||||| ||||||||||  |||||||||||| | ||||||||    
T  26439366 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 26439279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 210 - 388
Target Start/End: Original strand, 40528996 - 40529179
Alignment:
Q  210 gggcggttctaccgtatggcgaccctgggcg--gtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttac 307  Q
    |||||||||||||||||||||||||||||||  |||| |||| |||||||||||||||||||||||| ||||||||| |||| | |||||||||||||||    
T  40528996 gggcggttctaccgtatggcgaccctgggcgaggtcgtccggactcgatcgataatttttgcacattaaactcaacctaaaaactcattaacacatttac 40529095  T
Q  308 aaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcat 388  Q
    |||||||||||||||| |||| |||||||||||||  | |||   |||||||||||||||||| ||||||||||||||||||||    
T  40529096 aaaaagaaaaatttggacaatttgaaaattgtcacatgcaaataggtcttggaattttatttagcacactattgacgggttcat 40529179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 205 - 391
Target Start/End: Complemental strand, 17511422 - 17511233
Alignment:
Q  205 agcatgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatt 304  Q
    |||| |||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  17511422 agcaggggcggttctaccgtatggcgaccctgg-cggtcgcccagactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatt 17511324  T
Q  305 tacaaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttgg-aattttatttaccacactattgacgggttcatctc 391  Q
    |||||||||||||||||||||||| |||||||||| || || |||   ||||||| ||||||||||| |||| ||||||  ||||||||||    
T  17511323 tacaaaaagaaaaatttgggcaatttgaaaattgttacacgcaaataggtcttggaaattttatttagcacattattgatcggttcatctc 17511233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 204 - 391
Target Start/End: Original strand, 43355881 - 43356071
Alignment:
Q  204 aagcatgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacat 303  Q
    ||||||||||||||| ||||| | |||||||  ||| |||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||    
T  43355881 aagcatgggcggttccaccgtgtagcgaccccaggcagtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacat 43355980  T
Q  304 ttacaaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||| ||||||||||||||||||||||||||||||||||| || |||   |||||| ||||||||||  |||||||||||| | ||||||||    
T  43355981 ttataaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 43356071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 207 - 391
Target Start/End: Original strand, 13012168 - 13012355
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||| ||||| | ||||||| |||||||||||||||||||||||||||||||||||||||  | |||||| |||||| ||||||||||||||    
T  13012168 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacattta 13012267  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
     ||||||||||||||||||||| ||||||||||||| || |||   |||||||||||||||||  |||||||||||| | ||||||||    
T  13012268 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 13012355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 207 - 391
Target Start/End: Complemental strand, 43143771 - 43143584
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||  |||||  | |||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| |||    
T  43143771 catgggcggtttcaccgtccgacgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 43143672  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||||||||||||||||||||||| |||| || |||   |||| ||||||||||||| ||||| ||||| |||||||||||    
T  43143671 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 43143584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 207 - 391
Target Start/End: Original strand, 47500753 - 47500940
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||| ||||| | ||||||| |||||||||||||||||||||||||||||||||||||||  |||||||| |||||| ||||||||||||||    
T  47500753 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 47500852  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
      |||||||||||||||||||| ||||||||||||| || |||   |||||||||||||||||  |||||||||||| | ||||||||    
T  47500853 tgaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 47500940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 30216909 - 30216742
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||  ||||||||| |||||||||||||||||||||||    
T  30216909 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggca 30216810  T
Q  327 atctgaaaattgtcac--gcgaaaag-tcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| ||||  || || || ||| ||||||||||||| |||||||||||||||||||||||    
T  30216809 atctgaaaattctcacatgcaaatagatctcggaattttatttagcacactattgacgggttcatctc 30216742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 230 - 391
Target Start/End: Complemental strand, 3293060 - 3292896
Alignment:
Q  230 gaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 329  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||  || ||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  3293060 gaccccgggcggtcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatc 3292961  T
Q  330 tgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||||||| |||| || |||   |||| ||||||||||||| ||||||||||||| |||||||||    
T  3292960 tgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 3292896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 210 - 391
Target Start/End: Original strand, 6235515 - 6235687
Alignment:
Q  210 gggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaa 309  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||| |||||||||||||||            ||||||| ||||||||||||||||||    
T  6235515 gggcggttctaccgtatggcgattctgggcggtcgctcgggctcgaccgataatttttgcac------------ccaaaagtccattaacacatttacaa 6235602  T
Q  310 aaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||||||||||| ||||||||||||| || |||   |||||||||||||||||| |||||||||||||||||||||||    
T  6235603 aaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 6235687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 6690402 - 6690235
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||  || ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  6690402 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 6690303  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    | ||||||||| |||| || |||   |||| | ||||||||||| |||||||||||||||||| ||||    
T  6690302 aactgaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgacgggttcgtctc 6690235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 210 - 389
Target Start/End: Complemental strand, 50205261 - 50205079
Alignment:
Q  210 gggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaa 309  Q
    ||||||||  |||||  ||||| || ||||||||||||| |||||||||||||||||||||||||  |  ||||||||||||| ||||||||| ||||||    
T  50205261 gggcggtttcaccgtccggcgatcccgggcggtcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacacttacaa 50205162  T
Q  310 aaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatc 389  Q
    ||||||||| |||| ||||||||||||| |||| || |||   |||||||||||||||||| |||||||||||||||||||||    
T  50205161 aaagaaaaaattggacaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatc 50205079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 236 - 391
Target Start/End: Original strand, 48989337 - 48989495
Alignment:
Q  236 gggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 335  Q
    ||||||||  ||||| ||||||||||||||||||||||| ||| |||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  48989337 gggcggtcaaccgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaaaaagaaaaatttgggcaatctgaaaa 48989436  T
Q  336 ttgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    || |||  || |||   |||| ||||||||||||| |||||||||||||||||||||||    
T  48989437 ttctcatacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 48989495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 236 - 379
Target Start/End: Complemental strand, 42333934 - 42333788
Alignment:
Q  236 gggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 335  Q
    ||||||||| |||||||| ||||||||||||||||||||  |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  42333934 gggcggtcgtccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaa 42333835  T
Q  336 ttgtcacgcgaaaa---gtcttggaattttatttaccacactattga 379  Q
    || |||| || |||   |||| ||||||||||||| ||||| |||||    
T  42333834 ttctcacacgcaaataggtctcggaattttatttagcacacaattga 42333788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 210 - 391
Target Start/End: Complemental strand, 10353068 - 10352884
Alignment:
Q  210 gggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaa 309  Q
    ||||||||  |||||  ||||||||  ||||||||||||||||| ||||||||||||||||||||  || ||||| ||||| ||||||||||||||||||    
T  10353068 gggcggtttcaccgtccggcgacccctggcggtcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacatttacaa 10352969  T
Q  310 aaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    || ||||||||||||||||||||||||| | || || |||   |||| ||||||||||||| ||||| | || ||| ||||||||    
T  10352968 aaggaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacaccagtgtcggattcatctc 10352884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 239 - 391
Target Start/End: Complemental strand, 29996138 - 29995983
Alignment:
Q  239 cggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattg 338  Q
    |||||| |||| |||||||||||||||||| |||||  |||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||     
T  29996138 cggtcgtccggactcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacgaaaagaaaaatttgggcaatctgaaaattc 29996039  T
Q  339 t--cacgcgaaaag-tcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |  ||||| || || ||| ||||||||||| | |||||||||||||| ||||||||    
T  29996038 ttgcacgcaaatagttctcggaattttattaagcacactattgacggattcatctc 29995983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 244 - 391
Target Start/End: Original strand, 44156668 - 44156818
Alignment:
Q  244 gcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacg 343  Q
    |||||||||| | ||||||||||||||||||  || ||||||||||||| ||||||||| |||||||||||||| ||||| ||||||||||||| || |     
T  44156668 gcccgggctcaaccgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaattttggacaatctgaaaattctctca 44156767  T
Q  344 cgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    || |||   |||| ||||||||||||| |||||||||||||||||||||||    
T  44156768 cgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 44156818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 251 - 391
Target Start/End: Original strand, 35545977 - 35546120
Alignment:
Q  251 ctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa- 349  Q
    ||||||||| ||||||||| |||   || ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| |||| || |||     
T  35545977 ctcgatcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacacgcaaat 35546076  T
Q  350 --gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
      ||||  |||||||||||| ||||||||||| |||||||||||    
T  35546077 gggtctctgaattttatttagcacactattgatgggttcatctc 35546120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 236 - 391
Target Start/End: Complemental strand, 30077789 - 30077631
Alignment:
Q  236 gggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 335  Q
    |||||||||||| ||||| |||||||| |||||||||||  || ||||| |||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  30077789 gggcggtcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacatttacaaaaagaaaaatttggacaatctgaaaa 30077690  T
Q  336 ttgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    || | || |  |||   |||||| ||||||||||| ||||||| || ||| ||||||||    
T  30077689 tttttacacacaaataggtcttgaaattttatttagcacactagtgccggattcatctc 30077631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 238 - 391
