View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0913_low_36 (Length: 348)

Name: NF0913_low_36
Description: NF0913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0913_low_36
NF0913_low_36
[»] chr3 (7 HSPs)
chr3 (106-300)||(19908094-19908288)
chr3 (207-274)||(17791360-17791427)
chr3 (207-274)||(19099800-19099867)
chr3 (207-271)||(22924343-22924407)
chr3 (207-271)||(13926430-13926494)
chr3 (207-271)||(13928828-13928892)
chr3 (238-274)||(16359186-16359222)
[»] chr4 (9 HSPs)
chr4 (107-306)||(30275526-30275724)
chr4 (207-274)||(11556403-11556470)
chr4 (188-270)||(16284588-16284670)
chr4 (188-274)||(18220349-18220435)
chr4 (231-274)||(11097992-11098035)
chr4 (221-274)||(12229369-12229422)
chr4 (220-261)||(18556507-18556548)
chr4 (238-274)||(15872455-15872491)
chr4 (238-274)||(15890047-15890083)
[»] chr5 (4 HSPs)
chr5 (220-274)||(13937402-13937456)
chr5 (188-261)||(24759259-24759332)
chr5 (207-271)||(23960485-23960549)
chr5 (220-261)||(17458420-17458461)
[»] scaffold0166 (1 HSPs)
scaffold0166 (188-261)||(1753-1826)
[»] chr2 (4 HSPs)
chr2 (108-243)||(29637503-29637641)
chr2 (220-274)||(24786632-24786686)
chr2 (222-274)||(44586046-44586098)
chr2 (232-274)||(23656056-23656098)
[»] scaffold0145 (1 HSPs)
scaffold0145 (188-270)||(13047-13129)
[»] chr7 (5 HSPs)
chr7 (188-274)||(37945376-37945462)
chr7 (231-274)||(4531368-4531411)
chr7 (207-274)||(13477235-13477302)
chr7 (207-274)||(20026459-20026526)
chr7 (166-246)||(2889135-2889215)
[»] scaffold0737 (1 HSPs)
scaffold0737 (231-274)||(3265-3308)
[»] chr1 (1 HSPs)
chr1 (210-274)||(1566666-1566730)
[»] chr6 (2 HSPs)
chr6 (231-274)||(8403392-8403435)
chr6 (207-272)||(10906305-10906370)
[»] chr8 (1 HSPs)
chr8 (232-272)||(29294341-29294381)


Alignment Details
Target: chr3 (Bit Score: 159; Significance: 1e-84; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 106 - 300
Target Start/End: Original strand, 19908094 - 19908288
Alignment:
Q  106 gaaaagaagataacaaataatggtttataatgactaatgataacaataaggactggtaatgagagattagaaccctaaaatgtaatgaagttttaatggg 205  Q
    ||||| ||||||||||||||||||||||||||| | ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||    
T  19908094 gaaaaaaagataacaaataatggtttataatgattgatgataacaataatgaatggtaatgagagattagaaccctaaaatgtaatgaagttttattggg 19908193  T
Q  206 aaaagttgctgacatcgaaagtaacgataaggtgagataataactttaaattagaaataagttaagattttagaaatgctcgatattataaatga 300  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  19908194 gaaagttgctgacatcgaaagtaacgataaggtgagataataactttaaattagaaataagttaagattttggaaatggtcgatattataaatga 19908288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 17791427 - 17791360
Alignment:
Q  207 aaagttgctgacatcgaaagtaacgataaggtgagataataactttaaattagaaataagttaagatt 274  Q
    |||||||||||  |||||| ||| ||||||||||||||| |||||||||||||||  |||||||||||    
T  17791427 aaagttgctgaagtcgaaactaatgataaggtgagataacaactttaaattagaacaaagttaagatt 17791360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 19099867 - 19099800
Alignment:
Q  207 aaagttgctgacatcgaaagtaacgataaggtgagataataactttaaattagaaataagttaagatt 274  Q
    |||||||||||  |||||| ||| ||||||||||||||| |||||||||||||||  |||||||||||    
T  19099867 aaagttgctgaagtcgaaactaatgataaggtgagataacaactttaaattagaacaaagttaagatt 19099800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 22924407 - 22924343
Alignment:
Q  207 aaagttgctgacatcgaaagtaacgataaggtgagataataactttaaattagaaataagttaag 271  Q
    ||||||| |||  ||||||||||| ||||| |||||||||||||||||| |||||  ||||||||    
T  22924407 aaagttgttgaagtcgaaagtaactataagatgagataataactttaaaatagaatgaagttaag 22924343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 271
Target Start/End: Original strand, 13926430 - 13926494
Alignment:
Q  207 aaagttgctgacatcgaaagtaacgataaggtgagataataactttaaattagaaataagttaag 271  Q
    |||||||||||  || |||||||||||||| || | ||||||||||||| |||||  ||||||||    
T  13926430 aaagttgctgaagtcaaaagtaacgataagatggggtaataactttaaaatagaatgaagttaag 13926494  T

