View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0913_low_70 (Length: 280)

Name: NF0913_low_70
Description: NF0913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0913_low_70
NF0913_low_70
[»] chr7 (42 HSPs)
chr7 (36-157)||(4612087-4612208)
chr7 (36-159)||(31466356-31466479)
chr7 (36-157)||(19072909-19073030)
chr7 (36-157)||(36905666-36905787)
chr7 (36-157)||(47713502-47713623)
chr7 (36-157)||(48531462-48531583)
chr7 (36-159)||(36819836-36819959)
chr7 (36-157)||(47081120-47081241)
chr7 (36-157)||(23473969-23474090)
chr7 (36-157)||(31110765-31110886)
chr7 (36-157)||(37950945-37951066)
chr7 (36-157)||(42834292-42834413)
chr7 (36-157)||(47538063-47538184)
chr7 (45-158)||(28185410-28185523)
chr7 (36-157)||(36859208-36859329)
chr7 (36-157)||(37231563-37231684)
chr7 (36-128)||(44479750-44479842)
chr7 (36-158)||(32618941-32619063)
chr7 (36-157)||(2400425-2400546)
chr7 (36-157)||(10464115-10464236)
chr7 (36-157)||(42086638-42086759)
chr7 (39-143)||(21392161-21392265)
chr7 (38-159)||(34478006-34478130)
chr7 (36-157)||(35500747-35500868)
chr7 (36-126)||(18795171-18795261)
chr7 (36-126)||(46657773-46657863)
chr7 (36-128)||(36643302-36643394)
chr7 (161-222)||(35725481-35725542)
chr7 (36-126)||(44389317-44389407)
chr7 (45-126)||(33613362-33613442)
chr7 (36-126)||(31497740-31497825)
chr7 (98-157)||(24151581-24151640)
chr7 (45-115)||(3680390-3680460)
chr7 (36-77)||(29770554-29770595)
chr7 (48-157)||(42493517-42493626)
chr7 (36-123)||(2450825-2450913)
chr7 (45-157)||(16807098-16807210)
chr7 (45-110)||(30462173-30462238)
chr7 (45-110)||(40348556-40348621)
chr7 (122-163)||(42086864-42086905)
chr7 (39-99)||(28016173-28016233)
chr7 (45-165)||(38069043-38069163)
[»] chr3 (49 HSPs)
chr3 (36-157)||(54840128-54840249)
chr3 (36-157)||(21907136-21907257)
chr3 (36-157)||(38833803-38833924)
chr3 (36-157)||(45167439-45167560)
chr3 (36-157)||(7459820-7459941)
chr3 (36-160)||(8559002-8559126)
chr3 (36-159)||(51062530-51062653)
chr3 (36-157)||(10571144-10571265)
chr3 (36-157)||(18659192-18659313)
chr3 (36-157)||(29728098-29728219)
chr3 (38-157)||(52668486-52668605)
chr3 (36-157)||(37833040-37833161)
chr3 (45-165)||(48706838-48706958)
chr3 (36-146)||(1327452-1327562)
chr3 (36-157)||(32285176-32285297)
chr3 (36-143)||(43137991-43138098)
chr3 (36-157)||(17053004-17053125)
chr3 (36-157)||(32951136-32951257)
chr3 (36-146)||(38492191-38492301)
chr3 (52-154)||(47638211-47638313)
chr3 (36-153)||(36665158-36665275)
chr3 (55-159)||(53066529-53066633)
chr3 (62-157)||(34827419-34827514)
chr3 (40-146)||(25097198-25097304)
chr3 (36-157)||(46483690-46483809)
chr3 (39-159)||(49057999-49058119)
chr3 (36-126)||(35717886-35717976)
chr3 (36-157)||(3547420-3547542)
chr3 (56-157)||(4238494-4238595)
chr3 (36-157)||(54673918-54674039)
chr3 (38-146)||(48143905-48144013)
chr3 (36-157)||(7671313-7671434)
chr3 (36-95)||(27849091-27849150)
chr3 (106-157)||(10435329-10435380)
chr3 (106-159)||(27849146-27849199)
chr3 (36-100)||(3086281-3086345)
chr3 (36-128)||(15503163-15503255)
chr3 (36-95)||(10435274-10435333)
chr3 (36-115)||(5030031-5030111)
chr3 (36-112)||(48690193-48690269)
chr3 (45-159)||(9484594-9484708)
chr3 (45-159)||(29793325-29793439)
chr3 (45-159)||(34555149-34555263)
chr3 (39-128)||(39098992-39099081)
chr3 (45-158)||(42098574-42098687)
chr3 (36-112)||(45093861-45093935)
chr3 (45-110)||(50673724-50673789)
chr3 (45-157)||(29455655-29455767)
chr3 (45-157)||(49076373-49076485)
[»] chr8 (43 HSPs)
chr8 (36-158)||(3293100-3293222)
chr8 (36-157)||(37710039-37710160)
chr8 (36-155)||(38845747-38845866)
chr8 (36-157)||(8350880-8351001)
chr8 (36-157)||(30380670-30380791)
chr8 (36-159)||(23248992-23249115)
chr8 (36-157)||(30290064-30290185)
chr8 (36-157)||(38739797-38739918)
chr8 (36-157)||(43066266-43066387)
chr8 (38-154)||(40013793-40013909)
chr8 (36-157)||(29791082-29791203)
chr8 (36-159)||(2986465-2986588)
chr8 (36-157)||(2805476-2805597)
chr8 (36-157)||(6470985-6471106)
chr8 (36-157)||(45081952-45082073)
chr8 (36-158)||(13138131-13138253)
chr8 (36-158)||(14522520-14522641)
chr8 (36-157)||(18809416-18809537)
chr8 (36-146)||(39361265-39361375)
chr8 (36-157)||(31127805-31127926)
chr8 (36-157)||(1580768-1580886)
chr8 (45-140)||(45253895-45253990)
chr8 (36-146)||(6470625-6470735)
chr8 (45-157)||(12893677-12893789)
chr8 (40-126)||(886100-886186)
chr8 (45-140)||(44123819-44123914)
chr8 (36-126)||(10658117-10658207)
chr8 (36-121)||(14847349-14847434)
chr8 (38-135)||(23764471-23764568)
chr8 (36-126)||(20167608-20167698)
chr8 (36-114)||(25256473-25256551)
chr8 (36-126)||(42786038-42786128)
chr8 (36-157)||(3383549-3383669)
chr8 (39-132)||(35584117-35584210)
chr8 (36-77)||(11854665-11854706)
chr8 (36-85)||(26627974-26628023)
chr8 (39-99)||(20671314-20671374)
chr8 (39-102)||(7431262-7431325)
chr8 (38-85)||(9302425-9302472)
chr8 (36-71)||(23248917-23248952)
chr8 (45-110)||(7603354-7603419)
chr8 (39-96)||(29917871-29917928)
chr8 (45-157)||(44887664-44887776)
[»] chr4 (60 HSPs)
chr4 (36-158)||(5744082-5744204)
chr4 (36-159)||(46212348-46212471)
chr4 (36-157)||(4264274-4264395)
chr4 (36-157)||(7738819-7738940)
chr4 (36-157)||(3442344-3442465)
chr4 (36-157)||(47579426-47579547)
chr4 (36-159)||(3443385-3443508)
chr4 (36-159)||(20678586-20678709)
chr4 (36-159)||(28152131-28152254)
chr4 (36-157)||(5735411-5735532)
chr4 (36-157)||(26205704-26205825)
chr4 (36-164)||(1377172-1377299)
chr4 (36-146)||(49768585-49768695)
chr4 (36-157)||(3901139-3901260)
chr4 (36-157)||(18359973-18360094)
chr4 (36-157)||(36602834-36602955)
chr4 (36-157)||(45198340-45198461)
chr4 (36-157)||(46803772-46803893)
chr4 (45-157)||(4209508-4209620)
chr4 (36-152)||(5123162-5123278)
chr4 (36-157)||(6494728-6494851)
chr4 (38-157)||(39260132-39260251)
chr4 (36-154)||(19525717-19525835)
chr4 (36-146)||(28166414-28166524)
chr4 (36-157)||(25644499-25644620)
chr4 (36-158)||(19170538-19170660)
chr4 (36-157)||(37688033-37688154)
chr4 (36-157)||(39786357-39786478)
chr4 (56-157)||(55190566-55190667)
chr4 (38-157)||(6922940-6923059)
chr4 (38-157)||(19652256-19652375)
chr4 (36-159)||(21858917-21859040)
chr4 (36-159)||(21914780-21914903)
chr4 (36-163)||(23603641-23603768)
chr4 (36-152)||(19633854-19633970)
chr4 (39-140)||(50033163-50033264)
chr4 (36-128)||(23256075-23256167)
chr4 (38-126)||(51736985-51737073)
chr4 (45-140)||(50035685-50035780)
chr4 (36-137)||(19631448-19631550)
chr4 (36-157)||(40250717-40250838)
chr4 (36-126)||(39195521-39195611)
chr4 (36-158)||(47278276-47278398)
chr4 (56-123)||(19731200-19731267)
chr4 (36-135)||(39194052-39194151)
chr4 (36-87)||(50971599-50971650)
chr4 (45-140)||(55997260-55997355)
chr4 (98-142)||(42187015-42187059)
chr4 (45-100)||(26660559-26660614)
chr4 (36-74)||(42187062-42187100)
chr4 (48-142)||(53568503-53568596)
chr4 (36-140)||(10181128-10181231)
chr4 (45-144)||(37164029-37164128)
chr4 (45-159)||(31152659-31152773)
chr4 (56-126)||(35755214-35755284)
chr4 (45-99)||(46608271-46608325)
chr4 (45-158)||(8525367-8525480)
chr4 (91-152)||(35064171-35064232)
chr4 (94-126)||(9965437-9965469)
chr4 (36-100)||(14958139-14958203)
[»] chr2 (47 HSPs)
chr2 (36-158)||(27559715-27559837)
chr2 (36-157)||(34827052-34827173)
chr2 (36-158)||(44330524-44330646)
chr2 (36-159)||(42038663-42038786)
chr2 (36-155)||(44283281-44283400)
chr2 (36-157)||(7442891-7443012)
chr2 (36-157)||(18718379-18718500)
chr2 (36-157)||(4045233-4045354)
chr2 (36-157)||(9877083-9877204)
chr2 (36-157)||(23671516-23671637)
chr2 (36-157)||(40425249-40425370)
chr2 (36-158)||(20517558-20517680)
chr2 (36-157)||(3987232-3987353)
chr2 (36-157)||(14372217-14372338)
chr2 (36-157)||(14707535-14707655)
chr2 (36-157)||(39418020-39418141)
chr2 (36-157)||(41172757-41172878)
chr2 (36-151)||(36198957-36199072)
chr2 (36-146)||(30708868-30708978)
chr2 (45-158)||(32775902-32776015)
chr2 (36-157)||(41463517-41463638)
chr2 (36-151)||(40598269-40598384)
chr2 (36-126)||(4083347-4083437)
chr2 (36-157)||(43925074-43925195)
chr2 (36-157)||(24282960-24283081)
chr2 (36-157)||(38963659-38963780)
chr2 (36-157)||(13399105-13399226)
chr2 (36-152)||(1110432-1110548)
chr2 (36-156)||(38137533-38137652)
chr2 (36-158)||(42020202-42020325)
chr2 (36-126)||(16941842-16941932)
chr2 (36-126)||(17012507-17012597)
chr2 (45-126)||(332423-332504)
chr2 (36-151)||(4045990-4046104)
chr2 (36-114)||(43409425-43409503)
chr2 (36-157)||(27667958-27668079)
chr2 (63-162)||(30776201-30776294)
chr2 (36-126)||(7106418-7106508)
chr2 (36-128)||(37806811-37806903)
chr2 (36-135)||(2543858-2543957)
chr2 (45-99)||(15177427-15177481)
chr2 (45-159)||(38963793-38963907)
chr2 (45-126)||(5030315-5030396)
chr2 (36-77)||(42951480-42951521)
chr2 (123-159)||(20917727-20917763)
chr2 (41-85)||(25277880-25277924)
chr2 (55-135)||(42951543-42951622)
[»] chr6 (25 HSPs)
chr6 (36-157)||(8796189-8796310)
chr6 (36-157)||(31854958-31855079)
chr6 (36-158)||(22020416-22020538)
chr6 (36-158)||(25435551-25435673)
chr6 (36-159)||(18992043-18992166)
chr6 (36-158)||(20662058-20662180)
chr6 (36-157)||(643431-643552)
chr6 (36-157)||(11114705-11114826)
chr6 (36-157)||(16696016-16696137)
chr6 (36-157)||(24150881-24151002)
chr6 (36-165)||(30237307-30237436)
chr6 (36-157)||(7097873-7097994)
chr6 (36-157)||(25163304-25163425)
chr6 (36-157)||(13206953-13207074)
chr6 (36-163)||(33121682-33121809)
chr6 (39-157)||(19068771-19068889)
chr6 (36-105)||(29986210-29986279)
chr6 (36-110)||(19788625-19788699)
chr6 (117-157)||(29979024-29979064)
chr6 (45-159)||(9022838-9022952)
chr6 (52-110)||(12869377-12869435)
chr6 (36-110)||(19762318-19762392)
chr6 (45-159)||(24798502-24798616)
chr6 (45-157)||(2141568-2141680)
chr6 (45-157)||(32541433-32541545)
[»] chr5 (43 HSPs)
chr5 (36-157)||(32002014-32002135)
chr5 (36-157)||(32334638-32334759)
chr5 (36-157)||(39894921-39895042)
chr5 (36-161)||(4924834-4924959)
chr5 (36-157)||(5212922-5213043)
chr5 (36-157)||(29627408-29627529)
chr5 (36-157)||(42148447-42148568)
chr5 (36-159)||(39036550-39036673)
chr5 (36-158)||(40512679-40512801)
chr5 (36-157)||(22613709-22613830)
chr5 (36-157)||(23988717-23988838)
chr5 (36-157)||(35447997-35448118)
chr5 (51-159)||(5364579-5364687)
chr5 (36-159)||(35290426-35290549)
chr5 (36-158)||(37843574-37843696)
chr5 (36-157)||(4299833-4299954)
chr5 (36-157)||(14475230-14475351)
chr5 (36-157)||(16048225-16048346)
chr5 (36-157)||(39405904-39406025)
chr5 (36-152)||(37516285-37516401)
chr5 (36-159)||(38698103-38698226)
chr5 (36-158)||(43517059-43517181)
chr5 (36-157)||(970278-970399)
chr5 (36-157)||(41411157-41411278)
chr5 (36-157)||(1830795-1830916)
chr5 (36-163)||(2864094-2864221)
chr5 (38-143)||(25563642-25563747)
chr5 (55-157)||(43067380-43067482)
chr5 (36-140)||(40316262-40316366)
chr5 (45-126)||(19087647-19087728)
chr5 (36-119)||(19868724-19868807)
chr5 (36-128)||(30779775-30779867)
chr5 (36-157)||(16954763-16954881)
chr5 (45-158)||(13548212-13548325)
chr5 (36-77)||(19889793-19889834)
chr5 (45-158)||(20040367-20040480)
chr5 (45-158)||(30721637-30721750)
chr5 (36-71)||(5985025-5985060)
chr5 (45-99)||(31191129-31191183)
chr5 (36-126)||(35641800-35641890)
chr5 (45-157)||(1098175-1098287)
chr5 (36-112)||(21961367-21961443)
chr5 (39-99)||(28142986-28143046)
[»] chr1 (41 HSPs)
chr1 (36-157)||(38458870-38458991)
chr1 (36-157)||(32988349-32988470)
chr1 (36-157)||(25531918-25532039)
chr1 (36-157)||(50539400-50539521)
chr1 (36-159)||(30529048-30529171)
chr1 (36-158)||(49805251-49805373)
chr1 (36-158)||(50876504-50876626)
chr1 (36-157)||(1849840-1849962)
chr1 (36-157)||(37281232-37281353)
chr1 (36-157)||(42708640-42708761)
chr1 (36-159)||(29161983-29162106)
chr1 (36-157)||(4605139-4605260)
chr1 (36-157)||(16265173-16265294)
chr1 (36-157)||(16266302-16266423)
chr1 (36-157)||(39354264-39354385)
chr1 (36-157)||(48264811-48264932)
chr1 (36-157)||(52379129-52379250)
chr1 (36-155)||(48219644-48219763)
chr1 (36-157)||(3898571-3898692)
chr1 (36-157)||(23569674-23569795)
chr1 (36-157)||(24982491-24982612)
chr1 (36-157)||(43680210-43680331)
chr1 (45-157)||(26441783-26441895)
chr1 (55-157)||(45234849-45234951)
chr1 (47-140)||(16751470-16751563)
chr1 (36-157)||(41501607-41501728)
chr1 (45-140)||(47222364-47222459)
chr1 (36-126)||(3529316-3529406)
chr1 (38-140)||(14075876-14075977)
chr1 (36-126)||(21034560-21034650)
chr1 (36-157)||(50481416-50481537)
chr1 (36-126)||(48376288-48376375)
chr1 (36-126)||(31971418-31971508)
chr1 (36-120)||(23330592-23330677)
chr1 (45-161)||(45299314-45299430)
chr1 (38-115)||(27990757-27990834)
chr1 (36-77)||(32565886-32565927)
chr1 (39-126)||(50295886-50295973)
chr1 (45-151)||(32968119-32968225)
chr1 (43-157)||(41855675-41855789)
chr1 (56-120)||(38737869-38737933)
[»] scaffold0459 (1 HSPs)
scaffold0459 (36-146)||(12892-13002)
[»] scaffold0366 (2 HSPs)
scaffold0366 (36-146)||(10533-10643)
scaffold0366 (36-146)||(14199-14309)
[»] scaffold0051 (1 HSPs)
scaffold0051 (36-157)||(41217-41338)
[»] scaffold0007 (1 HSPs)
scaffold0007 (36-157)||(15216-15337)
[»] scaffold0092 (1 HSPs)
scaffold0092 (36-146)||(44119-44229)
[»] scaffold0027 (1 HSPs)
scaffold0027 (38-154)||(117463-117579)
[»] scaffold0604 (1 HSPs)
scaffold0604 (36-157)||(1254-1369)
[»] scaffold0340 (1 HSPs)
scaffold0340 (60-157)||(14502-14599)
[»] scaffold0111 (1 HSPs)
scaffold0111 (56-140)||(38249-38333)
[»] scaffold0687 (1 HSPs)
scaffold0687 (45-110)||(1036-1101)
[»] scaffold0281 (1 HSPs)
scaffold0281 (39-99)||(13162-13222)
[»] scaffold0221 (1 HSPs)
scaffold0221 (45-157)||(5376-5488)


Alignment Details
Target: chr7 (Bit Score: 106; Significance: 4e-53; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 4612208 - 4612087
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4612208 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcat 4612109  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  4612108 ttattaagggacggagggagta 4612087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 36 - 159
Target Start/End: Complemental strand, 31466479 - 31466356
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  31466479 tccaacaacatcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcat 31466380  T
Q  136 ttattaagggatggagggagtaat 159  Q
    ||||||||||| ||||||||||||    
T  31466379 ttattaagggacggagggagtaat 31466356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 19072909 - 19073030
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||| ||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||    
T  19072909 tccagcaacatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaaatcaataatgtatattgtcaactgggtcat 19073008  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  19073009 ttattaagggacggagggagta 19073030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 36905666 - 36905787
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||| |||||||||||||||| ||||||    
T  36905666 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatgtatattgtcaactgggtcat 36905765  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  36905766 ttatttagggacggagggagta 36905787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 47713623 - 47713502
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||||||||||||||||||||||||||||||| ||||||    
T  47713623 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcat 47713524  T
Q  136 ttattaagggatggagggagta 157  Q
    |||||||||||  |||||||||    
T  47713523 ttattaagggacagagggagta 47713502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 48531462 - 48531583
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||||||||||||||||||||||||||||||| ||||||    
T  48531462 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcat 48531561  T
Q  136 ttattaagggatggagggagta 157  Q
     |||||||||| ||||||||||    
T  48531562 ctattaagggacggagggagta 48531583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 36819836 - 36819959
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  36819836 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 36819935  T
Q  136 ttattaagggatggagggagtaat 159  Q
    ||||||||||| ||||||||||||    
T  36819936 ttattaagggacggagggagtaat 36819959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 47081120 - 47081241
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||||||||||||||||||||||||| |||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  47081120 tccaacaacatcttacatgatattatttatctttgtggattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 47081219  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  47081220 ttattaagggacggagggagta 47081241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 23474090 - 23473969
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||| ||||| ||  ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  23474090 tccaacaacatcttacatgatattatttatctttgtaaattagtaggaaagtatggtcaaagtatgtaaagtcaataatgtatattgtcaactaggtcat 23473991  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||| ||||||    
T  23473990 ttattaagggacggatggagta 23473969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 31110765 - 31110886
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||| |||||||||| |||||||||||||||| | ||||    
T  31110765 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatttcaagtcaattatgtatattgtcaactggatcat 31110864  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  31110865 ttatttagggacggagggagta 31110886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 37951066 - 37950945
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| || ||||| ||| |||||||||||||| |||||||||||| ||||||    
T  37951066 tccaacaacatcttacatgatattatttatctttgtgaattagtaaaaaagtatgatcaaaatatatcaagtcaataatgcatattgtcaactaggtcat 37950967  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  37950966 ttattaagggacggagggagta 37950945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 42834413 - 42834292
