View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0913_low_32 (Length: 360)

Name: NF0913_low_32
Description: NF0913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0913_low_32
NF0913_low_32
[»] chr8 (25 HSPs)
chr8 (78-160)||(26100145-26100227)
chr8 (74-162)||(32927894-32927982)
chr8 (71-162)||(35494992-35495083)
chr8 (78-162)||(13384653-13384737)
chr8 (87-162)||(38868500-38868575)
chr8 (88-161)||(4662912-4662985)
chr8 (71-162)||(15677807-15677899)
chr8 (88-162)||(44141059-44141133)
chr8 (39-154)||(16972023-16972139)
chr8 (74-154)||(32736472-32736552)
chr8 (78-162)||(37684407-37684491)
chr8 (74-134)||(38335856-38335916)
chr8 (75-134)||(38868773-38868832)
chr8 (74-122)||(5859058-5859106)
chr8 (79-162)||(18355850-18355931)
chr8 (71-154)||(30098920-30099001)
chr8 (71-123)||(32681296-32681348)
chr8 (74-162)||(32994237-32994325)
chr8 (91-142)||(8245386-8245437)
chr8 (77-134)||(6027047-6027104)
chr8 (71-128)||(7601943-7601999)
chr8 (81-122)||(24868986-24869027)
chr8 (97-134)||(40769385-40769422)
chr8 (125-162)||(41318825-41318862)
chr8 (89-125)||(39753943-39753979)
[»] chr3 (14 HSPs)
chr3 (75-152)||(32523336-32523413)
chr3 (78-143)||(4526153-4526218)
chr3 (74-143)||(31708234-31708303)
chr3 (74-134)||(33792000-33792061)
chr3 (98-162)||(25359593-25359657)
chr3 (86-134)||(50550604-50550652)
chr3 (71-134)||(46853526-46853589)
chr3 (78-160)||(52364055-52364137)
chr3 (73-134)||(54173309-54173370)
chr3 (74-122)||(41596144-41596192)
chr3 (90-153)||(49356404-49356467)
chr3 (52-122)||(37703141-37703211)
chr3 (76-128)||(35253464-35253516)
chr3 (74-134)||(51285600-51285660)
[»] chr1 (32 HSPs)
chr1 (81-162)||(7790644-7790725)
chr1 (78-154)||(7524123-7524199)
chr1 (74-162)||(11049252-11049340)
chr1 (74-161)||(1514346-1514433)
chr1 (71-162)||(28083880-28083971)
chr1 (74-162)||(30557506-30557592)
chr1 (74-154)||(3909871-3909951)
chr1 (77-162)||(6021806-6021891)
chr1 (74-162)||(3016164-3016252)
chr1 (87-151)||(3416093-3416157)
chr1 (74-162)||(30850394-30850482)
chr1 (94-154)||(34721855-34721915)
chr1 (71-154)||(44801595-44801678)
chr1 (78-159)||(10324937-10325018)
chr1 (74-160)||(32370026-32370112)
chr1 (96-134)||(34387710-34387748)
chr1 (72-134)||(47321900-47321962)
chr1 (74-134)||(213532-213592)
chr1 (74-153)||(29988312-29988391)
chr1 (96-134)||(2277706-2277744)
chr1 (74-135)||(47053435-47053494)
chr1 (87-125)||(47411713-47411751)
chr1 (89-134)||(17284126-17284171)
chr1 (102-162)||(33693022-33693083)
chr1 (81-122)||(38797631-38797672)
chr1 (107-160)||(51500862-51500915)
chr1 (86-134)||(14334070-14334118)
chr1 (75-127)||(24587949-24588001)
chr1 (74-134)||(34915096-34915156)
chr1 (81-153)||(40043426-40043497)
chr1 (74-122)||(43959637-43959685)
chr1 (94-162)||(50571286-50571354)
[»] chr5 (20 HSPs)
chr5 (74-162)||(6951300-6951388)
chr5 (74-154)||(42858118-42858198)
chr5 (71-162)||(38845445-38845537)
chr5 (74-162)||(9818736-9818825)
chr5 (86-154)||(24306103-24306171)
chr5 (86-154)||(24367145-24367213)
chr5 (81-151)||(28110440-28110510)
chr5 (75-162)||(27374290-27374374)
chr5 (75-123)||(10898762-10898810)
chr5 (94-162)||(14299332-14299400)
chr5 (74-154)||(31906269-31906349)
chr5 (74-162)||(11648084-11648170)
chr5 (87-162)||(13171768-13171844)
chr5 (86-154)||(22572411-22572479)
chr5 (74-162)||(28031169-28031256)
chr5 (111-162)||(3738140-3738191)
chr5 (76-134)||(35108269-35108327)
chr5 (89-122)||(15955365-15955398)
chr5 (87-134)||(18637314-18637359)
chr5 (94-162)||(22226251-22226319)
[»] chr7 (10 HSPs)
chr7 (74-159)||(40491583-40491668)
chr7 (75-162)||(41386811-41386898)
chr7 (74-162)||(38123661-38123749)
chr7 (74-134)||(45557395-45557455)
chr7 (88-134)||(45997717-45997764)
chr7 (78-144)||(22195884-22195950)
chr7 (78-162)||(27571864-27571948)
chr7 (90-134)||(30182307-30182351)
chr7 (71-131)||(42344682-42344742)
chr7 (74-134)||(42816463-42816523)
[»] chr4 (31 HSPs)
chr4 (74-162)||(32818365-32818453)
chr4 (74-162)||(8604617-8604705)
chr4 (94-162)||(30357514-30357582)
chr4 (74-164)||(16551957-16552045)
chr4 (66-129)||(39386668-39386731)
chr4 (74-145)||(45011893-45011964)
chr4 (87-161)||(49138771-49138845)
chr4 (71-144)||(21691204-21691277)
chr4 (76-161)||(33347167-33347252)
chr4 (78-134)||(10185224-10185280)
chr4 (74-134)||(35065093-35065153)
chr4 (87-162)||(30889789-30889864)
chr4 (72-122)||(29114755-29114805)
chr4 (88-162)||(50061637-50061711)
chr4 (74-143)||(41751267-41751336)
chr4 (86-131)||(53913584-53913629)
chr4 (78-134)||(4243417-4243473)
chr4 (71-131)||(26181273-26181333)
chr4 (87-154)||(27967431-27967498)
chr4 (79-162)||(52965854-52965937)
chr4 (74-128)||(26911802-26911856)
chr4 (72-134)||(33844007-33844069)
chr4 (87-148)||(47297985-47298045)
chr4 (94-162)||(55186979-55187045)
chr4 (98-162)||(1048719-1048783)
chr4 (78-162)||(9064233-9064317)
chr4 (98-154)||(26911424-26911479)
chr4 (102-162)||(30357649-30357709)
chr4 (98-134)||(34759506-34759542)
chr4 (74-134)||(45694644-45694704)
chr4 (74-154)||(53713556-53713636)
[»] chr6 (21 HSPs)
chr6 (75-162)||(5724626-5724713)
chr6 (78-162)||(4910910-4910994)
chr6 (74-134)||(17225882-17225942)
chr6 (74-131)||(852565-852622)
chr6 (72-144)||(34910967-34911037)
chr6 (74-154)||(3482056-3482136)
chr6 (86-162)||(25195852-25195928)
chr6 (78-154)||(26280615-26280691)
chr6 (71-134)||(9505800-9505863)
chr6 (71-134)||(34027409-34027472)
chr6 (94-147)||(19601460-19601513)
chr6 (74-134)||(957618-957678)
chr6 (78-134)||(1485145-1485201)
chr6 (78-134)||(6653844-6653900)
chr6 (74-162)||(6895945-6896033)
chr6 (94-161)||(6654105-6654172)
chr6 (78-145)||(25195365-25195432)
chr6 (71-134)||(31305839-31305902)
chr6 (95-161)||(7952725-7952791)
chr6 (74-131)||(882719-882776)
chr6 (78-162)||(16540109-16540193)
[»] chr2 (16 HSPs)
chr2 (79-143)||(33502258-33502322)
chr2 (74-151)||(11504057-11504133)
chr2 (102-162)||(2002718-2002778)
chr2 (71-143)||(32596012-32596084)
chr2 (74-154)||(33019151-33019231)
chr2 (78-162)||(42740979-42741063)
chr2 (74-162)||(42982546-42982634)
chr2 (78-133)||(11759858-11759913)
chr2 (75-144)||(8800694-8800763)
chr2 (98-134)||(3352106-3352142)
chr2 (74-162)||(16518781-16518868)
chr2 (86-162)||(31453385-31453461)
chr2 (78-134)||(44439284-44439340)
chr2 (76-134)||(33961978-33962036)
chr2 (76-153)||(13912798-13912875)
chr2 (74-130)||(37541331-37541387)
[»] scaffold0361 (1 HSPs)
scaffold0361 (74-131)||(14109-14166)


Alignment Details
Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 26100145 - 26100227
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaa 160  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||  ||||||||||| |||||| |||||    
T  26100145 atgtaaaagtgagttgaaccataaatttgtgtgtaaaaatcaattatagaatcaaaagctacaaatcctagcttcaaatagaa 26100227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 162
Target Start/End: Complemental strand, 32927982 - 32927894
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| |||| || ||||||||  ||||||||||| |||||| |||||||    
T  32927982 attcatgtaaaagtgagttgaactataaatttgtgtgtaaaaatgaattctataatcaaaagctacaaatcctagcttcaagtagaatc 32927894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 35495083 - 35494992
Alignment:
Q  71 tatattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||||||||||||| || |||| ||||||| ||||||||||||||| ||||| |||||||||||  ||||||||||| |||||  |||||||    
T  35495083 tatattcatgtaaaagtaagttgaactatagatttgtgtgtaaaaaacaattctagaatcaaaagctacaaatcctagcttcatgtagaatc 35494992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 13384653 - 13384737
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||| ||||||| |||||||||||||||||| |||||||||| |||||||||||  |||||||  || |||||| |||||||    
