View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0913_low_34 (Length: 357)

Name: NF0913_low_34
Description: NF0913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0913_low_34
NF0913_low_34
[»] chr1 (51 HSPs)
chr1 (1-332)||(32711119-32711455)
chr1 (235-332)||(15368820-15368925)
chr1 (227-332)||(21884582-21884695)
chr1 (235-285)||(17056909-17056960)
chr1 (235-287)||(23464013-23464066)
chr1 (235-287)||(49251422-49251475)
chr1 (235-329)||(37490905-37491007)
chr1 (226-286)||(2208666-2208727)
chr1 (227-287)||(24661989-24662050)
chr1 (235-287)||(37733770-37733823)
chr1 (235-278)||(4354141-4354185)
chr1 (234-329)||(12866137-12866241)
chr1 (235-332)||(15774287-15774392)
chr1 (241-287)||(17350082-17350129)
chr1 (235-332)||(43555849-43555954)
chr1 (235-332)||(46116149-46116254)
chr1 (239-281)||(17871114-17871155)
chr1 (235-280)||(20357475-20357521)
chr1 (235-280)||(20562434-20562480)
chr1 (235-280)||(23930578-23930624)
chr1 (243-281)||(35111673-35111711)
chr1 (235-287)||(38019974-38020028)
chr1 (241-286)||(52833134-52833180)
chr1 (241-281)||(11907335-11907376)
chr1 (235-287)||(19793541-19793594)
chr1 (235-287)||(27745172-27745225)
chr1 (235-279)||(29331199-29331244)
chr1 (240-287)||(38021272-38021320)
chr1 (235-281)||(538362-538409)
chr1 (241-287)||(2052709-2052756)
chr1 (235-278)||(23345092-23345135)
chr1 (241-287)||(29491491-29491538)
chr1 (241-287)||(39238737-39238784)
chr1 (241-287)||(40678844-40678891)
chr1 (235-265)||(4429532-4429562)
chr1 (241-329)||(9527447-9527543)
chr1 (235-265)||(18923935-18923965)
chr1 (246-287)||(24168606-24168648)
chr1 (233-286)||(49916453-49916507)
chr1 (235-287)||(8261702-8261755)
chr1 (235-287)||(11802047-11802100)
chr1 (227-287)||(21635564-21635625)
chr1 (227-280)||(22346427-22346480)
chr1 (241-281)||(25819206-25819247)
chr1 (239-287)||(30649112-30649161)
chr1 (235-287)||(38851650-38851703)
chr1 (235-287)||(42831962-42832015)
chr1 (236-265)||(43237789-43237818)
chr1 (246-281)||(1660969-1661005)
chr1 (18-54)||(6554537-6554573)
chr1 (235-278)||(24014644-24014688)
[»] chr5 (47 HSPs)
chr5 (235-332)||(9577317-9577413)
chr5 (224-329)||(32158392-32158505)
chr5 (235-287)||(33800908-33800961)
chr5 (233-332)||(20945866-20945973)
chr5 (235-329)||(29096286-29096388)
chr5 (227-329)||(29106016-29106126)
chr5 (235-332)||(26168989-26169092)
chr5 (235-329)||(29050815-29050906)
chr5 (235-287)||(2411321-2411374)
chr5 (235-287)||(33729793-33729846)
chr5 (235-287)||(42455421-42455474)
chr5 (235-329)||(19058982-19059084)
chr5 (235-287)||(22599963-22600015)
chr5 (235-279)||(26302529-26302573)
chr5 (235-281)||(973009-973056)
chr5 (241-287)||(1463892-1463939)
chr5 (235-281)||(18872536-18872583)
chr5 (235-281)||(27219596-27219643)
chr5 (227-281)||(42595748-42595803)
chr5 (235-280)||(18478018-18478064)
chr5 (238-279)||(40339134-40339176)
chr5 (235-287)||(1244754-1244807)
chr5 (235-287)||(29144157-29144210)
chr5 (235-287)||(29841363-29841416)
chr5 (236-279)||(6614073-6614117)
chr5 (237-284)||(7234902-7234950)
chr5 (244-287)||(10943740-10943784)
chr5 (235-287)||(38426788-38426840)
chr5 (241-287)||(4674842-4674889)
chr5 (241-279)||(6447515-6447554)
chr5 (237-287)||(8015852-8015903)
chr5 (252-287)||(9125698-9125733)
chr5 (235-281)||(27440331-27440378)
chr5 (235-273)||(36888134-36888173)
chr5 (227-265)||(29266075-29266113)
chr5 (231-280)||(33141823-33141873)
chr5 (235-287)||(843395-843448)
chr5 (245-278)||(2867652-2867685)
chr5 (243-287)||(36045161-36045206)
chr5 (246-287)||(42553168-42553209)
chr5 (235-287)||(42801468-42801521)
chr5 (252-287)||(2328627-2328663)
chr5 (235-263)||(7645154-7645182)
chr5 (235-286)||(21017634-21017686)
chr5 (235-263)||(23648344-23648372)
chr5 (235-263)||(23810200-23810228)
chr5 (235-263)||(31934927-31934955)
[»] chr4 (63 HSPs)
chr4 (227-329)||(9285637-9285747)
chr4 (227-329)||(52560771-52560881)
chr4 (236-332)||(10098141-10098245)
chr4 (227-287)||(56546476-56546537)
chr4 (235-287)||(3442858-3442911)
chr4 (235-326)||(3465598-3465697)
chr4 (235-287)||(47017973-47018026)
chr4 (235-284)||(35031398-35031448)
chr4 (235-287)||(548914-548967)
chr4 (235-287)||(6053995-6054048)
chr4 (235-287)||(13211379-13211432)
chr4 (239-287)||(53698007-53698056)
chr4 (235-329)||(20753103-20753205)
chr4 (235-281)||(3544465-3544512)
chr4 (241-287)||(14149814-14149861)
chr4 (241-287)||(28520758-28520805)
chr4 (241-287)||(48968237-48968284)
chr4 (227-265)||(35803143-35803181)
chr4 (235-287)||(5430392-5430445)
chr4 (235-279)||(9172406-9172451)
chr4 (235-287)||(9924871-9924924)
chr4 (224-265)||(20266866-20266907)
chr4 (235-287)||(24234101-24234154)
chr4 (246-286)||(27921922-27921963)
chr4 (235-279)||(33944398-33944443)
chr4 (240-287)||(8690234-8690282)
chr4 (235-278)||(35333024-35333068)
chr4 (243-287)||(46799431-46799475)
chr4 (233-265)||(56314774-56314806)
chr4 (245-287)||(9692987-9693030)
chr4 (235-281)||(35909196-35909243)
chr4 (241-287)||(36954158-36954205)
chr4 (224-286)||(49089305-49089368)
chr4 (241-287)||(53815717-53815764)
chr4 (227-265)||(534815-534853)
chr4 (235-272)||(4722506-4722544)
chr4 (235-265)||(6365339-6365369)
chr4 (235-277)||(12868064-12868106)
chr4 (235-281)||(23376199-23376245)
chr4 (241-287)||(26708579-26708625)
chr4 (235-265)||(32885703-32885733)
chr4 (235-265)||(48309160-48309190)
chr4 (235-265)||(50657895-50657925)
chr4 (235-265)||(51077882-51077912)
chr4 (239-287)||(5635208-5635257)
chr4 (224-280)||(13073188-13073245)
chr4 (299-332)||(20610828-20610861)
chr4 (239-287)||(34773710-34773759)
chr4 (241-281)||(36008296-36008337)
chr4 (239-287)||(38433330-38433379)
chr4 (236-265)||(44074869-44074898)
chr4 (235-287)||(45350291-45350344)
chr4 (235-287)||(45359770-45359823)
chr4 (235-279)||(46482852-46482897)
chr4 (243-287)||(52031230-52031275)
chr4 (235-287)||(52608594-52608647)
chr4 (235-267)||(30369361-30369393)
chr4 (243-287)||(34106625-34106669)
chr4 (233-265)||(35451171-35451203)
chr4 (240-287)||(37032206-37032254)
chr4 (235-278)||(40200792-40200836)
chr4 (233-265)||(49280719-49280751)
chr4 (240-287)||(56531263-56531311)
[»] chr8 (47 HSPs)
chr8 (235-332)||(4798516-4798621)
chr8 (235-287)||(9524972-9525025)
chr8 (235-287)||(24608510-24608563)
chr8 (235-287)||(15042392-15042445)
chr8 (235-281)||(43847717-43847764)
chr8 (238-287)||(10199769-10199819)
chr8 (235-329)||(23857301-23857404)
chr8 (233-329)||(25119221-25119325)
chr8 (224-323)||(6064381-6064488)
chr8 (235-287)||(17980297-17980350)
chr8 (233-281)||(30942632-30942681)
chr8 (235-279)||(7649544-7649588)
chr8 (241-287)||(2696554-2696601)
chr8 (241-287)||(2800040-2800087)
chr8 (239-281)||(8034549-8034592)
chr8 (243-286)||(14683900-14683943)
chr8 (235-277)||(39484407-39484450)
chr8 (241-286)||(4293904-4293950)
chr8 (235-287)||(17987476-17987529)
chr8 (243-287)||(21133546-21133591)
chr8 (241-287)||(38790599-38790647)
chr8 (233-265)||(2376531-2376563)
chr8 (241-279)||(1588788-1588827)
chr8 (243-332)||(13537286-13537383)
chr8 (243-332)||(13626834-13626931)
chr8 (235-277)||(26703927-26703970)
chr8 (235-280)||(5184921-5184967)
chr8 (235-265)||(7540538-7540568)
chr8 (235-265)||(13762562-13762592)
chr8 (246-287)||(26657882-26657924)
chr8 (235-265)||(28465633-28465663)
chr8 (235-265)||(41089200-41089230)
chr8 (241-277)||(18009752-18009789)
chr8 (235-287)||(25689415-25689468)
chr8 (225-277)||(34631999-34632052)
chr8 (292-329)||(39258660-39258697)
chr8 (235-287)||(44136304-44136357)
chr8 (252-287)||(1503944-1503980)
chr8 (18-54)||(2386046-2386082)
chr8 (242-281)||(5323944-5323984)
chr8 (252-287)||(7765678-7765714)
chr8 (244-287)||(13702379-13702423)
chr8 (252-287)||(26022282-26022318)
chr8 (235-263)||(40249932-40249960)
chr8 (227-282)||(41793005-41793060)
chr8 (235-278)||(42761901-42761945)
chr8 (297-329)||(42762010-42762042)
[»] chr7 (48 HSPs)
chr7 (227-332)||(22965933-22966046)
chr7 (235-332)||(30644184-30644289)
chr7 (227-287)||(2261511-2261572)
chr7 (227-287)||(5787468-5787529)
chr7 (239-287)||(23685581-23685630)
chr7 (235-287)||(47552228-47552281)
chr7 (238-332)||(44437809-44437902)
chr7 (235-332)||(34948121-34948226)
chr7 (235-281)||(8725171-8725217)
chr7 (235-279)||(27047750-27047795)
chr7 (235-281)||(17900912-17900959)
chr7 (235-329)||(14967611-14967714)
chr7 (235-329)||(15397087-15397190)
chr7 (235-328)||(29710080-29710180)
chr7 (235-280)||(46337902-46337948)
chr7 (235-280)||(46716348-46716394)
chr7 (227-287)||(24479590-24479651)
chr7 (235-279)||(36316009-36316054)
chr7 (241-332)||(38451884-38451983)
chr7 (235-279)||(45011693-45011738)
chr7 (242-332)||(29658247-29658345)
chr7 (235-286)||(38778707-38778759)
chr7 (235-287)||(4818035-4818089)
chr7 (235-277)||(8195930-8195973)
chr7 (246-289)||(8903820-8903863)
chr7 (241-287)||(21285380-21285427)
chr7 (235-265)||(4590656-4590686)
chr7 (246-287)||(7465492-7465534)
chr7 (235-265)||(21086119-21086149)
chr7 (235-265)||(22047535-22047565)
chr7 (299-329)||(24440915-24440945)
chr7 (235-265)||(27907946-27907976)
chr7 (227-265)||(29778988-29779026)
chr7 (224-281)||(30152745-30152803)
chr7 (239-287)||(2366376-2366425)
chr7 (237-277)||(27957634-27957675)
chr7 (243-287)||(34960947-34960992)
chr7 (246-286)||(47355835-47355876)
chr7 (224-287)||(11808042-11808106)
chr7 (252-287)||(12640588-12640624)
chr7 (227-259)||(21925482-21925514)
chr7 (235-263)||(22741218-22741246)
chr7 (252-287)||(30388506-30388542)
chr7 (241-288)||(30566524-30566572)
chr7 (227-279)||(30748001-30748053)
chr7 (235-263)||(34962024-34962052)
chr7 (246-281)||(35195869-35195905)
chr7 (252-287)||(48719834-48719870)
[»] chr3 (45 HSPs)
chr3 (235-332)||(43566771-43566876)
chr3 (235-287)||(23820644-23820697)
chr3 (235-330)||(33206772-33206875)
chr3 (238-332)||(24751244-24751337)
chr3 (235-279)||(53467964-53468008)
chr3 (227-332)||(14417875-14417988)
chr3 (235-281)||(20244149-20244196)
chr3 (238-326)||(35483287-35483383)
chr3 (235-332)||(36727438-36727542)
chr3 (239-287)||(39492840-39492889)
chr3 (235-287)||(49146099-49146152)
chr3 (235-286)||(38176069-38176121)
chr3 (241-287)||(9625004-9625051)
chr3 (235-332)||(13539939-13540044)
chr3 (241-287)||(27183708-27183755)
chr3 (235-285)||(40786295-40786346)
chr3 (235-281)||(49639043-49639090)
chr3 (237-329)||(31698550-31698650)
chr3 (235-276)||(34503230-34503272)
chr3 (241-281)||(14868706-14868747)
chr3 (235-287)||(35849306-35849359)
chr3 (235-287)||(41121886-41121939)
chr3 (235-287)||(42271040-42271093)
chr3 (241-284)||(7448393-7448437)
chr3 (241-284)||(7456535-7456579)
chr3 (235-287)||(47062094-47062146)
chr3 (241-287)||(3955327-3955376)
chr3 (235-281)||(19540356-19540403)
chr3 (239-278)||(33072309-33072348)
chr3 (241-287)||(36331753-36331800)
chr3 (241-287)||(43774206-43774253)
chr3 (241-287)||(52030142-52030189)
chr3 (252-287)||(54021334-54021369)
chr3 (235-265)||(17440015-17440045)
chr3 (235-265)||(32876166-32876196)
chr3 (238-286)||(15498224-15498273)
chr3 (235-287)||(16006533-16006586)
chr3 (226-263)||(21420241-21420278)
chr3 (235-264)||(29507232-29507261)
chr3 (241-281)||(36476380-36476421)
chr3 (235-287)||(45713495-45713548)
chr3 (227-260)||(53472631-53472664)
chr3 (235-286)||(8475430-8475482)
chr3 (252-287)||(47098767-47098803)
chr3 (235-263)||(47427740-47427768)
[»] chr2 (55 HSPs)
chr2 (235-332)||(580758-580863)
chr2 (235-332)||(17154664-17154769)
chr2 (235-328)||(20122454-20122555)
chr2 (235-287)||(10262754-10262807)
chr2 (235-287)||(30474222-30474275)
chr2 (241-286)||(32527105-32527151)
chr2 (235-287)||(22297479-22297532)
chr2 (235-283)||(26807115-26807164)
chr2 (235-286)||(16028136-16028188)
chr2 (235-329)||(34620533-34620635)
chr2 (235-329)||(24034039-24034133)
chr2 (241-287)||(29034997-29035044)
chr2 (235-327)||(8234772-8234872)
chr2 (235-288)||(25050266-25050320)
chr2 (241-287)||(34034372-34034418)
chr2 (238-279)||(36665448-36665490)
chr2 (227-287)||(18386839-18386900)
chr2 (235-287)||(36481084-36481137)
chr2 (235-287)||(36520807-36520860)
chr2 (235-287)||(44422122-44422175)
chr2 (235-329)||(3179339-3179441)
chr2 (235-329)||(7086268-7086370)
chr2 (233-265)||(19052661-19052693)
chr2 (235-329)||(32891296-32891398)
chr2 (240-287)||(43870973-43871021)
chr2 (235-328)||(2114414-2114515)
chr2 (241-287)||(3037649-3037696)
chr2 (241-287)||(9796918-9796965)
chr2 (241-287)||(9802913-9802960)
chr2 (235-332)||(19905630-19905735)
chr2 (235-277)||(32943354-32943397)
chr2 (235-328)||(33001532-33001633)
chr2 (245-287)||(44187729-44187772)
chr2 (227-265)||(2558308-2558346)
chr2 (235-319)||(3364740-3364832)
chr2 (226-287)||(17119448-17119507)
chr2 (235-265)||(22538554-22538584)
chr2 (235-265)||(27495553-27495583)
chr2 (241-329)||(29664624-29664720)
chr2 (235-265)||(31564110-31564140)
chr2 (235-280)||(42091308-42091354)
chr2 (235-287)||(1836603-1836656)
chr2 (235-287)||(4157676-4157729)
chr2 (244-288)||(17974838-17974883)
chr2 (241-281)||(21970472-21970513)
chr2 (246-287)||(34830613-34830654)
chr2 (224-265)||(38530245-38530286)
chr2 (235-279)||(44721739-44721784)
chr2 (235-287)||(45523680-45523733)
chr2 (252-287)||(8250300-8250336)
chr2 (235-278)||(31956881-31956925)
chr2 (252-287)||(34355756-34355792)
chr2 (235-279)||(35049185-35049229)
chr2 (252-287)||(36005477-36005513)
chr2 (240-283)||(40044110-40044154)
[»] scaffold0334 (1 HSPs)
scaffold0334 (227-287)||(5311-5371)
[»] chr6 (33 HSPs)
chr6 (241-287)||(9064887-9064934)
chr6 (235-281)||(10377157-10377204)
chr6 (235-332)||(12089112-12089217)
chr6 (236-332)||(25020503-25020607)
chr6 (235-287)||(9491762-9491815)
chr6 (235-287)||(19642574-19642627)
chr6 (235-329)||(12127887-12127989)
chr6 (235-332)||(18904658-18904763)
chr6 (235-280)||(18244046-18244092)
chr6 (227-265)||(23771040-23771078)
chr6 (235-287)||(9438317-9438370)
chr6 (235-287)||(10373610-10373663)
chr6 (235-287)||(12101901-12101954)
chr6 (239-287)||(22983599-22983648)
chr6 (239-287)||(23804760-23804809)
chr6 (235-279)||(34365750-34365795)
chr6 (235-287)||(6652225-6652277)
chr6 (241-280)||(14981736-14981776)
chr6 (235-329)||(19165366-19165467)
chr6 (235-329)||(22389728-22389830)
chr6 (227-287)||(26598621-26598681)
chr6 (235-279)||(22501033-22501079)
chr6 (235-281)||(24623537-24623584)
chr6 (235-332)||(34396098-34396203)
chr6 (235-265)||(5288395-5288425)
chr6 (236-281)||(9424460-9424506)
chr6 (239-284)||(32057053-32057099)
chr6 (235-287)||(15288982-15289035)
chr6 (233-280)||(753346-753394)
chr6 (235-286)||(6025414-6025466)
chr6 (235-287)||(15126258-15126310)
chr6 (235-263)||(30566073-30566101)
chr6 (241-280)||(31949859-31949899)
[»] scaffold1990 (1 HSPs)
scaffold1990 (235-287)||(909-962)
[»] scaffold0092 (1 HSPs)
scaffold0092 (235-287)||(47344-47397)
[»] scaffold0008 (1 HSPs)
scaffold0008 (235-279)||(43732-43776)
[»] scaffold0308 (1 HSPs)
scaffold0308 (241-287)||(7097-7144)
[»] scaffold0039 (1 HSPs)
scaffold0039 (236-282)||(101847-101894)
[»] scaffold0809 (1 HSPs)
scaffold0809 (241-287)||(4833-4879)
[»] scaffold0191 (1 HSPs)
scaffold0191 (235-281)||(16862-16908)
[»] scaffold0112 (1 HSPs)
scaffold0112 (227-287)||(17958-18020)
[»] scaffold0062 (1 HSPs)
scaffold0062 (236-281)||(7051-7097)
[»] scaffold0006 (1 HSPs)
scaffold0006 (235-279)||(159029-159074)
[»] scaffold0019 (1 HSPs)
scaffold0019 (236-287)||(37041-37093)
[»] scaffold0036 (1 HSPs)
scaffold0036 (241-287)||(25047-25094)
[»] scaffold0178 (2 HSPs)
scaffold0178 (239-287)||(4342-4391)
scaffold0178 (239-286)||(16084-16132)
[»] scaffold1086 (1 HSPs)
scaffold1086 (235-263)||(2503-2531)
[»] scaffold0063 (1 HSPs)
scaffold0063 (252-287)||(56358-56394)
[»] scaffold0044 (1 HSPs)
scaffold0044 (298-330)||(49906-49938)
[»] scaffold0021 (1 HSPs)
scaffold0021 (235-287)||(111725-111777)


Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 32711455 - 32711119
Alignment:
Q  1 taaagagaaatcattagaaatgaaagaaagaaaacaacaattttaccaaattaattttattcatcaatgtctgatttttattattataaacgtaaagtga 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32711455 taaagagaaa-cattagaaatgaaagaaagaaaacaacaattttaccaaattaattttattcatcaatgtctgatttttattattataaacgtaaagtga 32711357  T
Q  101 aaattattaatttataagtgatgcacgtaatattagttagagcatgtccttcaaaaattagttagagtataattgaaggaagaaacaattaaaattac-c 199  Q
    |||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  32711356 aaattattaatttataagcgatgcacataata--agttagagcatgtccttcaaaaattagttagagtataattgaaggaagaaacaattaaaattacat 32711259  T
Q  200 ttttttaaaaattaaaaagtaaccgcttagctaaattggtaggacaatgcattattatatgcagggccggggttcgaaccccagacac-------attga 292  Q
    ||||||||| |||||||||||||  ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||       ||| |    
T  32711258 ttttttaaatattaaaaagtaactacttggctaaattggtagaacaatgcattattatatgcagggccggggttcgaaccccagacaccccacttattca 32711159  T
Q  293 tcttttaaggtaaattctagccactagactacctgaccaa 332  Q
     ||| |||||| ||||||||||||||||||| ||||||||    
T  32711158 ccttataaggtgaattctagccactagactatctgaccaa 32711119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 15368820 - 15368925
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||       ||| || || |||||| ||||||||||||||| ||||||    
T  15368820 ttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcattttataaggtgaattctagccactaggctacct 15368919  T
Q  327 gaccaa 332  Q