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Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 271
Target Start/End: Original strand, 13928828 - 13928892
Alignment:
Q  207 aaagttgctgacatcgaaagtaacgataaggtgagataataactttaaattagaaataagttaag 271  Q
    |||||||||||  |||||||||| |||||| || | ||||||||||||| |||||  ||||||||    
T  13928828 aaagttgctgaagtcgaaagtaaagataagatggggtaataactttaaaatagaatgaagttaag 13928892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 16359186 - 16359222
Alignment:
Q  238 tgagataataactttaaattagaaataagttaagatt 274  Q
    |||||||||||||||||||||| | ||||||||||||    
T  16359186 tgagataataactttaaattaggattaagttaagatt 16359222  T

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Target: chr4 (Bit Score: 80; Significance: 2e-37; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 30275526 - 30275724
Alignment:
Q  107 aaaagaagataacaaataatggtttataatgactaatgataacaataaggactggtaatgagagattagaaccctaaaatgtaatgaagttttaatggga 206  Q
    |||||||||||| | ||||| || |||||||  | | ||||| ||||| ||||||||| |||| |||| ||||||||||| ||||||||||||| |||||    
T  30275526 aaaagaagataagagataatagtatataatgtttgacgataataataacgactggtaacgagatattaaaaccctaaaatataatgaagttttagtggga 30275625  T
Q  207 aaagttgctgacatcgaaagtaacgataaggtgagataataactttaaattagaaataagttaagattttagaaatgctcgatattataaatgatgatga 306  Q
    || |||| |||| |||||||||| |||||||||| ||||||||||||||||||||  ||||||||||| ||| |||| ||| | ||||| |||| |||||    
T  30275626 aa-gttgatgacgtcgaaagtaatgataaggtgaaataataactttaaattagaatgaagttaagattataggaatggtcggtgttatagatgacgatga 30275724  T

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Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 11556470 - 11556403
Alignment:
Q  207 aaagttgctgacatcgaaagtaacgataaggtgagataataactttaaattagaaataagttaagatt 274  Q
    |||||||||||  |||||| ||| |||| ||||||||||||||||||||||||||  |||||||||||    
T  11556470 aaagttgctgaagtcgaaattaatgatatggtgagataataactttaaattagaatgaagttaagatt 11556403  T

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Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 16284588 - 16284670
Alignment:
Q  188 taatgaagttttaatgggaaaagttgctgacatcgaaagtaacgataaggtgagataataactttaaattagaaataagttaa 270  Q
    ||||||||||||| || | ||||||| |||  | ||||||||||||||| |||||||||||||||||| |||||  |||||||    
T  16284588 taatgaagttttagtgaggaaagttgttgaagttgaaagtaacgataagatgagataataactttaaaatagaatgaagttaa 16284670  T

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Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 18220349 - 18220435
Alignment:
Q  188 taatgaagttttaatgggaaaagttgctgacatcgaaagtaacgataaggtgagataataactttaaattagaaataagttaagatt 274  Q
    ||||| ||| ||| || ||||||||| |||  |||||| ||| ||||||||||||||||||||||| |||||||  |||||||||||    
T  18220349 taatgtagtcttagtgagaaaagttgttgaagtcgaaattaatgataaggtgagataataactttatattagaatgaagttaagatt 18220435  T

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Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 274
Target Start/End: Original strand, 11097992 - 11098035
Alignment:
Q  231 gataaggtgagataataactttaaattagaaataagttaagatt 274  Q
    |||||||||||||||||||||||||||||||  |||||||||||    
T  11097992 gataaggtgagataataactttaaattagaacgaagttaagatt 11098035  T

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Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 12229422 - 12229369
Alignment:
Q  221 cgaaagtaacgataaggtgagataataactttaaattagaaataagttaagatt 274  Q
    ||||||||  ||||| ||||||||||||||| ||||||| | ||||||||||||    
T  12229422 cgaaagtactgataaagtgagataataacttcaaattaggattaagttaagatt 12229369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 18556507 - 18556548
Alignment:
Q  220 tcgaaagtaacgataaggtgagataataactttaaattagaa 261  Q
    |||||||||| ||||| ||| |||||||||||||||||||||    
T  18556507 tcgaaagtaatgataaagtgcgataataactttaaattagaa 18556548  T