Target Start/End: Complemental strand, 28877406 - 28877250
Alignment:
Q  238 gcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaatt 337  Q
    ||||||||  ||||| |||||||||||||||||||||  | |||||| ||||||  ||||||||  ||| ||||||||||||||||| ||||| ||||||    
T  28877406 gcggtcgcttgggctagatcgataatttttgcacattagattcaacctaaaagctaattaacacgcttataaaaagaaaaatttgggaaatctaaaaatt 28877307  T
Q  338 gtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
     |||| || |||   |||| ||||||||||||| ||||||||||| |||||||||||    
T  28877306 ctcacacgcaaataggtctcggaattttatttagcacactattgatgggttcatctc 28877250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 48129978 - 48130063
Alignment:
Q  239 cggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttggg 324  Q
    |||||| ||||||||||||||||||||||||| |||  || |||||||||||| |||||||||| |||||||||||||||||||||    
T  48129978 cggtcgaccgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacacttacaaaaagaaaaatttggg 48130063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 246 - 337
Target Start/End: Original strand, 26448072 - 26448162
Alignment:
Q  246 ccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaatt 337  Q
    |||| |||||||||||||||||||||||| ||   |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  26448072 ccggactcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttacaaaaa-aaaaatttgggcaatctgaaaatt 26448162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 210 - 312
Target Start/End: Original strand, 27363344 - 27363446
Alignment:
Q  210 gggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaa 309  Q
    |||||||| |||||||||||||||  ||||||||||||||||||||||||   |||||||| |||   | ||||||||||||||||||||||| ||||||    
T  27363344 gggcggttttaccgtatggcgacctcgggcggtcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacacttacaa 27363443  T
Q  310 aaa 312  Q
    |||    
T  27363444 aaa 27363446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 323
Target Start/End: Original strand, 30109958 - 30110052
Alignment:
Q  229 cgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgg 323  Q
    |||||| || ||||||||||| ||||||||||||||||||||||||  || ||| || |||| ||||||||||| ||||||||||||||||||||    
T  30109958 cgaccccggacggtcgcccggactcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttacaaaaagaaaaatttgg 30110052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 327
Target Start/End: Original strand, 45194193 - 45194276
Alignment:
Q  244 gcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 327  Q
    |||||| ||||||| |||||||||||||||| ||||||||||||||| ||||||||||| ||||||||| ||||  ||||||||    
T  45194193 gcccggactcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttacaaaaaaaaaatattgggcaa 45194276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 262 - 391
Target Start/End: Original strand, 1817752 - 1817884
Alignment:
Q  262 atttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaa 358  Q
    |||||||||||||  |  ||| ||||||| ||||||| ||||||| ||||||||||||||||||||||| |||||| | || || |||   |||| ||||    
T  1817752 atttttgcacattagatccaatccaaaagtccattaatacatttataaaaagaaaaatttgggcaatctaaaaattcttacacgcaaataggtctcggaa 1817851  T
Q  359 ttttatttaccacactattgacgggttcatctc 391  Q
    ||||||||| |||||||||| ||| ||||||||    
T  1817852 ttttatttaacacactattgtcggattcatctc 1817884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 320
Target Start/End: Original strand, 6254569 - 6254637
Alignment:
Q  252 tcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatt 320  Q
    ||||||||||||||||||||||| ||| ||||||||||| | ||||||||| || |||||| |||||||    
T  6254569 tcgatcgataatttttgcacattaaacccaacccaaaagacaattaacacacttgcaaaaaaaaaaatt 6254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 7769308 - 7769369
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttg 268  Q
    |||||||||||  |||||  ||||||||  ||||||||||||||||||||||||||||||||    
T  7769308 catgggcggtttcaccgtccggcgaccccaggcggtcgcccgggctcgatcgataatttttg 7769369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 379
Target Start/End: Complemental strand, 13392970 - 13392893
Alignment:
Q  305 tacaaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattga 379  Q
    |||||||||||||||||||||||||| |||||| |||| || |||   |||| | ||||||||||| |||||||||||    
T  13392970 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13392893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 379
Target Start/End: Complemental strand, 13396109 - 13396032
Alignment:
Q  305 tacaaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattga 379  Q
    |||||||||||||||||||||||||| |||||| |||| || |||   |||| | ||||||||||| |||||||||||    
T  13396109 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13396032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 49908819 - 49908782
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatt 264  Q
    |||||||| |||||||||||||||||||||||||||||    
T  49908819 ggcgaccccgggcggtcgcccgggctcgatcgataatt 49908782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 391
Target Start/End: Original strand, 30110108 - 30110142
Alignment:
Q  357 aattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| |||||||||||||||||||||||    
T  30110108 aattttatttagcacactattgacgggttcatctc 30110142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 391
Target Start/End: Original strand, 48130111 - 48130145
Alignment:
Q  357 aattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| |||||||||||||||||||||||    
T  48130111 aattttatttagcacactattgacgggttcatctc 48130145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 5517531 - 5517494
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatt 264  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  5517531 ggcgaccccgggcggtcgcctgggctcgatcgataatt 5517494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 1e-72; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 207 - 388
Target Start/End: Original strand, 5555467 - 5555651
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  5555467 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcattta 5555566  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcat 388  Q
    |||||||||||||||||||||||||||||||||||| |  |||   |||||||||||||||||| ||||||||||||||||||||    
T  5555567 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 5555651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 207 - 388
Target Start/End: Complemental strand, 3114283 - 3114099
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  3114283 catgggcggttctaccgtatggtgaccccggacggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 3114184  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcat 388  Q
    |||||||||||||||||||||||||||||||||||| |  |||   |||||||||||||||||| ||||||||||||||||||||    
T  3114183 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 3114099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 211 - 391
Target Start/End: Original strand, 8394109 - 8394292
Alignment:
Q  211 ggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaa 310  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  8394109 ggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaa 8394208  T
Q  311 aagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    | |||||||||||||||||||||||||||||| || |||   |||||||||||||||||| ||||||||||||||||| |||||    
T  8394209 aggaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacgggtttatctc 8394292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 211 - 391
Target Start/End: Original strand, 36630800 - 36630983
Alignment:
Q  211 ggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaa 310  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  36630800 ggcggttctaccgtatggcgaccccggacggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaa 36630899  T
Q  311 aagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||||||||||||||||||||||||||||||| || |||   |||||||||||||| ||| |||||||||||||||||||||||    
T  36630900 aagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttagttagcacactattgacgggttcatctc 36630983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 207 - 389
Target Start/End: Complemental strand, 14777294 - 14777109
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||||||||| | |||| || |||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||    
T  14777294 catgggcggttctaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacattta 14777195  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatc 389  Q
    |||||||||||||||||||||||||||||||||||| || |||   |||||||||||||||||| |||||||||||| | ||||||    
T  14777194 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatc 14777109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 34389223 - 34389056
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||  ||||||||| |||||||||||||||||||||||    
T  34389223 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggca 34389124  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| |||| || |||   |||| ||||||||||||| |||| ||| ||||||||||||||    
T  34389123 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacattatcgacgggttcatctc 34389056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 37002311 - 37002144
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| |||||||||  ||| ||||||||||||||||||||||||  || ||| ||||||| | ||||||||| |||||||||||||||||||||||    
T  37002311 ggcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 37002212  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| |||| || |||   |||||||||||||||||| |||||||||||||||||||||||    
T  37002211 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 37002144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 236 - 391
Target Start/End: Original strand, 35090177 - 35090335
Alignment:
Q  236 gggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 335  Q
    |||||||||||||||||||||| ||||||||||||||||  || ||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  35090177 gggcggtcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaa 35090276  T
Q  336 ttgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    || |||| || |||   |||| ||||||||||||| |||||||||||||| ||||||||    
T  35090277 ttctcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 35090335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 227 - 389
Target Start/End: Complemental strand, 8867898 - 8867733
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||  || ||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  8867898 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacatttacaaaaagaaaaatttgggca 8867799  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatc 389  Q
    ||| ||||||| |||| || |||   |||| ||||||||||||| |||||||||||||| ||||||    
T  8867798 atcggaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatc 8867733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 33685564 - 33685731
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    ||||||||  ||| ||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  33685564 ggcgaccccaggcagtcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacacttacaaaaagaaaaatttgggca 33685663  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| |||  || |||   ||||   ||||||||||| ||||||||||||||||| |||||    
T  33685664 atctgaaaattctcatacgcaaatatgtctcataattttatttagcacactattgacgggtttatctc 33685731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 246 - 391
Target Start/End: Complemental strand, 40920151 - 40920003
Alignment:
Q  246 ccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacgcg 345  Q
    |||||||||||||||||||||||||||||  | | |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||  |    
T  40920151 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 40920052  T
Q  346 aaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
     |||   |||| ||||||||||||| |||||||||||||||||||||||    
T  40920051 caaataggtctcggaattttatttagcacactattgacgggttcatctc 40920003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 236 - 391
Target Start/End: Complemental strand, 43184626 - 43184468
Alignment:
Q  236 gggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 335  Q
    |||||||||| ||||||||||||||||||||| | |||   ||| |||||||||||| ||||||| | ||||||||||||||||||||||||||||||||    
T  43184626 gggcggtcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaaaa 43184527  T
Q  336 ttgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    || |||| || |||   ||||  |||||||||||| |||||||||||||||||||||||    
T  43184526 ttctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 43184468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 231 - 391
Target Start/End: Original strand, 26624749 - 26624913
Alignment:
Q  231 accctgggcggtcgcccgggctcgat-cgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 329  Q
    |||| ||||||||||| ||||||||| |||||||||||||| |||  || ||| |||||||   ||||||||| ||||||||||||||||||||||||||    
T  26624749 accccgggcggtcgcctgggctcgattcgataatttttgcatattagacccaatccaaaagttaattaacacacttacaaaaagaaaaatttgggcaatc 26624848  T
Q  330 tgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||||||| |||| || |||   |||| ||||||||||||| |||||||||||||||||||||||    
T  26624849 tgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 26624913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 250 - 390
Target Start/End: Complemental strand, 38638380 - 38638237
Alignment:
Q  250 gctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa 349  Q
    ||||||| |||||||||||||||||  |  ||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||| |||| || |||    
T  38638380 gctcgattgataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaa 38638281  T
Q  350 ---gtcttggaattttatttaccacactattgacgggttcatct 390  Q
       |||| ||||||||||||| ||||||||||||||||||||||    
T  38638280 taggtctcggaattttatttagcacactattgacgggttcatct 38638237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 245 - 391
Target Start/End: Original strand, 36658199 - 36658348
Alignment:
Q  245 cccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacgc 344  Q
    ||||| ||||||||||||||||||||||||  || ||||| ||||||| ||||||| | | ||||||| |||||||||||||||||||||||| |||| |    
T  36658199 cccggactcgatcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaaatttgggcaatctgaaaattctcacac 36658298  T
Q  345 gaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    | |||   |||| ||||||||||||| |||||||||||||||||||||||    
T  36658299 gcaaataggtctcggaattttatttagcacactattgacgggttcatctc 36658348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 7002725 - 7002892
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| | ||||||||||||||||||||||  ||||||  |||||  || ||||||||||||| |||||||||  |||||||| |||||||||| ||    
T  7002725 ggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaaaaataaaaatttggaca 7002824  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||| |||||| |||| || |||   |||  ||||||||||||| |||||||||||||||||||||||    
T  7002825 atctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7002892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 7048596 - 7048763
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| | ||||||||||||||||||||||  ||||||  |||||  || ||||||||||||| |||||||||  |||||||| |||||||||| ||    
T  7048596 ggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaaaaataaaaatttggaca 7048695  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||| |||||| |||| || |||   |||  ||||||||||||| |||||||||||||||||||||||    
T  7048696 atctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7048763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 10868583 - 10868522
Alignment:
Q  286 aaaagcccattaacacatttacaaaaagaaaaatttgggc--aatctgaaaattgtcacgcg 345  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||    
T  10868583 aaaagcccattaacacatttacaaaaagaaaaatttgggcaaaatctgaaaattctcacgcg 10868522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 26502797 - 26502885
Alignment:
Q  214 ggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacaca 302  Q
    ||||| ||||| |||||||||  ||| |||||||||||||||||||   |||||||| ||| | | |||||||||||||||||||||||    
T  26502797 ggttccaccgtgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacaca 26502885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 302
Target Start/End: Complemental strand, 26589917 - 26589829
Alignment:
Q  214 ggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacaca 302  Q
    ||||| ||||| |||||||||  ||| |||||||||||||||||||   |||||||| ||| | | |||||||||||||||||||||||    
T  26589917 ggttccaccgtgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacaca 26589829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 10876861 - 10876829
Alignment:
Q  240 ggtcgcccgggctcgatcgataatttttgcaca 272  Q
    |||||||||||||||||||||||||||||||||    
T  10876861 ggtcgcccgggctcgatcgataatttttgcaca 10876829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 8e-71; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 210 - 388
Target Start/End: Original strand, 10033910 - 10034091
Alignment:
Q  210 gggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaa 309  Q
    ||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  10033910 gggcggttctaccgtatggcgaccccggacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 10034009  T
Q  310 aaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcat 388  Q
    ||||||||||||||||||||||||||||||||| || |||   |||||||||||||||||| ||||||||||||||||||||    
T  10034010 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 10034091  T

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Target: chr5; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 210 - 391
Target Start/End: Original strand, 13817960 - 13818144
Alignment:
Q  210 gggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaa 309  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  13817960 gggcggttctaccgtatggcgaccccgggcggtcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 13818059  T
Q  310 aaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||||||||||||||||||||||||| || |||   ||||||||| |||||||| ||||||||||||||| |||||||    
T  13818060 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaaatttatttagcacactattgacgggctcatctc 13818144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 207 - 391
Target Start/End: Original strand, 39434676 - 39434863
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  39434676 catgggcggttctaccgtgtggcgaccctgggcggtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacattta 39434775  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||| ||||||||||||||||||||||||||||||  | |||   ||||| |||||||||||| |||||||||||| | ||||||||    
T  39434776 caaaatgaaaaatttgggcaatctgaaaattgtcacatgtaaataggtctttgaattttatttagcacactattgacagtttcatctc 39434863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 207 - 391
Target Start/End: Complemental strand, 36293808 - 36293621
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||||||||| ||||||||| | ||||||| |||| |||||||||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  36293808 catgggcggttctaccgtgtggcgaccccgagcggtcgtccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacattta 36293709  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||||||||||||||||||||||||||||||||||| || |||   |||||||||||||||||| ||||||||| || | ||||||||    
T  36293708 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactatttacagtttcatctc 36293621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 211 - 390
Target Start/End: Complemental strand, 1776559 - 1776377
Alignment:
Q  211 ggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaa 310  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||| || |||||| ||||| |||||||||||||||||||    
T  1776559 ggcggttctaccgtatgacgaccccgggcggtcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaa 1776460  T
Q  311 aagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatct 390  Q
    |||||||||||||||||| ||||||||||||| || |||   |||||||||||||||||| |||||||| ||| |||||||||    
T  1776459 aagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactatcgacaggttcatct 1776377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 207 - 388
Target Start/End: Complemental strand, 39657693 - 39657509
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||||||  |||||||||||  | ||||||  |||||||||| |||||||||||||||||  ||||||||||||||| ||||||||||||||    
T  39657693 catgggcggttctactatatggcgaccccagacggtcgttcgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacattta 39657594  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcat 388  Q
    |||||||||||||||||||||||||||||||||||| || |||   |||||||||||||||||| ||||||||||||||||||||    
T  39657593 caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 39657509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 207 - 391
Target Start/End: Complemental strand, 26283505 - 26283318
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||| ||||| | ||||||  |||||||||||||||||||||||||||||||||||||||  |||||||| |||||  ||||||||||||||    
T  26283505 catgggcggttccaccgtgtagcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacattta 26283406  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
     ||||||||||||||||||||||||||||||||||| || |||   |||||||||||||||||  |||||||||||| | ||||||||    
T  26283405 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 26283318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 207 - 375
Target Start/End: Complemental strand, 3155818 - 3155647
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||||| |||||||||| || |||||||||| ||||||||||| ||||||||||||||||| |||||||| ||||| |||||||||||||||    
T  3155818 catgggcggttctatcgtatggcgatcccgggcggtcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacattta 3155719  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacacta 375  Q
     |||||||||||||||| |||||||||||||||||| || |||    ||||||||||||||||| |||||||    
T  3155718 taaaaagaaaaatttggacaatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacacta 3155647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 245 - 391
Target Start/End: Original strand, 16155015 - 16155164
Alignment:
Q  245 cccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacgc 344  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |    
T  16155015 cccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacac 16155114  T
Q  345 gaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    | |||   |||||||||||||||||| |||||||||||| | ||||||||    
T  16155115 gcaaataggtcttggaattttatttagcacactattgacagattcatctc 16155164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 17332718 - 17332551
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| ||||| ||||||||||||||||||||||||||||| |||  || ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  17332718 ggcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 17332619  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| |||| || |||   |||| ||||||||||||| |||||||||||||| ||||||||    
T  17332618 atctgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 17332551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 31680367 - 31680534