    ||||||    
T  15368920 gaccaa 15368925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 227 - 332
Target Start/End: Original strand, 21884582 - 21884695
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccacta 318  Q
    ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||       ||| | ||| |||||| ||||||| ||||||    
T  21884582 tagctcaattggtaggacaatgcattattatatgcaggggccgaggttcgaaccccagacaccccacttattcaccttataaggtgaattctaaccacta 21884681  T
Q  319 gactacctgaccaa 332  Q
    |||||| |||||||    
T  21884682 gactacatgaccaa 21884695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 17056960 - 17056909
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagac 285  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17056960 ttggtaggacaatgcattattatatgcaggggccggggttcgaaccccagac 17056909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 23464066 - 23464013
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  23464066 ttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacac 23464013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 49251475 - 49251422
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  49251475 ttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccagacac 49251422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 37490905 - 37491007
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||||||||||||||||||||||| |||||||||| |||||| | |||||       ||| ||||| |||||| ||||||||||||||| ||||||    
T  37490905 ttggtaggacaatgcattattatatgcaggggccggggtacgaaccacggacaccccgcttattcatcttataaggtgaattctagccactaggctacct 37491004  T
Q  327 gac 329  Q
    |||    
T  37491005 gac 37491007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 286
Target Start/End: Complemental strand, 2208727 - 2208666
Alignment:
Q  226 ttagctaaattggtaggacaatgcattattatatgca-gggccggggttcgaaccccagaca 286  Q
    |||||| |||||||||||||||||||||||||||||| ||| || ||||| |||||||||||    
T  2208727 ttagctcaattggtaggacaatgcattattatatgcaggggacgaggttcaaaccccagaca 2208666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 287
Target Start/End: Original strand, 24661989 - 24662050
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||| |||||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  24661989 tagctcaattggtaggacaatgcattattatatgcaggggtcaggattcgaaccccagacac 24662050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 37733770 - 37733823
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag-ggccggggttcgaaccccagacac 287  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||| |||||    
T  37733770 ttggtaggacaatgcattattatatgcagtggacggggttcgaaccccggacac 37733823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 278
Target Start/End: Complemental strand, 4354185 - 4354141
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaac 278  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  4354185 ttggtaggacaatgcattattatatgcaggggccggggttcgaac 4354141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 329
Target Start/End: Original strand, 12866137 - 12866241
Alignment:
Q  234 attggtaggacaatgcattattatatgc--agggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactac 324  Q
    |||||||||| |||||||||||||||||  |||||||||||||||| |||| ||||       ||| ||||| |||||| |||||||||||||| | |||    
T  12866137 attggtaggataatgcattattatatgcagagggccggggttcgaatcccacacaccctacttattcatcttataaggtgaattctagccactaaattac 12866236  T
Q  325 ctgac 329  Q
    |||||    
T  12866237 ctgac 12866241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 15774392 - 15774287
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||||||||||||||||||||| | ||| ||||||||||||||| |||||       ||| | ||| |||||| ||||||||||||||  ||||||    
T  15774392 ttggtaggacaatgcattattatatgtaggggtcggggttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaagctacct 15774293  T
Q  327 gaccaa 332  Q
    ||||||    
T  15774292 gaccaa 15774287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 17350082 - 17350129
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  17350082 ggacaatgcattattatatgcaggggccggggttcgaaccccggacac 17350129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 43555954 - 43555849
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg-ccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||||||||||||||||||||||||||  |||||||| |||||  |||||       ||| | ||| ||||||  |||||||||||||||||||||    
T  43555954 ttggtaggacaatgcattattatatgcagggatcggggttcaaacccaggacaccccacttatttaccttataaggtggattctagccactagactacct 43555855  T
Q  327 gaccaa 332  Q
    ||||||    
T  43555854 gaccaa 43555849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 46116254 - 46116149
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||||||||||||||| ||||||| |||| |||||||||||||| |||||       ||| | ||| |||||| ||||||| ||||||| ||||||    
T  46116254 ttggtaggacaatgcattatcatatgcaggggctggggttcgaaccccggacaccccaattattcaccttataaggtgaattctaaccactaggctacct 46116155  T
Q  327 gaccaa 332  Q
    ||||||    
T  46116154 gaccaa 46116149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 17871155 - 17871114
Alignment:
Q  239 taggacaatgcattattatatgcagggccggggttcgaacccc 281  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  17871155 taggacaatgcattattatatgcaggg-cggggttcgaacccc 17871114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 20357475 - 20357521
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccc 280  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  20357475 ttggtaggacaatgcattattatatgcaggggctggggttcgaaccc 20357521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 20562480 - 20562434
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccc 280  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||    
T  20562480 ttggtaggacaatgcattattatatgcaggggctggggttcgaaccc 20562434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 23930624 - 23930578
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccc 280  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||    
T  23930624 ttggtaggacaatgcattattatatgcaggggtcggggttcgaaccc 23930578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 281
Target Start/End: Original strand, 35111673 - 35111711
Alignment:
Q  243 acaatgcattattatatgcagggccggggttcgaacccc 281  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  35111673 acaatgcattattatatgcaggggcggggttcgaacccc 35111711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 38020028 - 38019974
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcg-aaccccagacac 287  Q
    |||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  38020028 ttggtaggacaatgcattattatatgcaggggccggagttcgaaaccccagacac 38019974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 286
Target Start/End: Complemental strand, 52833180 - 52833134
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagaca 286  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  52833180 ggacaatgcattattatatgcaggggccggggttcgaaccccggaca 52833134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 281
Target Start/End: Complemental strand, 11907376 - 11907335
Alignment:
Q  241 ggacaatgcattattatatgcag-ggccggggttcgaacccc 281  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  11907376 ggacaatgcattattatatgcagaggccggggttcgaacccc 11907335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 19793541 - 19793594
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| |||||||  |||||||||| |||||    
T  19793541 ttggtaggacaatgcattattatatgcaggggccggaattcgaaccccggacac 19793594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 27745172 - 27745225
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg-ccggggttcgaaccccagacac 287  Q
    ||||||||| |||||||||||||||||||||  ||||||||||||||| |||||    
T  27745172 ttggtaggaaaatgcattattatatgcagggatcggggttcgaaccccggacac 27745225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 29331244 - 29331199
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg-ccggggttcgaacc 279  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  29331244 ttggtaggacaatgcattattatatgcagggtccgggattcgaacc 29331199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 287
Target Start/End: Original strand, 38021272 - 38021320
Alignment:
Q  240 aggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  38021272 aggacaatgcattattatatgcaggggccggagttcgaaccccggacac 38021320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 538409 - 538362
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaacccc 281  Q
    ||||||| |||||||||||||||||||| ||||||| |||||||||||    
T  538409 ttggtagaacaatgcattattatatgcaggggccggagttcgaacccc 538362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 2052756 - 2052709
Alignment:
Q  241 ggacaatgcattattatatgcaggg-ccggggttcgaaccccagacac 287  Q
    |||||||||||||| |||||||||| |||||||||||||||| |||||    
T  2052756 ggacaatgcattatcatatgcaggggccggggttcgaaccccggacac 2052709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 278
Target Start/End: Complemental strand, 23345135 - 23345092
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagggccggggttcgaac 278  Q
    |||||||||||||||||| |||||||||||| | ||||||||||    
T  23345135 ttggtaggacaatgcattgttatatgcaggggccgggttcgaac 23345092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 29491491 - 29491538
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||    
T  29491491 ggacaatgcattattatatgcaggggtcggggttcgaaccccggacac 29491538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 39238737 - 39238784
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| |||||| |||||||||||| |||||    
T  39238737 ggacaatgcattattatatgcaggggccgaggttcgaaccccggacac 39238784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 40678844 - 40678891
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| |||||||||||||| |||| |||||    
T  40678844 ggacaatgcattattatatgcaggggccggggttcgatccccggacac 40678891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Complemental strand, 4429562 - 4429532
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  4429562 ttggtaggacaatgcattattatatgcaggg 4429532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 9527447 - 9527543
Alignment:
Q  241 ggacaatgcattattatatgcagggc-cggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacctgac 329  Q
    |||||||||||| ||||||||||||  ||||||| ||||||  |||||       ||| ||||| |||||| |||||||||||||||||||||||||    
T  9527447 ggacaatgcattgttatatgcaggggtcggggtttgaaccctggacaccccacttattcatcttataaggtgaattctagccactagactacctgac 9527543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Complemental strand, 18923965 - 18923935
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  18923965 ttggtaggacaatgcattattatatgcaggg 18923935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 24168648 - 24168606
Alignment:
Q  246 atgcattattatatgcaggg-ccggggttcgaaccccagacac 287  Q
    ||||||||||||||| |||| ||||||||||||||||||||||    
T  24168648 atgcattattatatgtagggaccggggttcgaaccccagacac 24168606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 49916453 - 49916507
Alignment:
Q  233 aattggtaggacaatgcattattatatgca-gggccggggttcgaaccccagaca 286  Q
    |||||||||||||||||||||||||||| | ||| ||||||||||| ||| ||||    
T  49916453 aattggtaggacaatgcattattatatgtaggggtcggggttcgaatcccggaca 49916507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 8261755 - 8261702
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||||||| |||||||||||||||||| ||| |||||||| || |||||||||    
T  8261755 ttggtaggataatgcattattatatgcaggggtcggggttccaatcccagacac 8261702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 11802100 - 11802047
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||| | |||  |||||||||||||| |||||    
T  11802100 ttggtaggacaatgcattattatatgtaggggttggggttcgaaccccggacac 11802047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 287
Target Start/End: Original strand, 21635564 - 21635625
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgcag-ggccggggttcgaaccccagacac 287  Q
    ||||| |||||||| |||||||||||| |||||||||  | |||||||| ||||||||||||    
T  21635564 tagctcaattggtaagacaatgcattaatatatgcagatgtcggggttcaaaccccagacac 21635625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 22346427 - 22346480
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgcagggccggggttcgaaccc 280  Q
    ||||||| ||||||||||||| |||||||||| ||||||   ||||||||||||    
T  22346427 tagctaagttggtaggacaatacattattataagcaggggtcgggttcgaaccc 22346480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 281
Target Start/End: Original strand, 25819206 - 25819247
Alignment:
Q  241 ggacaatgcattattatatgcagg-gccggggttcgaacccc 281  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  25819206 ggacaatgcattattatatgtaggagccggggttcgaacccc 25819247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 30649112 - 30649161
Alignment:
Q  239 taggacaatgcattattatatgcagg-gccggggttcgaaccccagacac 287  Q
    |||||||| ||||||||||||||||| |  ||||||||||||||||||||    
T  30649112 taggacaacgcattattatatgcaggagttggggttcgaaccccagacac 30649161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 38851650 - 38851703
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagg-gccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||| ||| | |||||||| || |||||||||    
T  38851650 ttggtaggacaatgcattattatatgtaggtgtcggggttcaaatcccagacac 38851703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 42831962 - 42832015
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||||||||| |||||||||||||||| |||| ||||||| |||||| |||||    
T  42831962 ttggtaggacattgcattattatatgcaggggctggggttcaaaccccggacac 42832015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 265
Target Start/End: Original strand, 43237789 - 43237818
Alignment:
Q  236 tggtaggacaatgcattattatatgcaggg 265  Q
    ||||||||||||||||||||||||||||||    
T  43237789 tggtaggacaatgcattattatatgcaggg 43237818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 281
Target Start/End: Original strand, 1660969 - 1661005
Alignment:
Q  246 atgcattattatatgca-gggccggggttcgaacccc 281  Q
    ||||||||||||||||| |||||||||||||||||||    
T  1660969 atgcattattatatgcaggggccggggttcgaacccc 1661005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 6554573 - 6554537
Alignment:
Q  18 aaatgaaagaaagaaaacaacaattttaccaaattaa 54  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  6554573 aaatgaatgaaagagaacaacaattttaccaaattaa 6554537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 278
Target Start/End: Complemental strand, 24014688 - 24014644
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaac 278  Q
    |||||| ||||||||||||||||||||| ||||||| ||||||||    
T  24014688 ttggtaagacaatgcattattatatgcaggggccggagttcgaac 24014644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 9e-21; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 9577317 - 9577413
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacacattgatcttttaaggtaaattctagccactagactacctgaccaa 332  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||  |  ||| | ||| |||||| ||||||||||||||| ||||||||||||    
T  9577317 ttggtaggacaatgcattattatatgcatgggccggggttcgaacccca--cttattcaccttataaggtgaattctagccactaggctacctgaccaa 9577413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 329
Target Start/End: Complemental strand, 32158505 - 32158392
Alignment:
Q  224 gcttagctaaattggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagcca 315  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||  ||||       ||| | ||| |||||| |||||||||||    
T  32158505 gcttagctcaattggtaggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttattcaccttataaggtgaattctagcca 32158406  T
Q  316 ctagactacctgac 329  Q
    |||| |||||||||    
T  32158405 ctaggctacctgac 32158392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 33800908 - 33800961
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33800908 ttggtaggacaatgcattattatatgcaggggccggggttcgaaccccagacac 33800961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 233 - 332
Target Start/End: Complemental strand, 20945973 - 20945866
Alignment:
Q  233 aattggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactac 324  Q
    |||||||||||||||||||||||||||||| |||||||||||||||  || |||||       ||| | ||| |||||| |||||||||||||||| |||    
T  20945973 aattggtaggacaatgcattattatatgcaggggccggggttcgaaatccggacaccccacttattcaccttataaggtgaattctagccactagattac 20945874  T
Q  325 ctgaccaa 332  Q
    ||||||||    
T  20945873 ctgaccaa 20945866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 29096388 - 29096286
Alignment:
Q  235 ttggtaggacaatgcattattatatgc-agggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||| |||||       ||| | ||| |||||| ||||||||||||||| ||||||    
T  29096388 ttggtaggacaatgcattattatatgcaagggccggagttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacct 29096289  T
Q  327 gac 329  Q
    |||    
T  29096288 gac 29096286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 329
Target Start/End: Complemental strand, 29106126 - 29106016
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccacta 318  Q
    ||||| |||||||||||||||||||||||||||||| ||||||  |||||||||| ||||||       ||| | ||| |||||| |||||||||||| |    