T  13384653 atgtaaaagtgagttgaactataaatttgtgtgtgaaaatcaattctagaatcaaaagctacaaattttagcttcaaatagaatc 13384737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 38868575 - 38868500
Alignment:
Q  87 tgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||||| |||||||||||||||||| |||||||||||||||| |||||  |||||||| || |||||| |||||||    
T  38868575 tgagttgaactataaatttgtgtgtgaaaatcaattatagaaccaaaagctacaaatcttagcttcaagtagaatc 38868500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 4662912 - 4662985
Alignment:
Q  88 gagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaat 161  Q
    ||||| ||||||| ||||||||||||||||||||| ||||| |||||  ||||||||||| |||||| ||||||    
T  4662912 gagttgaactatacatttgtgtgtaaaaatcaattctagaaacaaaagctacaaatcctagcttcaagtagaat 4662985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 15677807 - 15677899
Alignment:
Q  71 tatattcatgtaaacgtgagttaaactataaatttgtgtgt-aaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||||||||||||   |||||| |||||||||||||||||| ||||||||||| || ||||||||  || |||||||| |||||| |||||||    
T  15677807 tatattcatgtaacaatgagttgaactataaatttgtgtgtaaaaaatcaattctataatcaaaagctataaatcctagcttcaagtagaatc 15677899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 88 - 162
Target Start/End: Original strand, 44141059 - 44141133
Alignment:
Q  88 gagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||| ||||||||| || ||||| |||||||| | |||||||||||  |||||||||||||||||| |||||||    
T  44141059 gagttgaactataaaattatgtgtgaaaatcaactctagaatcaaaaactacaaatcctaacttcaagtagaatc 44141133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 154
Target Start/End: Original strand, 16972023 - 16972139
Alignment:
Q  39 agtgagatgaaagtaaaatgatttttgtta-attatattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgt 137  Q
    |||||| |||| |||||||||||| ||||  | || ||||||||||| |||| || ||| |||||||||||| |||||||||||| || ||| ||||  |    
T  16972023 agtgagttgaaggtaaaatgatttgtgtttgaatacattcatgtaaaagtgatttgaacaataaatttgtgtttaaaaatcaattctaaaattaaaaact 16972122  T
Q  138 acaaatcctaacttcaa 154  Q
    |||||| ||| ||||||    
T  16972123 acaaattctagcttcaa 16972139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 32736552 - 32736472
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaa 154  Q
    ||||||||||| |||| || |||||||||||||||||||||||| |||| || ||| ||||  |||||||| ||| |||||    
T  32736552 attcatgtaaaagtgaattgaactataaatttgtgtgtaaaaattaattttaaaataaaaaactacaaatcttaatttcaa 32736472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 37684491 - 37684407
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||| ||||||| || ||||||||| ||  | |||||||||| |||||||||||   ||||||||||||||||| |||||||    
T  37684491 atgtaaaagtgagttgaattataaatttttgcattaaaatcaattttagaatcaaaagccacaaatcctaacttcaagtagaatc 37684407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 38335856 - 38335916
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    ||||||||||| |||||||| | |||||||||||| ||||||||||||| || ||||||||    
T  38335856 attcatgtaaaagtgagttagaatataaatttgtgcgtaaaaatcaattctaaaatcaaaa 38335916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 38868832 - 38868773
Alignment:
Q  75 ttcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    |||||||||| ||||||  ||||||||||||||| || ||||||||||||||||| ||||    
T  38868832 ttcatgtaaaagtgagtagaactataaatttgtgcgtgaaaatcaattatagaataaaaa 38868773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 5859058 - 5859106
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaatt 122  Q
    ||||||||||| ||||||| ||| ||||| |||||||||||||||||||    
T  5859058 attcatgtaaaagtgagttgaaccataaaattgtgtgtaaaaatcaatt 5859106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 18355850 - 18355931
Alignment:
Q  79 tgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||||| | ||||| |||| ||||||||||  |||||||||||| |||||||||||   |||||||||| ||||||| ||||||    
T  18355850 tgtaaaagggagttgaactttaaatttgtg--taaaaatcaattttagaatcaaaagacacaaatcctagcttcaatcagaatc 18355931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 154
Target Start/End: Complemental strand, 30099001 - 30098920
Alignment:
Q  71 tatattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaa 154  Q
    |||||| ||||||| |||||||||||||||||||  | ||||||||| |||| ||||||| |||  ||||||| ||| ||||||    
T  30099001 tatatttatgtaaaagtgagttaaactataaatt--tttgtaaaaattaattctagaatcgaaagctacaaattctagcttcaa 30098920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 32681296 - 32681348
Alignment:
Q  71 tatattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaatta 123  Q
    |||||| ||||||| ||||||| || ||||||||||||| |||||||||||||    
T  32681296 tatattgatgtaaaagtgagttgaattataaatttgtgtttaaaaatcaatta 32681348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 32994237 - 32994325
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||||||| || | ||  ||||||||||||||| |||||||||||| |||| ||||||  || ||||| || |||||| |||||||    
T  32994237 attcatgtaaaagtcatttgcactataaatttgtgtataaaaatcaattctagactcaaaagctagaaatcatagcttcaagtagaatc 32994325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 8245437 - 8245386
Alignment:
Q  91 ttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaa 142  Q
    ||||||||||||||||||| ||| | |||||| |||||||||||| ||||||    
T  8245437 ttaaactataaatttgtgtataacagtcaattctagaatcaaaatctacaaa 8245386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 6027047 - 6027104
Alignment:
Q  77 catgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    ||||||||  ||||||||||| ||||||||| | | |||||||||| |||||||||||    
T  6027047 catgtaaaaatgagttaaactgtaaatttgtatatgaaaatcaattctagaatcaaaa 6027104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 128
Target Start/End: Original strand, 7601943 - 7601999
Alignment:
Q  71 tatattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaa 128  Q
    |||||||||| |||  |||||| ||||| |||||||||| ||||||||||||||||||    
T  7601943 tatattcatgaaaaaatgagttgaacta-aaatttgtgtttaaaaatcaattatagaa 7601999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 24869027 - 24868986
Alignment:
Q  81 taaacgtgagttaaactataaatttgtgtgtaaaaatcaatt 122  Q
    |||| |||||||||||||||||||| |||||| |||||||||    
T  24869027 taaaagtgagttaaactataaatttatgtgtagaaatcaatt 24868986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 134
Target Start/End: Original strand, 40769385 - 40769422
Alignment:
Q  97 tataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  40769385 tataaatttgtgtgtgaaaatcaattatagaataaaaa 40769422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 41318825 - 41318862
Alignment:
Q  125 agaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  41318825 agaatcaaaatgtacaaattctaacttcaagtagaatc 41318862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 39753979 - 39753943
Alignment:
Q  89 agttaaactataaatttgtgtgtaaaaatcaattata 125  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  39753979 agttaaactataaatttgtgtgtgaaaaacaattata 39753943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 6e-22; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 32523336 - 32523413
Alignment:
Q  75 ttcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttc 152  Q
    |||||||| | |||||||||||| |||||||||||||||||||||||| |||||||||||  ||||||||||||||||    
T  32523336 ttcatgtataagtgagttaaactctaaatttgtgtgtaaaaatcaattttagaatcaaaagctacaaatcctaacttc 32523413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 4526218 - 4526153
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaat 143  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||||| || ||||||||  |||||||    
T  4526218 atgtaaaagtgtgttgaactataaatttgtgtgtaaaaatcaattttaaaatcaaaagttacaaat 4526153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 143