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||| ||||||||| |||||||| ||| ||||||    
T  42834413 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaaatcaataatgcatattgtcgactaggtcat 42834314  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  42834313 ttattaagggacggagggagta 42834292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 47538063 - 47538184
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| ||||||| |||||||||||| ||||||||||||||||||| ||||||    
T  47538063 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaggtatgtcaagtccataatgtatattgtcaactaggtcat 47538162  T
Q  136 ttattaagggatggagggagta 157  Q
     |||||||||  ||||||||||    
T  47538163 ctattaaggggcggagggagta 47538184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 28185523 - 28185410
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||||||||    
T  28185523 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactatgtcatttattaagg 28185424  T
Q  145 gatggagggagtaa 158  Q
    || |||| ||||||    
T  28185423 gacggagagagtaa 28185410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 36859329 - 36859208
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| |||| ||||||||| ||||||||||||  |||||    
T  36859329 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaaatcaataatgcatattgtcaactaagtcat 36859230  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  36859229 ttattaagggacggagggagta 36859208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 37231684 - 37231563
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| |||| |    
T  37231684 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcgt 37231585  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  37231584 ttattgagggacggagggagta 37231563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 44479842 - 44479750
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 128  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||    
T  44479842 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaact 44479750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 32619063 - 32618941
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| || ||||||||| | |||||||||||| |||||||||| | ||||||    
T  32619063 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatataaagtcaataatgcatattgtcaattaggtcat 32618964  T
Q  136 ttattaagggatggagggagtaa 158  Q
    ||||||||||| ||| |||||||    
T  32618963 ttattaagggacggaaggagtaa 32618941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 2400425 - 2400546
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| | |||||||||||| ||||||||||||   ||||    
T  2400425 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatataaagtcaataatgcatattgtcaactatatcat 2400524  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||| ||||    
T  2400525 ttattaagggacggaggaagta 2400546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 10464236 - 10464115
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||| |||||||||||||||||| ||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||    
T  10464236 tccaacaacatcttatatgatattatttatctttatgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcat 10464137  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  10464136 ttattgagggacggagggagta 10464115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 42086759 - 42086638
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||| ||| |||||||||||||  ||||||||||||   ||||    
T  42086759 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatatcaagtcaataatacatattgtcaactaaatcat 42086660  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  42086659 ttattaagggacggagggagta 42086638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 21392161 - 21392265
Alignment:
Q  39 aacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcattta 138  Q
    ||||| ||||||||||||||||||||||||||||||||| || |||| | ||||||||||||||||||| |||||||||||||||||||| ||| |||||    
T  21392161 aacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagttaataatgtatattgtcaactaggttattta 21392260  T
Q  139 ttaag 143  Q
    |||||    
T  21392261 ttaag 21392265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 38 - 159
Target Start/End: Complemental strand, 34478130 - 34478006
Alignment:
Q  38 caacaatatcttacatgata---ttatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtca 134  Q
    |||||| |||||||||||||   |||||||||||||||||||| || |||| | |||||||||||||| || |||||||||||||||||||||| |||||    
T  34478130 caacaacatcttacatgatagtattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaataatgtatattgtcaactaggtca 34478031  T
Q  135 tttattaagggatggagggagtaat 159  Q
    |||||| ||||| ||||||||||||    
T  34478030 tttattgagggacggagggagtaat 34478006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 35500868 - 35500747
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||| ||||||| || |||| | | |||||||||| | ||||||||||||||||||||||||| |||||     
T  35500868 tccaacaacatcttacatgatattatttatctttatgaattagtagaaaaatatagtcaaagtatcttaagtcaataatgtatattgtcaactaggtcaa 35500769  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  35500768 ttattgagggacggagggagta 35500747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 18795261 - 18795171
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||||| ||||||||||| |||||||||||    
T  18795261 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaataatatatattgtcaa 18795171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 46657773 - 46657863
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||||| ||||||||||||||||||||||||||| |||||||| |||| | ||||||||| |||| ||||||||||||||| |||||||    
T  46657773 tccaacaacatcttacatgatattatttatctttgtaaattaatagaaaaatatggtcaaagaatgttaagtcaataatgtatgttgtcaa 46657863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 36643302 - 36643394
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 128  Q
    |||||||| |||||| |||||||||||||||||||||||||| |  |||| | |||||||||||| | || ||||||||||||||||||||||    
T  36643302 tccaacaacatcttatatgatattatttatctttgtgaattagtggaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaact 36643394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 35725542 - 35725481
Alignment:
Q  161 tttatggaaaatggaaaatgacataaattttaatgactaggggattagtgtgatgattttag 222  Q
    ||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||    
T  35725542 tttatggaaaatggaaagtgacataaattttaatgactaggggactaatgtgatgattttag 35725481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 44389407 - 44389317
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||||| ||||||||||||||||||||| ||||||||||| || |||| | |  ||||| ||||| ||||||||| |||||||||||||    
T  44389407 tccaacaacatcttacatgatattatttatttttgtgaattagtagaaaaatattatcaaaatatgttaagtcaatagtgtatattgtcaa 44389317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 33613362 - 33613442
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||||||||||||||| ||||||||||| || |||| | |||||||| ||| | ||||||||||||||||| |||||    
T  33613362 atcttacatgatattatttatttttgtgaattagtaaaaaaatatggtcaaa-tatattaagtcaataatgtatatggtcaa 33613442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 31497825 - 31497740
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||||| ||||||||||||||     |||||||||||||| || |||| | |||||||| ||| | |||||||||||||||||||||||    
T  31497825 tccaacaacatcttacatgatat-----atctttgtgaattagtagaaaaatatggtcaaattatattaagtcaataatgtatattgtcaa 31497740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 24151640 - 24151581
Alignment:
Q  98 tatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggagggagta 157  Q
    ||||| ||||||||||||||||||||||| | |||||  |||||||||| ||||||||||    
T  24151640 tatgttaagtcaataatgtatattgtcaaataggtcacctattaagggacggagggagta 24151581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 3680460 - 3680390
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatg 115  Q
    |||||| |||||||||||||| |||||  |||| ||||||| |  ||||||| ||||||||||||||||||    
T  3680460 atcttatatgatattatttatatttgtatattagtataaaaataaggtcaaaatatgtcaagtcaataatg 3680390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 29770595 - 29770554
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaatta 77  Q
    |||||||| ||||| |||||||||||||||||||||||||||    
T  29770595 tccaacaacatcttccatgatattatttatctttgtgaatta 29770554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 157
Target Start/End: Complemental strand, 42493626 - 42493517
Alignment:
Q  48 ttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggat 147  Q
    ||||||||||||||||||||||||  |||| || |||| | |||||||||||||| | ||||||   | | |||||||| | |||||| ||||  ||||     
T  42493626 ttacatgatattatttatctttgtatattagtagaaaaatatggtcaaagtatgttaggtcaatcgcgcacattgtcaaataggtcatctattgtgggac 42493527  T
Q  148 ggagggagta 157  Q
    ||||||||||    
T  42493526 ggagggagta 42493517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 2450825 - 2450913
Alignment:
Q  36 tccaacaatatcttacatgatattattt-atctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgt 123  Q
    |||||||| ||||||||| ||||| ||| ||||||||||||||||| |||| | |||| ||| ||||| || | ||||| |||||||||    
T  2450825 tccaacaacatcttacataatatttttttatctttgtgaattaatagaaaaatatggttaaaatatgttaaattaataaagtatattgt 2450913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 16807098 - 16807210
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||| ||    
T  16807098 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgg 16807197  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  16807198 gacggagggagta 16807210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 30462173 - 30462238
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaa 110  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || |||||||    
T  30462173 atcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaagtaagttaagtcaa 30462238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 40348556 - 40348621
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaa 110  Q
    |||||| ||||||||||||||||||||  |||| || |||| | |||||||| ||||||| |||||    
T  40348556 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaatatgtcaggtcaa 40348621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 42086864 - 42086905
Alignment:
Q  122 gtcaacttggtcatttattaagggatggagggagtaatgttt 163  Q
    ||||||| ||||||||||| |||||||||||||||| |||||    
T  42086864 gtcaactaggtcatttatttagggatggagggagtactgttt 42086905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 28016233 - 28016173
Alignment:
Q  39 aacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagta 99  Q
    ||||| |||||| ||||||||||||||||||||  |||| || |||| | |||||||||||    
T  28016233 aacaacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 28016173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 165
Target Start/End: Complemental strand, 38069163 - 38069043
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||  ||    
T  38069163 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 38069064  T
Q  145 gatggagggagtaatgtttat 165  Q
     | ||||||||||||| ||||    
T  38069063 aacggagggagtaatgcttat 38069043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 4e-53; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 54840249 - 54840128
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  54840249 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcat 54840150  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  54840149 ttattaagggacggagggagta 54840128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 21907136 - 21907257
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||    
T  21907136 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgagtcat 21907235  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  21907236 ttattaagggacggagggagta 21907257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 38833803 - 38833924
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||| ||||||||||||||||||||||||||||||| ||||||    
T  38833803 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgtcaactgggtcat 38833902  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  38833903 ttattaagggacggagggagta 38833924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 45167439 - 45167560
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||    
T  45167439 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaaatatgtcaagtcaataatgtatattgtcaactggatcat 45167538  T
Q  136 ttattaagggatggagggagta 157  Q
     |||||||||| ||||||||||    
T  45167539 atattaagggacggagggagta 45167560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 7459941 - 7459820
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  7459941 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 7459842  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  7459841 ttattaagggacggagggagta 7459820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 8559126 - 8559002
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || ||| || |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  8559126 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaatgtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 8559027  T
Q  136 ttattaagggatggagggagtaatg 160  Q
    ||||||||||| |||||||||||||    
T  8559026 ttattaagggacggagggagtaatg 8559002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 51062530 - 51062653
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | ||||||||||||||||||||||||||||||||| ||||||  |||||    
T  51062530 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattatcaactgagtcat 51062629  T
Q  136 ttattaagggatggagggagtaat 159  Q
    ||||||||||| ||||||||||||    
T  51062630 ttattaagggacggagggagtaat 51062653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 10571265 - 10571144
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||| ||||||||||||||||||| ||||| ||||||| | |||||||||||||||||||||||||||||||||||||||| ||| ||    
T  10571265 tccaacaacatcttacttgatattatttatctttgtaaattagtataaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggttat 10571166  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  10571165 ttattaagggacggagggagta 10571144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 18659192 - 18659313
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||| ||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  18659192 tccaacaacatcttacatgatattatttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 18659291  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  18659292 ttattaagggacggagggagta 18659313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 29728219 - 29728098
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||| ||| ||||||||||||||||||||||||||| | ||||    
T  29728219 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatctcaagtcaataatgtatattgtcaactagatcat 29728120  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  29728119 ttattaagggacggagggagta 29728098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 52668605 - 52668486
Alignment:
Q  38 caacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcattt 137  Q
    |||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||| ||||    
T  52668605 caacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtgattt 52668506  T
Q  138 attaagggatggagggagta 157  Q
    ||||||||| ||||||||||    
T  52668505 attaagggacggagggagta 52668486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 37833040 - 37833161
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| |||||||||||||| ||||||| |||| ||||||    
T  37833040 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgttaactaggtcat 37833139  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  37833140 ttattaagggacggagggagta 37833161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 165
Target Start/End: Complemental strand, 48706958 - 48706838
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| || ||||| ||||||||||||||||| ||||||||||||| | |||||||||||||    
T  48706958 atcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaaatatgtcaagtcaataatatatattgtcaactggatcatttattaagg 48706859  T
Q  145 gatggagggagtaatgtttat 165  Q
    || |||||||||| |||||||    
T  48706858 gacggagggagtattgtttat 48706838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 1327452 - 1327562
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||| ||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  1327452 tccaacaacatcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 1327551  T
Q  136 ttattaaggga 146  Q
    |||||||||||    
T  1327552 ttattaaggga 1327562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 32285297 - 32285176
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| || ||||||||||||||||||||||||||||||||||||| || |||    
T  32285297 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatgtatattgtcaactaggccat 32285198  T
Q  136 ttattaagggatggagggagta 157  Q
     |||||||| | ||| ||||||    
T  32285197 ctattaaggaacggatggagta 32285176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 36 - 143
Target Start/End: Original strand, 43137991 - 43138098
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| ||||||||||||  |||||    
T  43137991 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcat 43138090  T
Q  136 ttattaag 143  Q
    ||||||||    
T  43138091 ttattaag 43138098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 17053004 - 17053125
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | || |||||||||||||||||||||| ||||||    
T  17053004 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaactgggtcat 17053103  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| |||| |||||    