T  29106126 tagctcaattggtaggacaatgcattattatatgcaggggccgaagttcgaaccctagacaccccacttattcaccttataaggttaattctagccacca 29106027  T
Q  319 gactacctgac 329  Q
    |||||||||||    
T  29106026 gactacctgac 29106016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 26169092 - 26168989
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-----attgatcttttaaggtaaattctagccactagactacctga 328  Q
    |||||||||||||||||||||||||||| |||  || ||||||||||| |||||     ||| | ||| ||||||||||||||||||||| ||||| |||    
T  26169092 ttggtaggacaatgcattattatatgcaggggttggagttcgaaccccggacacgacttattcaccttataaggtaaattctagccactaaactacttga 26168993  T
Q  329 ccaa 332  Q
    ||||    
T  26168992 ccaa 26168989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 29050815 - 29050906
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacacattgatcttttaaggtaaattctagccactagactacctgac 329  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| || |||||      | |||||||| ||||||||||||||| |||||||||    
T  29050815 ttggtaggacaatgcattattatatgcaggggccggggtttgaactccggacac----cccatttaaggtgaattctagccactaggctacctgac 29050906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 2411374 - 2411321
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||| ||||||||||||| ||||||| |||||||||||||||||    
T  2411374 ttggtaggacaatgtattattatatgcaggggccggagttcgaaccccagacac 2411321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 33729793 - 33729846
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | |||||||    
T  33729793 ttggtaggacaatgcattattatatgcaggggccggggttcgaatctcagacac 33729846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 42455474 - 42455421
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  42455474 ttggtaggacaatgcattattatatgcaggggccggagttcgaaccccggacac 42455421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 19059084 - 19058982
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||  |||||       ||| | ||| |||||| ||||||||||||||| ||||||    
T  19059084 ttggtaggacaatgcattatcatatgcaggggccggggttcgaaccctggacaccccacttattcaccttataaggtgaattctagccactagcctacct 19058985  T
Q  327 gac 329  Q
    |||    
T  19058984 gac 19058982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 22600015 - 22599963
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||||||  ||| || |||||||||||||    
T  22600015 ttggtaggacaatgcattattatatgcagggttgggatttgaaccccagacac 22599963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 26302573 - 26302529
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagggccggggttcgaacc 279  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||    
T  26302573 ttggtaggacaatgcattattatatacagggccggagttcgaacc 26302529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 973056 - 973009
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaacccc 281  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||    
T  973056 ttggtaggacaatgcattattatatacaggggccggggttcgaacccc 973009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 1463892 - 1463939
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  1463892 ggacaatgcattattatatgcaggggccggggttcgaaccccggacac 1463939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 18872536 - 18872583
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaacccc 281  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||    
T  18872536 ttggtaggacaatgcattattatatgcaggggtcggggttcgaacccc 18872583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 27219643 - 27219596
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaacccc 281  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||    
T  27219643 ttggtaggacaatgcattattatatgcatgggccggggttcaaacccc 27219596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 281
Target Start/End: Original strand, 42595748 - 42595803
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgcaggg-ccggggttcgaacccc 281  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  42595748 tagctcaattggtaggacaatacattattatatgcagggaccggggtttgaacccc 42595803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 18478018 - 18478064
Alignment:
Q  235 ttggtaggacaatgcattattatatgc-agggccggggttcgaaccc 280  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||    
T  18478018 ttggtaggacaatgcattattatatgctggggccggggttcgaaccc 18478064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 40339176 - 40339134
Alignment:
Q  238 gtaggacaatgcattattatatgca-gggccggggttcgaacc 279  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  40339176 gtaggacaatgcattattatatgcaggggccggggttcgaacc 40339134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 1244807 - 1244754
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||| ||||||||||||||| ||| | |||||||||||||||||||    
T  1244807 ttggtaggacaaagcattattatatgcaggggtcagggttcgaaccccagacac 1244754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 29144157 - 29144210
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| ||| ||||||| |||| ||||||||    
T  29144157 ttggtaggacaatgcattattatatgcaggggtcggggtttgaactccagacac 29144210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 29841363 - 29841416
Alignment:
Q  235 ttggtaggacaatgcattattatatgc-agggccggggttcgaaccccagacac 287  Q
    ||||||||||||||||||||||||||| ||||||| | |||||||||| |||||    
T  29841363 ttggtaggacaatgcattattatatgcaagggccgagattcgaaccccggacac 29841416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 6614117 - 6614073
Alignment:
Q  236 tggtaggacaatgcattattatatgca-gggccggggttcgaacc 279  Q
    |||||| |||||||||||||||||||| |||||||||||||||||    
T  6614117 tggtagaacaatgcattattatatgcaggggccggggttcgaacc 6614073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 284
Target Start/End: Complemental strand, 7234950 - 7234902
Alignment:
Q  237 ggtaggacaatgcattattatatgcag-ggccggggttcgaaccccaga 284  Q
    |||||||||||||||||||||||| || || ||||||||||||||||||    
T  7234950 ggtaggacaatgcattattatatgtagaggtcggggttcgaaccccaga 7234902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 287
Target Start/End: Original strand, 10943740 - 10943784
Alignment:
Q  244 caatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||    
T  10943740 caatgcattattatatgcaggggccggggttcgaaccccggacac 10943784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 38426840 - 38426788
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagggccggggttcgaaccccagacac 287  Q
    ||||||||| |||||||||||||||| ||||| | |||| |||||||||||||    
T  38426840 ttggtaggataatgcattattatatgtagggctgaggtttgaaccccagacac 38426788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 4674889 - 4674842
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||    
T  4674889 ggacaatgcattattatatgcaggggtcggggttcgaaccccggacac 4674842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 279
Target Start/End: Complemental strand, 6447554 - 6447515
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaacc 279  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  6447554 ggacaatgcattattatatgcaggggccggggttcgaacc 6447515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 287
Target Start/End: Original strand, 8015852 - 8015903
Alignment:
Q  237 ggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||||| |||||||||||| ||||| ||||||||||||||||||| |||||    
T  8015852 ggtaggataatgcattattacatgcaggggccggggttcgaaccccggacac 8015903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 287
Target Start/End: Original strand, 9125698 - 9125733
Alignment:
Q  252 tattatatgcagggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||||| |||||    
T  9125698 tattatatgcagggccggggttcgaaccccggacac 9125733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 27440378 - 27440331
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag-ggccggggttcgaacccc 281  Q
    ||||||||||||||||||||||||||||| || || ||||||||||||    
T  27440378 ttggtaggacaatgcattattatatgcagtggtcgaggttcgaacccc 27440331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 36888173 - 36888134
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggtt 273  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  36888173 ttggtaggacaatgcattattatatgcaggggccggggtt 36888134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 29266075 - 29266113
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgcaggg 265  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  29266075 tagctcaattgataggacaatgcattattatatgcaggg 29266113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 280
Target Start/End: Complemental strand, 33141873 - 33141823
Alignment:
Q  231 taaattggtaggacaatgcattattatatgcagg-gccggggttcgaaccc 280  Q
    ||||||| |||||||||||||||||||||||||| | || |||||||||||    
T  33141873 taaattgataggacaatgcattattatatgcaggagtcgaggttcgaaccc 33141823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 843448 - 843395
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||| ||||||||||||||||||| | ||| ||||||||||||||| |||||    
T  843448 ttggtatgacaatgcattattatatgtaggggacggggttcgaaccccggacac 843395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 2867685 - 2867652
Alignment:
Q  245 aatgcattattatatgcagggccggggttcgaac 278  Q
    ||||||||||||||||||||||||| ||||||||    
T  2867685 aatgcattattatatgcagggccggagttcgaac 2867652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 36045206 - 36045161
Alignment:
Q  243 acaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||| ||| ||||||||||||||| |||||    
T  36045206 acaatgcattattatatgcaggggtcggggttcgaaccccggacac 36045161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 42553209 - 42553168
Alignment:
Q  246 atgcattattatatgcagggccggggttcgaaccccagacac 287  Q
    ||||||| |||||||||||| ||||||||||||||| |||||    
T  42553209 atgcattgttatatgcagggtcggggttcgaaccccggacac 42553168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 42801521 - 42801468
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||| || |||||||||||||||||| ||| ||||||||||||||| |||||    
T  42801521 ttggtatgataatgcattattatatgcaggggtcggggttcgaaccccggacac 42801468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 287
Target Start/End: Original strand, 2328627 - 2328663
Alignment:
Q  252 tattatatgcagg-gccggggttcgaaccccagacac 287  Q
    ||||||||||||| |||||||||||||||||||||||    
T  2328627 tattatatgcaggagccggggttcgaaccccagacac 2328663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 263
Target Start/End: Complemental strand, 7645182 - 7645154
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag 263  Q
    |||||||||||||||||||||||||||||    
T  7645182 ttggtaggacaatgcattattatatgcag 7645154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 21017686 - 21017634
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag-ggccggggttcgaaccccagaca 286  Q
    |||||||||||||||||||||||||| || ||| |||||| ||||||| ||||    
T  21017686 ttggtaggacaatgcattattatatgtagtggctggggtttgaaccccggaca 21017634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 263
Target Start/End: Original strand, 23648344 - 23648372
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag 263  Q
    |||||||||||||||||||||||||||||    
T  23648344 ttggtaggacaatgcattattatatgcag 23648372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 263
Target Start/End: Complemental strand, 23810228 - 23810200
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag 263  Q
    |||||||||||||||||||||||||||||    
T  23810228 ttggtaggacaatgcattattatatgcag 23810200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 263
Target Start/End: Complemental strand, 31934955 - 31934927
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag 263  Q
    |||||||||||||||||||||||||||||    
T  31934955 ttggtaggacaatgcattattatatgcag 31934927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 227 - 329
Target Start/End: Complemental strand, 9285747 - 9285637
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgcaggg-ccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccacta 318  Q
    ||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||       ||| | ||| |||||| ||||||||||||||    
T  9285747 tagctcaattggtaggacaatgcattattatatgcagggtctggggttcgaaccccagacaccccacttattaaccttataaggtgaattctagccacta 9285648  T
Q  319 gactacctgac 329  Q
    |||||| ||||    
T  9285647 gactacttgac 9285637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 227 - 329
Target Start/End: Original strand, 52560771 - 52560881
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccacta 318  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| || ||||       ||| | ||| |||||| ||||||||||||||    
T  52560771 tagctcaattggtaggacaatgcattattatatgcaggggccggggttcgaaccacatacacttcacttattcaccttataaggtgaattctagccacta 52560870  T
Q  319 gactacctgac 329  Q
    |||||||||||    
T  52560871 gactacctgac 52560881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 236 - 332
Target Start/End: Original strand, 10098141 - 10098245
Alignment:
Q  236 tggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacctg 327  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||| |||||       ||| ||||| |||| | |||||||||||||||||||||||    
T  10098141 tggtaggacaatgcattattatatgcaggggccgggattcgaaccccggacaccccacttattcatcttataagatgaattctagccactagactacctg 10098240  T
Q  328 accaa 332  Q
    |||||    
T  10098241 accaa 10098245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 287
Target Start/End: Complemental strand, 56546537 - 56546476
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  56546537 tagctcaattggtaggacaatgcattattatatgcaggggccggggttcgaaccacagacac 56546476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 3442858 - 3442911
Alignment:
Q  235 ttggtaggacaatgcattattatatg-cagggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  3442858 ttggtaggacaatgcattattatatgtcggggccggggttcgaaccccagacac 3442911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 326
Target Start/End: Original strand, 3465598 - 3465697
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| |||||       ||| | ||| |||||| ||||||||||||||||||||||    
T  3465598 ttggtaggacaatgcattattatatgcaggggccggagttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactagactacct 3465697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 47018026 - 47017973
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  47018026 ttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacac 47017973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 35031398 - 35031448
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagg-gccggggttcgaaccccaga 284  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  35031398 ttggtaggacaatgcattattatatgcaggagccgaggttcgaaccccaga 35031448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 548967 - 548914
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | |||||||    
T  548967 ttggtaggacaatgcattattatatgcaggggccggggttcgaaactcagacac 548914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 6053995 - 6054048
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||    
T  6053995 ttggtaggacaatgcattattatatgcaggggccggggttcgaactccaaacac 6054048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 13211432 - 13211379
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||| |||||    
T  13211432 ttggtaggacaatgcattattatatgcatgggtcggggttcgaaccccggacac 13211379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 53698056 - 53698007
Alignment:
Q  239 taggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  53698056 taggacaatgcattattatatgcaggggccggggttcgaaccccggacac 53698007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 20753205 - 20753103
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||||| |||||       ||| | ||| |||||| ||||||||||||||| ||||||    
T  20753205 ttggtaggaaaatgcattattatatgtaggggccggggttcgaaccccggacaccacacttattcaccttataaggtgaattctagccactaggctacct 20753106  T
Q  327 gac 329  Q
    |||    
T  20753105 gac 20753103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 3544512 - 3544465
Alignment:
Q  235 ttggtaggacaatgcattattatatgc-agggccggggttcgaacccc 281  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  3544512 ttggtaggacaatgcattattatatgcaaaggccggggttcgaacccc 3544465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 14149814 - 14149861
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  14149814 ggacaatgcattattatatgcaggggccggggttcgaaccccggacac 14149861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 28520805 - 28520758
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  28520805 ggacaatgcattattatatgcaggggccggggttcgaaccccggacac 28520758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 48968284 - 48968237
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  48968284 ggacaatgcattattatatgcaggggccggggttcgaaccccggacac 48968237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 265
Target Start/End: Complemental strand, 35803181 - 35803143
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgcaggg 265  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  35803181 tagctcaattggtaggacaatgcattattatatgcaggg 35803143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 5430445 - 5430392
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg-ccggggttcgaaccccagacac 287  Q
    |||||||||||||| |||||||||||||||| || ||||||||||||| |||||    