Target Start/End: Original strand, 31708234 - 31708303
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaat 143  Q
    ||||||||||| ||||||| || ||||||||||||||| | |||||||| |||||||||||  |||||||    
T  31708234 attcatgtaaaagtgagttgaattataaatttgtgtgttagaatcaattctagaatcaaaagctacaaat 31708303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 33792000 - 33792061
Alignment:
Q  74 attcatgtaaacgtgagtt-aaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    ||||||||||| ||||||| |||| |||||||| ||||||||||||||||||| ||||||||    
T  33792000 attcatgtaaaagtgagtttaaacaataaatttatgtgtaaaaatcaattataaaatcaaaa 33792061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 25359593 - 25359657
Alignment:
Q  98 ataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||||| ||||||| ||||||||||||||||| ||||  ||||||| |||||||||| |||||||    
T  25359593 ataaatatgtgtgtgaaaatcaattatagaataaaaaactacaaattctaacttcaagtagaatc 25359657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 50550652 - 50550604
Alignment:
Q  86 gtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    |||||| ||||||||||||||||||| |||||||||| |||||||||||    
T  50550652 gtgagtcaaactataaatttgtgtgtgaaaatcaattttagaatcaaaa 50550604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 46853526 - 46853589
Alignment:
Q  71 tatattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    |||||| ||||||| ||||||| ||| ||||||||| |||| |||||||||| |||||||||||    
T  46853526 tatatttatgtaaaagtgagttgaacaataaatttgagtgttaaaatcaattctagaatcaaaa 46853589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 52364137 - 52364055
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaa 160  Q
    ||||||| ||||||| |||| ||||||| ||| | ||||||||||||||||||||||  || ||||| || |||||| |||||    
T  52364137 atgtaaaagtgagttgaactgtaaatttatgtttgaaaatcaattatagaatcaaaagctataaatcatagcttcaagtagaa 52364055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 54173309 - 54173370
Alignment:
Q  73 tattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    |||| ||||||| ||||||| |||||||||||| | ||||||||| ||||||||||| ||||    
T  54173309 tatttatgtaaaagtgagttgaactataaatttatttgtaaaaattaattatagaataaaaa 54173370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 41596144 - 41596192
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaatt 122  Q
    ||||||| ||| |||||| |||||||||| |||||||||||||||||||    
T  41596144 attcatggaaaagtgagtcaaactataaacttgtgtgtaaaaatcaatt 41596192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 49356404 - 49356467
Alignment:
Q  90 gttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttca 153  Q
    ||||||| |||||||| | |||||||||||||||||||||| |||  ||||||| ||| |||||    
T  49356404 gttaaaccataaatttatttgtaaaaatcaattatagaatctaaagttacaaatactaccttca 49356467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 37703211 - 37703141
Alignment:
Q  52 taaaatgatttttgttaattatattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaatt 122  Q
    |||||||||||  ||||| |||||| ||||||| |||| || ||| ||||||||| |||||||||| ||||    
T  37703211 taaaatgatttaagttaaatatatttatgtaaaagtgaattgaacaataaatttgagtgtaaaaattaatt 37703141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 35253464 - 35253516
Alignment:
Q  76 tcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaa 128  Q
    ||||||||| ||||||| ||  ||||||||| ||||||||||||||| |||||    
T  35253464 tcatgtaaaagtgagttgaatgataaatttgagtgtaaaaatcaattctagaa 35253516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 51285660 - 51285600
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    ||||||||||| | | ||||||| | ||||||| ||| ||||||||||| |||||||||||    
T  51285660 attcatgtaaaagcgggttaaacaacaaatttgagtgcaaaaatcaattctagaatcaaaa 51285600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 6e-22; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 7790644 - 7790725
Alignment:
Q  81 taaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||| ||||||| ||| ||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| |||||||    
T  7790644 taaaagtgagttgaacaataaatttgtgtgtaaaaatcaattatagaatctaaatctacaaatcataacttcaagtagaatc 7790725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 7524199 - 7524123
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaa 154  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||||  ||||||||||||||||||    
T  7524199 atgtaaaagtgagttgaactataaatttgtgtgtaaaaatcaattctataatcaaaagctacaaatcctaacttcaa 7524123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 162
Target Start/End: Complemental strand, 11049340 - 11049252
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||| ||||| |||| || ||||||||||||||||||||||||||||| |||||||||||  ||||||||||| |||||| |||||||    
T  11049340 attcacgtaaaagtgacttgaactataaatttgtgtgtaaaaatcaattttagaatcaaaagctacaaatcctagcttcaagtagaatc 11049252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 161
Target Start/End: Complemental strand, 1514433 - 1514346
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaat 161  Q
    |||||||||||  |||||| ||| |||||||||||||||||||||||||||| ||| ||||  ||||||||||| |||||| ||||||    
T  1514433 attcatgtaaaaatgagttgaacaataaatttgtgtgtaaaaatcaattatataataaaaagctacaaatcctagcttcaagtagaat 1514346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 28083880 - 28083971
Alignment:
Q  71 tatattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||||||||||||| ||||| | ||||  |||||||||||||||||| ||||||||||||||||  ||||||| ||| |||||| |||||||    
T  28083880 tatattcatgtaaaagtgagctgaacttgaaatttgtgtgtaaaaattaattatagaatcaaaagctacaaattctagcttcaagtagaatc 28083971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 74 - 162
Target Start/End: Complemental strand, 30557592 - 30557506
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||||| |||| ||||||| |||||||||||||||||  |||||||||| |||||||||||  ||||||||||| |||||| |||||||    
T  30557592 attcatataaaagtgagttgaactataaatttgtgtg--aaaatcaattctagaatcaaaaactacaaatcctagcttcaactagaatc 30557506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 3909951 - 3909871
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaa 154  Q
    |||| ||||||||||||||||| ||| ||||||||||| |||||||||| || ||| ||||| |||| |||||||||||||    
T  3909951 attcgtgtaaacgtgagttaaagtatgaatttgtgtgtgaaaatcaattctataatgaaaatctacatatcctaacttcaa 3909871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 6021891 - 6021806
Alignment:
Q  77 catgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||||||| ||||||| ||| ||||| ||| ||||||||||| |||||||||||||||  |||| |||||| |||||| |||||||    
T  6021891 catgtaaaagtgagttgaaccataaacttgagtgtaaaaatctattatagaatcaaaagctacatatcctagcttcaagtagaatc 6021806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 162
Target Start/End: Complemental strand, 3016252 - 3016164
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||||||| ||||||| |||  ||||||| |||||||| ||||||| |||||||||||  ||||||| |||| ||||| |||||||    
T  3016252 attcatgtaaaagtgagttgaaccgtaaatttatgtgtaaacatcaattctagaatcaaaagctacaaattctaagttcaagtagaatc 3016164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 3416157 - 3416093
Alignment:
Q  87 tgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaactt 151  Q
    |||||||||||||||||||||||||||||||||||| || ||| ||||  |||||||| ||||||    
T  3416157 tgagttaaactataaatttgtgtgtaaaaatcaattctaaaataaaaaactacaaatcttaactt 3416093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 30850394 - 30850482
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||||||| ||||||| |||||||||||||| ||| |||||||||| || ||| ||||  |||||||||||  ||||| |||||||    
T  30850394 attcatgtaaaagtgagttgaactataaatttgtatgttaaaatcaattctaaaattaaaaactacaaatcctagtttcaagtagaatc 30850482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 34721855 - 34721915