T  17053104 ttattgagggacggagagagta 17053125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 32951257 - 32951136
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||| |||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| | ||||    
T  32951257 tccaacaacatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactagatcat 32951158  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  32951157 ttattgagggacggagggagta 32951136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 38492191 - 38492301
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| || |||||||||||||||||||||||| ||||| || |||| | |||||||||||||| || |||||||||||||||||||||| ||||||    
T  38492191 tccaacaacattttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaagtatgttaaatcaataatgtatattgtcaactaggtcat 38492290  T
Q  136 ttattaaggga 146  Q
    |||||||||||    
T  38492291 ttattaaggga 38492301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 154
Target Start/End: Original strand, 47638211 - 47638313
Alignment:
Q  52 atgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggag 151  Q
    |||||||||||||||||||||||||| || |||||| ||||||||||||||||| |||||||||||||||||||| | |||||| |||||||||| ||||    
T  47638211 atgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgtcaattaggtcatctattaagggacggag 47638310  T
Q  152 gga 154  Q
    |||    
T  47638311 gga 47638313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 36665158 - 36665275
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    ||||||||||||||||||| |||||||||||||||||||||| || |||| | | |||||||||||| |||| |||||||||||||||||| | ||||||    
T  36665158 tccaacaatatcttacatggtattatttatctttgtgaattagtagaaaaatatagtcaaagtatgttaagttaataatgtatattgtcaaataggtcat 36665257  T
Q  136 ttattaagggatggaggg 153  Q
     |||||||||| ||||||    
T  36665258 ctattaagggacggaggg 36665275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 53066529 - 53066633
Alignment:
Q  55 atattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggaggga 154  Q
    ||||||||||||||||||||||| || |||||| || ||||||||||||||||||||||| ||||||||||||| | |||| |||||||||| |||||||    
T  53066529 atattatttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatatatattgtcaactagatcatctattaagggacggaggga 53066628  T
Q  155 gtaat 159  Q
    |||||    
T  53066629 gtaat 53066633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 34827419 - 34827514
Alignment:
Q  62 ttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggagggagta 157  Q
    |||||||||| ||||| ||||||||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  34827419 ttatctttgtaaattagtataaaagtatggtgaaagtatgtcaagtcaataatatatattgtcaactaggtcatttattaagggacggagggagta 34827514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 25097304 - 25097198
Alignment:
Q  40 acaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttat 139  Q
    |||| ||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||  |||||||||||||| |  ||||| |||    
T  25097304 acaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaaatatgtatattgtcaattaagtcatctat 25097205  T
Q  140 taaggga 146  Q
    |||||||    
T  25097204 taaggga 25097198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 46483690 - 46483809
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||| ||||||||||||||||||||||| || |||||| |||||  |||||||||| |||||||||||||||||||||| | ||||    
T  46483690 tccaacaaaatcttacataatattatttatctttgtgaattagtagaaaagtatggtc--agtatgtcaaatcaataatgtatattgtcaactagatcat 46483787  T
Q  136 ttattaagggatggagggagta 157  Q
     ||||||||||  |||||||||    
T  46483788 ctattaagggacagagggagta 46483809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 159
Target Start/End: Original strand, 49057999 - 49058119
Alignment:
Q  39 aacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcattta 138  Q
    ||||| ||||||||||||||||||||||||||||||||| || |||| | || |||||||| |||||||||||||| |||||||||||   |||||| ||    
T  49057999 aacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatgatcaaagtacgtcaagtcaataatatatattgtcaaagaggtcatcta 49058098  T
Q  139 ttaagggatggagggagtaat 159  Q
    || ||||| ||||||||||||    
T  49058099 tttagggacggagggagtaat 49058119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 35717976 - 35717886
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||||| ||||||||| ||||||||||||||||||||||| || |||| | |||||||| ||||| |||||||||||||||||||||||    
T  35717976 tccaacaacatcttacataatattatttatctttgtgaattagtagaaaaatatggtcaaaatatgttaagtcaataatgtatattgtcaa 35717886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 3547542 - 3547420
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaag-tgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtca 134  Q
    |||||||| ||||||||| |||||||||||| ||||||| || || ||||  | |||||||||||||| ||||||||||||||||||||||| | |||||    
T  3547542 tccaacaacatcttacattatattatttatcattgtgaaatagtaaaaaaaatatggtcaaagtatgttaagtcaataatgtatattgtcaaataggtca 3547443  T
Q  135 tttattaagggatggagggagta 157  Q
    | |||| ||||| | ||||||||    
T  3547442 tctattgagggacgaagggagta 3547420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 56 - 157
Target Start/End: Complemental strand, 4238595 - 4238494
Alignment:
Q  56 tattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggagggag 155  Q
    |||||||||||||||||||||| |  |||| | |||||||||||| | |||| ||||||||||||||||||||  |||||||||| ||||| ||||||||    
T  4238595 tattatttatctttgtgaattagtggaaaaatatggtcaaagtatattaagttaataatgtatattgtcaactaagtcatttattgagggacggagggag 4238496  T
Q  156 ta 157  Q
    ||    
T  4238495 ta 4238494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 54673918 - 54674039
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||| |||||||||||||||||||| ||||| || |||| | || |||||||| ||||| |||||||| |||||||||||   | ||||    
T  54673918 tccaacaacatcttatatgatattatttatctttgttaattagtagaaaaatatgatcaaagtacgtcaaatcaataatatatattgtcaaacagatcat 54674017  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  54674018 ttatttagggacggagggagta 54674039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 48143905 - 48144013
Alignment:
Q  38 caacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcattt 137  Q
    |||||| ||||||||||||||||||||||||||| ||||| || |||| | |||||||| ||| | | ||||||||| ||||||||||| | ||||||||    
T  48143905 caacaacatcttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaaatatattatgtcaataatatatattgtcaaataggtcattt 48144004  T
Q  138 attaaggga 146  Q
    ||| |||||    
T  48144005 attgaggga 48144013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 7671434 - 7671313
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||| |||||| |||| | | ||||||  |||| ||||||||| ||| | ||||||| | ||||||    
T  7671434 tccaacaacatcttacatgatattatttatctttgtgagttaatagaaaaatattgtcaaaacatgttaagtcaatattgttttttgtcaaataggtcat 7671335  T
Q  136 ttattaagggatggagggagta 157  Q
     | ||||| || | ||||||||    
T  7671334 ctcttaagagacgaagggagta 7671313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 27849091 - 27849150
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaa 95  Q
    |||||||| ||||||||||||||||||||||||||| |||||||| |||||| |||||||    
T  27849091 tccaacaacatcttacatgatattatttatctttgttaattaatagaaaagtatggtcaa 27849150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 10435329 - 10435380
Alignment:
Q  106 gtcaataatgtatattgtcaacttggtcatttattaagggatggagggagta 157  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||    
T  10435329 gtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 10435380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 27849146 - 27849199
Alignment:
Q  106 gtcaataatgtatattgtcaacttggtcatttattaagggatggagggagtaat 159  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||| ||||||||    
T  27849146 gtcaataatgtatattgtcaactaggtcatctattaagggacggaaggagtaat 27849199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 3086281 - 3086345
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtat 100  Q
    ||||||||||||||| ||||||||||||||||||||  |||| || |||| | ||||||||||||    
T  3086281 tccaacaatatcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaagtat 3086345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 15503163 - 15503255
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 128  Q
    |||||||| ||||||||| ||||||||| ||||| | ||||| || |||| |  | ||||||||| | |||||||||||||||||| ||||||    
T  15503163 tccaacaacatcttacataatattatttttctttttaaattagtagaaaaataagatcaaagtatattaagtcaataatgtatattatcaact 15503255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 10435274 - 10435333
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaa 95  Q
    |||||||| ||||||||| ||||||||||||||||||||||| || |||| | |||||||    
T  10435274 tccaacaacatcttacataatattatttatctttgtgaattagtagaaaaatatggtcaa 10435333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 5030111 - 5030031
Alignment:
Q  36 tccaacaatatcttacatgata-ttatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatg 115  Q
    |||||||| |||||| |||||| ||||||||||||||  |||| || ||||||  ||||||||||| | ||||||||||||    
T  5030111 tccaacaacatcttatatgataattatttatctttgtatattagtagaaaagtacggtcaaagtatattaagtcaataatg 5030031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 48690193 - 48690269
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaata 112  Q
    |||||||| |||||| ||||||||||||||||||||  |||| || |||| | | || ||| |||||||||||||||    
T  48690193 tccaacaacatcttatatgatattatttatctttgtatattagtagaaaaatattgttaaaatatgtcaagtcaata 48690269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 9484708 - 9484594
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||  ||    
T  9484708 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 9484609  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  9484608 gacggagggagtaat 9484594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 29793325 - 29793439
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||  ||    
T  29793325 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 29793424  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  29793425 gacggagggagtaat 29793439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 34555263 - 34555149
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| |||| | ||| ||||   ||||| |||||  ||    
T  34555263 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaaatgcacattttcaaacaggtcacttattgcgg 34555164  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  34555163 gacggagggagtaat 34555149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 39099081 - 39098992
Alignment:
Q  39 aacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 128  Q
    ||||| |||| | ||||||||||||||||||||  ||||||| |||| | | |||||||| | |||| ||||||||| | ||| ||||||    
T  39099081 aacaacatctaatatgatattatttatctttgtatattaatagaaaaatatagtcaaagtttatcaattcaataatggacattttcaact 39098992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 42098574 - 42098687
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||  ||    
T  42098574 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 42098673  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  42098674 gacggagggagtaa 42098687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 45093861 - 45093935
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaata 112  Q
    ||||| |||||||||||||  |||||||||| |||||||||| || |||| | || ||||| ||||| |||||||||    
T  45093861 tccaataatatcttacatg--attatttatcgttgtgaattagtagaaaaatatgatcaaaatatgttaagtcaata 45093935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 50673789 - 50673724
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaa 110  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || |||||||    
T  50673789 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaagtcaa 50673724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 29455655 - 29455767
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   ||||||||||||  |    
T  29455655 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacag 29455754  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  29455755 gacggagggagta 29455767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 49076373 - 49076485
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||  ||    
T  49076373 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 49076472  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  49076473 gacggagggagta 49076485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 3e-51; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 3293222 - 3293100
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  3293222 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcat 3293123  T
Q  136 ttattaagggatggagggagtaa 158  Q
    ||||||||||| |||||||||||    
T  3293122 ttattaagggacggagggagtaa 3293100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 37710039 - 37710160
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  37710039 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgagtcat 37710138  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||| ||||||    
T  37710139 ttattaagggacggatggagta 37710160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 38845747 - 38845866
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  38845747 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaaatgtggtcaaagtatgtcaagtcaacaatgtatattgtcaactgggtcat 38845846  T
Q  136 ttattaagggatggagggag 155  Q
    ||||||||||| ||||||||    
T  38845847 ttattaagggacggagggag 38845866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 8351001 - 8350880
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||| | |||||||| |||| | |||||||||||||||||||||||||||||||||||||||| ||||||    
T  8351001 tccaacaacatcttacatgatattatttatctttctaaattaatagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcat 8350902  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||||||||||||||    
T  8350901 ttattaagggatggagggagta 8350880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 30380670 - 30380791
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||| | ||||    
T  30380670 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactggatcat 30380769  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  30380770 ttattaagggacggagggagta 30380791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 23248992 - 23249115
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  23248992 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 23249091  T
Q  136 ttattaagggatggagggagtaat 159  Q
    ||||||||||| ||||||||||||    
T  23249092 ttattaagggacggagggagtaat 23249115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 30290064 - 30290185
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  30290064 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 30290163  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  30290164 ttattaagggacggagggagta 30290185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 38739797 - 38739918
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  38739797 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaaatcaataatatatattgtcaactgggtcat 38739896  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||  ||| ||||||||||    
T  38739897 ttattaccggacggagggagta 38739918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 43066266 - 43066387
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  43066266 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgtatattgtcgactaggtcat 43066365  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  43066366 ttattaagggacggagggagta 43066387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 40013793 - 40013909
Alignment:
Q  38 caacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcattt 137  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  40013793 caacaacatcttacatgatattatttatatttgtgaattaatataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgagtcattt 40013892  T
Q  138 attaagggatggaggga 154  Q
    | ||||||| |||||||    
T  40013893 actaagggacggaggga 40013909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 29791082 - 29791203
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  29791082 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 29791181  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| | ||||||||    
T  29791182 ttattaagggacgtagggagta 29791203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 2986465 - 2986588
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||||||||||||||| |||||||| ||||| || |||||| |||||||| |||||||||||||||||||||||||||||||  |||||    
T  2986465 tccaacaacatcttacatgatattattaatctttgtaaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgtcaactaagtcat 2986564  T
Q  136 ttattaagggatggagggagtaat 159  Q
    ||||||||||| ||||||||||||    
T  2986565 ttattaagggacggagggagtaat 2986588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 2805597 - 2805476
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||| ||||||||||||| || |||||| |||||||||||| |||||||||| ||| |||||||||||| ||||||    
T  2805597 tccaacaacatcttacatgatattatttttctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaatgatgcatattgtcaactaggtcat 2805498  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  2805497 ttattaagggacggagggagta 2805476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 6470985 - 6471106
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||| ||||||| || |||||| || ||||||||||||||||||||||||||||||||||||| ||||||    
T  6470985 tccaacaacatcttacatgatattatttatctttatgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatgtatattgtcaactaggtcat 6471084  T
Q  136 ttattaagggatggagggagta 157  Q
     ||||||||||  |||||||||    
T  6471085 ctattaagggacagagggagta 6471106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 45081952 - 45082073