T  5430445 ttggtaggacaatgtattattatatgcagggaccagggttcgaaccccggacac 5430392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 9172451 - 9172406
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaacc 279  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||    
T  9172451 ttggtaggacaatgcattattatatgcaggggtcggggttcgaacc 9172406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 9924871 - 9924924
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||||||| |||||    
T  9924871 ttggtaggacaacgcattattatatgcaggggtcggggttcgaaccccggacac 9924924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 265
Target Start/End: Original strand, 20266866 - 20266907
Alignment:
Q  224 gcttagctaaattggtaggacaatgcattattatatgcaggg 265  Q
    |||||||| | |||||||||||||||||||||||||||||||    
T  20266866 gcttagctcatttggtaggacaatgcattattatatgcaggg 20266907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 24234154 - 24234101
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||| ||||||||||||||||||| ||||||||||| ||||||| |||||    
T  24234154 ttggtaggtcaatgcattattatatgcaggggccggggtttgaaccccggacac 24234101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 27921922 - 27921963
Alignment:
Q  246 atgcattattatatgcaggg-ccggggttcgaaccccagaca 286  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  27921922 atgcattattatatgcaggggccggggttcgaaccccagaca 27921963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 33944443 - 33944398
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaacc 279  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||    
T  33944443 ttggtaggataatgcattattatatgcaggggccggggttcgaacc 33944398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 287
Target Start/End: Original strand, 8690234 - 8690282
Alignment:
Q  240 aggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| |||||    
T  8690234 aggacaatgcattattatatgcaggggtcggggttcgaaccccggacac 8690282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 278
Target Start/End: Complemental strand, 35333068 - 35333024
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag-ggccggggttcgaac 278  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||    
T  35333068 ttggtaggacaatgcattattatatgcagtggccggagttcgaac 35333024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 46799431 - 46799475
Alignment:
Q  243 acaatgcattattatatgcagggccggggttcgaaccccagacac 287  Q
    ||||||||||||||||||||| |||| |||||||||||| |||||    
T  46799431 acaatgcattattatatgcagagccgaggttcgaaccccggacac 46799475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 265
Target Start/End: Original strand, 56314774 - 56314806
Alignment:
Q  233 aattggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||||    
T  56314774 aattggtaggacaatgcattattatatgcaggg 56314806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 9692987 - 9693030
Alignment:
Q  245 aatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||| ||||||||||||||||||| |||||    
T  9692987 aatgcattattatatgcaggggccggggttcgaaccccggacac 9693030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 35909243 - 35909196
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag-ggccggggttcgaacccc 281  Q
    ||||||||||||| ||||||||||||||| || |||||||||||||||    
T  35909243 ttggtaggacaatacattattatatgcagaggtcggggttcgaacccc 35909196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 36954158 - 36954205
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||    
T  36954158 ggacaatgcattattatatgcaggggtcggggttcgaaccccggacac 36954205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 286
Target Start/End: Complemental strand, 49089368 - 49089305
Alignment:
Q  224 gcttagctaaattggtaggacaatgcattattatatgca-gggccggggttcgaaccccagaca 286  Q
    |||||||| | ||||||||||||| |||||||||||||| ||||||  ||||||||||| ||||    
T  49089368 gcttagcttagttggtaggacaatacattattatatgcaggggccgaagttcgaacccctgaca 49089305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 53815717 - 53815764
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| |||| |||||||||||||| |||||    
T  53815717 ggacaatgcattattatatgcaggggctggggttcgaaccccggacac 53815764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 265
Target Start/End: Complemental strand, 534853 - 534815
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgcaggg 265  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  534853 tagctcaattggtaggacaatgcatcattatatgcaggg 534815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 272
Target Start/End: Complemental strand, 4722544 - 4722506
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag-ggccggggt 272  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  4722544 ttggtaggacaatgcattattatatgcagaggccggggt 4722506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Original strand, 6365339 - 6365369
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  6365339 ttggtaggacaatgcattattatatgcaggg 6365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 277
Target Start/End: Complemental strand, 12868106 - 12868064
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagggccggggttcgaa 277  Q
    ||||||||||||||||||||||||||||| || | ||||||||    
T  12868106 ttggtaggacaatgcattattatatgcagtgctgaggttcgaa 12868064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 23376199 - 23376245
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagggccggggttcgaacccc 281  Q
    |||||||||||||| ||||||||||| |||  |||||||||||||||    
T  23376199 ttggtaggacaatgtattattatatgtaggatcggggttcgaacccc 23376245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 26708625 - 26708579
Alignment:
Q  241 ggacaatgcattattatatgcagggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||   ||||||||||| |||||||    
T  26708625 ggacaatgcattattatatgcaggggttgggttcgaacctcagacac 26708579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Original strand, 32885703 - 32885733
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  32885703 ttggtaggacaatgcattattatatgcaggg 32885733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Original strand, 48309160 - 48309190
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  48309160 ttggtaggacaatgcattattatatgcaggg 48309190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Original strand, 50657895 - 50657925
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  50657895 ttggtaggacaatgcattattatatgcaggg 50657925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Original strand, 51077882 - 51077912
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  51077882 ttggtaggacaatgcattattatatgcaggg 51077912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 5635208 - 5635257
Alignment:
Q  239 taggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||| ||| |||||||| |||||| |||||    
T  5635208 taggacaatgcattattatatgcaggggtcggggttcaaaccccggacac 5635257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 280
Target Start/End: Complemental strand, 13073245 - 13073188
Alignment:
Q  224 gcttagctaaattggtaggacaatgcattattatatgcaggg-ccggggttcgaaccc 280  Q
    ||||| || |||||||| ||||||||||||||||||| ||||  ||||||||||||||    
T  13073245 gcttatctcaattggtatgacaatgcattattatatgtagggatcggggttcgaaccc 13073188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 332
Target Start/End: Original strand, 20610828 - 20610861
Alignment:
Q  299 aaggtaaattctagccactagactacctgaccaa 332  Q
    ||||| ||||||||||||||||||||||||||||    
T  20610828 aaggtgaattctagccactagactacctgaccaa 20610861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 34773759 - 34773710
Alignment:
Q  239 taggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||| |||| | |||||||||||| |||||    
T  34773759 taggacaatgcattattatatgcaggggctgaggttcgaaccccggacac 34773710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 281
Target Start/End: Original strand, 36008296 - 36008337
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaacccc 281  Q
    |||||||||||| ||||||||| |||||||||||||||||||    
T  36008296 ggacaatgcattgttatatgcaggggccggggttcgaacccc 36008337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 38433330 - 38433379
Alignment:
Q  239 taggacaatgcattattatatgcagg-gccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| ||| | ||| |||||||||||||||||    
T  38433330 taggacaatgcattattatatgtaggagtcggagttcgaaccccagacac 38433379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 265
Target Start/End: Original strand, 44074869 - 44074898
Alignment:
Q  236 tggtaggacaatgcattattatatgcaggg 265  Q
    ||||||||||||||||||||||||||||||    
T  44074869 tggtaggacaatgcattattatatgcaggg 44074898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 45350291 - 45350344
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag-ggccggggttcgaaccccagacac 287  Q
    ||||||||||| ||||||||||||||||| || ||| ||||||||||| |||||    
T  45350291 ttggtaggacagtgcattattatatgcagaggtcggagttcgaaccccggacac 45350344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 45359770 - 45359823
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag-ggccggggttcgaaccccagacac 287  Q
    ||||||||||| ||||||||||||||||| || ||| ||||||||||| |||||    
T  45359770 ttggtaggacagtgcattattatatgcagaggtcggagttcgaaccccggacac 45359823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 46482897 - 46482852
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagg-gccggggttcgaacc 279  Q
    ||||||||||||| |||||||||||||||| ||||| |||||||||    
T  46482897 ttggtaggacaatacattattatatgcaggagccggtgttcgaacc 46482852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 52031230 - 52031275
Alignment:
Q  243 acaatgcattattatatgcagggc-cggggttcgaaccccagacac 287  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||    
T  52031230 acaatgcattagtatatgcaggggtcggggttcgaaccccagacac 52031275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 52608647 - 52608594
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| ||  ||| ||||||||||| |||||    
T  52608647 ttggtaggacaatgcattattatatgcatggatcggagttcgaaccccggacac 52608594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 30369361 - 30369393
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagggcc 267  Q
    |||||||||||||||||| ||||||||||||||    
T  30369361 ttggtaggacaatgcattgttatatgcagggcc 30369393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 34106625 - 34106669
Alignment:
Q  243 acaatgcattattatatgcagggccggggttcgaaccccagacac 287  Q
    ||||||||||||||||||||| |   |||||||||||||||||||    
T  34106625 acaatgcattattatatgcagaggtcgggttcgaaccccagacac 34106669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 265
Target Start/End: Complemental strand, 35451203 - 35451171
Alignment:
Q  233 aattggtaggacaatgcattattatatgcaggg 265  Q
    |||||||| ||||||||||||||||||||||||    
T  35451203 aattggtatgacaatgcattattatatgcaggg 35451171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 287
Target Start/End: Complemental strand, 37032254 - 37032206
Alignment:
Q  240 aggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||||||||||||||||||||| ||| |||| |||||||||| |||||    
T  37032254 aggacaatgcattattatatgcaggggtcgggattcgaaccccggacac 37032206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 278
Target Start/End: Complemental strand, 40200836 - 40200792
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaac 278  Q
    |||||||||||||||||||||||||||| |  |||||||||||||    
T  40200836 ttggtaggacaatgcattattatatgcatgatccggggttcgaac 40200792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 265
Target Start/End: Complemental strand, 49280751 - 49280719
Alignment:
Q  233 aattggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||| ||||||||||||||||    
T  49280751 aattggtaggacaatgaattattatatgcaggg 49280719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 287
Target Start/End: Complemental strand, 56531311 - 56531263
Alignment:
Q  240 aggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||||||||||| ||||||||| |||||||||||||||| || |||||    
T  56531311 aggacaatgcattgttatatgcaggggccggggttcgaactccggacac 56531263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 4798621 - 4798516
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||| |||||       ||| | ||| |||||| ||||||||||||||||||||||    
T  4798621 ttggtaggataatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttgtaaggtgaattctagccactagactacct 4798522  T
Q  327 gaccaa 332  Q
    ||||||    
T  4798521 gaccaa 4798516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 9524972 - 9525025
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9524972 ttggtaggacaatgcattattatatgcaggggccggggttcgaaccccagacac 9525025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 24608563 - 24608510
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24608563 ttggtaggacaatgcattattatatgcaggggccggggttcgaaccccagacac 24608510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 15042445 - 15042392
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  15042445 ttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacac 15042392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 43847717 - 43847764
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaacccc 281  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  43847717 ttggtaggacaatgcattattatatgcaggggccggggttcgaacccc 43847764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 287
Target Start/End: Complemental strand, 10199819 - 10199769
Alignment:
Q  238 gtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  10199819 gtaggacaatgcattattatatgcaggggccggggttcgaaccccaaacac 10199769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 23857404 - 23857301
Alignment:
Q  235 ttggtaggacaatgcattattatatgca--gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacc 325  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||| | |||||       ||| ||||| || ||| ||||||||||||||| |||||    
T  23857404 ttggtaggacaatgcattattatatgcagggggccggggttcgaacctcggacacccgacttattcatcttatacggtgaattctagccactaggctacc 23857305  T
Q  326 tgac 329  Q
    ||||    
T  23857304 tgac 23857301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 329
Target Start/End: Original strand, 25119221 - 25119325
Alignment:
Q  233 aattggtaggacaatgcattattatatgca-gggccggggttcgaaccccagaca-------cattgatcttttaaggtaaattctagccactagactac 324  Q
    |||||||||||||||||||||||||||||| |||  |||||||||||||| ||||       |||| | ||| ||| ||||||||||||||||| |||||    
T  25119221 aattggtaggacaatgcattattatatgcaggggttggggttcgaaccccggacatcccactcattcaccttgtaatgtaaattctagccactaaactac 25119320  T
Q  325 ctgac 329  Q
    |||||    
T  25119321 ctgac 25119325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 323
Target Start/End: Original strand, 6064381 - 6064488
Alignment:
Q  224 gcttagctaaattggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagcca 315  Q
    |||||||| ||||||| |||||||||||||||||||||| ||| ||||||||||||| | |||||       ||| | ||| |||||| |||||||||||    
T  6064381 gcttagctcaattggttggacaatgcattattatatgcaggggtcggggttcgaacctcggacacttcacttattcagcttataaggtgaattctagcca 6064480  T
Q  316 ctagacta 323  Q
    ||||||||    
T  6064481 ctagacta 6064488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 17980297 - 17980350
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||| |||||    
T  17980297 ttggtaggacaaagcattattatatgcaggggccggggttcgaaccccggacac 17980350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 30942681 - 30942632
Alignment:
Q  233 aattggtaggacaatgcattattatatgca-gggccggggttcgaacccc 281  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  30942681 aattgataggacaatgcattattatatgcaggggccggggttcgaacccc 30942632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 7649544 - 7649588
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagggccggggttcgaacc 279  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||    
T  7649544 ttggtaggacaatgcattattatatgtagggctggggttcgaacc 7649588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 2696554 - 2696601
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  2696554 ggacaatgcattattatatgcaggggccggggttcgaaccccggacac 2696601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 2800040 - 2800087
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  2800040 ggacaatgcattattatatgcaggggccggggttcgaaccccggacac 2800087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 8034549 - 8034592
Alignment:
Q  239 taggacaatgcattattatatgcagg-gccggggttcgaacccc 281  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  8034549 taggacaatgcattattatatgcaggagccggggttcgaacccc 8034592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 14683900 - 14683943
Alignment:
Q  243 acaatgcattattatatgcagggccggggttcgaaccccagaca 286  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||    
T  14683900 acaatgcattattatatgcagggtcggggttcgaaccccggaca 14683943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 277
Target Start/End: Complemental strand, 39484450 - 39484407
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaa 277  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  39484450 ttggtaggacaatgcattattatatgcaggggccggggttcgaa 39484407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 286
Target Start/End: Original strand, 4293904 - 4293950