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| |||||||||||||||||||||||||||||||| | ||||  || ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  31680367 ggcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 31680466  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| ||||  | |||   |||| ||||||||||||| |||||||||||||||||||||||    
T  31680467 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 31680534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 241 - 391
Target Start/End: Original strand, 33430335 - 33430488
Alignment:
Q  241 gtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtc 340  Q
    ||||||||||||||||||||||||||||| ||||  || ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||    
T  33430335 gtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc 33430434  T
Q  341 acgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    || || |||   |||| ||||||||||||| |||||||||||||||||||||||    
T  33430435 acacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33430488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 206 - 391
Target Start/End: Original strand, 37254620 - 37254808
Alignment:
Q  206 gcatgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattt 305  Q
    ||||||||||||  ||||   ||||||||  ||||||||||| ||||||||||||||||||||||||||  || ||||||||||| | ||||||||| ||    
T  37254620 gcatgggcggtttcaccgctcggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacactt 37254719  T
Q  306 acaaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||||||||||||||||||||||||||||||| |||| || |||   |||| ||||||||||||| |||| ||||||||||||||||||    
T  37254720 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatctc 37254808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 12279027 - 12278860
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    ||||| || |||||||||||||| ||||||||||||||||||||||||  || ||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  12279027 ggcgatcccgggcggtcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacacttacaaaaagaaaaatttgggca 12278928  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| |||| || |||   |||| ||||||||||||| |||||||||||| ||||||||||    
T  12278927 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacaggttcatctc 12278860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 257 - 388
Target Start/End: Complemental strand, 16334013 - 16333879
Alignment:
Q  257 cgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtct 353  Q
    ||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||   ||||    
T  16334013 cgataatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtct 16333914  T
Q  354 tggaattttatttaccacactattgacgggttcat 388  Q
    |||||||||||||| |||||||||||||| |||||    
T  16333913 tggaattttatttagcacactattgacggattcat 16333879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 214 - 391
Target Start/End: Original strand, 19985926 - 19986106
Alignment:
Q  214 ggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaag 313  Q
    |||| ||||||||| |||||  ||||||||| ||| |||||||||||||||||||||||||  | |||||||||||| |||||| |||||||||||||||    
T  19985926 ggttttaccgtatgacgacctcgggcggtcgtccgagctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacatttacaaaaag 19986025  T
Q  314 aaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| ||||| |||||| |||| || |||   |||||| ||||||||||| |||||||||||| ||||||||||    
T  19986026 aaaaatttgggtaatctaaaaattatcacacgcaaataggtcttgaaattttatttaacacactattgacaggttcatctc 19986106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 31501883 - 31501716
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| ||||| | |||||||||||||||||||||||||||||||  || ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  31501883 ggcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 31501784  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| || | || |||   |||| | ||||||||||| ||||||||||| | |||||||||    
T  31501783 atctgaaaattctcgcacgcaaataggtctcgaaattttatttagcacactattgatgagttcatctc 31501716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 246 - 391
Target Start/End: Original strand, 43068896 - 43069044
Alignment:
Q  246 ccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacgcg 345  Q
    |||||||||||| ||||||||| ||||||  || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||  |    
T  43068896 ccgggctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattcttacatg 43068995  T
Q  346 ---aaaagtcttggaattttatttaccacactattgacgggttcatctc 391  Q
       | |||||| ||||||||||||| |||||||||| ||| ||||||||    
T  43068996 taaataagtctcggaattttatttagcacactattgccggattcatctc 43069044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 236 - 391
Target Start/End: Original strand, 36291380 - 36291538
Alignment:
Q  236 gggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 335  Q
    ||||||||| ||||| |||||| ||||||||||||||||  |   |||| |||||  |||||||||||||||||||||||||||||||||||||| ||||    
T  36291380 gggcggtcgtccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacatttacaaaaagaaaaatttgggcaatctcaaaa 36291479  T
Q  336 ttgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    || | || |  |||   ||||  |||||||||||| |||||||||||||||||||||||    
T  36291480 ttattacacacaaataggtctcagaattttatttaacacactattgacgggttcatctc 36291538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 240 - 324
Target Start/End: Original strand, 28801300 - 28801384
Alignment:
Q  240 ggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttggg 324  Q
    |||||||| ||||||||||||||||||||||||||  |  ||| ||||||||||||||||||| |||||||||||||||||||||    
T  28801300 ggtcgccctggctcgatcgataatttttgcacattagatccaaaccaaaagcccattaacacacttacaaaaagaaaaatttggg 28801384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 15381751 - 15381809
Alignment:
Q  7 gttctatgctatccttatactacatcacttgccccctgaaatttccgacagtctctgct 65  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15381751 gttctattatatccttatactacatcacttgccccctgaaatttccgacagtctctgct 15381809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 263
Target Start/End: Original strand, 14316641 - 14316694
Alignment:
Q  210 gggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataat 263  Q
    |||||||||||||||||||||| |  |||||||||||| |||||||||||||||    
T  14316641 gggcggttctaccgtatggcgatctcgggcggtcgcccaggctcgatcgataat 14316694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 202641 - 202724
Alignment:
Q  229 cgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactc-aacccaaaagcccattaacacatttacaaaaa 312  Q
    ||||||| || |||||||||||||||||||||||||| || ||||| |  || |||||||||||||||||| ||| | |||||||    
T  202641 cgaccctaggtggtcgcccgggctcgatcgataatttgtgtacatt-aggtcgaacccaaaagcccattaagacactaacaaaaa 202724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 203 - 234
Target Start/End: Complemental strand, 16334049 - 16334018
Alignment:
Q  203 gaagcatgggcggttctaccgtatggcgaccc 234  Q
    ||||||||||||||||||||||||||||||||    
T  16334049 gaagcatgggcggttctaccgtatggcgaccc 16334018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 3e-70; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 207 - 388
Target Start/End: Original strand, 42439966 - 42440150
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||    
T  42439966 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacattta 42440065  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcat 388  Q
    |||||||||||||||||||||||||||||||||||| || |||   |||||| ||||||||||| |||||||||||||| |||||    
T  42440066 caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttgcaattttatttagcacactattgacggattcat 42440150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 207 - 391
Target Start/End: Complemental strand, 41251821 - 41251634
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||||||||| | | ||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  41251821 catgggcggttctaccgtgtagtgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 41251722  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||||||||||||||||||||||||||||||||||| || |||   |||||||||||||||||| |||||||||||| | ||||||||    
T  41251721 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 41251634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 207 - 388
Target Start/End: Complemental strand, 32127328 - 32127144
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||    
T  32127328 catgggcggttctagcgtatggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacattta 32127229  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcat 388  Q
    ||||||||||||||| |||||||||||||||||||| || |||    ||||||||||||||||| ||||||||||||||||||||    
T  32127228 caaaaagaaaaatttaggcaatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacactattgacgggttcat 32127144  T

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Target: chr2; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 203 - 388
Target Start/End: Original strand, 35962691 - 35962879
Alignment:
Q  203 gaagcatgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacaca 302  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||  |||||||||||||||  |||||||||    
T  35962691 gaagcatgggcggttctaccgtatggcgaccccaggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacaca 35962790  T
Q  303 tttacaaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcat 388  Q
    ||||||||||||||| |||||||||||||||||||||||| |  |||   |||||||||||||||||| ||||||||||||||||||||    
T  35962791 tttacaaaaagaaaattttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 35962879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 207 - 388
Target Start/End: Original strand, 16405580 - 16405764
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||| ||||||||||||||    
T  16405580 catgggcggttctaccatatggtgaccctgggcggtcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacattta 16405679  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcg---aaaagtcttggaattttatttaccacactattgacgggttcat 388  Q
     |||||||||||||||| |||||||||||||||||| ||   | |||||||||||||||||||| ||||||||||||||||||||    
T  16405680 taaaaagaaaaatttggacaatctgaaaattgtcacacgcaaataagtcttggaattttatttagcacactattgacgggttcat 16405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 207 - 391
Target Start/End: Complemental strand, 17445226 - 17445041
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||||||||| ||||||||  ||||||||||||| ||||||||||||||||||||||  |  ||||||||||||||||||||||||||||||    
T  17445226 catgggcggttctaccgtgtggcgacctcgggcggtcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacattta 17445129  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||||||||||||||||||||||||||||||||||| || |||   |||||||||||||||||| |||||||||||| | ||||||||    
T  17445128 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 17445041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 211 - 391
Target Start/End: Complemental strand, 31581805 - 31581622
Alignment:
Q  211 ggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaa 310  Q
    ||||||||||| |||||||||||  |||||||||||| ||||||| ||||| |||||||| |||  ||||| ||||||||||||||||||||||||||||    
T  31581805 ggcggttctactgtatggcgaccacgggcggtcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaa 31581706  T
Q  311 aagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||||||||||||||||||||||||||||||| || |||   |||||||||||||||||| |||||||||||||||||||||||    
T  31581705 aagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 31581622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 207 - 388