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Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 15872455 - 15872491
Alignment:
Q  238 tgagataataactttaaattagaaataagttaagatt 274  Q
    |||||||||||||||||||||| | ||||||||||||    
T  15872455 tgagataataactttaaattaggattaagttaagatt 15872491  T

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Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 15890047 - 15890083
Alignment:
Q  238 tgagataataactttaaattagaaataagttaagatt 274  Q
    |||||||||||||||||||||| | ||||||||||||    
T  15890047 tgagataataactttaaattaggattaagttaagatt 15890083  T

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Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 274
Target Start/End: Complemental strand, 13937456 - 13937402
Alignment:
Q  220 tcgaaagtaacgataaggtgagataataactttaaattagaaataagttaagatt 274  Q
    |||||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  13937456 tcgaaagtaatgataaggtgagataataactttaaattagaatgaagttaagatt 13937402  T

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Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 261
Target Start/End: Complemental strand, 24759332 - 24759259
Alignment:
Q  188 taatgaagttttaatgggaaaagttgctgacatcgaaagtaacgataaggtgagataataactttaaattagaa 261  Q
    ||||||||| ||| || | |||||||||||  ||||||||||||||||| |||||||||||||||||| |||||    
T  24759332 taatgaagtcttactgaggaaagttgctgaagtcgaaagtaacgataagatgagataataactttaaaatagaa 24759259  T

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Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 271
Target Start/End: Original strand, 23960485 - 23960549
Alignment:
Q  207 aaagttgctgacatcgaaagtaacgataaggtgagataataactttaaattagaaataagttaag 271  Q
    |||||||||||| || ||||||| | |||||||||||||||||||||||||||||  ||||||||    
T  23960485 aaagttgctgacgtcaaaagtaatggtaaggtgagataataactttaaattagaatgaagttaag 23960549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 17458461 - 17458420
Alignment:
Q  220 tcgaaagtaacgataaggtgagataataactttaaattagaa 261  Q
    ||||||||||| ||||| |||||||||||||||||| |||||    
T  17458461 tcgaaagtaactataagatgagataataactttaaaatagaa 17458420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 261
Target Start/End: Complemental strand, 1826 - 1753
Alignment:
Q  188 taatgaagttttaatgggaaaagttgctgacatcgaaagtaacgataaggtgagataataactttaaattagaa 261  Q
    ||||||||| ||| || | |||||||||||  ||||||||||||||||| |||||||||||||||||| |||||    
T  1826 taatgaagtcttactgaggaaagttgctgaagtcgaaagtaacgataagatgagataataactttaaaatagaa 1753  T

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Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 243
Target Start/End: Complemental strand, 29637641 - 29637503
Alignment:
Q  108 aaagaagataacaaataatggtttataatgactaatgataacaata---aggactggtaatgagagattagaaccctaaaatgtaatgaagttttaatgg 204  Q
    |||| |||||| | ||||| ||||||||||| | | ||||| ||||   | ||| |||||||||| |||||||||||||| ||||||||| ||||| |||    
T  29637641 aaagtagataagagataatagtttataatgattgacgataataatagtaatgaccggtaatgagatattagaaccctaaagtgtaatgaaattttagtgg 29637542  T
Q  205 gaaaagttgctgacatcgaaagtaacgataaggtgagat 243  Q
      |||||| ||||| | |||||||| ||||| |||||||    
T  29637541 agaaagtttctgacgttgaaagtaatgataatgtgagat 29637503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 274
Target Start/End: Complemental strand, 24786686 - 24786632
Alignment:
Q  220 tcgaaagtaacgataaggtgagataataactttaaattagaaataagttaagatt 274  Q
    |||||| ||| |||||||||||||||||||| ||||||||||  |||||||||||    
T  24786686 tcgaaattaatgataaggtgagataataactataaattagaacgaagttaagatt 24786632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 44586046 - 44586098
Alignment:
Q  222 gaaagtaacgataaggtgagataataactttaaattagaaataagttaagatt 274  Q
    |||| ||| ||| |||||||||||||||||||||||||||  |||||||||||    
T  44586046 gaaattaatgatgaggtgagataataactttaaattagaatgaagttaagatt 44586098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 274
Target Start/End: Original strand, 23656056 - 23656098
Alignment:
Q  232 ataaggtgagataataactttaaattagaaataagttaagatt 274  Q
    ||||||||||||||| ||||||||||||||  |||||||||||    
T  23656056 ataaggtgagataattactttaaattagaatgaagttaagatt 23656098  T