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagaca 286  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  4293904 ggacaatgcattattatatgcaggggtcggggttcgaaccccagaca 4293950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 17987529 - 17987476
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||||||| |||||    
T  17987529 ttggtaggataatgcattattatatgcaggggccggagttcgaaccccggacac 17987476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 21133591 - 21133546
Alignment:
Q  243 acaatgcattattatatgcagg-gccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| | |||||||||||||||||||||    
T  21133591 acaatgcattattatatgcaggagtcggggttcgaaccccagacac 21133546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 38790647 - 38790599
Alignment:
Q  241 ggacaatgcattattatatgcaggg--ccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||  | ||||||||||||||||||||    
T  38790647 ggacaatgcattattatatgcaggggccgggggttcgaaccccagacac 38790599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 265
Target Start/End: Original strand, 2376531 - 2376563
Alignment:
Q  233 aattggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||||    
T  2376531 aattggtaggacaatgcattattatatgcaggg 2376563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 279
Target Start/End: Original strand, 1588788 - 1588827
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaacc 279  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  1588788 ggacaatgcattattatatgcaggggccggggttcgaacc 1588827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 332
Target Start/End: Complemental strand, 13537383 - 13537286
Alignment:
Q  243 acaatgcattattatatgcagg-gccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacctgaccaa 332  Q
    |||||||||| ||||||||||| | |||||||||||||||||||||       ||| ||||| |||||| |||| ||||||||| ||||| |||||||    
T  13537383 acaatgcattgttatatgcaggtgtcggggttcgaaccccagacaccccacttattcatcttataaggtgaattgtagccactaaactacttgaccaa 13537286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 332
Target Start/End: Complemental strand, 13626931 - 13626834
Alignment:
Q  243 acaatgcattattatatgcagg-gccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacctgaccaa 332  Q
    |||||||||| ||||||||||| | |||||||||||||||||||||       ||| ||||| |||||| |||| ||||||||| ||||| |||||||    
T  13626931 acaatgcattgttatatgcaggtgtcggggttcgaaccccagacaccccacttattcatcttataaggtgaattgtagccactaaactacttgaccaa 13626834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 277
Target Start/End: Complemental strand, 26703970 - 26703927
Alignment:
Q  235 ttggtaggacaatgcattattatatgc-agggccggggttcgaa 277  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  26703970 ttggtaggacaatgcattattatatgcaagggtcggggttcgaa 26703927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 5184967 - 5184921
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccc 280  Q
    |||||||||||||| ||||||||||||| |||| |||||||||||||    
T  5184967 ttggtaggacaatggattattatatgcaggggctggggttcgaaccc 5184921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Complemental strand, 7540568 - 7540538
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  7540568 ttggtaggacaatgcattattatatgcaggg 7540538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Complemental strand, 13762592 - 13762562
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  13762592 ttggtaggacaatgcattattatatgcaggg 13762562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 287
Target Start/End: Original strand, 26657882 - 26657924
Alignment:
Q  246 atgcattattatatgcaggg-ccggggttcgaaccccagacac 287  Q
    ||||||| |||||||||||| ||||||||||||||||||||||    
T  26657882 atgcattgttatatgcagggaccggggttcgaaccccagacac 26657924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Original strand, 28465633 - 28465663
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  28465633 ttggtaggacaatgcattattatatgcaggg 28465663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Complemental strand, 41089230 - 41089200
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  41089230 ttggtaggacaatgcattattatatgcaggg 41089200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 277
Target Start/End: Complemental strand, 18009789 - 18009752
Alignment:
Q  241 ggacaatgcattattatatgcaggg-ccggggttcgaa 277  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  18009789 ggacaatgcattattatatgcagggtccggggttcgaa 18009752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 25689468 - 25689415
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||||||||| |||||||||||||| | |||||| |||||||||||| |||||    
T  25689468 ttggtaggacactgcattattatatgtaggggccgaggttcgaaccccggacac 25689415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 34631999 - 34632052
Alignment:
Q  225 cttagctaaattggtaggacaatgcattattatatgca-gggccggggttcgaa 277  Q
    |||||||  |||||| |||||||||||||||||||||| ||||||| |||||||    
T  34631999 cttagctcgattggttggacaatgcattattatatgcaggggccggtgttcgaa 34632052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 329
Target Start/End: Original strand, 39258660 - 39258697
Alignment:
Q  292 atcttttaaggtaaattctagccactagactacctgac 329  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  39258660 atcttataaggtaaattctagccactaggctacctgac 39258697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 44136357 - 44136304
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||  ||||||||||||| |||| | ||||||||||||||||||    
T  44136357 ttggtaggacaatatattattatatgcaggggctgaggttcgaaccccagacac 44136304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 287
Target Start/End: Original strand, 1503944 - 1503980
Alignment:
Q  252 tattatatgcagg-gccggggttcgaaccccagacac 287  Q
    ||||||||||||| |||||||||||||||||||||||    
T  1503944 tattatatgcaggagccggggttcgaaccccagacac 1503980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 2386082 - 2386046
Alignment:
Q  18 aaatgaaagaaagaaaacaacaattttaccaaattaa 54  Q
    |||||||||||||| || |||||||||||||||||||    
T  2386082 aaatgaaagaaagagaataacaattttaccaaattaa 2386046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 281
Target Start/End: Original strand, 5323944 - 5323984
Alignment:
Q  242 gacaatgcattattatatgca-gggccggggttcgaacccc 281  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  5323944 gacaatgcattattatatgcaggggtcggggttcgaacccc 5323984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 287
Target Start/End: Original strand, 7765678 - 7765714
Alignment:
Q  252 tattatatgcagg-gccggggttcgaaccccagacac 287  Q
    ||||||||||||| |||||||||||||||||||||||    
T  7765678 tattatatgcaggagccggggttcgaaccccagacac 7765714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 287
Target Start/End: Complemental strand, 13702423 - 13702379
Alignment:
Q  244 caatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||||    
T  13702423 caatgcattattatatgcaggggtcggggttcgaacctcagacac 13702379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 287
Target Start/End: Original strand, 26022282 - 26022318
Alignment:
Q  252 tattatatgcaggg-ccggggttcgaaccccagacac 287  Q
    |||||||||||||| ||||||||||||||||||||||    
T  26022282 tattatatgcaggggccggggttcgaaccccagacac 26022318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 263
Target Start/End: Complemental strand, 40249960 - 40249932
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag 263  Q
    |||||||||||||||||||||||||||||    
T  40249960 ttggtaggacaatgcattattatatgcag 40249932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 41793060 - 41793005
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgcagg-gccggggttcgaacccca 282  Q
    ||||| |||||| |||||| |||||| ||||||||||| ||||||||||||||||||    
T  41793060 tagctcaattggcaggaca-tgcattgttatatgcaggagccggggttcgaacccca 41793005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 278
Target Start/End: Complemental strand, 42761945 - 42761901
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaac 278  Q
    |||||| ||||||||||||||||||||| ||| ||||||||||||    
T  42761945 ttggtatgacaatgcattattatatgcagggggcggggttcgaac 42761901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 42762042 - 42762010
Alignment:
Q  297 ttaaggtaaattctagccactagactacctgac 329  Q
    ||||||| |||||||||||||||||||||||||    
T  42762042 ttaaggtgaattctagccactagactacctgac 42762010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 227 - 332
Target Start/End: Complemental strand, 22966046 - 22965933
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccacta 318  Q
    ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||       ||| | ||| |||||| ||||||| ||||||    
T  22966046 tagctcaattggtaggacaatgcattattatatgcaggggccgaggttcgaaccccagacaccccacttattcaccttataaggtgaattctaaccacta 22965947  T
Q  319 gactacctgaccaa 332  Q
    |||||| |||||||    
T  22965946 gactacatgaccaa 22965933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 30644184 - 30644289
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||       ||| | ||| |||||| ||||||||||||||| |||||     
T  30644184 ttggtaggacaatgcattattatatgcaggggccggtgttcgaaccccagacaccccacttattcaccttataaggtgaattctagccactagtctaccg 30644283  T
Q  327 gaccaa 332  Q
    ||||||    
T  30644284 gaccaa 30644289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 287
Target Start/End: Complemental strand, 2261572 - 2261511
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||    
T  2261572 tagctcaattggtaggacaatgcattattatatgcaggggccggggttcgaatcccggacac 2261511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 287
Target Start/End: Original strand, 5787468 - 5787529
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||    
T  5787468 tagctcaattggtaggacaatgcattattatatgcaggggccggggtttgaaccccaaacac 5787529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 23685630 - 23685581
Alignment:
Q  239 taggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23685630 taggacaatgcattattatatgcaggggccggggttcgaaccccagacac 23685581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 47552228 - 47552281
Alignment:
Q  235 ttggtaggacaatgcattattatatgc-agggccggggttcgaaccccagacac 287  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  47552228 ttggtaggacaatgcattattatatgcaagggccggggttcgaaccccggacac 47552281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 332
Target Start/End: Complemental strand, 44437902 - 44437809
Alignment:
Q  238 gtaggacaatgcattattatatgca-gggccggggttcgaaccccagacacattgatcttttaaggtaaattctagccactagactacctgaccaa 332  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||      ||| |||| | ||||||||||||||| ||||||||||||    
T  44437902 gtaggacaatgcattattatatgcaggggccggggttcgaaccccggacac--cccacttataagatgaattctagccactaggctacctgaccaa 44437809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 34948121 - 34948226
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag-ggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||||| |||||       ||| | ||| |||||| ||||||||||||||| ||||||    
T  34948121 ttggtaggacaatgcattatcatatgcagtggccgaggttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacct 34948220  T
Q  327 gaccaa 332  Q
    ||||||    
T  34948221 gaccaa 34948226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 8725217 - 8725171
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagggccggggttcgaacccc 281  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||    
T  8725217 ttggtaggacgatgcattattatatgcaggaccggggttcgaacccc 8725171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 27047795 - 27047750
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaacc 279  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  27047795 ttggtaggacaatgcattattatatgcaggggccggggttcgaacc 27047750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 17900959 - 17900912
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaacccc 281  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||    
T  17900959 ttggtaggacaatgcattattatatgcaggggccggggctcgaacccc 17900912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 14967714 - 14967611
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac--------attgatcttttaaggtaaattctagccactagactacc 325  Q
    |||||||||||||||||||||||||| | ||| ||||||| ||||| |||||||        ||| | ||| |||||| |||||||||||||||||||||    
T  14967714 ttggtaggacaatgcattattatatgtaggggtcggggtttgaacctcagacacctcactttattcaacttataaggtgaattctagccactagactacc 14967615  T
Q  326 tgac 329  Q
    ||||    
T  14967614 tgac 14967611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 15397190 - 15397087
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac--------attgatcttttaaggtaaattctagccactagactacc 325  Q
    |||||||||||||||||||||||||| | ||| ||||||| ||||| |||||||        ||| | ||| |||||| |||||||||||||||||||||    
T  15397190 ttggtaggacaatgcattattatatgtaggggtcggggtttgaacctcagacacctcactttattcaacttataaggtgaattctagccactagactacc 15397091  T
Q  326 tgac 329  Q
    ||||    
T  15397090 tgac 15397087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 29710180 - 29710080
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacctg 327  Q
    |||||||||||||||||||||||||| ||||| | ||||||||| | ||||||       ||| ||||| |||||| ||||||||||||||  |||||||    
T  29710180 ttggtaggacaatgcattattatatgtagggctgaggttcgaactctagacactccacttattcatcttataaggtgaattctagccactaagctacctg 29710081  T
Q  328 a 328  Q
    |    
T  29710080 a 29710080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 46337948 - 46337902
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg-ccggggttcgaaccc 280  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||    
T  46337948 ttggtaggacaatgcattattatatgcagggatcggggttcgaaccc 46337902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 46716348 - 46716394
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag-ggccggggttcgaaccc 280  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||    
T  46716348 ttggtaggacaatgcattattatatgcagaggtcggggttcgaaccc 46716394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 287
Target Start/End: Original strand, 24479590 - 24479651
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||| ||||||||||||| |||||||||||||| | |||| |||||||||||||| |||||    
T  24479590 tagctcaattggtaggacagtgcattattatatggaggggctggggttcgaaccccggacac 24479651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 36316054 - 36316009
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaacc 279  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||    
T  36316054 ttggtaggataatgcattattatatgcaggggccggggttcgaacc 36316009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 332
Target Start/End: Original strand, 38451884 - 38451983
Alignment:
Q  241 ggacaatgcattattatatgcaggg-ccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacctgaccaa 332  Q
    |||||||||||| |||||||||||| |||||||||||| ||| |||||       ||| |  || |||||| ||||||||||||||||||||||||||||    
T  38451884 ggacaatgcattgttatatgcaggggccggggttcgaatcccggacaccccacttattcacattataaggtgaattctagccactagactacctgaccaa 38451983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 45011738 - 45011693
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag-ggccggggttcgaacc 279  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||    
T  45011738 ttggtaggacaatgcattattatatgcagaggccagggttcgaacc 45011693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 332
Target Start/End: Complemental strand, 29658345 - 29658247
Alignment:
Q  242 gacaatgcattattatatgcaggg-ccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacctgaccaa 332  Q
    ||||||||||| |||||||||||| |||||||||||||||| |||||       ||| | ||| |||||| ||||||||||||||| |||| |||||||    
T  29658345 gacaatgcattgttatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacttgaccaa 29658247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 38778759 - 38778707
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagaca 286  Q
    |||||||||||||||||||||||||||| |||||| ||||| |||||| ||||    
T  38778759 ttggtaggacaatgcattattatatgcaggggccgaggttctaaccccggaca 38778707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 4818035 - 4818089
Alignment:
Q  235 ttggtaggacaatgcattattatatgc--agggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||   |||||| ||||||||| ||||||||    
T  4818035 ttggtaggacaatgcattattatatgcggggggccgtggttcgaactccagacac 4818089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 277
Target Start/End: Original strand, 8195930 - 8195973
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaa 277  Q
    ||||||||||||||||||||||||| || |||||||||||||||    
T  8195930 ttggtaggacaatgcattattatatccaggggccggggttcgaa 8195973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 8903863 - 8903820
Alignment:
Q  246 atgcattattatatgcagggccggggttcgaaccccagacacat 289  Q
    ||||||| |||||||||||  |||||||||||||||||||||||    
T  8903863 atgcattgttatatgcaggatcggggttcgaaccccagacacat 8903820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 21285427 - 21285380
Alignment:
Q  241 ggacaatgcattattatatgcaggg-ccggggttcgaaccccagacac 287  Q
    |||||||||||| |||||||||||| |||||||||||||||| |||||    
T  21285427 ggacaatgcattgttatatgcaggggccggggttcgaaccccggacac 21285380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Complemental strand, 4590686 - 4590656