Alignment:
Q  94 aactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaa 154  Q
    |||||||||||||||||| ||||||||||||||||| ||||   |||||||||||||||||    
T  34721855 aactataaatttgtgtgtgaaaatcaattatagaataaaaaacaacaaatcctaacttcaa 34721915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 154
Target Start/End: Complemental strand, 44801678 - 44801595
Alignment:
Q  71 tatattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaa 154  Q
    |||||||||||||| ||||||| |  |||||||||| | |||||||| |||| |||||| ||||  ||||||||||||||||||    
T  44801678 tatattcatgtaaaagtgagttgagatataaatttgcgcgtaaaaattaattttagaataaaaaactacaaatcctaacttcaa 44801595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 10324937 - 10325018
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattaga 159  Q
    ||||||| ||||||  ||| ||||||||| |||||||||||||||||||||||||||  ||||| | ||| |||||| ||||    
T  10324937 atgtaaaagtgagtataacaataaatttgagtgtaaaaatcaattatagaatcaaaagctacaatttctatcttcaagtaga 10325018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 160
Target Start/End: Original strand, 32370026 - 32370112
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaa 160  Q
    ||||||||||| |  |||| || ||||||||||||||||||||  |||| |||||| ||||  ||||||| |||||||||| |||||    
T  32370026 attcatgtaaaagcaagttcaattataaatttgtgtgtaaaaaataattctagaataaaaaattacaaattctaacttcaagtagaa 32370112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 34387710 - 34387748
Alignment:
Q  96 ctataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  34387710 ctataaatttgtgtgtgaaaatcaattatagaatcaaaa 34387748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 134
Target Start/End: Original strand, 47321900 - 47321962
Alignment:
Q  72 atattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    ||||||||||||| |||| || |||||||||||||||| | |||||||||| |||||| ||||    
T  47321900 atattcatgtaaaagtgaattgaactataaatttgtgtatgaaaatcaattctagaattaaaa 47321962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 213532 - 213592
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    ||||||||||| ||||||| ||| | ||||||| || |||||||||||| |||||||||||    
T  213532 attcatgtaaaagtgagttgaacaacaaatttgagtttaaaaatcaattctagaatcaaaa 213592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 29988391 - 29988312
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttca 153  Q
    ||||||||||| ||||||| ||  |||| ||||| ||||||| | |||| |||||| ||||  |||||||||||||||||    
T  29988391 attcatgtaaaggtgagttcaaacataagtttgtttgtaaaagttaattctagaattaaaagttacaaatcctaacttca 29988312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 2277706 - 2277744
Alignment:
Q  96 ctataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  2277706 ctataaatttgtgtgtaaaactcaattatagaattaaaa 2277744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 47053494 - 47053435
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaat 135  Q
    ||||||||||| |||||||||||||||||  || |||||||| |||||| |||||| |||||    
T  47053494 attcatgtaaaagtgagttaaactataaa--tgagtgtaaaattcaattctagaataaaaat 47053435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 125
Target Start/End: Original strand, 47411713 - 47411751
Alignment:
Q  87 tgagttaaactataaatttgtgtgtaaaaatcaattata 125  Q
    |||||| |||||||||||||| |||||||||||||||||    
T  47411713 tgagtttaactataaatttgtttgtaaaaatcaattata 47411751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 17284171 - 17284126
Alignment:
Q  89 agttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    |||| ||| ||||||||| ||||||||||||||| |||||||||||    
T  17284171 agttgaacaataaatttgagtgtaaaaatcaattttagaatcaaaa 17284126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 33693083 - 33693022
Alignment:
Q  102 atttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaa-ttagaatc 162  Q
    ||||| |||||||||||||||||||||||||||  ||||| | ||| |||||| ||||||||    
T  33693083 atttgagtgtaaaaatcaattatagaatcaaaagctacaatttctagcttcaagttagaatc 33693022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 38797631 - 38797672
Alignment:
Q  81 taaacgtgagttaaactataaatttgtgtgtaaaaatcaatt 122  Q
    |||| ||||||| |||||||||||||||||| ||||||||||    
T  38797631 taaaagtgagttgaactataaatttgtgtgtgaaaatcaatt 38797672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 51500862 - 51500915
Alignment:
Q  107 tgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaa 160  Q
    |||||||||||||||| |||||||||||  |||||||||||  ||||| |||||    
T  51500862 tgtgtaaaaatcaattctagaatcaaaagctacaaatcctaggttcaagtagaa 51500915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 14334070 - 14334118
Alignment:
Q  86 gtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    ||||||| |||||||||||||||| | ||||||||||||| | ||||||    
T  14334070 gtgagtttaactataaatttgtgtatgaaaatcaattatatattcaaaa 14334118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 24588001 - 24587949
Alignment:
Q  75 ttcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattataga 127  Q
    |||||||||| ||||||| ||  ||||||||| |||| |||||||||||||||    
T  24588001 ttcatgtaaaagtgagttgaataataaatttgagtgttaaaatcaattataga 24587949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 34915156 - 34915096
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    ||||||||||| ||||||| || |||||| | |||||| | |||||||| |||||||||||    
T  34915156 attcatgtaaaagtgagttgaattataaaatggtgtgttagaatcaattctagaatcaaaa 34915096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 40043426 - 40043497
Alignment:
Q  81 taaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttca 153  Q
    |||||||||||  ||||| |||||||||||| ||||||||||||  || |||||  ||||||| |||||||||    
T  40043426 taaacgtgagtagaactaaaaatttgtgtgtgaaaatcaattat-taaacaaaaattacaaattctaacttca 40043497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 43959685 - 43959637
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaatt 122  Q
    ||||| |||||| |||||||||| ||||||||| || ||||||||||||    
T  43959685 attcacgtaaacatgagttaaacaataaatttgagtctaaaaatcaatt 43959637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 50571354 - 50571286
Alignment:
Q  94 aactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||||||| ||||||| | || |||| || |||||| ||||  |||||||||||||||||| |||||||    
T  50571354 aactataactttgtgtctgaacatcagttctagaataaaaaactacaaatcctaacttcaagtagaatc 50571286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 6951300 - 6951388
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||||||| |||| || || ||||||||| |||||| |||||||||||||||||||||  |||||||||||||||||| |||||||    
T  6951300 attcatgtaaaagtgaattgaattataaatttatgtgtacaaatcaattatagaatcaaaagctacaaatcctaacttcaagtagaatc 6951388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 42858198 - 42858118
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaa 154  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||| ||||  | ||||||||||||||||    
T  42858198 attcatgtaaaagtgagttgaactataaatttgtgtgtgaaaatcaattatagaattaaaagctccaaatcctaacttcaa 42858118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 38845537 - 38845445
Alignment:
Q  71 tatattcatgtaaac-gtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||||||||||  ||||||| ||||||| |||||||||| |||||||||| |||||||||||  |||||||| || |||||| |||||||    
T  38845537 tatattcatgtaaaaagtgagtttaactatatatttgtgtgtgaaaatcaattctagaatcaaaaactacaaatcttagcttcaagtagaatc 38845445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 74 - 162
Target Start/End: Complemental strand, 9818825 - 9818736
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaa-tcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||||| |||| ||||||| |||||||||||||||| |||||| |||||| |||||||||||  |||||||| || |||||| |||||||    