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Target: scaffold0145 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 13129 - 13047
Alignment:
Q  188 taatgaagttttaatgggaaaagttgctgacatcgaaagtaacgataaggtgagataataactttaaattagaaataagttaa 270  Q
    ||||||||||||| || | ||||||| |||  | ||||||||||||||| |||||||||||||||||| |||||  |||||||    
T  13129 taatgaagttttagtgaggaaagttgttgaagttgaaagtaacgataagatgagataataactttaaaatagaatgaagttaa 13047  T

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Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 37945376 - 37945462
Alignment:
Q  188 taatgaagttttaatgggaaaagttgctgacatcgaaagtaacgataaggtgagataataactttaaattagaaataagttaagatt 274  Q
    ||||||||| ||| || | |||||||||||  | |||||||| || ||||||||||||||||||||| ||||||  |||||||||||    
T  37945376 taatgaagtcttagtgaggaaagttgctgaagttgaaagtaatgaaaaggtgagataataactttaatttagaatcaagttaagatt 37945462  T

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Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 274
Target Start/End: Original strand, 4531368 - 4531411
Alignment:
Q  231 gataaggtgagataataactttaaattagaaataagttaagatt 274  Q
    |||||||||||||||||||||||||||||||  |||||||||||    
T  4531368 gataaggtgagataataactttaaattagaacgaagttaagatt 4531411  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 13477235 - 13477302
Alignment:
Q  207 aaagttgctgacatcgaaagtaacgataaggtgagataataactttaaattagaaataagttaagatt 274  Q
    |||||||||||  || ||| ||| |||||||||||||||||| ||||| ||||||  |||||||||||    
T  13477235 aaagttgctgaagtccaaattaatgataaggtgagataataagtttaatttagaacgaagttaagatt 13477302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 20026526 - 20026459
Alignment:
Q  207 aaagttgctgacatcgaaagtaacgataaggtgagataataactttaaattagaaataagttaagatt 274  Q
    ||||||| |||  |||||| ||| |||| ||||||||||||||| ||||||||||  |||||||||||    
T  20026526 aaagttgttgaagtcgaaattaatgatagggtgagataataactctaaattagaatgaagttaagatt 20026459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 2889135 - 2889215
Alignment:
Q  166 gagagattagaaccctaaaatgtaatgaagttttaatgggaaaagttgctgacatcgaaagtaacgataaggtgagataat 246  Q
    |||||| || |||||||||||| |||||||||||| || ||||||||| |||  || ||| ||| ||||||  ||||||||    
T  2889135 gagagaataaaaccctaaaatgaaatgaagttttagtgagaaaagttgttgatgtcaaaaataatgataagtcgagataat 2889215  T

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Target: scaffold0737 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 274
Target Start/End: Original strand, 3265 - 3308
Alignment:
Q  231 gataaggtgagataataactttaaattagaaataagttaagatt 274  Q
    |||||||||||||||||||||||||||||||  |||||||||||    
T  3265 gataaggtgagataataactttaaattagaacgaagttaagatt 3308  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 1566666 - 1566730
Alignment:
Q  210 gttgctgacatcgaaagtaacgataaggtgagataataactttaaattagaaataagttaagatt 274  Q
    |||||||| ||||||  ||| | ||||||| |||||||||||||||||||||  |||||||||||    
T  1566666 gttgctgaaatcgaatttaatggtaaggtgggataataactttaaattagaacgaagttaagatt 1566730  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 274
Target Start/End: Original strand, 8403392 - 8403435
Alignment:
Q  231 gataaggtgagataataactttaaattagaaataagttaagatt 274  Q
    ||||| ||||||||||||||||||||||| | ||||||||||||    
T  8403392 gataaagtgagataataactttaaattaggattaagttaagatt 8403435  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 272
Target Start/End: Original strand, 10906305 - 10906370
Alignment:
Q  207 aaagttgctgacatcgaaagtaacgataaggtgagataataactttaaattagaaataagttaaga 272  Q
    |||||||||||| | ||  |||| |||||||||| || |||||||||||||||||  |||||||||    
T  10906305 aaagttgctgacgttgagggtaatgataaggtgatatgataactttaaattagaatcaagttaaga 10906370  T

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Target: chr8 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 29294381 - 29294341
Alignment:
Q  232 ataaggtgagataataactttaaattagaaataagttaaga 272  Q
    |||||||||||||||||||||||||||| |  |||||||||    
T  29294381 ataaggtgagataataactttaaattaggacgaagttaaga 29294341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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