Target Start/End: Original strand, 18981597 - 18981780
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||  |||||||||||||| ||||||| |||||||    
T  18981597 catgggcggttctaccgtatggcgaccc-gggcggtcgtccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacattta 18981695  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcat 388  Q
    |||||||||||||||||||||| | ||||||||||| || |||   |||||||||||||||||| |||||| |||||||||||||    
T  18981696 caaaaagaaaaatttgggcaatttaaaaattgtcacacgcaaataggtcttggaattttatttagcacactgttgacgggttcat 18981780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 207 - 391
Target Start/End: Complemental strand, 6403991 - 6403804
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||| ||||| | ||||||| |||||||||||||||||||||||||||||||||||||||  |||||||| |||||  ||||||||||||||    
T  6403991 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacattta 6403892  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
     ||||||||||||||||||||||||||||||||||| || |||   |||||||||||||||||  |||||||||||| | ||||||||    
T  6403891 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 6403804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 207 - 342
Target Start/End: Complemental strand, 2958287 - 2958153
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  2958287 catgggcggttctaccgtatggcgaccccgggcggtcgtccgggctcgatcgataatttt-gcacattagactcaacccaaaagcccattaacacattta 2958189  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcac 342  Q
    |||| ||||||||||||| |||||||||||||||||    
T  2958188 caaagagaaaaatttgggtaatctgaaaattgtcac 2958153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 45418583 - 45418750
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||  |  ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  45418583 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 45418682  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| |||| || |||   ||||  |||||||||||| |||||||||||||||||||||||    
T  45418683 atctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 45418750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 44084770 - 44084603
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||| ||| ||| |||||||  |||||||||| |||||||||||||||||||||||    
T  44084770 ggcgaccccgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttacaaaaagaaaaatttgggca 44084671  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| |||  || |||   ||||  |||||||||||| |||||||||||||||||||||||    
T  44084670 atctgaaaattctcatacgcaaataggtctcagaattttatttagcacactattgacgggttcatctc 44084603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 236 - 390
Target Start/End: Original strand, 771008 - 771165
Alignment:
Q  236 gggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 335  Q
    ||||||||||||||||||||||||||| |||||||||||  || ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  771008 gggcggtcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacacacttacaaaaagaaaaatttgggcaatctgaaaa 771107  T
Q  336 ttgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatct 390  Q
    || |||| || |||   |||| |||| |||||||| |||| |||||||||||||||||    
T  771108 ttctcacacgcaaataggtctcggaactttatttagcacattattgacgggttcatct 771165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 227 - 390
Target Start/End: Original strand, 8147351 - 8147518
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||  || |||| |||||| | ||||||||| |||||||||||||||||||||||    
T  8147351 ggcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgggca 8147450  T
Q  327 atctgaaaa-ttgtcacgcgaaaag---tcttggaattttatttaccacactattgacgggttcatct 390  Q
    ||||||||| || |||| || |||    ||| ||||||||||||| ||||||||||||||||||||||    
T  8147451 atctgaaaaattctcacacgcaaatagatctcggaattttatttaacacactattgacgggttcatct 8147518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 245 - 391
Target Start/End: Complemental strand, 12756986 - 12756837
Alignment:
Q  245 cccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacgc 344  Q
    |||||| |||||||||||||||||| ||||  || ||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||| |||| |    
T  12756986 cccgggttcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacac 12756887  T
Q  345 g---aaaagtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |   | |||||| ||||||||||||| |||||||||||||||||||||||    
T  12756886 gcaaataagtctcggaattttatttagcacactattgacgggttcatctc 12756837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 229 - 388
Target Start/End: Complemental strand, 8059498 - 8059336
Alignment:
Q  229 cgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaat 328  Q
    |||||| || || |||||| ||||| ||||||||||||||||||||  | |||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  8059498 cgaccccggccgatcgcccaggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaaaaagaaaaatttggccaat 8059399  T
Q  329 ctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcat 388  Q
     |||||||| |||| |  |||   |||| ||||||||||||| ||||| ||||||||||||||    
T  8059398 ttgaaaattctcacacacaaatcggtctcggaattttatttagcacacaattgacgggttcat 8059336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 210 - 388
Target Start/End: Original strand, 2285845 - 2286026
Alignment:
Q  210 gggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaa 309  Q
    |||||||||||||| ||||||| |  || |||||   | || ||||||||||||||||||||||| ||  ||||| ||||| | |||||||||||||| |    
T  2285845 gggcggttctaccggatggcgatctcggacggtcattcaggttcgatcgataatttttgcacattaaatccaaccaaaaagtctattaacacatttacga 2285944  T
Q  310 aaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcat 388  Q
    || |||||||||| ||||||||||||||||||| || |||   || ||||||||||||||| ||||||||||||| ||||||    
T  2285945 aaggaaaaatttgagcaatctgaaaattgtcacacgcaaataggttttggaattttatttagcacactattgacgtgttcat 2286026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 246 - 337
Target Start/End: Complemental strand, 26162847 - 26162756
Alignment:
Q  246 ccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaatt 337  Q
    ||||||||  |||||||||||| |||||| || ||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||    
T  26162847 ccgggctccttcgataatttttacacattaaattcaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaatctaaaaatt 26162756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 26237957 - 26238065
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc- 325  Q
    |||||||| |||||||||||||||||||||||||| |||||||| |||  |  ||| ||||||| ||||||||||| ||||||||||||||||||||||     
T  26237957 ggcgaccccgggcggtcgcccgggctcgatcgata-tttttgcaaattagatgcaaaccaaaagtccattaacacacttacaaaaagaaaaatttgggca 26238055  T
Q  326 aatctgaaaa 335  Q
    ||||||||||    
T  26238056 aatctgaaaa 26238065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 236 - 302
Target Start/End: Complemental strand, 7072710 - 7072644
Alignment:
Q  236 gggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacaca 302  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||    
T  7072710 gggcggtcgcccgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacaca 7072644  T

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Target: chr2; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 251 - 342
Target Start/End: Complemental strand, 4555354 - 4555261
Alignment:
Q  251 ctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc--aatctgaaaattgtcac 342  Q
    |||||||||||||||||||||||  ||| |||||||||||| | |||||||| |||||||||||||| |||||||  |||||||||||| ||||    
T  4555354 ctcgatcgataatttttgcacatcaaacccaacccaaaagctcgttaacacacttacaaaaagaaaattttgggcaaaatctgaaaattctcac 4555261  T

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Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 302
Target Start/End: Original strand, 34905969 - 34906024
Alignment:
Q  247 cgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacaca 302  Q
    |||||||||||||||||||||||||||| | |  ||||||||||||||||||||||    
T  34905969 cgggctcgatcgataatttttgcacattaagcctaacccaaaagcccattaacaca 34906024  T

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Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 391
Target Start/End: Complemental strand, 4555226 - 4555192
Alignment:
Q  357 aattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||||||||||||||||| |||||||||    
T  4555226 aattttatttaccacactattgacgagttcatctc 4555192  T

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Target: chr6 (Bit Score: 128; Significance: 5e-66; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 206 - 388
Target Start/End: Complemental strand, 34948946 - 34948761
Alignment:
Q  206 gcatgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattt 305  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  34948946 gcatgggcggttctaccgtatggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 34948847  T
Q  306 acaaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcat 388  Q
    ||||||||||||||||||||||||||||||||||||| |  |||    ||||| ||||||||||| ||||||||||||||||||||    
T  34948846 acaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaatagatcttgaaattttatttagcacactattgacgggttcat 34948761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 207 - 388
Target Start/End: Original strand, 13837801 - 13837985
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||| |||||  ||||||||||||||| ||| ||||||||||    
T  13837801 catgggcggttctaccgtatggcgaccccgggcgatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacattta 13837900  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcat 388  Q
    |||||||||||||||||||||||||||||||||||| || |||   |||||||||||||||||| ||||||||||||||||||||    
T  13837901 caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 13837985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 207 - 391
Target Start/End: Original strand, 398597 - 398784
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||| ||||| | ||||||| |||||||||||||||||||||||||||||||||||||||  |||||||| |||||| ||||||||||||||    
T  398597 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 398696  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
     ||||||||||||||||||||| ||||||||||||| || |||   |||||||||||||||||  |||||||||||| | ||||||||    
T  398697 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 398784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 28996730 - 28996897
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| ||||||||||||| |||||||||||||||||||| ||||  || ||||| ||||| | ||||||||| |||||||||||||||||||||||    
T  28996730 ggcgaccccgggcggtcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacacttacaaaaagaaaaatttgggca 28996829  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| |||| || |||   |||| ||||||||||||| |||||||||||||||||||||||    
T  28996830 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 28996897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 18339106 - 18339273
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||  || ||| | ||||||| ||||||||| |||||||||||||| ||||||||    
T  18339106 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 18339205  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| ||||  | |||   |||| ||||||||||||| |||||||||||||||||||||||    
T  18339206 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 18339273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 243 - 391
Target Start/End: Complemental strand, 33229487 - 33229336
Alignment:
Q  243 cgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcac 342  Q
    |||||||||||||||||| ||||||| |||||  || ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| | ||    