T  9818825 attcatataaaagtgagttgaactataaatttgtgtttaaaaaatcaattctagaatcaaaagctacaaatcatagcttcaagtagaatc 9818736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 24306103 - 24306171
Alignment:
Q  86 gtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaa 154  Q
    |||| |||||| ||||||||| |||||||||||||||||||||||||||  ||||| | ||||||||||    
T  24306103 gtgatttaaacaataaatttgagtgtaaaaatcaattatagaatcaaaagttacaatttctaacttcaa 24306171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 24367213 - 24367145
Alignment:
Q  86 gtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaa 154  Q
    |||| |||||| ||||||||| |||||||||||||||||||||||||||  ||||| | ||||||||||    
T  24367213 gtgatttaaacaataaatttgagtgtaaaaatcaattatagaatcaaaagttacaatttctaacttcaa 24367145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 28110440 - 28110510
Alignment:
Q  81 taaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaactt 151  Q
    |||| ||||||| |||||||||||||||||| |||||||||| || ||||||||  ||||||||| |||||    
T  28110440 taaaagtgagttcaactataaatttgtgtgtgaaaatcaattctaaaatcaaaagttacaaatcccaactt 28110510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 162
Target Start/End: Original strand, 27374290 - 27374374
Alignment:
Q  75 ttcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||||||||| |||||||||||  ||||||||| ||||||||||||||||  ||| ||    |||||||||||||||||| |||||||    
T  27374290 ttcatgtaaatgtgagttaaaccgtaaatttgtatgtaaaaatcaattatgaaatgaa---ttacaaatcctaacttcaagtagaatc 27374374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 10898810 - 10898762
Alignment:
Q  75 ttcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaatta 123  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  10898810 ttcatgtaaaagtgagttgaacaataaatttgtgtgtaaaaatcaatta 10898762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 14299400 - 14299332
Alignment:
Q  94 aactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||||||||||| ||||| |||| ||||| |||||| ||||  |||||||||||||||||| |||||||    
T  14299400 aactataaatttatgtgtgaaaaccaattctagaataaaaaactacaaatcctaacttcaagtagaatc 14299332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 31906349 - 31906269
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaa 154  Q
    ||||||||||| ||||||| |||||||||||| | || ||| |||||||||| ||||||||  |||||||| || ||||||    
T  31906349 attcatgtaaaagtgagttgaactataaatttatatgaaaatatcaattatataatcaaaagttacaaatcatagcttcaa 31906269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 162
Target Start/End: Complemental strand, 11648170 - 11648084
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||||||||||  |||||| || ||||  || |||||| |||||||||| || |||||||||||||||||| || |||||| |||||||    
T  11648170 attcatgtaaaattgagttgaattata--ttcgtgtgtgaaaatcaattttataatcaaaatgtacaaatcttagcttcaagtagaatc 11648084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 13171768 - 13171844
Alignment:
Q  87 tgagttaaactataaatttgtgtgt-aaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||||| |||||||||||| ||| | |||||||| ||||||||||||||| |||||||| |  |||||| |||||||    
T  13171768 tgagtttaactataaatttttgtatgaaaaatcatttatagaatcaaaatttacaaatcttttcttcaagtagaatc 13171844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 22572411 - 22572479
Alignment:
Q  86 gtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaa 154  Q
    |||||||||||||||||||||| | ||||| |||||| || ||||||||  ||||||||| | ||||||    
T  22572411 gtgagttaaactataaatttgtttataaaattcaattctataatcaaaagctacaaatcccagcttcaa 22572479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 28031169 - 28031256
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||||||| || |||| | |||||||||||||| ||||| ||||||||| ||||||||  || ||||  ||||||||| |||||||    
T  28031169 attcatgtaaaagtaagttgatctataaatttgtgt-taaaagtcaattatataatcaaaaaatataaattttaacttcaaatagaatc 28031256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 3738140 - 3738191
Alignment:
Q  111 taaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||||||||||||||||||||  ||||| | |||||||||| |||||||    
T  3738140 taaaaatcaattatagaatcaaaaactacaacttctaacttcaactagaatc 3738191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 35108327 - 35108269
Alignment:
Q  76 tcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    ||||||||| ||| ||| ||||||||||||| |||||||||||| || || ||||||||    
T  35108327 tcatgtaaatgtgtgttgaactataaatttgcgtgtaaaaatcagttttaaaatcaaaa 35108269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 15955365 - 15955398
Alignment:
Q  89 agttaaactataaatttgtgtgtaaaaatcaatt 122  Q
    ||||||| ||||||||||||||||||||||||||    
T  15955365 agttaaattataaatttgtgtgtaaaaatcaatt 15955398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 18637359 - 18637314
Alignment:
Q  87 tgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    |||||| ||||||||||  ||||||||||||||||| |||||||||||    
T  18637359 tgagttgaactataaat--gtgtgtaaaaatcaattctagaatcaaaa 18637314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 22226251 - 22226319
Alignment:
Q  94 aactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||| ||||||||||||||||| | |||| || ||||||||  ||||||| ||| |||||| |||||||    
T  22226251 aactctaaatttgtgtgtaaaagttaattctaaaatcaaaagctacaaatactatcttcaagtagaatc 22226319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 40491668 - 40491583
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattaga 159  Q
    ||||||||||| |||||||||||| ||||||||||||||||| |||||| |||||||||||  |||||| | ||||||||| ||||    
T  40491668 attcatgtaaaagtgagttaaactttaaatttgtgtgtaaaagtcaattctagaatcaaaagctacaaaacttaacttcaagtaga 40491583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 75 - 162
Target Start/End: Original strand, 41386811 - 41386898
Alignment:
Q  75 ttcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||||| ||| ||||||| || |||||||||||||||||| ||||||| |||||| ||||  ||||||||||| |||||| |||||||    
T  41386811 ttcatgcaaaagtgagttgaattataaatttgtgtgtaaatatcaattctagaattaaaagctacaaatcctagcttcaagtagaatc 41386898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 38123661 - 38123749
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||||||| ||||||| | | ||||||||| ||||||||||||||| |||||| | ||  ||||| | ||| |||||| |||||||    
T  38123661 attcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatc 38123749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 45557455 - 45557395
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    ||||||||||| ||||||| | ||| ||||||||||||||||||||||  |||||| ||||    
T  45557455 attcatgtaaaagtgagttgagctacaaatttgtgtgtaaaaatcaatcctagaattaaaa 45557395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 134
Target Start/End: Complemental strand, 45997764 - 45997717
Alignment:
Q  88 gagttaaactataaatttgtgt-gtaaaaatcaattatagaatcaaaa 134  Q
    ||||| |||||||||||||||| |||||||| ||||||||||||||||    
T  45997764 gagttgaactataaatttgtgttgtaaaaataaattatagaatcaaaa 45997717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 22195950 - 22195884
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatc 144  Q
    ||||||| |||| ||||||||||||| ||  ||| |||||||||| |||||||||||  ||||||||    
T  22195950 atgtaaaagtgaattaaactataaatatgcatgtgaaaatcaattttagaatcaaaagttacaaatc 22195884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 27571948 - 27571864
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||| ||||||| ||  ||||| ||| |||| |||||||||| |||||||||||  | ||| | |||||||||| |||||||    
T  27571948 atgtaaatgtgagttgaataataaacttgagtgttaaaatcaattctagaatcaaaagctccaatttctaacttcaagtagaatc 27571864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 30182307 - 30182351
Alignment:
Q  90 gttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    ||||||| ||||||||| |||||||||| |||| |||||||||||    