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  4590686 ttggtaggacaatgcattattatatgcaggg 4590656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 287
Target Start/End: Original strand, 7465492 - 7465534
Alignment:
Q  246 atgcattattatatgcaggg-ccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||| |||||||||||||||| |||||    
T  7465492 atgcattattatatgcaggggccggggttcgaaccccggacac 7465534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Original strand, 21086119 - 21086149
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  21086119 ttggtaggacaatgcattattatatgcaggg 21086149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Original strand, 22047535 - 22047565
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  22047535 ttggtaggacaatgcattattatatgcaggg 22047565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 329
Target Start/End: Complemental strand, 24440945 - 24440915
Alignment:
Q  299 aaggtaaattctagccactagactacctgac 329  Q
    |||||||||||||||||||||||||||||||    
T  24440945 aaggtaaattctagccactagactacctgac 24440915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Complemental strand, 27907976 - 27907946
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  27907976 ttggtaggacaatgcattattatatgcaggg 27907946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 29778988 - 29779026
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgcaggg 265  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  29778988 tagctcaattggtaggataatgcattattatatgcaggg 29779026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 281
Target Start/End: Original strand, 30152745 - 30152803
Alignment:
Q  224 gcttagctaaattggtaggacaatgcattattatatgca-gggccggggttcgaacccc 281  Q
    |||||||| | |||||||||||||||||||||||||  | ||| |||||||||||||||    
T  30152745 gcttagctcagttggtaggacaatgcattattatatataggggtcggggttcgaacccc 30152803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 2366376 - 2366425
Alignment:
Q  239 taggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||| ||| |||||||||||| | ||||||    
T  2366376 taggacaatgcattattatatgcaggggtcggggttcgaactctagacac 2366425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 277
Target Start/End: Complemental strand, 27957675 - 27957634
Alignment:
Q  237 ggtaggacaatgcattattatatgc-agggccggggttcgaa 277  Q
    |||||||||||| |||||||||||| ||||||||||||||||    
T  27957675 ggtaggacaatgtattattatatgcaagggccggggttcgaa 27957634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 34960992 - 34960947
Alignment:
Q  243 acaatgcattattatatgcagg-gccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| ||||||||||||| ||| |||||    
T  34960992 acaatgcattattatatgcaggagccggggttcgaatcccggacac 34960947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 47355835 - 47355876
Alignment:
Q  246 atgcattattatatgcaggg-ccggggttcgaaccccagaca 286  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  47355835 atgcattgttatatgcaggggccggggttcgaaccccagaca 47355876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 11808042 - 11808106
Alignment:
Q  224 gcttagctaaattggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||| ||||||||||   ||||||| ||||||||| ||| ||||||||||||||| |||||    
T  11808042 gcttagctcaattggtagggacatgcattgttatatgcaggggtcggggttcgaaccccggacac 11808106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 287
Target Start/End: Complemental strand, 12640624 - 12640588
Alignment:
Q  252 tattatatgcagg-gccggggttcgaaccccagacac 287  Q
    ||||||||||||| |||||||||||||||||||||||    
T  12640624 tattatatgcaggagccggggttcgaaccccagacac 12640588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 21925482 - 21925514
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatat 259  Q
    ||||| |||||||||||||||||||||||||||    
T  21925482 tagctcaattggtaggacaatgcattattatat 21925514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 263
Target Start/End: Original strand, 22741218 - 22741246
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag 263  Q
    |||||||||||||||||||||||||||||    
T  22741218 ttggtaggacaatgcattattatatgcag 22741246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 287
Target Start/End: Complemental strand, 30388542 - 30388506
Alignment:
Q  252 tattatatgcaggg-ccggggttcgaaccccagacac 287  Q
    |||||||||||||| ||||||||||||||||||||||    
T  30388542 tattatatgcaggggccggggttcgaaccccagacac 30388506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 288
Target Start/End: Original strand, 30566524 - 30566572
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacaca 288  Q
    |||||||||||| ||||||| | ||||||||||||||||||| ||||||    
T  30566524 ggacaatgcattgttatatgtaagggccggggttcgaaccccggacaca 30566572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 30748053 - 30748001
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgcagggccggggttcgaacc 279  Q
    ||||| |||||||| || | |||||||||||||||| ||||||| ||||||||    
T  30748053 tagctcaattggtatgatactgcattattatatgcaaggccgggattcgaacc 30748001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 263
Target Start/End: Complemental strand, 34962052 - 34962024
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag 263  Q
    |||||||||||||||||||||||||||||    
T  34962052 ttggtaggacaatgcattattatatgcag 34962024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 281
Target Start/End: Original strand, 35195869 - 35195905
Alignment:
Q  246 atgcattattatatgca-gggccggggttcgaacccc 281  Q
    ||||||||||||||||| |||||||||||||||||||    
T  35195869 atgcattattatatgcaggggccggggttcgaacccc 35195905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 287
Target Start/End: Original strand, 48719834 - 48719870
Alignment:
Q  252 tattatatgcagg-gccggggttcgaaccccagacac 287  Q
    ||||||||||||| |||||||||||||||||||||||    
T  48719834 tattatatgcaggagccggggttcgaaccccagacac 48719870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 5e-16; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 43566876 - 43566771
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||| |||||||       ||| | ||| |||||| ||||||||||||||| ||||||    
T  43566876 ttggtaggacaatgcattattatatgcaggggtcggggttcgaacctcagacaccccacttattcaccttataaggtgaattctagccactaggctacct 43566777  T
Q  327 gaccaa 332  Q
    ||||||    
T  43566776 gaccaa 43566771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 23820644 - 23820697
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  23820644 ttggtaggacaatgcattattatatgcaggggccggagttcgaaccccagacac 23820697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 33206772 - 33206875
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||| |||||       ||| | ||| |||||| ||||||||||||||| ||||||    
T  33206772 ttggtaggacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacct 33206871  T
Q  327 gacc 330  Q
    ||||    
T  33206872 gacc 33206875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 332
Target Start/End: Complemental strand, 24751337 - 24751244
Alignment:
Q  238 gtaggacaatgcattattatatgca-gggccggggttcgaaccccagacacattgatcttttaaggtaaattctagccactagactacctgaccaa 332  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||      ||| |||| | ||||||||||||||| ||||||||||||    
T  24751337 gtaggacaatgcattattatatgcaggggccggggttcgaaccccggacac--cccacttataagatgaattctagccactaggctacctgaccaa 24751244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 53467964 - 53468008
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagggccggggttcgaacc 279  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  53467964 ttggtaggacaatgcattattatatgcaggggcggggttcgaacc 53468008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 332
Target Start/End: Original strand, 14417875 - 14417988
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccacta 318  Q
    ||||| |||||||||||||||||||||||||||||| |||| || ||||||||||| |||||       ||| | ||| |||||| ||||||||||||||    
T  14417875 tagctcaattggtaggacaatgcattattatatgcaggggctggagttcgaaccccggacaccccacttattcaccttataaggtgaattctagccacta 14417974  T
Q  319 gactacctgaccaa 332  Q
      ||||||||||||    
T  14417975 agctacctgaccaa 14417988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 20244149 - 20244196
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaacccc 281  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  20244149 ttggtaggacaatgcattattatatgcaggggccggggttcgaacccc 20244196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 326
Target Start/End: Original strand, 35483287 - 35483383
Alignment:
Q  238 gtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    ||||||||||||||||||||||||| ||| ||||||||||| ||| |||||       ||| | ||| |||||||||||||||||||||||||||||    
T  35483287 gtaggacaatgcattattatatgcaggggtcggggttcgaatcccggacaccccacttattcaccttataaggtaaattctagccactagactacct 35483383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 36727542 - 36727438
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacctg 327  Q
    |||||||||||||||||||||||||||| || ||||||||||||| | |||||       ||| ||||| |||||| ||||||||||||||   ||||||    
T  36727542 ttggtaggacaatgcattattatatgcaaggtcggggttcgaacctcggacaccccacttattcatcttataaggtgaattctagccactaagttacctg 36727443  T
Q  328 accaa 332  Q
    |||||    
T  36727442 accaa 36727438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 39492840 - 39492889
Alignment:
Q  239 taggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  39492840 taggacaatgcattattatatgcatgggctggggttcgaaccccagacac 39492889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 49146099 - 49146152
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||| |||||    
T  49146099 ttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccggacac 49146152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 286
Target Start/End: Original strand, 38176069 - 38176121
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg-ccggggttcgaaccccagaca 286  Q
    |||||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  38176069 ttggtaggacaatgcaatattatatgctggggccggggttcgaaccccagaca 38176121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 9625004 - 9625051
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  9625004 ggacaatgcattattatatgcaggggccggggttcgaaccccggacac 9625051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 13540044 - 13539939
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||||||||||||||||||||| | |||  |||||||||||||| |||||       ||| | ||| |||||| ||||||||||| ||||||||||    
T  13540044 ttggtaggacaatgcattattatatgtaggggttggggttcgaaccccggacaccccacttatttaccttataaggtgaattctagccattagactacct 13539945  T
Q  327 gaccaa 332  Q
    ||||||    
T  13539944 gaccaa 13539939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 27183755 - 27183708
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  27183755 ggacaatgcattattatatgcaggggccggggttcgaaccccggacac 27183708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 40786295 - 40786346
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagac 285  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  40786295 ttggtaggacaatgcattattatatgcatgggtcggggttcgaacctcagac 40786346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 49639043 - 49639090
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaacccc 281  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||    
T  49639043 ttggtaggacaatgcattattatatgtaggggccggggttcgaacccc 49639090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 329
Target Start/End: Original strand, 31698550 - 31698650
Alignment:
Q  237 ggtaggacaatgcattattatatgcagg-gccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacctga 328  Q
    ||||||| |||||||||||||||||||| ||||||||||||||| |  ||||       ||| ||||| |||||| ||||||||||||||||||| ||||    
T  31698550 ggtaggataatgcattattatatgcaggagccggggttcgaacctcgaacaccccacttattcatcttataaggtgaattctagccactagactatctga 31698649  T
Q  329 c 329  Q
    |    
T  31698650 c 31698650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 276
Target Start/End: Original strand, 34503230 - 34503272
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagg-gccggggttcga 276  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  34503230 ttggtaggacaatgcattattatatgcaggagccggggttcga 34503272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 281
Target Start/End: Original strand, 14868706 - 14868747
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaacccc 281  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  14868706 ggacaatgcattattatatgcaggggccggggttcgaacccc 14868747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 35849359 - 35849306
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg-ccggggttcgaaccccagacac 287  Q
    ||||||||||||||||||||||||||||||| | | |||||||||| |||||||    
T  35849359 ttggtaggacaatgcattattatatgcagggactgtggttcgaacctcagacac 35849306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 41121886 - 41121939
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag-ggccggggttcgaaccccagacac 287  Q
    ||||||||||||||||||||||||||||| || |||||||| |||||| |||||    
T  41121886 ttggtaggacaatgcattattatatgcagaggtcggggttcaaaccccggacac 41121939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 42271093 - 42271040
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| || |||||    
T  42271093 ttggtaggacaatgcattgttatatgcaggggccggggttcgaactccggacac 42271040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 7448437 - 7448393
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccaga 284  Q
    |||||||||||||||||||||| |||||||| |||||||||||||    
T  7448437 ggacaatgcattattatatgcaggggccgggattcgaaccccaga 7448393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 7456579 - 7456535
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccaga 284  Q
    |||||||||||||||||||||| |||||||| |||||||||||||    
T  7456579 ggacaatgcattattatatgcaggggccgggattcgaaccccaga 7456535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 47062146 - 47062094
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagggccggggttcgaaccccagacac 287  Q
    ||||||||||||||||||||||||||  ||| ||| ||||||||||| |||||    
T  47062146 ttggtaggacaatgcattattatatgatgggtcggagttcgaaccccggacac 47062094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 3955327 - 3955376
Alignment:
Q  241 ggacaatgcattattatatgca---gggccggggttcgaaccccagacac 287  Q
    ||||||||||||||||||||||   ||||||||||||||||||| |||||    
T  3955327 ggacaatgcattattatatgcaggggggccggggttcgaaccccggacac 3955376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 19540356 - 19540403
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagg-gccggggttcgaacccc 281  Q
    ||||||||||||| |||||||||||||||| || ||||||||||||||    
T  19540356 ttggtaggacaatacattattatatgcaggagctggggttcgaacccc 19540403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 33072309 - 33072348
Alignment:
Q  239 taggacaatgcattattatatgcagggccggggttcgaac 278  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  33072309 taggacaatgcattattatatgcaggggccgggttcgaac 33072348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 36331800 - 36331753
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||    
T  36331800 ggacaatgcattattatatgcaggggtcggggttcgaaccccggacac 36331753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 43774206 - 43774253
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||||||    
T  43774206 ggacaatgcattgttatatgcaggggtcggggttcgaaccccagacac 43774253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 52030142 - 52030189
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  52030142 ggacaatgtattattatatgcaggggccggggttcgaaccccggacac 52030189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 287
Target Start/End: Complemental strand, 54021369 - 54021334
Alignment:
Q  252 tattatatgcagggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||| |||||||||||||||||    
T  54021369 tattatatgcagggccggagttcgaaccccagacac 54021334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Complemental strand, 17440045 - 17440015
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  17440045 ttggtaggacaatgcattattatatgcaggg 17440015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Complemental strand, 32876196 - 32876166
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  32876196 ttggtaggacaatgcattattatatgcaggg 32876166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 15498224 - 15498273
Alignment:
Q  238 gtaggacaatgcattattatatgca-gggccggggttcgaaccccagaca 286  Q
    ||||||||||||||||||||||| | ||||||| ||||||||||| ||||    
T  15498224 gtaggacaatgcattattatatgtaggggccggagttcgaaccccggaca 15498273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 16006586 - 16006533
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagg-gccggggttcgaaccccagacac 287  Q
    ||||||| |||||||||||| ||||||| | | |||||||||||||||||||||    
T  16006586 ttggtagaacaatgcattataatatgcaagagtcggggttcgaaccccagacac 16006533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 21420278 - 21420241
Alignment:
Q  226 ttagctaaattggtaggacaatgcattattatatgcag 263  Q
    |||||| | |||||||||||||||||||||||||||||    