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| ||||| |||||| |||| ||||||||| |||||||||||| ||||||    
T  45081952 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcgaagtatatcaaatcaataatgcatattgtcaactaggtcat 45082051  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  45082052 ttattaagggacggagggagta 45082073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 13138253 - 13138131
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||| |||||||||||||||||||||||| |||||| ||||||    
T  13138253 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaaatatgtcaagtcaataatgtatattatcaactaggtcat 13138154  T
Q  136 ttattaagggatggagggagtaa 158  Q
     |||||| ||| |||||||||||    
T  13138153 ctattaaaggacggagggagtaa 13138131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 14522520 - 14522641
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||| ||||||||||| ||||| || |||||| |||||||||||| ||||||||||||||||||||||||||| ||||||    
T  14522520 tccaacaacatcttacatgatattttttatctttgt-aattagtagaaaagtatggtcaaagtatatcaagtcaataatgtatattgtcaactaggtcat 14522618  T
Q  136 ttattaagggatggagggagtaa 158  Q
     |||||||||| |||||||||||    
T  14522619 ctattaagggacggagggagtaa 14522641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 18809416 - 18809537
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||| |||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||    
T  18809416 tccaacaacatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcat 18809515  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  18809516 ttattgagggacggagggagta 18809537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 39361265 - 39361375
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||| ||||||||||||||||||||||||||||| |||||| || ||||||||| |||| ||||||||| |||||||||||| ||||||    
T  39361265 tccaacaacatcttatatgatattatttatctttgtgaattaatagaaaagtatgatcaaagtatatcaaatcaataatgcatattgtcaactaggtcat 39361364  T
Q  136 ttattaaggga 146  Q
    |||||||||||    
T  39361365 ttattaaggga 39361375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 31127926 - 31127805
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | || ||||||||| | ||||||||||| ||||||||||||| ||||||    
T  31127926 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatgatcaaagtatattaagtcaataatatatattgtcaactaggtcat 31127827  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  31127826 ttattgagggacggagggagta 31127805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 1580886 - 1580768
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||| ||||| || |||||| ||||||||||||||||| |||||||||||||||||   || ||||||    
T  1580886 tccaacaacatcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaactcaataatgtatattgt---ctaggtcat 1580790  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||| | ||||||||||    
T  1580789 ttattaaggaacggagggagta 1580768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 45253895 - 45253990
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatt 140  Q
    ||||||||||||||||||| ||||||||||||| || |||| | |||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  45253895 atcttacatgatattatttttctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctatt 45253990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 36 - 146
Target Start/End: Complemental strand, 6470735 - 6470625
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||| ||||||| || |||||| | |||||| ||| |||| |||||||||||||||||||||| ||||||    
T  6470735 tccaacaacatcttacatgatattatttatctttatgaattagtagaaaagtatcgtcaaaatatctcaaatcaataatgtatattgtcaactaggtcat 6470636  T
Q  136 ttattaaggga 146  Q
     ||||||||||    
T  6470635 ctattaaggga 6470625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 12893677 - 12893789
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||| |||| ||| |||| | |||||||||||||| |||||||||||| |||||||||| | ||||||||| | |||    
T  12893677 atcttacatgatattatttatctttgtaaattgatagaaaaatatggtcaaagtatgttaagtcaataatgcatattgtcaaataggtcatttactgagg 12893776  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  12893777 gacggagggagta 12893789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 886186 - 886100
Alignment:
Q  40 acaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||||| |||| ||||||||||||||||||    
T  886186 acaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagttaataatgtatattgtcaa 886100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 44123819 - 44123914
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatt 140  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||| ||||||||| ||||||| ||||||||||||||| | |||||| ||||    
T  44123819 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaacaatgtatattgtcaaataggtcatctatt 44123914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 10658117 - 10658207
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||||| ||||||||| ||||||||||| ||||| ||||| || |||| | |||||||||||||| |||||||||||||||||||||||    
T  10658117 tccaacaacatcttacataatattatttatatttgttaattagtagaaaaatatggtcaaagtatgttaagtcaataatgtatattgtcaa 10658207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 14847349 - 14847434
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatatt 121  Q
    ||||||||||||||| || ||||||||||||||||||||||| || |||| | |||||||||||||| |||| |||||||||||||    
T  14847349 tccaacaatatcttaaataatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtaaagttaataatgtatatt 14847434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 23764568 - 23764471
Alignment:
Q  38 caacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||| ||||||||||||||||||| |||||||||||||||| |||| | || ||||| ||| |||| | |||||||||||||||||||| ||||||    
T  23764568 caacaacatcttacatgatattatttttctttgtgaattaatagaaaaatatgatcaaaatatatcaaattaataatgtatattgtcaactaggtcat 23764471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 20167698 - 20167608
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||||| ||||||||||||||||||||| ||||||||||| || |||| | |  ||||| ||||| ||||||||| |||||||||||||    
T  20167698 tccaacaacatcttacatgatattatttatttttgtgaattagtagaaaaatattatcaaaatatgttaagtcaatagtgtatattgtcaa 20167608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 25256473 - 25256551
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataat 114  Q
    |||||||| ||||||||||||||||||||||||||| ||||| || |||| | || ||||||||||| |||||||||||    
T  25256473 tccaacaacatcttacatgatattatttatctttgtaaattagtagaaaaatatgatcaaagtatgttaagtcaataat 25256551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 42786038 - 42786128
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||||| |||||| ||||||||||||||||||||  ||||||| |||| | |||||||| | ||||||||||| | |||| ||||||||    
T  42786038 tccaacaacatcttatatgatattatttatctttgtatattaatagaaaaatatggtcaaaatgtgtcaagtcaaaactgtaaattgtcaa 42786128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 3383549 - 3383669
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||| ||||||||||||||||||||||||||| |  |||| | || ||| ||||| | ||||||||||| ||||||||||| |   ||||    
T  3383549 tccaacaacatctt-catgatattatttatctttgtgaattagtgaaaaaatatgatcacagtatattaagtcaataatatatattgtcaaatatatcat 3383647  T
Q  136 ttattaagggatggagggagta 157  Q
     |||||||||| ||| ||||||    
T  3383648 ctattaagggacggaaggagta 3383669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 35584117 - 35584210
Alignment:
Q  39 aacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggt 132  Q
    |||||||||||| ||||||||||||||||||||  ||||||| |||| | || ||||| ||| | | |||||||||| | |||||||| |||||    
T  35584117 aacaatatcttatatgatattatttatctttgtatattaatagaaaaatatgatcaaaatatattaggtcaataatgcacattgtcaaattggt 35584210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 11854665 - 11854706
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaatta 77  Q
    |||||||| |||||||| ||||||||||||||||||||||||    
T  11854665 tccaacaacatcttacaggatattatttatctttgtgaatta 11854706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 26628023 - 26627974
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaa 85  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||| ||||    
T  26628023 tccaacaatatcttatatgatattatttatctttgtatattaatagaaaa 26627974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 20671374 - 20671314
Alignment:
Q  39 aacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagta 99  Q
    |||||||||||| ||||||||||||||||||||  |||| || |||| | |||||||||||    
T  20671374 aacaatatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 20671314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 7431262 - 7431325
Alignment:
Q  39 aacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgt 102  Q
    ||||| |||||| ||||||||||||||||||||  |||| || |||| |||||||||| |||||    
T  7431262 aacaacatcttatatgatattatttatctttgtatattagtagaaaaatgtggtcaaaatatgt 7431325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 9302472 - 9302425
Alignment:
Q  38 caacaatatcttacatgatattatttatctttgtgaattaatataaaa 85  Q
    |||||| ||||||||| ||||||||||||||||| |||||||| ||||    
T  9302472 caacaacatcttacataatattatttatctttgtaaattaatagaaaa 9302425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 23248917 - 23248952
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgt 71  Q
    |||||||| |||||||||||||||||||||||||||    
T  23248917 tccaacaacatcttacatgatattatttatctttgt 23248952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 7603419 - 7603354
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaa 110  Q
    |||||| ||||||||||||||||||||  |||| ||||||| |  ||||||| ||||||| |||||    
T  7603419 atcttatatgatattatttatctttgtatattagtataaaaatacggtcaaaatatgtcaggtcaa 7603354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 29917871 - 29917928
Alignment:
Q  39 aacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaa 96  Q
    |||||||||||| ||||||||||||||||||||  |||| || |||| | ||||||||    
T  29917871 aacaatatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaa 29917928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 44887664 - 44887776
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | |||||||| || |||| ||||| | || | ||| |||| | | |||||||||  ||    
T  44887664 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaactaagtcaggtcaaaattgcacattttcaaatagatcatttattgcgg 44887763  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  44887764 gacggagggagta 44887776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 3e-51; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 5744204 - 5744082
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  5744204 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaaaaatgtatattgtcaactgggtcat 5744105  T
Q  136 ttattaagggatggagggagtaa 158  Q
    ||||||||||| |||||||||||    
T  5744104 ttattaagggacggagggagtaa 5744082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 36 - 159
Target Start/End: Complemental strand, 46212471 - 46212348
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||    
T  46212471 tccaacaacatcttacatgatattatttatctttatgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgagtcat 46212372  T
Q  136 ttattaagggatggagggagtaat 159  Q
    ||||||||||||||||||||||||    
T  46212371 ttattaagggatggagggagtaat 46212348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 4264274 - 4264395
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||    
T  4264274 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaagtcat 4264373  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  4264374 ttattaagggacggagggagta 4264395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 7738940 - 7738819
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  7738940 tccaacaacatcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcat 7738841  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  7738840 ttattaagggacggagggagta 7738819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 3442465 - 3442344
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  3442465 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 3442366  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  3442365 ttattaagggacggagggagta 3442344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 47579426 - 47579547
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  47579426 tccaacaacatcttacatgatattatttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 47579525  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  47579526 ttattaagggacggagggagta 47579547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 36 - 159
Target Start/End: Complemental strand, 3443508 - 3443385
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||||||||||||| |||||||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  3443508 tccaacaacatcttacatgatattacttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcat 3443409  T
Q  136 ttattaagggatggagggagtaat 159  Q
    ||||||||||| |||| |||||||    
T  3443408 ttattaagggagggagagagtaat 3443385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 36 - 159
Target Start/End: Complemental strand, 20678709 - 20678586
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  20678709 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 20678610  T
Q  136 ttattaagggatggagggagtaat 159  Q
    ||||||||||| ||||| ||||||    
T  20678609 ttattaagggacggaggaagtaat 20678586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 28152131 - 28152254
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| || ||||||||| |||||||||||||| |||||||||||| ||||||    
T  28152131 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 28152230  T
Q  136 ttattaagggatggagggagtaat 159  Q
    ||||||||||| ||||||||||||    
T  28152231 ttattaagggacggagggagtaat 28152254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 5735411 - 5735532
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||| ||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  5735411 tccaacaacatcttacatgatattatttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 5735510  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  5735511 ttattaagggacggagggagta 5735532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 26205825 - 26205704
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| ||||||||||||  |||||    
T  26205825 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcat 26205726  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  26205725 ttattaagggacggagggagta 26205704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 36 - 164
Target Start/End: Original strand, 1377172 - 1377299
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||| ||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||| | ||||    
T  1377172 tccaacaacatcttacatgatattatttatatttgtgaattagtataaaagtatg-tcaaagtatgtcaagtcaataatgtatattgtcaactggatcat 1377270  T
Q  136 ttattaagggatggagggagtaatgttta 164  Q
    |||||||||||  ||||||||||| ||||    
T  1377271 ttattaagggacagagggagtaatattta 1377299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 49768585 - 49768695
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  49768585 tccaacaacatcttacatgatattatttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 49768684  T
Q  136 ttattaaggga 146  Q
    |||||||||||    
T  49768685 ttattaaggga 49768695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 3901260 - 3901139
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| | ||||    
T  3901260 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactagatcat 3901161  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||| ||||    
T  3901160 ttattaagggacggaggaagta 3901139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 18360094 - 18359973
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |  ||||||||||||||||||||||||||||||||||||| ||||||    
T  18360094 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatataatcaaagtatgtcaagtcaataatgtatattgtcaactaggtcat 18359995  T
Q  136 ttattaagggatggagggagta 157  Q
     |||||||||| ||||||||||    
T  18359994 ctattaagggacggagggagta 18359973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 36602834 - 36602955
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |  ||||||||||||||||||||||||||||||||||||| ||||||    
T  36602834 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatataatcaaagtatgtcaagtcaataatgtatattgtcaactaggtcat 36602933  T
Q  136 ttattaagggatggagggagta 157  Q
     |||||||||| ||||||||||    
T  36602934 ctattaagggacggagggagta 36602955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 45198461 - 45198340
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||  | || ||||||||| | ||||||||||||||||||||||||| ||||||    
T  45198461 tccaacaacatcttacatgatattatttatctttgtgaattagtataaatttatgttcaaagtatattaagtcaataatgtatattgtcaactaggtcat 45198362  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  45198361 ttattaagggacggagggagta 45198340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 46803772 - 46803893
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  46803772 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 46803871  T
Q  136 ttattaagggatggagggagta 157  Q
    |||||||||||  |||||||||    
T  46803872 ttattaagggacagagggagta 46803893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 4209508 - 4209620
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | ||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||    
T  4209508 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaaatcaataatgtatattgtcaactaggtcatctattaagg 4209607  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  4209608 gacggagggagta 4209620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 5123278 - 5123162