T  30182307 gttaaacaataaatttgagtgtaaaaattaattctagaatcaaaa 30182351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 42344682 - 42344742
Alignment:
Q  71 tatattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatca 131  Q
    |||||||||||||   |||||| ||||  |||||| || ||||||||||||||||||||||    
T  42344682 tatattcatgtaataatgagttgaacttcaaatttatgagtaaaaatcaattatagaatca 42344742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 42816463 - 42816523
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    ||||||||| | |||| || || ||||||||||||||| |||||||||| |||||| ||||    
T  42816463 attcatgtagaagtgaattgaattataaatttgtgtgtgaaaatcaattctagaattaaaa 42816523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 32818365 - 32818453
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||||||| || |||| ||||||||||||||||| ||||||||||| |||||||||||  ||||||| ||| |||||| |||||||    
T  32818365 attcatgtaaaagttagttgaactataaatttgtgtgcaaaaatcaattctagaatcaaaagctacaaattctagcttcaaatagaatc 32818453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 8604617 - 8604705
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||||||| |||  || |||||||||||||||||| |||||||||| ||||||| |||  |||||||| || |||||| |||||||    
T  8604617 attcatgtaaaagtgcattcaactataaatttgtgtgtgaaaatcaattctagaatcgaaagctacaaatcttagcttcaagtagaatc 8604705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 30357582 - 30357514
Alignment:
Q  94 aactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||||||||||||||||||||||||||||||| ||||||||  ||||||||  | |||||| |||||||    
T  30357582 aactataaatttgtgtgtaaaaatcaattatataatcaaaagctacaaatcacagcttcaagtagaatc 30357514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 164
Target Start/End: Complemental strand, 16552045 - 16551957
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatcca 164  Q
    ||||||||||| ||||||| |||||||||||||||||  |||||||||| |||||  ||||  ||||||||||| ||||||  ||||||||    
T  16552045 attcatgtaaaagtgagttgaactataaatttgtgtg--aaaatcaattctagaactaaaaactacaaatcctagcttcaaggagaatcca 16551957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 129
Target Start/End: Complemental strand, 39386731 - 39386668
Alignment:
Q  66 ttaattatattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaat 129  Q
    |||| |||||||||||||| ||||||| |||| ||||| ||||||| |||||||||||||||||    
T  39386731 ttaaatatattcatgtaaaagtgagttgaactttaaatatgtgtgtgaaaatcaattatagaat 39386668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 145
Target Start/End: Complemental strand, 45011964 - 45011893
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcc 145  Q
    |||||| |||| |||||| ||| ||||||||||||||| |||||||||| |||||||||||  |||||||||    
T  45011964 attcatataaaagtgagtaaaattataaatttgtgtgtgaaaatcaattctagaatcaaaagctacaaatcc 45011893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 49138771 - 49138845
Alignment:
Q  87 tgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaat 161  Q
    |||||| ||||||||  |||||| |||||||||||| |||||||||||  ||||||||||| |||||| ||||||    
T  49138771 tgagttgaactataagcttgtgtataaaaatcaattttagaatcaaaagttacaaatcctagcttcaagtagaat 49138845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 21691204 - 21691277
Alignment:
Q  71 tatattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatc 144  Q
    |||||||||||||| ||| ||| |||||||||||||||||| |||||||||| || || |||||  ||||||||    
T  21691204 tatattcatgtaaaagtgtgttgaactataaatttgtgtgtgaaaatcaattctacaaccaaaagctacaaatc 21691277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 33347167 - 33347252
Alignment:
Q  76 tcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaat 161  Q
    ||||||||| |||| || ||||||| ||||||||| |||||| |||||| |||| ||||  ||||||||||| |||||| ||||||    
T  33347167 tcatgtaaaagtgaattgaactatatatttgtgtgcaaaaattaattatcgaataaaaaattacaaatcctaccttcaagtagaat 33347252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 10185280 - 10185224
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    ||||||| ||||||||||| ||||||||| ||||||| ||||||| |||||||||||    
T  10185280 atgtaaaagtgagttaaacaataaatttgagtgtaaagatcaattttagaatcaaaa 10185224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 35065153 - 35065093
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    ||||||||||| ||||||  |  |||||||||||||||||||||||||| |||||||||||    
T  35065153 attcatgtaaaagtgagtggagatataaatttgtgtgtaaaaatcaattctagaatcaaaa 35065093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 30889864 - 30889789
Alignment:
Q  87 tgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||||||||||||||||| | || |||||||||||| || ||||||||| |||||||| ||| | ||| |||||||    
T  30889864 tgagttaaactataaattggagtataaaaatcaattctacaatcaaaatttacaaatcttaattgcaagtagaatc 30889789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 29114805 - 29114755
Alignment:
Q  72 atattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaatt 122  Q
    ||||||||||||| |||||||||||| || |||||| ||||||||||||||    
T  29114805 atattcatgtaaaagtgagttaaactttatatttgtatgtaaaaatcaatt 29114755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 162
Target Start/End: Original strand, 50061637 - 50061711
Alignment:
Q  88 gagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||| ||| ||||| || ||||| |||||||| | |||||||||||  |||||||||||||||||| |||||||    
T  50061637 gagttgaaccataaaattatgtgtgaaaatcaactctagaatcaaaaactacaaatcctaacttcaagtagaatc 50061711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 143
Target Start/End: Original strand, 41751267 - 41751336
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaat 143  Q
    |||||||||||  ||| |||||| ||||||||  || |||||||||||| |||||||||||| |||||||    
T  41751267 attcatgtaaaactgaattaaacaataaatttaagtttaaaaatcaattctagaatcaaaatatacaaat 41751336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 53913584 - 53913629
Alignment:
Q  86 gtgagttaaactataaatttgtgtgtaaaaatcaattatagaatca 131  Q
    ||||||| |||||||||||| ||||| |||||||||||||||||||    
T  53913584 gtgagtttaactataaatttatgtgtgaaaatcaattatagaatca 53913629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 4243473 - 4243417
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    ||||||| ||||||  ||| ||||||||| ||||||||||||||| |||||||||||    
T  4243473 atgtaaaagtgagtagaacaataaatttgagtgtaaaaatcaattctagaatcaaaa 4243417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 26181273 - 26181333
Alignment:
Q  71 tatattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatca 131  Q
    ||||||| |||||| |||||||||||||||||||||| | | ||||| ||| |||||||||    
T  26181273 tatattcttgtaaatgtgagttaaactataaatttgtattttaaaattaatgatagaatca 26181333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 27967431 - 27967498
Alignment:
Q  87 tgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaa 154  Q
    |||||| ||||||||||||||| |||||| |||||||| |||| ||||  || ||||||||| |||||    
T  27967431 tgagttgaactataaatttgtgcgtaaaagtcaattattgaataaaaaattataaatcctaatttcaa 27967498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 52965854 - 52965937
Alignment:
Q  79 tgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||||| ||||||| || ||||||||| ||||| | |||||||| |||||||||||  || ||||  ||||||||| |||||||    
T  52965854 tgtaaaagtgagttgaattataaatttatgtgttagaatcaattttagaatcaaaagctataaatagtaacttcaagtagaatc 52965937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 26911802 - 26911856
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaa 128  Q
    ||||||||||| |||| ||||||||||||||||| |||  ||||||||| |||||    
T  26911802 attcatgtaaaagtgaattaaactataaatttgtatgtggaaatcaattctagaa 26911856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 134
Target Start/End: Complemental strand, 33844069 - 33844007