T  33229487 cgcccgggctcgatcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaatttgggcaatctgaaaattcttac 33229388  T
Q  343 gcg---aaaagtcttggaattttatttaccacactattgacgggttcatctc 391  Q
     ||   | |||||| || |||||||||| |||||||||| ||| ||||||||    
T  33229387 acgtaaataagtctcgggattttatttagcacactattgccggattcatctc 33229336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 236 - 391
Target Start/End: Original strand, 29743292 - 29743450
Alignment:
Q  236 gggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 335  Q
    ||||||| |||||||||| ||||||||||||||||||||  || ||||| |||||  |||||||||||||||| ||||||||||||||||||||||||||    
T  29743292 gggcggttgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacatttacagaaagaaaaatttgggcaatctgaaaa 29743391  T
Q  336 ttgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    || | || || |||   |||| ||||||||||||| ||||||| || ||| ||||||||    
T  29743392 ttcttacacgcaaataggtctcggaattttatttagcacactagtgccggattcatctc 29743450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 31028531 - 31028435
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgg 323  Q
    |||||||| | ||||| |||||| ||||||||||||||||||||||||  |  ||||| |||||| ||||||||||||||||||||| ||| |||||    
T  31028531 ggcgaccccgagcggttgcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttacaaaaaggaaattttgg 31028435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 24697969 - 24697899
Alignment:
Q  242 tcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaa 312  Q
    |||||||||||| ||||||||||||| ||||||   | ||||||||||||||||||||||| |||||||||    
T  24697969 tcgcccgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacacttacaaaaa 24697899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 242 - 302
Target Start/End: Original strand, 3050094 - 3050154
Alignment:
Q  242 tcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacaca 302  Q
    |||||||||||| ||| |||||||||||||||| | | ||||| |||||||||||||||||    
T  3050094 tcgcccgggctcaatcaataatttttgcacattgagcgcaaccgaaaagcccattaacaca 3050154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 13647017 - 13647053
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataat 263  Q
    |||||||| ||||||||||||||||||||||||||||    
T  13647017 ggcgaccccgggcggtcgcccgggctcgatcgataat 13647053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 312
Target Start/End: Original strand, 24695538 - 24695572
Alignment:
Q  278 ctcaacccaaaagcccattaacacatttacaaaaa 312  Q
    ||||||||||||||||||||||||| |||||||||    
T  24695538 ctcaacccaaaagcccattaacacacttacaaaaa 24695572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 4e-63; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 210 - 391
Target Start/End: Complemental strand, 29728570 - 29728386
Alignment:
Q  210 gggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaa 309  Q
    ||||||||||||||||||||||||| || |||||||||| ||||||||||||| |||||||||||  ||||||||||||||| |||||||||||||||||    
T  29728570 gggcggttctaccgtatggcgaccccggacggtcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacatttacaa 29728471  T
Q  310 aaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||||||||||||||||||||||||||||| || || |||   ||||| |||||||||||| |||||||||||||||||||||||    
T  29728470 aaagaaaaatttgggcaatctgaaaattgtgacacgcaaataggtcttcgaattttatttagcacactattgacgggttcatctc 29728386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 210 - 391
Target Start/End: Complemental strand, 3648978 - 3648794
Alignment:
Q  210 gggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaa 309  Q
    |||||||||||||||||||||| || || | ||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  3648978 gggcggttctaccgtatggcgatccgggacagtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaa 3648879  T
Q  310 aaagaaaaatttgggcaatctgaaaattgtcacgcgaa---aagtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||||||| |||||||||||||||||||||||| || |   | || ||||||||||||||| |||||||||||||||||||||||    
T  3648878 aaagaaaattttgggcaatctgaaaattgtcacacgcaagtaggttttggaattttatttagcacactattgacgggttcatctc 3648794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 211 - 388
Target Start/End: Original strand, 15838270 - 15838449
Alignment:
Q  211 ggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaa 310  Q
    |||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||| ||||||||| ||||| |||||||||||||||| ||    
T  15838270 ggcggttctaccgtatggcgaccccgggcggtcacccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttac-aa 15838368  T
Q  311 aagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcat 388  Q
    ||||||||||||||||||||||||||| |||| || |||   |||||||||||||||||| ||||||||||||||||||||    
T  15838369 aagaaaaatttgggcaatctgaaaattttcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 15838449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 231 - 391
Target Start/End: Complemental strand, 16788188 - 16788025
Alignment:
Q  231 accctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatct 330  Q
    |||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  16788188 accccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatct 16788089  T
Q  331 gaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
     |||| | |||| || |||   |||||||||||||||||| |||||||||||||||||||||||    
T  16788088 taaaactctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 16788025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 207 - 391
Target Start/End: Complemental strand, 34137012 - 34136825
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||| ||||  ||||| ||||||||| | |||||||||||||||||||||||||||||||||||||  |||||||||||||| | ||||||||| |||    
T  34137012 catgggtggtttcaccgtctggcgaccccgagcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacactta 34136913  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||||||||||||||||||||||| |||| || |||   |||| | ||||||||||| ||||| ||||| |||||||||||    
T  34136912 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttagcacacaattgatgggttcatctc 34136825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 4404008 - 4404175
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||| | |||||||||||||||||||||||    
T  4404008 ggcgaccccaggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatacttacaaaaagaaaaatttgggca 4404107  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||| |||||| |||| || |||   |||| ||||||||||||| ||||| ||||| |||||||||||    
T  4404108 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 4404175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 23402108 - 23402275
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| |||||||||||||||||||||||||||| |||||| |||  || ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  23402108 ggcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 23402207  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| |||| || |||   |||| | ||||||||||| |||||||||||| ||||||||||    
T  23402208 atctgaaaattctcacacgcaaataggtctcgaaattttatttaacacactattgactggttcatctc 23402275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 207 - 391
Target Start/End: Original strand, 39914495 - 39914681
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    ||||| |||||| ||||| | ||||||| |||||||||||||||||||||||||||||||||||||||  |||||||| |||||| ||||||||||||||    
T  39914495 catggacggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 39914594  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
     ||||| ||||||||||||||| |||||||||||||  | |||   |||||||||||||||||  |||||||||||| | ||||||||    
T  39914595 taaaaa-aaaaatttgggcaatttgaaaattgtcacaagtaaataggtcttggaattttatttggcacactattgacagtttcatctc 39914681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 36408551 - 36408718
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||  |  ||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  36408551 ggcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacatttacaaaaagaaaatttttggca 36408650  T
Q  327 atctgaaaattgt--cacgcgaa-aagtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    || |||||||| |  ||||| || | ||||  |||||||||||| |||||||||| ||| ||||||||    
T  36408651 atttgaaaattcttacacgctaataggtctcagaattttatttaacacactattgccggattcatctc 36408718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 243 - 337
Target Start/End: Original strand, 3435285 - 3435381
Alignment:
Q  243 cgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc--aatctgaaaatt 337  Q
    |||||||||| |||||||||||||||||||||  || |||||||||| |||||||||||| ||||||||||||||||||||||  ||||||||||||    
T  3435285 cgcccgggcttgatcgataatttttgcacattagacccaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaaaatctgaaaatt 3435381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 249 - 378
Target Start/End: Original strand, 9877242 - 9877374
Alignment:
Q  249 ggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaa 348  Q
    |||||||| |||||||||||||||||  ||  |||||||||| | ||||||||| |||||||||||||||||||||||||||||||||| ||||  | ||    
T  9877242 ggctcgattgataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaa 9877341  T
Q  349 a---gtcttggaattttatttaccacactattg 378  Q
    |   |||| | ||||||||||| ||||||||||    
T  9877342 ataggtctcgaaattttatttagcacactattg 9877374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 2729363 - 2729196
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| |||||| ||||||||||||||||||||||||| |||||| ||  ||| ||||||||||||||||||| ||| |||||||||  ||| ||||    
T  2729363 ggcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacacttataaaaagaaattttttggca 2729264  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    || |||||| | |||  || |||   ||||   ||||||||||| ||||||||||| || ||||||||    
T  2729263 atttgaaaactctcatacgcaaataggtctcaaaattttatttagcacactattgatggattcatctc 2729196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 391
Target Start/End: Original strand, 42230971 - 42231104
Alignment:
Q  259 ataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttg 355  Q
    |||||||||||||||| ||  |||| |||||| ||||||||||  ||||||||||||||||||||||||| |||||||| |||   | |||   ||||      
T  42230971 ataatttttgcacattaaatccaactcaaaagtccattaacac--ttacaaaaagaaaaatttgggcaatttgaaaattctcatatgcaaataggtctca 42231068  T
Q  356 gaattttatttaccacactattgacgggttcatctc 391  Q
    |||||||||||| |||||||||||||| ||||||||    
T  42231069 gaattttatttagcacactattgacggattcatctc 42231104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 320
Target Start/End: Complemental strand, 40470637 - 40470567
Alignment:
Q  250 gctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatt 320  Q
    |||||||||||||||||||||||||  || |||  |||||| ||||||||||| ||| ||||| |||||||    
T  40470637 gctcgatcgataatttttgcacattagacccaaatcaaaagtccattaacacacttataaaaaaaaaaatt 40470567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 10397192 - 10397122
Alignment:
Q  242 tcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaa 312  Q
    |||||||||||| ||||||||||| | ||||||    |||||||||||||| ||||||||| ||| |||||    
T  10397192 tcgcccgggctcaatcgataatttcttcacattaggttcaacccaaaagccgattaacacagttaaaaaaa 10397122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 391
Target Start/End: Complemental strand, 40470509 - 40470475
Alignment:
Q  357 aattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| |||||||||||||||||||||||    
T  40470509 aattttatttagcacactattgacgggttcatctc 40470475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 34844763 - 34844799
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataat 263  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  34844763 ggcgaccctaggcggtcgcctgggctcgatcgataat 34844799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 2e-62; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 211 - 391