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||||||  |||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  5123278 tccaacaacatcttacatcttattatttatctttgtgaattagtaaaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcat 5123179  T
Q  136 ttattaagggatggagg 152  Q
     |||||||||| |||||    
T  5123178 ctattaagggacggagg 5123162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 6494728 - 6494851
Alignment:
Q  36 tccaacaatatcttacatga--tattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtc 133  Q
    |||||||| ||||||||||   |||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||    
T  6494728 tccaacaacatcttacatgtagtattatttatctttgtgaattagtataaaagtatggtcaaagtatgttaagtcaataatgtatattgtcaactgggtc 6494827  T
Q  134 atttattaagggatggagggagta 157  Q
    ||||||||||||| ||| ||||||    
T  6494828 atttattaagggacggaaggagta 6494851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 39260251 - 39260132
Alignment:
Q  38 caacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcattt 137  Q
    |||||| ||||||||||||||||||||||||||||||||| || ||||||  | ||||||||||||||||||||||||||||||||||||| |||||| |    
T  39260251 caacaacatcttacatgatattatttatctttgtgaattagtagaaaagtaggatcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatct 39260152  T
Q  138 attaagggatggagggagta 157  Q
    ||||||||| ||||| ||||    
T  39260151 attaagggacggaggaagta 39260132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 19525835 - 19525717
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||||| |||||||| |||||||||||||||| ||||||    
T  19525835 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaatgatgtatattgtcaactaggtcat 19525736  T
Q  136 ttattaagggatggaggga 154  Q
    ||||| ||||| |||||||    
T  19525735 ttattgagggacggaggga 19525717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 28166414 - 28166524
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  28166414 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 28166513  T
Q  136 ttattaaggga 146  Q
    |||||||||||    
T  28166514 ttattaaggga 28166524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 25644499 - 25644620
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||    
T  25644499 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcat 25644598  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| | ||| ||||||||||    
T  25644599 ttattgaaggacggagggagta 25644620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 19170660 - 19170538
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | ||||||||||| |||||||||||||| |||||||||||   ||||||    
T  19170660 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtacgtcaagtcaataatatatattgtcaaacaggtcat 19170561  T
Q  136 ttattaagggatggagggagtaa 158  Q
    ||||| ||||| |||||||||||    
T  19170560 ttatttagggacggagggagtaa 19170538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 37688154 - 37688033
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||| ||||||||  |||||||||||| | ||||    
T  37688154 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaaatcaataatacatattgtcaactagatcat 37688055  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||| | ||||||||||    
T  37688054 ttattaaggaacggagggagta 37688033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 39786478 - 39786357
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||||||||||||||| | |||||||||||| ||||||||| ||||||||||||||||| |||||||| |||||||||||||  |||||    
T  39786478 tccaacaacatcttacatgatattattaaactttgtgaattagtataaaagtatggtcaaagtatgtcaaatcaataatatatattgtcaactaagtcat 39786379  T
Q  136 ttattaagggatggagggagta 157  Q
     |||||||||| | ||||||||    
T  39786378 ctattaagggacgaagggagta 39786357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 56 - 157
Target Start/End: Complemental strand, 55190667 - 55190566
Alignment:
Q  56 tattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggagggag 155  Q
    |||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||    
T  55190667 tattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggttatctattaagggacggagggag 55190568  T
Q  156 ta 157  Q
    ||    
T  55190567 ta 55190566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 6923059 - 6922940
Alignment:
Q  38 caacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcattt 137  Q
    |||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | |||||||||||||||||| |||||| ||||||||    
T  6923059 caacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattatcaactaggtcattt 6922960  T
Q  138 attaagggatggagggagta 157  Q
    ||| ||| | ||||||||||    
T  6922959 attgaggaacggagggagta 6922940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 19652375 - 19652256
Alignment:
Q  38 caacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcattt 137  Q
    |||||| ||||||||||||||||||| ||||| ||||||| || |||| | | |||||||||||||||||||||||||||||||||||||| | |||| |    
T  19652375 caacaacatcttacatgatattatttttctttttgaattagtagaaaaatatagtcaaagtatgtcaagtcaataatgtatattgtcaactagatcatct 19652276  T
Q  138 attaagggatggagggagta 157  Q
    ||||||||| ||||| ||||    
T  19652275 attaagggacggaggaagta 19652256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 159
Target Start/End: Complemental strand, 21859040 - 21858917
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||  ||||| ||||||||| || |||||| |||||||||||| |||||||||||||  |||||||||||| | ||||    
T  21859040 tccaacaacatcttacatgatattaagtatctatgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataattcatattgtcaactagatcat 21858941  T
Q  136 ttattaagggatggagggagtaat 159  Q
    ||||||||||| ||| ||||||||    
T  21858940 ttattaagggacggatggagtaat 21858917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 159
Target Start/End: Complemental strand, 21914903 - 21914780
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||  ||||| ||||||||| || |||||| |||||||||||| |||||||||||||  |||||||||||| | ||||    
T  21914903 tccaacaacatcttacatgatattaagtatctatgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataattcatattgtcaactagatcat 21914804  T
Q  136 ttattaagggatggagggagtaat 159  Q
    ||||||||||| ||| ||||||||    
T  21914803 ttattaagggacggatggagtaat 21914780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 163
Target Start/End: Complemental strand, 23603768 - 23603641
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| | ||||||||||||||||| ||||| ||||||| || |||| | || ||||||||||||||||||||||||||||||||||||| ||||||    
T  23603768 tccaacaacaacttacatgatattatttttctttttgaattagtagaaaaatatgttcaaagtatgtcaagtcaataatgtatattgtcaactaggtcat 23603669  T
Q  136 ttattaagggatggagggagtaatgttt 163  Q
     |||| ||| | |||||||||| |||||    
T  23603668 ctattgaggaacggagggagtagtgttt 23603641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 19633970 - 19633854
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||| ||||| ||||||| || |||| | ||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  19633970 tccaacaacatcttacatgatattatttttctttttgaattagtagaaaaatatggtcaaagtaggtcaagtcaataatatatattgtcaactaggtcat 19633871  T
Q  136 ttattaagggatggagg 152  Q
     |||| ||||| |||||    
T  19633870 ctattgagggacggagg 19633854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 50033163 - 50033264
Alignment:
Q  39 aacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcattta 138  Q
    ||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||||| ||||||||||||||||| ||||| | |||||| ||    
T  50033163 aacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaataatgtatatcgtcaaataggtcatcta 50033262  T
Q  139 tt 140  Q
    ||    
T  50033263 tt 50033264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 23256075 - 23256167
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 128  Q
    |||||||| ||||||||| ||||||||||| ||||||||||| || |||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  23256075 tccaacaacatcttacattatattatttatttttgtgaattagtagaaaagtatggtccaagtatgtcaaatcaataatgtatattgtcaact 23256167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 51737073 - 51736985
Alignment:
Q  38 caacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||| ||| | |||||||||||||||||||||||    
T  51737073 caacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaaatatattaagtcaataatgtatattgtcaa 51736985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 50035685 - 50035780
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatt 140  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||| ||||||||| ||||||| ||||||||||||||| | |||||| ||||    
T  50035685 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaacaatgtatattgtcaaataggtcatctatt 50035780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 19631448 - 19631550
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaata-taaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtca 134  Q
    |||||||| |||||||||||||||||||||||||||||||||  |  |||| | |||||||||||||| ||||| |||||||||||| |||| | |||||    
T  19631448 tccaacaacatcttacatgatattatttatctttgtgaattagcagaaaaaatatggtcaaagtatgttaagtctataatgtatattatcaaataggtca 19631547  T
Q  135 ttt 137  Q
    |||    
T  19631548 ttt 19631550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 40250717 - 40250838
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||  |||||| || ||||||||||| |||||  |||| ||||||| |  ||||||| |||||||||||||||||||||||||||||||  |||||    
T  40250717 tccaacaccatcttatataatattatttatatttgtatattagtataaaaataaggtcaaactatgtcaagtcaataatgtatattgtcaactatgtcat 40250816  T
Q  136 ttattaagggatggagggagta 157  Q
     ||||| |||| ||| ||||||    
T  40250817 ctattatgggacggaaggagta 40250838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 39195611 - 39195521
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||||| |||||| ||||||||||||||||||||  |||| ||||||| | |||||||||||||||| ||||| | |||| ||||||||    
T  39195611 tccaacaacatcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagtatgtcaggtcaaaactgtaaattgtcaa 39195521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 47278398 - 47278276
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    ||||||| |||||||||| ||||||||||||||||||||||  || |||| | || ||||||||| | |||||||||||| ||||||| || |  |||||    
T  47278398 tccaacattatcttacataatattatttatctttgtgaattgctagaaaaatatgatcaaagtatattaagtcaataatgcatattgttaaataagtcat 47278299  T
Q  136 ttattaagggatggagggagtaa 158  Q
     | |||| ||| |||||||||||    
T  47278298 ctcttaaaggacggagggagtaa 47278276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 19731267 - 19731200
Alignment:
Q  56 tattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgt 123  Q
    |||||||||||||| |||||||  |||||  | |||||||||||||| ||||||||||||||||||||    
T  19731267 tattatttatctttctgaattagcataaatatatggtcaaagtatgttaagtcaataatgtatattgt 19731200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 39194052 - 39194151
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||| ||| | |||||||||||| |||| || |||| |   |||||||||||| ||||||||| ||||||||||||| | ||||||    
T  39194052 tccaacaacatcttacattataatgtttatctttgtgtattagtagaaaaatacagtcaaagtatgttaagtcaatattgtatattgtcaaataggtcat 39194151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 50971599 - 50971650
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagt 87  Q
    |||||||| ||||||||||||||||||||||||||||||||| || ||||||    
T  50971599 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagt 50971650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 55997260 - 55997355
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatt 140  Q
    ||||||||||||||||||||| ||||||||||| || |||| | ||||||||  || | ||||||||||| |||||| |||| | |||||| ||||    
T  55997260 atcttacatgatattatttatttttgtgaattagtagaaaaatatggtcaaaaaatattaagtcaataatatatattatcaaataggtcatctatt 55997355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 42187059 - 42187015
Alignment:
Q  98 tatgtcaagtcaataatgtatattgtcaacttggtcatttattaa 142  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||    
T  42187059 tatgtcaagtcaataatgtatattgtcaactaggtcatctattaa 42187015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 26660559 - 26660614
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtat 100  Q
    |||||||||||||||||||| |||| |||||||||| |||| | ||||||||||||    
T  26660559 atcttacatgatattatttacctttatgaattaatagaaaaatatggtcaaagtat 26660614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 42187100 - 42187062
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaa 74  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  42187100 tccaacaacatcttacatgatattatttatctttgtgaa 42187062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 53568503 - 53568596
Alignment:
Q  48 ttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaa 142  Q
    |||||| ||||||||||||||||||||||| || |||| | |||||||| ||||| || |  |||||||||| ||||||||  ||||| ||||||    
T  53568503 ttacataatattatttatctttgtgaattagtagaaaaatatggtcaaaatatgttaa-tgtataatgtataatgtcaactgagtcatgtattaa 53568596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 140
Target Start/End: Original strand, 10181128 - 10181231
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||| | ||||| ||||||||||||  |||| || |||| |||||||||| ||||| ||||||||| || | |||||||| | | ||||    
T  10181128 tccaacaacatcttatacgatat-atttatctttgtatattagtagaaaaatgtggtcaaaatatgttaagtcaatagtgcacattgtcaaatagatcat 10181226  T
Q  136 ttatt 140  Q
    |||||    
T  10181227 ttatt 10181231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 37164128 - 37164029
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | | ||||||||| || | ||||| | |||||||| |||| | |||||| ||||||||    
T  37164128 atcttatatgatattatttatctttgtatattagtagaaaaatatagtcaaagtaagttaggtcaaaattgtatattttcaaatgggtcatctattaagg 37164029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 31152773 - 31152659
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||  ||    
T  31152773 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgtgg 31152674  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  31152673 gacggagggagtaat 31152659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 35755284 - 35755214
Alignment:
Q  56 tattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||||||||||| |  |||| ||||||| | || ||||| ||||||| |||||||||||| ||||||||    
T  35755284 tattatttatctttatatattagtataaaaatatgatcaaaatatgtcaggtcaataatgtaaattgtcaa 35755214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 46608325 - 46608271
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagta 99  Q
    |||||| ||||||||||||||||||||  |||| ||||||| | |||||||||||    
T  46608325 atcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagta 46608271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 8525367 - 8525480
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||| ||||  |||| || |||| | || |||||||| || | ||||| | || ||||| ||||   |||||||||||| ||    
T  8525367 atcttatatgatattatttatccttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgcatattttcaaacaggtcatttattatgg 8525466  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  8525467 gacggagggagtaa 8525480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 35064171 - 35064232
Alignment:
Q  91 gtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggagg 152  Q
    |||||||||||| |||| |||| | ||||||||||| | |||||| ||||| ||||||||||    
T  35064171 gtcaaagtatgttaagttaatattatatattgtcaaataggtcatctattatgggatggagg 35064232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 9965469 - 9965437
Alignment:
Q  94 aaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||||| |||||||||||||||||||||    
T  9965469 aaagtatgtcaggtcaataatgtatattgtcaa 9965437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 14958139 - 14958203
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtat 100  Q
    |||||||| |||||| |||||||||||||| |||||  |||| || |||| | ||||||||||||    
T  14958139 tccaacaacatcttatatgatattatttatttttgtatattagtagaaaaatatggtcaaagtat 14958203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 3e-51; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 27559715 - 27559837
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  27559715 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaaaaatgtatattgtcaactgggtcat 27559814  T
Q  136 ttattaagggatggagggagtaa 158  Q
    ||||||||||| |||||||||||    
T  27559815 ttattaagggacggagggagtaa 27559837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 34827052 - 34827173
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  34827052 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatatatattgtcaactgggtcat 34827151  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  34827152 ttattaagggacggagggagta 34827173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 44330524 - 44330646
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  44330524 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggttaaagtatgtcaagtcaataatgtatattgtcaactgggtcat 44330623  T
Q  136 ttattaagggatggagggagtaa 158  Q
    ||| ||||||| |||||||||||    
T  44330624 ttaataagggacggagggagtaa 44330646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 42038663 - 42038786
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||| |||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||   ||||    
T  42038663 tccaacaacatcttatatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgaatcat 42038762  T
Q  136 ttattaagggatggagggagtaat 159  Q
    ||||||||||| ||||||||||||    
T  42038763 ttattaagggacggagggagtaat 42038786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 44283400 - 44283281
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  44283400 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 44283301  T
Q  136 ttattaagggatggagggag 155  Q
    ||||||||||| ||||||||    
T  44283300 ttattaagggacggagggag 44283281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 7443012 - 7442891