Alignment:
Q  72 atattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    |||||||||||||  | |||| ||| ||||||||| |||| |||||||||| |||||||||||    
T  33844069 atattcatgtaaaaataagttgaacaataaatttgagtgttaaaatcaattttagaatcaaaa 33844007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 47297985 - 47298045
Alignment:
Q  87 tgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaa 148  Q
    |||||| ||||||| |||| | ||||||||||||||||||||| ||||  ||||||||||||    
T  47297985 tgagttgaactatacatttatatgtaaaaatcaattatagaat-aaaaactacaaatcctaa 47298045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 55186979 - 55187045
Alignment:
Q  94 aactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||||||||| ||||||  |||||||||| || ||| ||||  |||||||||||||||||| |||||||    
T  55186979 aactataaatatgtgtg--aaaatcaattctataattaaaagttacaaatcctaacttcaagtagaatc 55187045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 1048783 - 1048719
Alignment:
Q  98 ataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||||| |||||| ||||||||||||||| ||||  || |||| ||||||| || |||||||    
T  1048783 ataaatttgagtgtaagaatcaattatagaattaaaagctataaattctaactttaagtagaatc 1048719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 9064317 - 9064233
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||| ||||||| |||  |||| ||| |||| |||||||||| |||||||||||  ||||||| |||  ||||| |||||||    
T  9064317 atgtaaaagtgagttgaaccgtaaacttgagtgtgaaaatcaattctagaatcaaaaactacaaattctagtttcaagtagaatc 9064233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 26911424 - 26911479
Alignment:
Q  98 ataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaa 154  Q
    |||||||||  ||||||||||||||||| ||||||||  ||||||| ||||||||||    
T  26911424 ataaatttgaatgtaaaaatcaattatataatcaaaa-ctacaaatactaacttcaa 26911479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 30357709 - 30357649
Alignment:
Q  102 atttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||| ||||||||||| ||||||| ||||||||  |||| ||| || ||||||||||||||    
T  30357709 atttatgtgtaaaaataaattatataatcaaaagctacagatcatagcttcaattagaatc 30357649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 34759506 - 34759542
Alignment:
Q  98 ataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    |||||||  ||||||||||||||||||||||||||||    
T  34759506 ataaattaatgtgtaaaaatcaattatagaatcaaaa 34759542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 45694704 - 45694644
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    |||||||||||  |||||| |||||||||| ||||||| | |||||||| |||||| ||||    
T  45694704 attcatgtaaaaatgagttcaactataaatgtgtgtgttagaatcaattctagaattaaaa 45694644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 53713556 - 53713636
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaa 154  Q
    ||||||||||| ||||||| ||||||| || | | |||  || ||||||||||||||||||  |||||||| || ||||||    
T  53713556 attcatgtaaaagtgagttgaactatatatatttatgtggaagtcaattatagaatcaaaagctacaaatcgtagcttcaa 53713636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 162
Target Start/End: Original strand, 5724626 - 5724713
Alignment:
Q  75 ttcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||| |||| ||||||||||  ||| |||||||||||||||||||||||||||| ||||  ||||||||||| |||||| |||||||    
T  5724626 ttcatataaaagtgagttaaatgatatatttgtgtgtaaaaatcaattatagaataaaaagttacaaatcctagcttcaagtagaatc 5724713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 4910994 - 4910910
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||| ||||||  |||||||||||||| ||| |||||||||| |||||||||||  |||||||| || |||||| |||||||    
T  4910994 atgtaaaagtgagtcgaactataaatttgtatgtgaaaatcaattctagaatcaaaagctacaaatcatagcttcaagtagaatc 4910910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 17225942 - 17225882
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    |||||||||||  |||||| |||||||||||||| |||||||||||||| |||||||||||    
T  17225942 attcatgtaaaactgagttgaactataaatttgtatgtaaaaatcaattctagaatcaaaa 17225882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 852622 - 852565
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatca 131  Q
    ||||||||||| ||||||||||| ||| ||||| ||||||||||||||| ||||||||    
T  852622 attcatgtaaaagtgagttaaacaatacatttgggtgtaaaaatcaattctagaatca 852565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 34911037 - 34910967
Alignment:
Q  72 atattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatc 144  Q
    ||||||||||||| || |||||||||||||  |||||||| |||||||||| |||||||||||  ||||||||    
T  34911037 atattcatgtaaaagttagttaaactataa--ttgtgtgtcaaaatcaattctagaatcaaaagctacaaatc 34910967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 3482136 - 3482056
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaa 154  Q
    ||||||||||| || |||| ||||||||| |||||||| |||||||||| || |||||||   |||||||| |||||||||    
T  3482136 attcatgtaaaagtaagttgaactataaacttgtgtgtgaaaatcaattctaaaatcaaaggctacaaatcttaacttcaa 3482056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 162
Target Start/End: Complemental strand, 25195928 - 25195852
Alignment:
Q  86 gtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||| ||||||||||||||||||| || |||||| |||||||||||  || ||||||||  || ||||||||||    
T  25195928 gtgagttgaactataaatttgtgtgtacaattcaattctagaatcaaaagctataaatcctagttttaattagaatc 25195852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 26280691 - 26280615
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaa 154  Q
    ||||||| ||||||| ||||||||||||||  ||||||||||||| | |||||||||  ||||||| ||| ||||||    
T  26280691 atgtaaaagtgagtttaactataaatttgtacgtaaaaatcaattttggaatcaaaaactacaaattctagcttcaa 26280615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 134
Target Start/End: Complemental strand, 9505863 - 9505800
Alignment:
Q  71 tatattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    |||||||||||||| ||| ||| ||| ||||||||| || ||||||||||| ||||||||||||    
T  9505863 tatattcatgtaaaagtgtgttgaacaataaatttgagtttaaaaatcaatcatagaatcaaaa 9505800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 34027409 - 34027472
Alignment:
Q  71 tatattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    |||||||||||||  ||||||| ||  ||||||||| ||||||||||||||| |||||||||||    
T  34027409 tatattcatgtaagagtgagttgaataataaatttgagtgtaaaaatcaattctagaatcaaaa 34027472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 19601460 - 19601513
Alignment:
Q  94 aactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatccta 147  Q
    |||||||||||| | ||||||||||| ||||||||||||||  |||||||||||    
T  19601460 aactataaatttatttgtaaaaatcagttatagaatcaaaagctacaaatccta 19601513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 957618 - 957678
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    |||||||||||  ||||||||| | ||| |||||||||||||||| ||||| |||||||||    
T  957618 attcatgtaaaaatgagttaaattttaagtttgtgtgtaaaaatcgattatggaatcaaaa 957678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 1485145 - 1485201
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    ||||||| ||||||| ||| ||||||||| |||| |||||||||| |||||||||||    
T  1485145 atgtaaaagtgagttgaacaataaatttgagtgttaaaatcaattctagaatcaaaa 1485201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 6653900 - 6653844
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    ||||||| |||||||||||||||||||||  ||| ||| |||||| |||||||||||    
T  6653900 atgtaaaagtgagttaaactataaatttgcatgtgaaactcaattctagaatcaaaa 6653844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 6895945 - 6896033
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||||||| |||| || | ||||||||  |||||  ||||| |||| |||||||||||  |||||||||||||||||  |||||||    