Target Start/End: Complemental strand, 34084305 - 34084122
Alignment:
Q  211 ggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaa 310  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| || |||||| ||||| |||||||||||||||||||    
T  34084305 ggcggttctaccgtatggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaa 34084206  T
Q  311 aagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||||||||||||||||| |||||||| |||| || |||   |||||||||||||||||| ||||||||||| |||||||||||    
T  34084205 aagaaaaatttgggcaatatgaaaattatcacacgcaaataggtcttggaattttatttagcacactattgatgggttcatctc 34084122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 207 - 390
Target Start/End: Complemental strand, 6269613 - 6269427
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||||||||| | |||| || ||||||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  6269613 catgggcggttctaccgtgtagcgatcccgggcggtcgtccggactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 6269514  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatct 390  Q
    |||||||||||||||||||||||||||||||||||| || |||   |||||||||||||||||| |||||||||||| | |||||||    
T  6269513 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 6269427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 204 - 391
Target Start/End: Complemental strand, 22968634 - 22968444
Alignment:
Q  204 aagcatgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacat 303  Q
    ||||||||||||||||||||| | ||||||| ||||||||| |||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  22968634 aagcatgggcggttctaccgtgtagcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacat 22968535  T
Q  304 ttacaaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||||||||||||||||||| ||||||||||| || |||   |||||| ||||||||||| |||||||||||| | ||||||||    
T  22968534 ttacaaaaagaaaaatttgggcaatctaaaaattgtcacacgtaaataggtcttgaaattttatttagcacactattgacagtttcatctc 22968444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 207 - 391
Target Start/End: Original strand, 19390126 - 19390313
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||| ||||||||||| ||||||||| ||||||||| ||||| |||||||||||||||||||||||  |||||||| ||||| | |||||||||||||    
T  19390126 catgggaggttctaccgtgtggcgaccccgggcggtcgtccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacacattta 19390225  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||||||||||||||||||||||||||||||||||| || |||   |||||||||||||||||| |||||||||||| | ||||||||    
T  19390226 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 19390313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 207 - 391
Target Start/End: Original strand, 39771770 - 39771957
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||| ||||| | ||||||| ||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  39771770 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 39771869  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
     ||||||||||||||||||||||||||||||||||| || |||   |||||| ||||||||||  |||||||||||| | ||||||||    
T  39771870 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 39771957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 226 - 391
Target Start/End: Original strand, 27935177 - 27935345
Alignment:
Q  226 tggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc 325  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  27935177 tggcaaccctgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacacttacaaaaagaaaaatttgggc 27935276  T
Q  326 aatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||||||||||| |||  ||||||   |||| ||||||||||||| || ||||||||||||||||||||    
T  27935277 aatctgaaaattctcatacgaaaataggtctcggaattttatttagcatactattgacgggttcatctc 27935345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 207 - 391
Target Start/End: Complemental strand, 11018399 - 11018212
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||  |||||  |||||| | |||||||||||| ||||||||||||||||||||||||||  |||||||||||||||| ||||||||| |||    
T  11018399 catgggcggtttcaccgtccggcgactccgggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 11018300  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||||||||||||||||||||||| |||| || |||   ||||  |||||||||||| ||||| |||||||||||||||||    
T  11018299 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcagaattttatttagcacacaattgacgggttcatctc 11018212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 45182981 - 45183148
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||  || ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  45182981 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 45183080  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| |||| |  |||   |||| ||||||||||||| |||||||||||||||||||||||    
T  45183081 atctgaaaattctcacacacaaataggtctcggaattttatttagcacactattgacgggttcatctc 45183148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 210 - 391
Target Start/End: Complemental strand, 40081922 - 40081741
Alignment:
Q  210 gggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaa 309  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||  |||||||| |||||| |||||||||||||||||    
T  40081922 gggcggttctaccgtatggcgactctgga-ggtcgcccgggctcgatcgataatttttgaacattagactcaacc-aaaagctcattaacacatttacaa 40081825  T
Q  310 aaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||||||||||| ||||||||||||| || |||    |||||| ||||| |||| |||||||||||||||||||||||    
T  40081824 aaagaaaaatttgggcaatttgaaaattgtcacacgcaaatagatcttgg-attttttttagcacactattgacgggttcatctc 40081741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 227 - 391
Target Start/End: Complemental strand, 6931061 - 6930894
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| || ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  6931061 ggcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacatttacaaaaagaaaaatttaggca 6930962  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| |||| || |||   |||| ||||||||||||| ||||||||||||| |||||||||    
T  6930961 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 6930894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 206 - 391
Target Start/End: Complemental strand, 6503757 - 6503569
Alignment:
Q  206 gcatgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattt 305  Q
    ||||||||||||  |||||  |||||||| ||||||||||||||||||||||||| ||||||||| |||  |||||||||||||||| |||| |||| ||    
T  6503757 gcatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacactt 6503658  T
Q  306 acaaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||||||||  |||||||||||||| ||||  | |||   |||| ||| ||||||||| ||||| ||||| |||||||||||    
T  6503657 acaaaaagaaaaatttaagcaatctgaaaattctcacaggcaaataggtctcggatttttatttagcacacaattgatgggttcatctc 6503569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 33040953 - 33041120
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| |||||||||| |||||||||| ||||||||||||| |||  || ||||||||||||  ||||||||| |||||||||||||||||||  ||    
T  33040953 ggcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgaaca 33041052  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    || |||||||| |||| || |||   |||| ||||||||||||| |||||||||||||||||||||||    
T  33041053 atttgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33041120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 375
Target Start/End: Complemental strand, 19565668 - 19565517
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    ||||| || ||||||||||||||| || ||||||||||||||||||||  || ||||| ||||  |||||||||||||||||||||||||||||||| ||    
T  19565668 ggcgatcccgggcggtcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacatttacaaaaagaaaaatttggaca 19565569  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacacta 375  Q
    ||||||||||| | || || |||   |||| ||||||||||||| |||||||    
T  19565568 atctgaaaattcttacacgcaaataggtctcggaattttatttagcacacta 19565517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 45335875 - 45336041
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||  |||||||||||||| ||| ||||||||||||| ||||||  || ||||| ||||| | |||||||||||||||||||||||||| ||||||    
T  45335875 ggcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtc-attaacacatttacaaaaagaaaaatctgggca 45335973  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| | || || |||   |||||||||||||||||| ||||||| || ||| ||||||||    
T  45335974 atctgaaaattcttacacgcaaataggtcttggaattttatttagcacactagtgccggattcatctc 45336041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 35514266 - 35514429
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| || |||||| ||||||||||||||||||||| ||| | |  |  ||||||||||| |||||||||||    ||||||||||||||||| ||    
T  35514266 ggcgaccccggacggtcgtccgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaacaca----caaaaagaaaaatttggaca 35514361  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    || |||||||| |||| || |||   |||| ||||||||||||  |||||||||||||||||||||||    
T  35514362 atatgaaaattctcactcgcaaataggtctaggaattttattttgcacactattgacgggttcatctc 35514429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 211 - 284
Target Start/End: Original strand, 22922141 - 22922214
Alignment:
Q  211 ggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacc 284  Q
    |||||||| |||||||||||| || |||||||||| |||||||||||||| ||||||||||||| |||||||||    
T  22922141 ggcggttccaccgtatggcgatcccgggcggtcgctcgggctcgatcgatcatttttgcacattaaactcaacc 22922214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 323
Target Start/End: Original strand, 5135291 - 5135365
Alignment:
Q  249 ggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgg 323  Q
    |||||||||||| ||||||| |||||  || ||||| |||||| |||||||||| ||||||||||||||||||||    
T  5135291 ggctcgatcgattatttttgtacattagacccaacctaaaagctcattaacacacttacaaaaagaaaaatttgg 5135365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 351 - 391
Target Start/End: Original strand, 22922222 - 22922262
Alignment:
Q  351 tcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  22922222 tcttggaattttatttaacacactattgacgggttcatctc 22922262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 391
Target Start/End: Original strand, 5135421 - 5135455
Alignment:
Q  357 aattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| |||||||||||||||||||||||    
T  5135421 aattttatttagcacactattgacgggttcatctc 5135455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 264
Target Start/End: Original strand, 6890998 - 6891035
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatt 264  Q
    |||||| | |||||||||||||||||||||||||||||    
T  6890998 ggcgacaccgggcggtcgcccgggctcgatcgataatt 6891035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 3e-61; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 205 - 391
Target Start/End: Complemental strand, 42311130 - 42310941
Alignment:
Q  205 agcatgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatt 304  Q
    |||| |||||||||||||||||||||||||  | || |||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  42311130 agcaggggcggttctaccgtatggcgaccccagacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacatt 42311031  T
Q  305 tacaaaaagaaaaatttgggcaatctgaaaattgtcacgcg---aaaagtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||||||||||||||||||||||||||||||||||||| ||   | |||||||| |||||||||||  || |||||||||||||||||||    
T  42311030 tacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataagtcttgaaattttatttagtacgctattgacgggttcatctc 42310941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 207 - 388
