View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0913_low_47 (Length: 319)
Name: NF0913_low_47
Description: NF0913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0913_low_47 |
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Alignment Details
Target: chr1 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 98 - 233
Target Start/End: Complemental strand, 52796237 - 52796102
Alignment:
| Q |
98 |
ccaatcactggccaacatcttggtccaggtggaagctgatgaccaagtttcactcttatatgtttcatcaccattgccaaccacatccataccaaaacgg |
197 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
52796237 |
ccaaccactggccaacatcttggtccaggtggaagctgatgaccaagtttcactcttatatgtttcatcaccattgccaaccaaatccataccaaaacgg |
52796138 |
T |
|
| Q |
198 |
ctagtaccaaacccacaaccccgtaatattccatat |
233 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
52796137 |
ctagtaccaaacccacaaccccgtaatattccatat |
52796102 |
T |
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