T  6895945 attcatgtaaaagtgaatttatctataaatacgtgtgcgaaaataaattctagaatcaaaagctacaaatcctaacttcaggtagaatc 6896033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 6654105 - 6654172
Alignment:
Q  94 aactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaat 161  Q
    |||||||||||| ||||| |||||||| | |||||| ||||  ||||||||||| |||||| ||||||    
T  6654105 aactataaatttctgtgtgaaaatcaaatctagaattaaaagctacaaatcctagcttcaagtagaat 6654172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 145
Target Start/End: Original strand, 25195365 - 25195432
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcc 145  Q
    ||||||| ||||||| || | ||||||||||| | ||||||||||||||||| ||||  |||||||||    
T  25195365 atgtaaaagtgagttgaattgtaaatttgtgtatgaaaatcaattatagaatgaaaaactacaaatcc 25195432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 31305839 - 31305902
Alignment:
Q  71 tatattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    |||||| ||||||| ||||||| | | ||||||||| ||||| ||||||||| |||||||||||    
T  31305839 tatattaatgtaaaagtgagttgatcaataaatttgagtgtataaatcaattctagaatcaaaa 31305902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 7952725 - 7952791
Alignment:
Q  95 actataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaat 161  Q
    ||||||||||||||||| |||  ||||| |||||||||||  ||||||||||  |||||| ||||||    
T  7952725 actataaatttgtgtgtgaaacccaattctagaatcaaaagctacaaatcctcgcttcaagtagaat 7952791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 882776 - 882719
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatca 131  Q
    ||||||| ||| ||||||||||| |||||||||  |||||||||||||| | ||||||    
T  882776 attcatgcaaaagtgagttaaacaataaatttgaatgtaaaaatcaatttttgaatca 882719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 16540193 - 16540109
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||| ||||||| |||||||||| |||  || ||| ||||||  | ||||||||  ||||||||||| |||||| |||||||    
T  16540193 atgtaaaagtgagtttaactataaatatgtaagtgaaactcaattcaataatcaaaagctacaaatcctagcttcaagtagaatc 16540109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 33502322 - 33502258
Alignment:
Q  79 tgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaat 143  Q
    |||||| ||||||| |||||||||| |||||||||||||||||| |||||||||||  |||||||    
T  33502322 tgtaaaagtgagttgaactataaatatgtgtgtaaaaatcaattttagaatcaaaagttacaaat 33502258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 11504057 - 11504133
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaactt 151  Q
    ||||||||||| ||||||| |||||||| ||||||||| |||| ||||| || ||||||||  |||||||||||||||    
T  11504057 attcatgtaaaagtgagttgaactataactttgtgtgtgaaaa-caattctataatcaaaaactacaaatcctaactt 11504133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 2002718 - 2002778
Alignment:
Q  102 atttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||||||||||||||||| |||||| ||||  ||||||||||| |||||| |||||||    
T  2002718 atttgtgtgtaaaaatcaattttagaatgaaaaactacaaatcctagcttcaagtagaatc 2002778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 32596084 - 32596012
Alignment:
Q  71 tatattcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaat 143  Q
    |||||| ||||||| ||||||| || ||| ||||||| |||||||||||||| |||||||||||  |||||||    
T  32596084 tatatttatgtaaaagtgagttgaattatgaatttgtatgtaaaaatcaattttagaatcaaaagttacaaat 32596012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 33019151 - 33019231
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaa 154  Q
    ||||||||||| ||||||| |||||||||||| ||||| |||||||||| || || |||||  ||||||| ||| ||||||    
T  33019151 attcatgtaaaagtgagttgaactataaatttatgtgtgaaaatcaattctaaaaccaaaagctacaaattctagcttcaa 33019231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 42741063 - 42740979
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||| |||||||  ||  |||||||| ||||||||||||||| |||||||||||  |||||||| || |||||| |||||||    
T  42741063 atgtaaaagtgagttggacagtaaatttgagtgtaaaaatcaattctagaatcaaaagctacaaatcttagcttcaagtagaatc 42740979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 162
Target Start/End: Complemental strand, 42982634 - 42982546
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||||||| |||||||  |  ||||||||||||||||||||||||| | |||||||||  ||||| | ||| |||||| |||||||    
T  42982634 attcatgtaaaagtgagttgtaaaataaatttgtgtgtaaaaatcaattctggaatcaaaagctacaatttctagcttcaagtagaatc 42982546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 133
Target Start/End: Original strand, 11759858 - 11759913
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaa 133  Q
    |||||| ||||| || |||||||||||||| |||||||||||||| ||||||||||    
T  11759858 atgtaagcgtgatttgaactataaatttgtatgtaaaaatcaattctagaatcaaa 11759913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 8800694 - 8800763
Alignment:
Q  75 ttcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatc 144  Q
    |||||||||| ||||||| || ||||||||||| | | ||||||||||||||| ||||||  ||||||||    
T  8800694 ttcatgtaaaagtgagttgaattataaatttgtatattaaaatcaattatagattcaaaagttacaaatc 8800763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 3352142 - 3352106
Alignment:
Q  98 ataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    |||||||||||||| ||||||||||||||||||||||    
T  3352142 ataaatttgtgtgtgaaaatcaattatagaatcaaaa 3352106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 162
Target Start/End: Complemental strand, 16518868 - 16518781
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    ||||||||||| ||||||| ||||||||||||||| |||||| || ||  || ||||||||  ||||||||||| |||| | |||||||    
T  16518868 attcatgtaaaagtgagttgaactataaatttgtgcgtaaaagtc-atcttataatcaaaagctacaaatcctatcttctagtagaatc 16518781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 162
Target Start/End: Complemental strand, 31453461 - 31453385
Alignment:
Q  86 gtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttcaattagaatc 162  Q
    |||||||||||| |||||||||| || ||||||||||  |||||||||| | ||||||  || |||||| |||||||    
T  31453461 gtgagttaaactctaaatttgtgcgtgaaaatcaatttcagaatcaaaaggaacaaattttagcttcaagtagaatc 31453385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 44439340 - 44439284
Alignment:
Q  78 atgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    ||||||| ||||||| ||| ||||||||| |||| |||||||||| |||||||||||    
T  44439340 atgtaaaagtgagttgaacaataaatttgagtgttaaaatcaattttagaatcaaaa 44439284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 33961978 - 33962036
Alignment:
Q  76 tcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaa 134  Q
    |||||||||  ||| || ||| ||||||||| || ||||||||||||||||||||||||    
T  33961978 tcatgtaaaaatgacttgaacaataaatttgagtctaaaaatcaattatagaatcaaaa 33962036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 13912875 - 13912798
Alignment:
Q  76 tcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatcaaaatgtacaaatcctaacttca 153  Q
    |||||||||  |||||| |||  ||||||||||||||||||| |||| |||||| ||||  ||||||| ||| |||||    
T  13912875 tcatgtaaaaatgagttgaacggtaaatttgtgtgtaaaaattaattctagaataaaaaattacaaattctagcttca 13912798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 37541387 - 37541331
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatc 130  Q
    ||||||||||| || |||||||| ||||||||| |  |||||||||||| |||||||    
T  37541387 attcatgtaaaagtaagttaaacaataaatttgaggctaaaaatcaattgtagaatc 37541331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 14109 - 14166
Alignment:
Q  74 attcatgtaaacgtgagttaaactataaatttgtgtgtaaaaatcaattatagaatca 131  Q
    |||||||| || ||||||| ||  ||||||||| ||||||||||||||| ||||||||    
T  14109 attcatgtgaaagtgagttgaaaaataaatttgagtgtaaaaatcaattctagaatca 14166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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