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||| ||||||||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||| | ||||    
T  7443012 tccaacaacatcttacatgatattttttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactagatcat 7442913  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  7442912 ttattaagggacggagggagta 7442891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 18718379 - 18718500
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| || ||||||||| |||||||||||||| |||||||||||| ||||||    
T  18718379 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 18718478  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  18718479 ttattaagggacggagggagta 18718500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 4045354 - 4045233
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| || |||||||||||||||||||||||| ||||| ||||||| |||||||||| ||||||||||||| ||||||||||||||| | ||||||    
T  4045354 tccaacaacattttacatgatattatttatctttgtaaattagtataaaaatgtggtcaaaatatgtcaagtcaacaatgtatattgtcaaatgggtcat 4045255  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  4045254 ttattaagggacggagggagta 4045233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 9877204 - 9877083
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||| |||||||||||||||||||||||||| || |||| | |||||||||||||||||||||||||||||||||||||| | ||||||    
T  9877204 tccaacaacatcttatatgatattatttatctttgtgaattagtaaaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaattaggtcat 9877105  T
Q  136 ttattaagggatggagggagta 157  Q
     |||||||||| ||||||||||    
T  9877104 ctattaagggacggagggagta 9877083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 23671516 - 23671637
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||| |||||||||||||||||||||||||| || |||||| ||||||||||||  ||||||||||||| |||||||||||| ||||||    
T  23671516 tccaacaacatcttatatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtataccaagtcaataatgcatattgtcaactaggtcat 23671615  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  23671616 ttattaagggacggagggagta 23671637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 40425370 - 40425249
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||||||||||||||||||||||| |||||| || |||||| |||||||||||| |||| ||||||||| |||||||||||| ||||||    
T  40425370 tccaacaacatcttacatgatattatttatctttgcgaattagtagaaaagtatggtcaaagtatatcaaatcaataatgcatattgtcaactaggtcat 40425271  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  40425270 ttattaagggacggagggagta 40425249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 20517558 - 20517680
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| |||||||||||||| ||||||||||||  |||||    
T  20517558 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcat 20517657  T
Q  136 ttattaagggatggagggagtaa 158  Q
    ||||||||| | |||||||||||    
T  20517658 ttattaaggaacggagggagtaa 20517680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 3987353 - 3987232
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| |||||| ||||||| ||||||||||||  |||||    
T  3987353 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagttaataatgcatattgtcaactaagtcat 3987254  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  3987253 ttattaagggacggagggagta 3987232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 14372217 - 14372338
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||||||| |||||||||| ||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||| | ||||||    
T  14372217 tccaacaacatcttacatgttattatttatatttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaattaggtcat 14372316  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  14372317 ttattaagggacggagggagta 14372338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 14707655 - 14707535
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| || ||||||||  |||||||||||||| |||||||||||| ||||||    
T  14707655 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatg-tcaaagtacatcaagtcaataatgcatattgtcaactaggtcat 14707557  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  14707556 ttattaagggacggagggagta 14707535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 39418141 - 39418020
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| ||| ||||||||||||||||||||||||||||||||||||||  |||||    
T  39418141 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatgtagtcaaagtatgtcaagtcaataatgtatattgtcaactaagtcat 39418042  T
Q  136 ttattaagggatggagggagta 157  Q
      |||||| || ||||||||||    
T  39418041 ccattaagagacggagggagta 39418020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 41172878 - 41172757
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| |||||| || ||||||||| |||||||||||||| |||||||||||| | ||||    
T  41172878 tccaacaacatcttacatgatatcatttatctttgtgaattaatagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaactagatcat 41172779  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| || |||||||    
T  41172778 ttattaagggacggggggagta 41172757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 36 - 151
Target Start/End: Complemental strand, 36199072 - 36198957
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || ||||||  ||||||||||| |||| ||||||||| |||||||||||| ||||||    
T  36199072 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtacggtcaaagtatatcaaatcaataatgcatattgtcaactaggtcat 36198973  T
Q  136 ttattaagggatggag 151  Q
    ||||||||||| ||||    
T  36198972 ttattaagggacggag 36198957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 30708868 - 30708978
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||| ||||| || |||| | |||||||| ||| ||||||||||||||||||||||||||| ||||||    
T  30708868 tccaacaacatcttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaaatatatcaagtcaataatgtatattgtcaactaggtcat 30708967  T
Q  136 ttattaaggga 146  Q
    |||||||||||    
T  30708968 ttattaaggga 30708978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 32776015 - 32775902
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||| ||||||||||||| |||| |||||||| || |||| | |||||||||||||||||||||||||||||||||||||||| |||||| |||| |||    
T  32776015 atctttcatgatattatttttcttagtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatctattgagg 32775916  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  32775915 gacggagggagtaa 32775902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 41463638 - 41463517
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||| ||||| || |||| |||||| |||||||||||| |||||||||||||||||||||| | ||||    
T  41463638 tccaacaacatcttacatgatattatttatctttgtaaattagtagaaaaatgtggtgaaagtatgtcaaatcaataatgtatattgtcaactagatcat 41463539  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| || || ||| ||||||    
T  41463538 ttattgagagacggaaggagta 41463517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 151
Target Start/End: Original strand, 40598269 - 40598384
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | || | |||||||||||||||||||| ||||||    
T  40598269 tccaacaacatcttacatgatattatttatctttgtgaattattagaaaaatatggtcaaagtatattaaattaataatgtatattgtcaactaggtcat 40598368  T
Q  136 ttattaagggatggag 151  Q
    ||||| ||||| ||||    
T  40598369 ttattgagggagggag 40598384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 4083347 - 4083437
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||||| |||||||||||||||||||||||||| ||| || |||| | ||||||||||||||||||||||||||||||||||||||    
T  4083347 tccaacaatattttacatgatattatttatctttgtgatttagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaa 4083437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 43925195 - 43925074
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | || ||||||||||| |||||||||||||||||| |||| | |||| |    
T  43925195 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaataatgtatattatcaaataggtcgt 43925096  T
Q  136 ttattaagggatggagggagta 157  Q
     |||| ||||| ||||||||||    
T  43925095 ctattgagggacggagggagta 43925074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 24283081 - 24282960
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | | |||||| |||||||| |||||||| ||||||||||||| | ||||    
T  24283081 tccaacaacatcttacatgatattatttatctttgtgaattagtaaaaaaatatagtcaaaatatgtcaaatcaataatatatattgtcaactagatcat 24282982  T
Q  136 ttattaagggatggagggagta 157  Q
     |||| ||||| ||| ||||||    
T  24282981 ctattgagggacggaaggagta 24282960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 38963659 - 38963780
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||||||||||||| ||||||||||||||||||||||| || |||| | || |||||||| |||||||||||||| |||||||||||   | ||||    
T  38963659 tccaacaatatcttacataatattatttatctttgtgaattagtagaaaaatatgatcaaagtacgtcaagtcaataatatatattgtcaagcagatcat 38963758  T
Q  136 ttattaagggatggagggagta 157  Q
     |||| ||||| ||||||||||    
T  38963759 ctatttagggacggagggagta 38963780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 13399226 - 13399105
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| | ||||||||||||||||||||||||| ||||| || |||| | |||| |||| |||| ||||||||||||||||||||||||| | ||||    
T  13399226 tccaacaacagcttacatgatattatttatctttgtaaattagtagaaaaatatggttaaagaatgttaagtcaataatgtatattgtcaactagatcat 13399127  T
Q  136 ttattaagggatggagggagta 157  Q
     |||| ||||| || |||||||    
T  13399126 ctattgagggacggggggagta 13399105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 1110432 - 1110548
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||||| || |||||||||| ||||  ||| | ||||||    
T  1110432 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaataatgtttatttccaaataggtcat 1110531  T
Q  136 ttattaagggatggagg 152  Q
    || || ||||| |||||    
T  1110532 ttgttgagggacggagg 1110548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 38137652 - 38137533
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||||| ||||| ||||| ||||| ||||| | ||||||    
T  38137652 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtc-ataatatatatcgtcaaataggtcat 38137554  T
Q  136 ttattaagggatggagggagt 156  Q
     || | ||||| |||||||||    
T  38137553 ctaatgagggacggagggagt 38137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 42020325 - 42020202
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtc-aaagtatgtcaagtcaataatgtatattgtcaacttggtca 134  Q
    |||||||| ||||||||||||||||||||| ||||||||||| || || | | ||||| ||||||||| || |||||||||||||||||||| | ||| |    
T  42020325 tccaacaacatcttacatgatattatttatatttgtgaattagtagaataatatggtctaaagtatgttaaatcaataatgtatattgtcaaataggtta 42020226  T
Q  135 tttattaagggatggagggagtaa 158  Q
    | |||| ||||| |||||||||||    
T  42020225 tctattgagggacggagggagtaa 42020202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 16941932 - 16941842
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||||| ||||||||| |||||||| |||||||||||||| || |||||| || ||||||||| |||||||||||||| ||||||||||    
T  16941932 tccaacaacatcttacataatattattcatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaa 16941842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 17012597 - 17012507
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||||| ||||||||| |||||||| |||||||||||||| || |||||| || ||||||||| |||||||||||||| ||||||||||    
T  17012597 tccaacaacatcttacataatattattcatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaa 17012507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 332423 - 332504
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||||||||||||||||||||||||||| || |||| | |  ||||||||||| |||||||||||||||||||||||    
T  332423 atcttacatgatattatttatctttgtgaattagtaaaaaaatataatcaaagtatgttaagtcaataatgtatattgtcaa 332504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 151
Target Start/End: Original strand, 4045990 - 4046104
Alignment:
Q  36 tccaacaatatcttacatgatat-tatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtca 134  Q
    |||||||| |||||||||||||| | ||||||||||||||||| || |||||| ||  ||||||||||||| | | |||| ||||||||||||| |||||    
T  4045990 tccaacaacatcttacatgatatatttttatctttgtgaattagtagaaaagtatg--caaagtatgtcaaatgagtaatatatattgtcaactaggtca 4046087  T
Q  135 tttattaagggatggag 151  Q
    | |||||||||| ||||    
T  4046088 tctattaagggacggag 4046104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 43409425 - 43409503
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataat 114  Q
    ||||||||||||||  ||||||||||||||||||||  ||||||| |||| | |||||||||||| ||| |||||||||    
T  43409425 tccaacaatatcttttatgatattatttatctttgtatattaatagaaaaatatggtcaaagtatatcaggtcaataat 43409503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 27668079 - 27667958
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| || ||| |||||||||||||||||||   |||| || |||| | |||||||||||||||||||||| | |  | ||||||||    |||||    
T  27668079 tccaacaacattttatatgatattatttatctttgcatattactagaaaaatatggtcaaagtatgtcaagtcaaaattacaaattgtcaaacaagtcat 27667980  T
Q  136 ttattaagggatggagggagta 157  Q
     || ||||||||||||||||||    
T  27667979 ctaataagggatggagggagta 27667958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 30776294 - 30776201
Alignment:
Q  63 tatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggagggagtaatgtt 162  Q
    ||||||||| ||||| || |||| | | ||||||||||||||||||||||||||||  |||||    ||||||||||||| ||| |||||||||| ||||    
T  30776294 tatctttgtaaattagtagaaaaatattgtcaaagtatgtcaagtcaataatgtat--tgtca----ggtcatttattaatggacggagggagtattgtt 30776201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 7106418 - 7106508
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||||| || |||||||||||||||||||||||||||||| || |||| | || | | ||||||| || |||||| ||| | |||||||    
T  7106418 tccaacaacattttacatgatattatttatctttgtgaattagtagaaaaatatgattagagtatgttaactcaatattgttttttgtcaa 7106508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 37806903 - 37806811
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 128  Q
    ||||||||||||||| || |||||||||||||||||  |||| || |||| | |||| ||| ||||||| ||||| |||  | ||||||||||    
T  37806903 tccaacaatatcttatataatattatttatctttgtatattagtagaaaaatatggttaaaatatgtcaggtcaacaatacacattgtcaact 37806811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 2543957 - 2543858
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||| | |||||| |||||||||||||| |||||  ||| |||||||| | |||||||| ||| | |  ||||||||||||||| |||| | ||||||    
T  2543957 tccaacgacatcttatatgatattatttatttttgtatatttatataaaaatatggtcaaaatatattagatcaataatgtatattttcaaataggtcat 2543858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 15177481 - 15177427
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagta 99  Q
    |||||| ||||||||||||||||||||  |||| ||||||| | |||||||||||    
T  15177481 atcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagta 15177427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 38963907 - 38963793
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   ||||| |||||||||    
T  38963907 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcacttattaagg 38963808  T
Q  145 gatggagggagtaat 159  Q
    ||  |||||||||||    
T  38963807 gacagagggagtaat 38963793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 5030396 - 5030315
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||| ||||||||||||||||||||  |||| ||||||| |  | |||||||||||||  |||| || ||| ||||||||    
T  5030396 atcttatatgatattatttatctttgtatattagtataaaaatacgatcaaagtatgtcagatcaaaaaggtacattgtcaa 5030315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 42951480 - 42951521
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaatta 77  Q
    |||||||| ||||||||| |||||||||||| ||||||||||    
T  42951480 tccaacaacatcttacattatattatttatcgttgtgaatta 42951521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 20917763 - 20917727
Alignment:
Q  123 tcaacttggtcatttattaagggatggagggagtaat 159  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  20917763 tcaactaggtcatttattaagggacggagggagtaat 20917727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 25277880 - 25277924
Alignment:
Q  41 caatatcttacatgatattatttatctttgtgaattaatataaaa 85  Q
    |||||||||| ||||||||||||||||||||  |||| |||||||    
T  25277880 caatatcttatatgatattatttatctttgtatattagtataaaa 25277924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 42951543 - 42951622
Alignment:
Q  55 atattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||||||| |||||||||| || |||| | | |||||||||||| || |||||||| || |||||||| | ||||||    
T  42951543 atattatttatcgttgtgaattagtaaaaaa-tattgtcaaagtatgttaaatcaataatatacattgtcaaataggtcat 42951622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 1e-50; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 8796189 - 8796310
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  8796189 tccaacaatatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgttaagtcaataatgtatattgtcaactgggtcat 8796288  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  8796289 ttattaagggacggagggagta 8796310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 31854958 - 31855079
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||    
T  31854958 tccaacaacatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataacgtatattgtcaactgagtcat 31855057  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  31855058 ttattaagggacggagggagta 31855079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 22020416 - 22020538
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  22020416 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggttaaagtatgtcaagtcaataatgtatattgtcaactgggtcat 22020515  T
Q  136 ttattaagggatggagggagtaa 158  Q
    ||| ||||||| |||||||||||    
T  22020516 ttaataagggacggagggagtaa 22020538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 25435551 - 25435673
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||    