T  21420278 ttagctcagttggtaggacaatgcattattatatgcag 21420241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 264
Target Start/End: Original strand, 29507232 - 29507261
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagg 264  Q
    ||||||||||||||||||||||||||||||    
T  29507232 ttggtaggacaatgcattattatatgcagg 29507261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 281
Target Start/End: Original strand, 36476380 - 36476421
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaacccc 281  Q
    |||||||||||||||||||||| ||||||| |||||||||||    
T  36476380 ggacaatgcattattatatgcaggggccggagttcgaacccc 36476421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 45713495 - 45713548
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||| | ||||||| |||||||| || |||||    
T  45713495 ttggtaggacaatgcattattatatgtaggggccggagttcgaactccggacac 45713548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 260
Target Start/End: Original strand, 53472631 - 53472664
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatg 260  Q
    ||||| ||||||||||||||||||||||||||||    
T  53472631 tagcttaattggtaggacaatgcattattatatg 53472664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 286
Target Start/End: Original strand, 8475430 - 8475482
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag-ggccggggttcgaaccccagaca 286  Q
    |||||||||||||||||||| |||||||| || ||||||| ||| ||||||||    
T  8475430 ttggtaggacaatgcattatgatatgcagaggtcggggtttgaatcccagaca 8475482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 287
Target Start/End: Original strand, 47098767 - 47098803
Alignment:
Q  252 tattatatgcaggg-ccggggttcgaaccccagacac 287  Q
    |||||||||||||| ||||||||||||||||||||||    
T  47098767 tattatatgcaggggccggggttcgaaccccagacac 47098803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 263
Target Start/End: Original strand, 47427740 - 47427768
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag 263  Q
    |||||||||||||||||||||||||||||    
T  47427740 ttggtaggacaatgcattattatatgcag 47427768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 580863 - 580758
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||       ||| | ||| |||| | ||||||||||||||| ||||||    
T  580863 ttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataagatgaattctagccactaggctacct 580764  T
Q  327 gaccaa 332  Q
    ||||||    
T  580763 gaccaa 580758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 17154664 - 17154769
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||       ||| | ||| |||||| | ||||||||||||| ||||||    
T  17154664 ttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgagttctagccactaggctacct 17154763  T
Q  327 gaccaa 332  Q
    ||||||    
T  17154764 gaccaa 17154769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 20122555 - 20122454
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||| |||||       ||| ||||| |||||| ||||||||||||||| ||||||    
T  20122555 ttggtaggacaatgcattattatatgtaggggccggggttcgaaccccggacacgccacttattcatcttataaggtgaattctagccactaggctacct 20122456  T
Q  327 ga 328  Q
    ||    
T  20122455 ga 20122454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 10262754 - 10262807
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  10262754 ttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccagacac 10262807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 30474275 - 30474222
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  30474275 ttggtaggacaatgcattattatatgcaggggccgaggttcgaaccccagacac 30474222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 286
Target Start/End: Complemental strand, 32527151 - 32527105
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagaca 286  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  32527151 ggacaatgcattattatatgcaggggccggggttcgaaccccagaca 32527105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 22297532 - 22297479
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||| |||||    
T  22297532 ttggtaggacaatgcattattatatgcaggggcaggggttcgaaccccggacac 22297479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 26807164 - 26807115
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccag 283  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  26807164 ttggtaggacaatgcattattatatgcaggggccagggttcgaaccccag 26807115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 16028188 - 16028136
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag-ggccggggttcgaaccccagaca 286  Q
    ||||||||||||||||||||||||||||| || |||||||||||| |||||||    
T  16028188 ttggtaggacaatgcattattatatgcagtggtcggggttcgaactccagaca 16028136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 34620533 - 34620635
Alignment:
Q  235 ttggtaggacaatgcattattatatgc-agggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    ||||||||||||||||||||||||||| ||||  |||||| |||||||||||||       ||| | ||| |||||| |||||||||||||||||||| |    
T  34620533 ttggtaggacaatgcattattatatgcaagggttggggtttgaaccccagacactctatttattcaccttataaggtgaattctagccactagactactt 34620632  T
Q  327 gac 329  Q
    |||    
T  34620633 gac 34620635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 24034133 - 24034039
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacacattgatcttttaaggtaaattctagccactagactacctgac 329  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||| | ||||| |  |  | || | || |||||||||||||||||||||||||    
T  24034133 ttggtaggacaatgcattattatatgcaggggtcggggttcgaacctcggacac-tccacttattcacgtgaattctagccactagactacctgac 24034039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 29034997 - 29035044
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  29034997 ggacaatgcattattatatgcaggggccggggttcgaaccccggacac 29035044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 327
Target Start/End: Complemental strand, 8234872 - 8234772
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    ||||||||||||| |||||||||||| | ||||||||||||||||||| |||||       ||| | ||| |||||| ||||||||||||||| ||||||    
T  8234872 ttggtaggacaatacattattatatgtaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacct 8234773  T
Q  327 g 327  Q
    |    
T  8234772 g 8234772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 25050320 - 25050266
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacaca 288  Q
    ||||||||| |||||||||||||||||| ||| |||| |||||||||||||||||    
T  25050320 ttggtaggataatgcattattatatgcaggggtcgggattcgaaccccagacaca 25050266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 34034372 - 34034418
Alignment:
Q  241 ggacaatgcattattatatgcagggccggggttcgaaccccagacac 287  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||    
T  34034372 ggacaatacattattatatgcaggaccggggttcgaaccccggacac 34034418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 36665448 - 36665490
Alignment:
Q  238 gtaggacaatgcattattatatgca-gggccggggttcgaacc 279  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  36665448 gtaggacaatgcattattatatgcaggggccggggttcgaacc 36665490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 287
Target Start/End: Complemental strand, 18386900 - 18386839
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||| |||||||||||||||||||||||||||| | |||| ||||||||||| || |||||    
T  18386900 tagctcaattggtaggacaatgcattattatatgtaggggctggggttcgaactccggacac 18386839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 36481084 - 36481137
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| |||| || |||||||||||| ||||    
T  36481084 ttggtaggacaatgcattattatatgcatgggctggagttcgaaccccaaacac 36481137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 36520860 - 36520807
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||| | ||| ||||||||||||||| |||||    
T  36520860 ttggtaggacaatgcattattatatgtaggggtcggggttcgaaccccggacac 36520807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 44422122 - 44422175
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg-ccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||||||  ||| ||||||||||| |||||    
T  44422122 ttggtaggacaatgcattattatatgcagggatcggagttcgaaccccggacac 44422175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 3179339 - 3179441
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    ||||||| |||||||||||||||||||| ||| || |||||||||| |||||||       ||| | ||| |||||| ||||||||||||||| ||||||    
T  3179339 ttggtagaacaatgcattattatatgcaggggtcgaggttcgaacctcagacaccccacttattcaccttataaggtgaattctagccactaggctacct 3179438  T
Q  327 gac 329  Q
    |||    
T  3179439 gac 3179441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 7086268 - 7086370
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||| ||||||||||||||||||| |||||||| ||||||||||  ||||       ||| | ||| |||||| ||||||| ||||||||||||||    
T  7086268 ttggtagggcaatgcattattatatgcaggggccgggattcgaaccccgaacaccccaattattcaccttataaggtgaattctaaccactagactacct 7086367  T
Q  327 gac 329  Q
    |||    
T  7086368 gac 7086370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 265
Target Start/End: Complemental strand, 19052693 - 19052661
Alignment:
Q  233 aattggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||||    
T  19052693 aattggtaggacaatgcattattatatgcaggg 19052661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 32891296 - 32891398
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||||||||||||||||||||||| ||| |||  |||||||||| |||||       ||| ||||| |||| | ||||||||||||||| ||||||    
T  32891296 ttggtaggacaatgcattattatatgcaggggtcggttttcgaaccccggacaccccacttattcatcttataagatgaattctagccactaggctacct 32891395  T
Q  327 gac 329  Q
    |||    
T  32891396 gac 32891398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 287
Target Start/End: Original strand, 43870973 - 43871021
Alignment:
Q  240 aggacaatgcattattatatgcagg-gccggggttcgaaccccagacac 287  Q
    ||||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  43870973 aggacaatgcattattatatgcaggagccggggttcgaatcccggacac 43871021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 2114515 - 2114414
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    ||||||| |||||||||||||||||| | ||| ||||||||||||||| |||||       ||| | ||| |||||| ||||||||||||| ||||||||    
T  2114515 ttggtagaacaatgcattattatatgtaggggtcggggttcgaaccccggacacctcatttattcaccttataaggtgaattctagccactggactacct 2114416  T
Q  327 ga 328  Q
    ||    
T  2114415 ga 2114414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 3037696 - 3037649
Alignment:
Q  241 ggacaatgcattattatatgcaggg-ccggggttcgaaccccagacac 287  Q
    |||||||||||| |||||||||||| |||||||||||||||| |||||    
T  3037696 ggacaatgcattgttatatgcaggggccggggttcgaaccccggacac 3037649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 9796918 - 9796965
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||    
T  9796918 ggacaatgcattattatatgcaggggtcggggttcgaaccccggacac 9796965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 9802913 - 9802960
Alignment:
Q  241 ggacaatgcattattatatgc-agggccggggttcgaaccccagacac 287  Q
    ||||||||||||||||||||| |||| ||||||||||||||| |||||    
T  9802913 ggacaatgcattattatatgcaagggtcggggttcgaaccccggacac 9802960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 19905735 - 19905630
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    ||||| ||||||||||||||||||| || ||| ||||||||||||||| |||||       ||| | ||| |||||| ||||||||||| ||| ||||||    
T  19905735 ttggttggacaatgcattattatatacaggggtcggggttcgaaccccggacacccgacttattcaccttataaggtgaattctagccattaggctacct 19905636  T
Q  327 gaccaa 332  Q
    ||||||    
T  19905635 gaccaa 19905630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 277
Target Start/End: Original strand, 32943354 - 32943397
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag-ggccggggttcgaa 277  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||    
T  32943354 ttggtaggacaatgcattattatatgcagaggctggggttcgaa 32943397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 328
Target Start/End: Complemental strand, 33001633 - 33001532
Alignment:
Q  235 ttggtaggacaatgcattattatatgc-agggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||| ||| |||||       ||| ||||| |||||| ||||||||| ||||| ||||||    
T  33001633 ttggtaggacaatgcgttattatatgcaagggccggggtttgaatcccggacaccccacttattcatcttataaggtgaattctagctactaggctacct 33001534  T
Q  327 ga 328  Q
    ||    
T  33001533 ga 33001532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 44187729 - 44187772
Alignment:
Q  245 aatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  44187729 aatgcattattatatgcaggggtcggggttcgaaccccagacac 44187772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 265
Target Start/End: Complemental strand, 2558346 - 2558308
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgcaggg 265  Q
    ||||| |||||||||||||||||||||||||||| ||||    
T  2558346 tagctcaattggtaggacaatgcattattatatgtaggg 2558308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 3364740 - 3364832
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactag 319  Q
    ||||||||||||| |||||||||||||| |||||| |||||||||   ||||||       ||| |||||||||||| |||||||||||||||    
T  3364740 ttggtaggacaatacattattatatgcaggggccgaggttcgaactttagacaccccacttattcatcttttaaggtgaattctagccactag 3364832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 287
Target Start/End: Complemental strand, 17119507 - 17119448
Alignment:
Q  226 ttagctaaattggtaggacaatgcattattatatgcagggccggggttcgaaccccagacac 287  Q
    |||||| | |||||||||||||| |||||||||||||  || |||||||||||||| |||||    
T  17119507 ttagcttagttggtaggacaatgtattattatatgca--gctggggttcgaaccccggacac 17119448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Original strand, 22538554 - 22538584
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  22538554 ttggtaggacaatgcattattatatgcaggg 22538584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Original strand, 27495553 - 27495583
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  27495553 ttggtaggacaatgcattattatatgcaggg 27495583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 29664624 - 29664720
Alignment:
Q  241 ggacaatgcattattatatgcagggc-cggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacctgac 329  Q
    |||||||||||| ||||||||||||  |||||||| || ||| |||||       ||| ||||| |||||| |||||||||||||||||||||||||    
T  29664624 ggacaatgcattgttatatgcaggggtcggggttcaaatcccggacaccccacttattcatcttataaggtgaattctagccactagactacctgac 29664720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Original strand, 31564110 - 31564140
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  31564110 ttggtaggacaatgcattattatatgcaggg 31564140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 42091354 - 42091308
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagg-gccggggttcgaaccc 280  Q
    ||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  42091354 ttggtaggacaatgcattattatattcaggagccggagttcgaaccc 42091308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 1836603 - 1836656
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagg-gccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||| |||   ||||||||||||||| |||||    
T  1836603 ttggtaggacaatgcattattatatgaaggaatcggggttcgaaccccggacac 1836656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 4157729 - 4157676
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagg-gccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||| ||| || || ||||||||||| |||||    
T  4157729 ttggtaggacaatgcattattatatgtaggtgctggagttcgaaccccggacac 4157676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 288
Target Start/End: Complemental strand, 17974883 - 17974838
Alignment:
Q  244 caatgcattattatatgcag-ggccggggttcgaaccccagacaca 288  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||||    
T  17974883 caatgcattgttatatgcagaggccgaggttcgaaccccagacaca 17974838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 281
Target Start/End: Complemental strand, 21970513 - 21970472
Alignment:
Q  241 ggacaatgcattattatatgcaggg-ccggggttcgaacccc 281  Q
    |||||||||||||||||||||||||  |||||||||||||||    
T  21970513 ggacaatgcattattatatgcagggatcggggttcgaacccc 21970472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 287
Target Start/End: Original strand, 34830613 - 34830654
Alignment:
Q  246 atgcattattatatgcagggccggggttcgaaccccagacac 287  Q
    ||||||| ||||||||||||||||||||||||| || |||||    
T  34830613 atgcattgttatatgcagggccggggttcgaactccggacac 34830654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 38530286 - 38530245
Alignment:
Q  224 gcttagctaaattggtaggacaatgcattattatatgcaggg 265  Q
    |||||||| | ||||||||||||||||||||||||| |||||    
T  38530286 gcttagctcagttggtaggacaatgcattattatatacaggg 38530245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 44721784 - 44721739
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaacc 279  Q
    ||||||| |||||||||||||||||||| ||| |||||||||||||    
T  44721784 ttggtagaacaatgcattattatatgcaggggtcggggttcgaacc 44721739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 45523680 - 45523733
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||| || |||||||||| ||| |||||||||||||||| ||||    
T  45523680 ttggtaggacaatgtataattatatgcaggggtcggggttcgaaccccaaacac 45523733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 287