Target Start/End: Original strand, 7433425 - 7433609
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    ||||||||||||||||||||||| |||| ||||||||||||| |||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  7433425 catgggcggttctaccgtatggcaaccccgggcggtcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacattta 7433524  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcat 388  Q
    ||||||||||| |||||||||||| ||||||||||| |  |||   |||||| ||||||||||| ||||||||||||||||||||    
T  7433525 caaaaagaaaattttgggcaatctaaaaattgtcacacacaaataggtcttgaaattttatttagcacactattgacgggttcat 7433609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 206 - 391
Target Start/End: Original strand, 26144234 - 26144422
Alignment:
Q  206 gcatgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattt 305  Q
    ||||||||||||| ||||| | ||||||| |||||||||||||||||||||||||||||||||||||||  |||||||| |||||| |||||||||||||    
T  26144234 gcatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattt 26144333  T
Q  306 acaaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    | ||||||||||||||||||||| ||||||||||||| || |||   |||||||||||||||||  |||||||||||| | ||||||||    
T  26144334 ataaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 26144422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 214 - 391
Target Start/End: Complemental strand, 32982236 - 32982056
Alignment:
Q  214 ggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaag 313  Q
    ||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||  || ||||| ||||||||||||||| ||||||||||||    
T  32982236 ggttctaccgtatggcgaccccgggcggtcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaag 32982137  T
Q  314 aaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||||||||| |||||||||||||||||| |  |||   |||||||||||||||||| ||| |||||||| | ||||||||    
T  32982136 aaaaatttggacaatctgaaaattgtcacacacaaataggtcttggaattttatttagcactctattgacagattcatctc 32982056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 239 - 391
Target Start/End: Original strand, 3828996 - 3829150
Alignment:
Q  239 cggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattg 338  Q
    ||||||| |||| ||||||||||||||||||||||| ||| |||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||     
T  3828996 cggtcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaaaaagaaaaatttgggcaatctgaaaattt 3829095  T
Q  339 tc--acgcgaaaagtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||  |||| || ||   |||||||||||||| |||||||||||||||||||||||    
T  3829096 tcatacgcaaataggtctggaattttatttagcacactattgacgggttcatctc 3829150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 206 - 391
Target Start/End: Original strand, 35907531 - 35907719
Alignment:
Q  206 gcatgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattt 305  Q
    ||||||||||||  ||||   |||||||  ||||||||||||||||| |||||||||||||||||||||  || ||||||||||||| ||||  ||| ||    
T  35907531 gcatgggcggtttcaccgcccggcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacactt 35907630  T
Q  306 acaaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||||||||||| |||||| |||||||||||| |||| || |||   |||| ||||||||||||| |||| |||||||| |||||||||    
T  35907631 acaaaaagaaaattttgggtaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgagttcatctc 35907719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 238 - 390
Target Start/End: Original strand, 17445324 - 17445479
Alignment:
Q  238 gcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaatt 337  Q
    ||||||||||||||| |||| |||||||||| |||||  |  ||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||    
T  17445324 gcggtcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaatt 17445423  T
Q  338 gtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatct 390  Q
     |||| || |||   |||| ||||||||||||| |||| |||||||||||||||||    
T  17445424 ctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatct 17445479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 236 - 391
Target Start/End: Complemental strand, 321535 - 321377
Alignment:
Q  236 gggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 335  Q
    ||||||||| |||||||||||||||||||||||  ||||  |  ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  321535 gggcggtcgtccgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaaaaagaaaaatttgggcaatctgaaaa 321436  T
Q  336 ttgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    || |||   | |||   |||| ||||||||||||| |||| ||||||||||||||||||    
T  321435 ttctcatatgcaaataggtctcggaattttatttaacacattattgacgggttcatctc 321377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 207 - 333
Target Start/End: Original strand, 23313218 - 23313345
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataattt-ttgcacattcaactcaacccaaaagcccattaacacattt 305  Q
    ||||||||||||||||||||||||| |  ||||||| ||||||||||||| ||| |||| |||||||||  |||||||  |||||  |||||||||||||    
T  23313218 catgggcggttctaccgtatggcgatctcgggcggttgcccgggctcgattgatgatttgttgcacattagactcaacataaaagttcattaacacattt 23313317  T
Q  306 acaaaaagaaaaatttgggcaatctgaa 333  Q
    ||||||||||||||||||||||||||||    
T  23313318 acaaaaagaaaaatttgggcaatctgaa 23313345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 210 - 323
Target Start/End: Complemental strand, 41972458 - 41972346
Alignment:
Q  210 gggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaa 309  Q
    ||||||||| |||||   ||||||| ||||||||||| || ||||||||||||||||||||||||  |  ||||| ||||||| ||||||||| ||||||    
T  41972458 gggcggttccaccgtccagcgaccccgggcggtcgcctgg-ctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacacttacaa 41972360  T
Q  310 aaagaaaaatttgg 323  Q
    ||||||||||||||    
T  41972359 aaagaaaaatttgg 41972346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 342
Target Start/End: Original strand, 33489687 - 33489804
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggc- 325  Q
    |||||||| || ||||||  |||| | | ||||||||||||| |||||  |||||| | ||||||||||||||||| |||| |||||||||||||| ||     
T  33489687 ggcgaccccggacggtcgttcgggattgttcgataatttttgtacattagactcaaactaaaagcccattaacacacttactaaaagaaaaatttgagca 33489786  T
Q  326 -aatctgaaaattgtcac 342  Q
     |||||||||||| ||||    
T  33489787 aaatctgaaaattctcac 33489804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 391
Target Start/End: Original strand, 33489839 - 33489873
Alignment:
Q  357 aattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| |||||||||||||||||||||||    
T  33489839 aattttatttagcacactattgacgggttcatctc 33489873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 391
Target Start/End: Complemental strand, 41972290 - 41972256
Alignment:
Q  357 aattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| |||||||||||||||||||||||    
T  41972290 aattttatttagcacactattgacgggttcatctc 41972256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 44352650 - 44352614
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataat 263  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  44352650 ggcgaccccgggaggtcgcccgggctcgatcgataat 44352614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 207 - 391
Target Start/End: Original strand, 17822 - 18009
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||||||||| ||||||||| | ||| ||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  17822 catgggcggttctaccgtgtggcgaccccgagcgatcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 17921  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||||||||||||||||||||||||||||  | |||   |||||| ||||||||||| |||||||||||| | ||||||||    
T  17922 caaaaagaaaaatttgggcaatctgaaaattgtcacatgtaaataggtcttgaaattttatttagcacactattgacagtttcatctc 18009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 2521 - 2383
Alignment:
Q  68 tcctcaagggtctccgttcctaggctatcctagctgattccggcctcgaattttcactgtttgggagtgtggtgtagcttagcgaccagatctggtggtt 167  Q
    ||||||| |||||| |||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2521 tcctcaatggtctctgttcctaggctatcctagctgatttcgggctcgaattttctctgtttgggagtgtggtgtagcttagcgaccagatctggtggtt 2422  T
Q  168 ttgtaagctgtgaacgcgaatctcggtccaaggttgaag 206  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  2421 ttgtaagctgtgaacgcgaatctcgctccaaggttgaag 2383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 111; Significance: 6e-56; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 206 - 391
Target Start/End: Complemental strand, 480645 - 480457
Alignment:
Q  206 gcatgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattt 305  Q
    ||||||||||||| ||||| | ||||||| |||||||||||||||||||||||||||||||||||||||  |||||||| |||||| |||||||||||||    
T  480645 gcatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattt 480546  T
Q  306 acaaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    | ||||||||||||||||||||| ||||||||||||| || |||   |||||||||||||||||  |||||||||||| | ||||||||    
T  480545 ataaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 480457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 106; Significance: 6e-53; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 207 - 391
Target Start/End: Original strand, 502 - 689
Alignment:
Q  207 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacattta 306  Q
    |||||||||||| ||||| | |||| || |||||||||||||||||||||||||||||||||||||||  |||||||| |||||| ||||||||||||||    
T  502 catgggcggttccaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 601  T
Q  307 caaaaagaaaaatttgggcaatctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
     ||||||||||||||||||||| ||||||||||||| || |||   |||||||||||||||||  |||||||||||| | ||||||||    
T  602 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 227 - 391
Target Start/End: Original strand, 5230 - 5397
Alignment:
Q  227 ggcgaccctgggcggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 326  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||  || ||| | ||||||| ||||||||| |||||||||||||| ||||||||    
T  5230 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 5329  T
Q  327 atctgaaaattgtcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    ||||||||||| ||||  | |||   |||| ||||||||||||| |||||||||||||||||||||||    
T  5330 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 5397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 246 - 391
Target Start/End: Original strand, 52944 - 53092
Alignment:
Q  246 ccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacgcg 345  Q
    |||||||||||||||||||||||||||||  | | |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||  |    
T  52944 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 53043  T
Q  346 aaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
     |||   |||| ||||||||||||| |||||||||||||||||||||||    
T  53044 caaataggtctcggaattttatttagcacactattgacgggttcatctc 53092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 239 - 391
Target Start/End: Original strand, 31492 - 31647
Alignment:
Q  239 cggtcgcccgggctcgatcgataatttttgcacattcaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattg 338  Q
    |||||||||||||||||||||||||||||||||| |  || ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||     
T  31492 cggtcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacacttacaaaaagaaaaatttggacaatctgaaaattc 31591  T
Q  339 tcacgcgaaaa---gtcttggaattttatttaccacactattgacgggttcatctc 391  Q
    |||| || |||   |||| | ||||||||||  |||||||||||| ||||||||||    
T  31592 tcactcgcaaataggtctagtaattttattttgcacactattgacaggttcatctc 31647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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