T  25435551 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaaatcaataatgtatattgtcaactgggtcat 25435650  T
Q  136 ttattaagggatggagggagtaa 158  Q
    ||||||||||| |||| ||||||    
T  25435651 ttattaagggacggagagagtaa 25435673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 18992043 - 18992166
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  18992043 tccaacaacatcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcat 18992142  T
Q  136 ttattaagggatggagggagtaat 159  Q
    ||||||||||| |||| |||||||    
T  18992143 ttattaagggacggagcgagtaat 18992166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 20662180 - 20662058
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  20662180 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 20662081  T
Q  136 ttattaagggatggagggagtaa 158  Q
    ||||||||||| |||||||||||    
T  20662080 ttattaagggacggagggagtaa 20662058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 643552 - 643431
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||    
T  643552 tccaacaacatcttacatgatattatttatctttgtgacttagtataaaagtatggtcaaagtatgtcaagtcaattatgtatattgtcaactgagtcat 643453  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  643452 ttatttagggacggagggagta 643431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 11114705 - 11114826
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||| |||||||||||||||||||||| | ||||    
T  11114705 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaaatatgtcaaatcaataatgtatattgtcaactggatcat 11114804  T
Q  136 ttattaagggatggagggagta 157  Q
    |||||||| || ||||||||||    
T  11114805 ttattaagagacggagggagta 11114826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 16696137 - 16696016
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | ||||||||||||||||||||||| |||||||||||||||| ||||||    
T  16696137 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaatgatgtatattgtcaactaggtcat 16696038  T
Q  136 ttattaagggatggagggagta 157  Q
     |||| ||||| ||||||||||    
T  16696037 ctattgagggacggagggagta 16696016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 24150881 - 24151002
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||| ||||||||||||   | ||    
T  24150881 tccaacaacatcttacatgatattatttatctttgtgaattaatagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaaattat 24150980  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  24150981 ttattaagggacggagggagta 24151002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 165
Target Start/End: Original strand, 30237307 - 30237436
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    ||||| |||||||||||| ||||| ||||||||||||||||| || |||| | ||||||||||||||||||||||||||||||||||||||||  |||||    
T  30237307 tccaataatatcttacattatattgtttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactatgtcat 30237406  T
Q  136 ttattaagggatggagggagtaatgtttat 165  Q
    ||||||||||| | |||||||||| |||||    
T  30237407 ttattaagggacgaagggagtaatatttat 30237436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 7097994 - 7097873
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||| | ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||||||||| |||||||||||||   ||||    
T  7097994 tccaactacatcttacatgatattatttatctttatgaattagtataaaagtatggtcaaagtatgttaagtcaataatctatattgtcaactgaatcat 7097895  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  7097894 ttattaagggacggagggagta 7097873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 25163304 - 25163425
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    ||||||||||||||| |||||||||||||||||||||||||| || |||| | |||||||||||| | |||||||||||||||||||||||||  |||||    
T  25163304 tccaacaatatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactatgtcat 25163403  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  25163404 ttattgagggacggagggagta 25163425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 13207074 - 13206953
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | ||||||||| |||| |||||||||| |||||||||||| | ||||||    
T  13207074 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagaatgttaagtcaataaagtatattgtcaaataggtcat 13206975  T
Q  136 ttattaagggatggagggagta 157  Q
     |||| || || ||||||||||    
T  13206974 ctattgagtgacggagggagta 13206953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 163
Target Start/End: Original strand, 33121682 - 33121809
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||| ||||||| || |||| | |||||||||||  ||||||||||||| |||||||||||   | ||||    
T  33121682 tccaacaacatcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaagtacatcaagtcaataatatatattgtcaaacagatcat 33121781  T
Q  136 ttattaagggatggagggagtaatgttt 163  Q
    ||||| |||||  ||||||||| |||||    
T  33121782 ttatttagggacagagggagtattgttt 33121809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 157
Target Start/End: Complemental strand, 19068889 - 19068771
Alignment:
Q  39 aacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcattta 138  Q
    ||||| |||||||||||||||| || ||||||||||||| || |||| | |||||||||||||| || ||||||||| || ||||||| | | |||| ||    
T  19068889 aacaacatcttacatgatattacttctctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaataatgcattttgtcaaatagatcatcta 19068790  T
Q  139 ttaagggatggagggagta 157  Q
    || |||||||||| |||||    
T  19068789 ttgagggatggagagagta 19068771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 29986279 - 29986210
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaa 105  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| ||||    
T  29986279 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaa 29986210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 19788699 - 19788625
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaa 110  Q
    |||||||| ||||||||||||||||||||| |||||  |||| || |||| | |||| ||||||||||| |||||    
T  19788699 tccaacaacatcttacatgatattatttatatttgtatattagtagaaaaatatggttaaagtatgtcaggtcaa 19788625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 29979064 - 29979024
Alignment:
Q  117 atattgtcaacttggtcatttattaagggatggagggagta 157  Q
    |||||||||||| ||||||||||||||||| ||||||||||    
T  29979064 atattgtcaactaggtcatttattaagggacggagggagta 29979024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 9022952 - 9022838
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| |||||||||||||| |||||  |||| || |||| | |||||||||||||| | ||||| | || ||||| ||||   |||||||||||   |    
T  9022952 atcttatatgatattatttatttttgtatattagtagaaaaatatggtcaaagtatgttaggtcaaaattgcatattttcaaacaggtcatttattgcag 9022853  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  9022852 gacggagggagtaat 9022838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 12869377 - 12869435
Alignment:
Q  52 atgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaa 110  Q
    ||||||||||||||||||||  |||| || |||| | |||||||| |||||||||||||    
T  12869377 atgatattatttatctttgtatattagtagaaaaatatggtcaaactatgtcaagtcaa 12869435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 19762392 - 19762318
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaa 110  Q
    |||||||| ||||||||||||||||||||| |||||  |||| || |||| | |||| ||| ||||||| |||||    
T  19762392 tccaacaaaatcttacatgatattatttatatttgtatattagtaaaaaaatatggttaaactatgtcaggtcaa 19762318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 24798502 - 24798616
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||  ||    
T  24798502 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 24798601  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  24798602 gacggagggagtaat 24798616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 2141680 - 2141568
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | || |||||||| || | ||||| | |||| ||| ||||   ||||| |||||||||    
T  2141680 atcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgtacattttcaaacaggtcacttattaagg 2141581  T
Q  145 gatggagggagta 157  Q
    || ||| ||||||    
T  2141580 gacggacggagta 2141568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 32541433 - 32541545
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | |||||||||||  | | ||||| | || ||||| ||||   |||||||||||  ||    
T  32541433 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaattgcatattttcaaacaggtcatttattgcgg 32541532  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  32541533 gacggagggagta 32541545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 1e-50; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 32002135 - 32002014
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  32002135 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcat 32002036  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  32002035 ttattaagggacggagggagta 32002014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 32334759 - 32334638
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  32334759 tccaacaacatcttacatgatattatttatctttgtcaattagtataaaagtgtggtcaaagtatgtcaaatcaataatgtatattgtcaactgggtcat 32334660  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  32334659 ttattaagggacggagggagta 32334638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 39894921 - 39895042
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||| |||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  39894921 tccaacaacatcttatatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcat 39895020  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  39895021 ttattaagggacggagggagta 39895042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 4924959 - 4924834
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||| | ||||||    
T  4924959 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatatatattgtcaattaggtcat 4924860  T
Q  136 ttattaagggatggagggagtaatgt 161  Q
     |||||||||| ||||| ||||||||    
T  4924859 ctattaagggacggaggaagtaatgt 4924834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 5213043 - 5212922
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  5213043 tccaacaacatcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcat 5212944  T
Q  136 ttattaagggatggagggagta 157  Q
    |||||||| || ||||||||||    
T  5212943 ttattaagagacggagggagta 5212922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 29627408 - 29627529
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||| |||||||||||||||| ||||||    
T  29627408 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatgtatattgtcaactgggtcat 29627507  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  29627508 ttatttagggacggagggagta 29627529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 42148447 - 42148568
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  42148447 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 42148546  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  42148547 ttattaagggacggagggagta 42148568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 39036550 - 39036673
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | ||||||||||||| |||||||||||||||||||||||||| ||||||    
T  39036550 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgacaagtcaataatgtatattgtcaactaggtcat 39036649  T
Q  136 ttattaagggatggagggagtaat 159  Q
     |||||||||| ||||||| ||||    
T  39036650 ctattaagggacggagggaataat 39036673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 40512801 - 40512679
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| | ||||||||||||||| ||||||||||||||||||||||  |||||    
T  40512801 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatagtcaaagtatgtcaaatcaataatgtatattgtcaactgagtcat 40512702  T
Q  136 ttattaagggatggagggagtaa 158  Q
    ||||||||||| |||| ||||||    
T  40512701 ttattaagggacggagagagtaa 40512679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 22613830 - 22613709
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||    
T  22613830 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcat 22613731  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  22613730 ttattgagggacggagggagta 22613709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 23988717 - 23988838
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| ||||||||||||  |||||    
T  23988717 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcat 23988816  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||| ||||||    
T  23988817 ttattaagggacggatggagta 23988838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 35448118 - 35447997
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||| ||| |||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  35448118 tccaacaacatcttagatgttattatttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 35448019  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  35448018 ttattaagggacggagggagta 35447997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 51 - 159
Target Start/End: Original strand, 5364579 - 5364687
Alignment:
Q  51 catgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatgga 150  Q
    ||||||||||||||||||||||||||| || |||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  5364579 catgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacgga 5364678  T
Q  151 gggagtaat 159  Q
    | |||||||    
T  5364679 gagagtaat 5364687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 35290426 - 35290549
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||| ||||||||||||||||||||||| || |||| | ||||||||||||| |||||||||||||||||||||||||| ||||||    
T  35290426 tccaacaacatcttacataatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgacaagtcaataatgtatattgtcaactaggtcat 35290525  T
Q  136 ttattaagggatggagggagtaat 159  Q
     |||||||||| ||||| ||||||    
T  35290526 ctattaagggacggaggaagtaat 35290549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 37843696 - 37843574
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||| ||||||||||||| || |||| | |||||||||||||||||||||||||||||||||||||| | ||||||    
T  37843696 tccaacaacatcttacatgatattatttttctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaagtaggtcat 37843597  T
Q  136 ttattaagggatggagggagtaa 158  Q
     |||| ||||| |||||||||||    
T  37843596 ctattgagggacggagggagtaa 37843574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 4299954 - 4299833
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||| |||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||    
T  4299954 tccaacaacatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcat 4299855  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  4299854 ttattgagggacggagggagta 4299833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 14475351 - 14475230
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||| ||||||||||||| || |||| | |||||||||||||||||||||||||||||||||||||||| ||||||    
T  14475351 tccaacaacatcttacatgatattatttttctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcat 14475252  T
Q  136 ttattaagggatggagggagta 157  Q
     |||| | ||| ||||||||||    
T  14475251 ctattgaaggacggagggagta 14475230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 16048225 - 16048346
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||    
T  16048225 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcat 16048324  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||| ||||||    
T  16048325 ttattgagggacggacggagta 16048346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 39405904 - 39406025
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||    
T  39405904 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcat 39406003  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||| ||||||    
T  39406004 ttattgagggaaggatggagta 39406025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 37516285 - 37516401
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| ||||||||||||||||||||||||||| ||| ||    
T  37516285 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgtatattgtcaactaggttat 37516384  T
Q  136 ttattaagggatggagg 152  Q
     |||||||||| |||||    
T  37516385 ctattaagggacggagg 37516401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 38698103 - 38698226
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||||||||||||||| |||||||| ||||| || |||| | |||||||||||| |||||||||||||| ||||||||||||  |||||    
T  38698103 tccaacaacatcttacatgatattattcatctttgtaaattagtaaaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcat 38698202  T
Q  136 ttattaagggatggagggagtaat 159  Q
    ||||||||||| ||||||||||||    
T  38698203 ttattaagggacggagggagtaat 38698226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 43517181 - 43517059
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    ||||| || ||||||||||||||||||||||||||||||||| || |||||| || ||||||||||||||||||||||| |||||||||||||  |||||    
T  43517181 tccaataacatcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatatatattgtcaactaagtcat 43517082  T
Q  136 ttattaagggatggagggagtaa 158  Q
     |||||||||| ||||| |||||    
T  43517081 ctattaagggacggaggaagtaa 43517059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 970278 - 970399
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||| |||||||||||||||||||||||||| || |||| | |||||||||||| | |||| |||||||||||||||||||| ||||||    
T  970278 tccaacaacatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagttaataatgtatattgtcaactaggtcat 970377  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  970378 ttattgagggacggagggagta 970399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 41411278 - 41411157
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | ||||||||||| || ||||||||||| ||||||||||| |  |||||    
T  41411278 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtacgttaagtcaataatatatattgtcaaatacgtcat 41411179  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||| ||||||    