Target Start/End: Complemental strand, 8250336 - 8250300
Alignment:
Q  252 tattatatgcaggg-ccggggttcgaaccccagacac 287  Q
    |||||||||||||| ||||||||||||||||||||||    
T  8250336 tattatatgcaggggccggggttcgaaccccagacac 8250300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 278
Target Start/End: Original strand, 31956881 - 31956925
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaac 278  Q
    |||||||||||||||||||||||||| | |||| |||||||||||    
T  31956881 ttggtaggacaatgcattattatatgtaggggctggggttcgaac 31956925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 287
Target Start/End: Original strand, 34355756 - 34355792
Alignment:
Q  252 tattatatgcaggg-ccggggttcgaaccccagacac 287  Q
    |||||||||||||| ||||||||||||||||||||||    
T  34355756 tattatatgcaggggccggggttcgaaccccagacac 34355792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 35049229 - 35049185
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagggccggggttcgaacc 279  Q
    ||||||| ||||||||||||||||| || || |||||||||||||    
T  35049229 ttggtagaacaatgcattattatatacaaggtcggggttcgaacc 35049185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 287
Target Start/End: Original strand, 36005477 - 36005513
Alignment:
Q  252 tattatatgcagg-gccggggttcgaaccccagacac 287  Q
    ||||||||||||| |||||||||||||||||||||||    
T  36005477 tattatatgcaggagccggggttcgaaccccagacac 36005513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 40044154 - 40044110
Alignment:
Q  240 aggacaatgcattattatatgca-gggccggggttcgaaccccag 283  Q
    ||||||||| ||||||||||||| ||| |||||||||||||||||    
T  40044154 aggacaatgtattattatatgcaggggtcggggttcgaaccccag 40044110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 287
Target Start/End: Original strand, 5311 - 5371
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgcagggccggggttcgaaccccagacac 287  Q
    ||||| ||||||||||||||||||||||||||||||||| | | ||||||||||| |||||    
T  5311 tagctcaattggtaggacaatgcattattatatgcaggggccgtgttcgaaccccggacac 5371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 9064887 - 9064934
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  9064887 ggacaatgcattattatatgcaggggccggggttcgaaccccagacac 9064934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 10377204 - 10377157
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag-ggccggggttcgaacccc 281  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10377204 ttggtaggacaatgcattattatatgcagaggccggggttcgaacccc 10377157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 12089112 - 12089217
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| |||||       ||| | ||| |||||| |||||||||||||||  |||||    
T  12089112 ttggtaggacaatgcattattatatgcaggggccggagttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggatacct 12089211  T
Q  327 gaccaa 332  Q
    ||||||    
T  12089212 gaccaa 12089217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 332
Target Start/End: Complemental strand, 25020607 - 25020503
Alignment:
Q  236 tggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacctg 327  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||||| |||||       ||| | ||| |||||| ||||||||||||||| |||||||    
T  25020607 tggtaggacgatgcattattatatgcaggggcctgggttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggctacctg 25020508  T
Q  328 accaa 332  Q
    |||||    
T  25020507 accaa 25020503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 9491815 - 9491762
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||| |||||    
T  9491815 ttggtaggacaatgcattattatatgtaggggccggggttcgaaccccggacac 9491762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 19642627 - 19642574
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||    
T  19642627 ttggtaggacaatgcattattatatgcatcggtcggggttcgaaccccagacac 19642574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 12127989 - 12127887
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||||||||||||||||||||||| ||| |||  |||||||||| |||||       ||| | ||| |||||| ||||||||||||||||||||||    
T  12127989 ttggtaggacaatgcattattatatgcaggggtcggaattcgaaccccggacacgccacttattcaccttataaggtgaattctagccactagactacct 12127890  T
Q  327 gac 329  Q
    |||    
T  12127889 gac 12127887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 18904763 - 18904658
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||||||||||||||||||||| | |||||||||||||||| |  |||||       ||| | ||| |||||| ||||||||||||||| ||||||    
T  18904763 ttggtaggacaatgcattattatatgtatgggccggggttcgaactctggacaccccacttattcaccttataaggtgaattctagccactaggctacct 18904664  T
Q  327 gaccaa 332  Q
    ||||||    
T  18904663 gaccaa 18904658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 18244092 - 18244046
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag-ggccggggttcgaaccc 280  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||    
T  18244092 ttggtaggacaatgcattattatatgcagaggtcggggttcgaaccc 18244046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 23771040 - 23771078
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgcaggg 265  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  23771040 tagctcaattggtaggacaatgcattattatatgcaggg 23771078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 9438317 - 9438370
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||| |||||    
T  9438317 ttggtaggacaatgcattattatatgcaggggttggggttcgaaccccggacac 9438370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 10373610 - 10373663
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||||| |||||    
T  10373610 ttggtagaacaatgcattattatatgcaggggtcggggttcgaaccccggacac 10373663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 12101901 - 12101954
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||||||||||| |||||||||||||| ||||||| ||||||||||| |||||    
T  12101901 ttggtaggacaatacattattatatgcaggggccggcgttcgaaccccggacac 12101954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 22983599 - 22983648
Alignment:
Q  239 taggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  22983599 taggacaatgtattattatatgcaggggccggggttcgaaccccggacac 22983648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 23804809 - 23804760
Alignment:
Q  239 taggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  23804809 taggacaatgtattattatatgcaggggccggggttcgaaccccggacac 23804760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 34365750 - 34365795
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaacc 279  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||    
T  34365750 ttggtaggacaatgcattattatgtgcaggggccggggttcgaacc 34365795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 6652225 - 6652277
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagggccggggttcgaaccccagacac 287  Q
    ||||||||||||||||||||| |||||||||   |||||||||| ||||||||    
T  6652225 ttggtaggacaatgcattattttatgcagggttagggttcgaactccagacac 6652277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 280
Target Start/End: Complemental strand, 14981776 - 14981736
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccc 280  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  14981776 ggacaatgcattattatatgcaggggccggggttcgaaccc 14981736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 19165366 - 19165467
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag-ggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    ||||||||||||||||||||||||||||| ||  |||||||||||||| |||||       ||| | ||| |||||| ||||||||||||||| ||||||    
T  19165366 ttggtaggacaatgcattattatatgcagaggttggggttcgaacccc-gacaccccacttattcaccttataaggtgaattctagccactagtctacct 19165464  T
Q  327 gac 329  Q
    |||    
T  19165465 gac 19165467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 329
Target Start/End: Complemental strand, 22389830 - 22389728
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||||||||||||||||||||||||| ||| | ||||||||| ||| |||||       ||| | ||| |||||| |||||||||| |||||||||||    
T  22389830 ttggtaggacaatgcattattatatgcaggggtcagggttcgaatcccggacaccccacttattcaccttataaggtgaattctagccgctagactacct 22389731  T
Q  327 gac 329  Q
    |||    
T  22389730 gac 22389728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 287
Target Start/End: Complemental strand, 26598681 - 26598621
Alignment:
Q  227 tagctaaattggtaggacaatgcattattatatgcagggccggggttcgaaccccagacac 287  Q
    ||||| |||||||||||||||||||||||||||| |||| | || ||||||| ||| ||||    
T  26598681 tagctcaattggtaggacaatgcattattatatgtaggggccggattcgaactccaaacac 26598621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 22501033 - 22501079
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg--ccggggttcgaacc 279  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||    
T  22501033 ttggtaggacaatgcattattatatgcaggggtccgggattcgaacc 22501079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 24623537 - 24623584
Alignment:
Q  235 ttggtaggacaatgcattattatatgc-agggccggggttcgaacccc 281  Q
    ||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  24623537 ttggtaggacaatgcattattatatgcaagggtcggggttcgagcccc 24623584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 34396098 - 34396203
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac-------attgatcttttaaggtaaattctagccactagactacct 326  Q
    |||||| ||||||||||||||||||||| ||||||| |||||||| || |||||       ||| | ||| |||||| ||||||| ||| ||||||||||    
T  34396098 ttggtacgacaatgcattattatatgcaggggccggagttcgaactccggacaccctatttattcaccttataaggtgaattctaaccaatagactacct 34396197  T
Q  327 gaccaa 332  Q
    ||||||    
T  34396198 gaccaa 34396203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 265
Target Start/End: Complemental strand, 5288425 - 5288395
Alignment:
Q  235 ttggtaggacaatgcattattatatgcaggg 265  Q
    |||||||||||||||||||||||||||||||    
T  5288425 ttggtaggacaatgcattattatatgcaggg 5288395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 9424460 - 9424506
Alignment:
Q  236 tggtaggacaatgcattattatatgcag-ggccggggttcgaacccc 281  Q
    ||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  9424460 tggtatgacaatgaattattatatgcagaggccggggttcgaacccc 9424506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 284
Target Start/End: Original strand, 32057053 - 32057099
Alignment:
Q  239 taggacaatgcattattatatgcag-ggccggggttcgaaccccaga 284  Q
    ||||||||||||||||||||||||| || || |||||||||||||||    
T  32057053 taggacaatgcattattatatgcagtggtcgaggttcgaaccccaga 32057099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 15289035 - 15288982
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||||||||| |||||||||||||| | |||| ||||||||||| ||||||||    
T  15289035 ttggtaggacattgcattattatatgtaggggctggggttcgaactccagacac 15288982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 753394 - 753346
Alignment:
Q  233 aattggtaggacaatgcattattatatgca-gggccggggttcgaaccc 280  Q
    ||||||||||||||| |||||||||||| | ||| ||||||||||||||    
T  753394 aattggtaggacaatacattattatatgtaggggtcggggttcgaaccc 753346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 6025466 - 6025414
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagaca 286  Q
    ||||||||| |||||||||||||||||| ||| |||| |||||||||| ||||    
T  6025466 ttggtaggataatgcattattatatgcaggggtcgggattcgaaccccggaca 6025414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 15126258 - 15126310
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagggccggggttcgaaccccagacac 287  Q
    ||||||||||||| |||||||||||| ||||  ||||||||||| || |||||    
T  15126258 ttggtaggacaatacattattatatgtaggggaggggttcgaactccggacac 15126310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 263
Target Start/End: Original strand, 30566073 - 30566101
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag 263  Q
    |||||||||||||||||||||||||||||    
T  30566073 ttggtaggacaatgcattattatatgcag 30566101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 280
Target Start/End: Complemental strand, 31949899 - 31949859
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccc 280  Q
    |||||||||||||||||||||| ||| ||||||||||||||    
T  31949899 ggacaatgcattattatatgcaggggtcggggttcgaaccc 31949859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1990 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1990
Description:

Target: scaffold1990; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 909 - 962
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  909 ttggtaggacaatgcattattatatgcaggggctggggttcgaatcccagacac 962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 47397 - 47344
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  47397 ttggtaggacaatgcattattatatgcaggggctggggttcgaatcccagacac 47344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 43776 - 43732
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagggccggggttcgaacc 279  Q
    |||||||||||||||||||||||||||||| | ||||||||||||    
T  43776 ttggtaggacaatgcattattatatgcaggactggggttcgaacc 43732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 7097 - 7144
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  7097 ggacaatgcattattatatgcaggggccggggttcgaaccccggacac 7144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 282
Target Start/End: Original strand, 101847 - 101894
Alignment:
Q  236 tggtaggacaatgcattattatatgca-gggccggggttcgaacccca 282  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||    
T  101847 tggtaggataatgcattattatatgcaggggccggggttcgaacccca 101894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 4879 - 4833
Alignment:
Q  241 ggacaatgcattattatatgcagggccggggttcgaaccccagacac 287  Q
    ||||||||||||||||||||||||| ||||||||||| ||| |||||    
T  4879 ggacaatgcattattatatgcaggggcggggttcgaatcccggacac 4833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 16862 - 16908
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagggccggggttcgaacccc 281  Q
    |||||||||||||||||||||||||||||||   |||||||||||||    
T  16862 ttggtaggacaatgcattattatatgcaggggtcgggttcgaacccc 16908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 287
Target Start/End: Complemental strand, 18020 - 17958
Alignment:
Q  227 tagctaaattggtagg-acaatgcattattatatgcagggcc-ggggttcgaaccccagacac 287  Q
    ||||| |||||||||| |||||||||| |||||||||||| | ||||||||||||||||||||    
T  18020 tagctcaattggtagggacaatgcattgttatatgcaggggctggggttcgaaccccagacac 17958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Complemental strand, 7097 - 7051
Alignment:
Q  236 tggtaggacaatgcattattatatgca-gggccggggttcgaacccc 281  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||    
T  7097 tggtaggacaatgcattattatatgcaggggcgggggttcgaacccc 7051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 159029 - 159074
Alignment:
Q  235 ttggtaggacaatgcattattatatgca-gggccggggttcgaacc 279  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||    
T  159029 ttggtaggacaatgcattattatatgcaggggccgggtttcgaacc 159074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 287
Target Start/End: Complemental strand, 37093 - 37041
Alignment:
Q  236 tggtaggacaatgcattattatatgcagg-gccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||| ||||||    
T  37093 tggtaggacaatgcattattatatccaggatccggggttcgaacccaagacac 37041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 25047 - 25094
Alignment:
Q  241 ggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    |||||||||||||||||||||| |||| |||||||||||||| |||||    
T  25047 ggacaatgcattattatatgcaggggctggggttcgaaccccggacac 25094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 4342 - 4391
Alignment:
Q  239 taggacaatgcattattatatgca-gggccggggttcgaaccccagacac 287  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||| |||||    
T  4342 taggacaatacattattatatgcaggggtcggggttcgaaccccggacac 4391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 16084 - 16132
Alignment:
Q  239 taggacaatgcattattatatgcaggg-ccggggttcgaaccccagaca 286  Q
    |||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  16084 taggacaatgcattattatatgcagggatcggagttcgaaccccggaca 16132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1086 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 263
Target Start/End: Original strand, 2503 - 2531
Alignment:
Q  235 ttggtaggacaatgcattattatatgcag 263  Q
    |||||||||||||||||||||||||||||    
T  2503 ttggtaggacaatgcattattatatgcag 2531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 287
Target Start/End: Original strand, 56358 - 56394
Alignment:
Q  252 tattatatgcaggg-ccggggttcgaaccccagacac 287  Q
    |||||||||||||| ||||||||||||||||||||||    
T  56358 tattatatgcaggggccggggttcgaaccccagacac 56394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 330
Target Start/End: Original strand, 49906 - 49938
Alignment:
Q  298 taaggtaaattctagccactagactacctgacc 330  Q
    |||||| ||||||||||||||||||||||||||    
T  49906 taaggtgaattctagccactagactacctgacc 49938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 111777 - 111725
Alignment:
Q  235 ttggtaggacaatgcattattatatgcagggccggggttcgaaccccagacac 287  Q
    ||||||| ||||| |||||||||||||||||  ||| |||||||||| |||||    
T  111777 ttggtagaacaatacattattatatgcagggttgggattcgaaccccggacac 111725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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