T  41411178 ttatttagggacggatggagta 41411157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 1830795 - 1830916
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||| ||||||| || |||| | ||||||||||| || ||||||||||| ||||||||||| |  |||||    
T  1830795 tccaacaacatcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaagtacgttaagtcaataatatatattgtcaaatacgtcat 1830894  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||| ||||||    
T  1830895 ttatttagggacggatggagta 1830916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 163
Target Start/End: Original strand, 2864094 - 2864221
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||| |||||||||||||||||||||||||| || |||| | |||| ||||||||| |||||||||||||||||| |||| |  |||||    
T  2864094 tccaacaacatcttatatgatattatttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaataatgtatattatcaaatatgtcat 2864193  T
Q  136 ttattaagggatggagggagtaatgttt 163  Q
     |||| |||||  || ||||||||||||    
T  2864194 ctattgagggacagatggagtaatgttt 2864221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 143
Target Start/End: Original strand, 25563642 - 25563747
Alignment:
Q  38 caacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcattt 137  Q
    |||||| |||||||||||||| |||||||||||||||||| || |||| | || ||||||||||| || ||||||||||| |||||||||| |||||| |    
T  25563642 caacaacatcttacatgatataatttatctttgtgaattagtagaaaaatatgatcaaagtatgttaaatcaataatgtacattgtcaactaggtcatct 25563741  T
Q  138 attaag 143  Q
    ||||||    
T  25563742 attaag 25563747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 43067380 - 43067482
Alignment:
Q  55 atattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggaggga 154  Q
    ||||||||||||||||| ||||| || |||| | |||||||||||| | || |||||||||||||||||||||| ||||||||||| ||||| ||| |||    
T  43067380 atattatttatctttgtaaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaactaggtcatttattgagggacggatgga 43067479  T
Q  155 gta 157  Q
    |||    
T  43067480 gta 43067482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 140
Target Start/End: Original strand, 40316262 - 40316366
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||| ||||||| || |||| | |||||||| || || ||||||||||| ||||||||||| |  |||||    
T  40316262 tccaacaacatcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaattacgttaagtcaataatatatattgtcaaatacgtcat 40316361  T
Q  136 ttatt 140  Q
    |||||    
T  40316362 ttatt 40316366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 19087728 - 19087647
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||| |||||||||||||||||||||||||||| || |||| | |||||||||||| | || ||||||||||||||||||||    
T  19087728 atctaacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaa 19087647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 19868807 - 19868724
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtata 119  Q
    ||||| || ||||||||||||||||||||||||||||||||| || |||| | |  ||||||||||| ||||||||||||||||    
T  19868807 tccaataacatcttacatgatattatttatctttgtgaattagtagaaaaatatcttcaaagtatgttaagtcaataatgtata 19868724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 30779867 - 30779775
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 128  Q
    |||||||| ||||||||||||||||||||||||||| ||||| || |||| | |  ||||||| | | || ||||||||||||||||||||||    
T  30779867 tccaacaacatcttacatgatattatttatctttgtaaattagtagaaaaatataatcaaagtgtattaaatcaataatgtatattgtcaact 30779775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 16954763 - 16954881
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaata--atgtatattgtcaacttggtc 133  Q
    |||||||| || |||||||||||||||||||     |||||| || |||| | ||||||||| |||||||||||| |  || |||||||||||||  |||    
T  16954763 tccaacaacattttacatgatattatttatc-----gaattagtagaaaaatatggtcaaagcatgtcaagtcaaaaatatatatattgtcaactaagtc 16954857  T
Q  134 atttattaagggatggagggagta 157  Q
    || ||||||| || ||||||||||    
T  16954858 atctattaagagacggagggagta 16954881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 13548325 - 13548212
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   ||||| |||||||||    
T  13548325 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcacttattaagg 13548226  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  13548225 gacggagggagtaa 13548212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 19889793 - 19889834
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaatta 77  Q
    ||||||||  ||||||||||||||||||||||||||||||||    
T  19889793 tccaacaacgtcttacatgatattatttatctttgtgaatta 19889834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 20040367 - 20040480
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||| ||    
T  20040367 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgg 20040466  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  20040467 gacggagggagtaa 20040480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 30721637 - 30721750
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  ||||||| |||| | |||||||| || || | ||||| | || | ||| |||| |  ||||||||||  ||    
T  30721637 atcttatatgatattatttatctttgtatattaatagaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaatatgtcatttattgcgg 30721736  T
Q  145 gatggagggagtaa 158  Q
    ||||||||||||||    
T  30721737 gatggagggagtaa 30721750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 5985060 - 5985025
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgt 71  Q
    ||||||||||||||| ||||||||||||||||||||    
T  5985060 tccaacaatatcttatatgatattatttatctttgt 5985025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 31191129 - 31191183
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagta 99  Q
    |||||| ||||||||||||||||||||  ||||||| |||| | |||||||||||    
T  31191129 atcttatatgatattatttatctttgtatattaatagaaaaatatggtcaaagta 31191183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 35641890 - 35641800
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||||| || ||| |||||||||||||||||| |  |||| || |||| | ||||||||||||||||  |||| |||| | ||||||||    
T  35641890 tccaacaacattttatatgatattatttatctttatatattagtagaaaaatatggtcaaagtatgtcagatcaaaaatgcacattgtcaa 35641800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 1098287 - 1098175
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||  ||    
T  1098287 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 1098188  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  1098187 gacggagggagta 1098175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 21961367 - 21961443
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaata 112  Q
    |||||||| ||||||  ||||||||||||| ||| |  |||| || | || | ||||||||||||||||||||||||    
T  21961367 tccaacaacatcttaattgatattatttatttttatatattagtagataaatatggtcaaagtatgtcaagtcaata 21961443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 28143046 - 28142986
Alignment:
Q  39 aacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagta 99  Q
    ||||| |||||| ||||||||||||||||||||  |||| || |||| | |||||||||||    
T  28143046 aacaacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 28142986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 1e-50; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 38458870 - 38458991
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| | ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  38458870 tccaacaacaccttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcat 38458969  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||||||||||||||    
T  38458970 ttattaagggatggagggagta 38458991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 32988470 - 32988349
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||    
T  32988470 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaaatatgtcaagtcaataatgtatattgtcaactggatcat 32988371  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  32988370 ttattaagggacggagggagta 32988349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 25531918 - 25532039
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| ||||||||||||||||||||||||||| ||||||    
T  25531918 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgtatattgtcaactaggtcat 25532017  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  25532018 ttattaagggacggagggagta 25532039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 50539400 - 50539521
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||    
T  50539400 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaattatgtatattgtcaactgagtcat 50539499  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  50539500 ttattaagggacggagggagta 50539521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 36 - 159
Target Start/End: Complemental strand, 30529171 - 30529048
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||| ||| ||||||||||||||||||||||||||| ||||||    
T  30529171 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaattatctcaagtcaataatgtatattgtcaactaggtcat 30529072  T
Q  136 ttattaagggatggagggagtaat 159  Q
    ||||||||||| ||||||||||||    
T  30529071 ttattaagggacggagggagtaat 30529048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 49805373 - 49805251
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  49805373 tccaacaacatcttacatgatattatttatctttgtgaattagtattaaaatgtggtcaaagtatgtcaagtcaacaatgtatattgtcaactgggtcat 49805274  T
Q  136 ttattaagggatggagggagtaa 158  Q
    ||||||||| | |||||||||||    
T  49805273 ttattaaggaacggagggagtaa 49805251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 50876504 - 50876626
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  50876504 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 50876603  T
Q  136 ttattaagggatggagggagtaa 158  Q
    ||||||||||| |||||||||||    
T  50876604 ttattaagggacggagggagtaa 50876626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 1849840 - 1849962
Alignment:
Q  36 tccaacaatatcttacatgata-ttatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtca 134  Q
    |||||||| ||||||||||||| |||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1849840 tccaacaacatcttacatgatacttatttatttttgtgaattagtagaaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtca 1849939  T
Q  135 tttattaagggatggagggagta 157  Q
    |||||||||||| ||| ||||||    
T  1849940 tttattaagggacggatggagta 1849962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 37281232 - 37281353
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| ||||||||||||| | ||||    
T  37281232 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatatatattgtcaactagatcat 37281331  T
Q  136 ttattaagggatggagggagta 157  Q
     |||||||||| ||||||||||    
T  37281332 ctattaagggacggagggagta 37281353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 42708640 - 42708761
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  42708640 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 42708739  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||| ||||||    
T  42708740 ttattaagggacggatggagta 42708761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 29161983 - 29162106
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| || ||||||||| ||||||||||||||||||||||||||| | || |    
T  29161983 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatctcaagtcaataatgtatattgtcaactagatcgt 29162082  T
Q  136 ttattaagggatggagggagtaat 159  Q
    ||||||||||| ||||||||||||    
T  29162083 ttattaagggacggagggagtaat 29162106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 4605139 - 4605260
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||| | ||| |||||||||| ||||||||||||||||||||||| | ||||||    
T  4605139 tccaacaatatcttacatgatattatttatctttgtgaattaataggaaaatatggccaaagtatgtaaagtcaataatgtatattgtcaaataggtcat 4605238  T
Q  136 ttattaagggatggagggagta 157  Q
     |||||||||| ||||||||||    
T  4605239 ctattaagggacggagggagta 4605260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 16265173 - 16265294
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||    
T  16265173 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcat 16265272  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  16265273 ttattgagggacggagggagta 16265294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 16266302 - 16266423
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||    
T  16266302 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcat 16266401  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  16266402 ttattgagggacggagggagta 16266423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 39354385 - 39354264
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||| ||| |||||||||||||| ||| |||||||| ||||||    
T  39354385 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatatcaagtcaataatgcatactgtcaactaggtcat 39354286  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  39354285 ttattaagggacggagggagta 39354264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 48264932 - 48264811
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||| ||||||| || |||||| |||||||||||| |||| ||||||||| |||||||||||| ||||||    
T  48264932 tccaacaacatcttacatgatattatttatctttctgaattagtagaaaagtatggtcaaagtatatcaactcaataatgcatattgtcaactaggtcat 48264833  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  48264832 ttattaagggacggagggagta 48264811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 52379129 - 52379250
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||| ||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  52379129 tccaacaacatcttacatgatattatttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 52379228  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||| ||| ||||||||||    
T  52379229 ttattaaaggacggagggagta 52379250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 48219763 - 48219644
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| ||||||| |||| |||||||||||||| |||||||||||| ||||||    
T  48219763 tccaacaacatcttacatgatattatttatctttgtgaattactagaaaagtatggtcaacgtatatcaagtcaataatgcatattgtcaactaggtcat 48219664  T
Q  136 ttattaagggatggagggag 155  Q
    ||||||||||| ||| ||||    
T  48219663 ttattaagggacggaaggag 48219644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 3898692 - 3898571
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||| ||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||    
T  3898692 tccaacaacatcttacataatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcat 3898593  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  3898592 ttattgagggacggagggagta 3898571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 23569795 - 23569674
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | ||||||||||| |||||||||||||| |||||||||||   ||||||    
T  23569795 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtacgtcaagtcaataatatatattgtcaaacaggtcat 23569696  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  23569695 ttatttagggacggagggagta 23569674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 24982491 - 24982612
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||| ||||||||||||  ||||||    
T  24982491 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatatatattgtcaacaaggtcat 24982590  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  24982591 ttattgagggacggagggagta 24982612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 43680210 - 43680331
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||| | |||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||    
T  43680210 tccaacaacatcttataagatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcat 43680309  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||| ||||| ||||||||||    
T  43680310 ttattgagggacggagggagta 43680331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 26441783 - 26441895
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| |||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||||||| |||    
T  26441783 atcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagg 26441882  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  26441883 gacggagggagta 26441895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 157
Target Start/End: Complemental strand, 45234951 - 45234849
Alignment:
Q  55 atattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggaggga 154  Q
    |||||| |||||||||| |||||||| |||||| || |||||||||||||| | |||||||||||||||||||| |||||||||||||| || |||||||    
T  45234951 atattacttatctttgtaaattaataaaaaagtatgatcaaagtatgtcaaattaataatgtatattgtcaactaggtcatttattaagagacggaggga 45234852  T
Q  155 gta 157  Q
    |||    
T  45234851 gta 45234849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 16751563 - 16751470
Alignment:
Q  47 cttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatt 140  Q
    ||||||||||||||||||||||||||||||| || |||| | |||||||| ||||| ||||||||||||||||||||||||| |||||| ||||    
T  16751563 cttacatgatattatttatctttgtgaattagtaaaaaaatatggtcaaaatatgttaagtcaataatgtatattgtcaactaggtcatgtatt 16751470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 41501728 - 41501607
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||| | ||||||||| ||  || || || |||||||||||||| ||||||||||||||||| |||| ||||||    
T  41501728 tccaacaacatcttacatgatattatttatttgtgtgaattagtaggaatgtatgatcaaagtatgtcaattcaataatgtatattgtgaactaggtcat 41501629  T
Q  136 ttattaagggatggagggagta 157  Q
     ||| ||||||| |||||||||    
T  41501628 ctatcaagggattgagggagta 41501607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 47222364 - 47222459
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatt 140  Q
    |||||| |||||||||||||||||||||||||| || |||| | |||||||||||||| |||||||||||||||||| |||| | |||||||||||    
T  47222364 atcttaaatgatattatttatctttgtgaattagtaaaaaaatatggtcaaagtatgttaagtcaataatgtatattatcaaataggtcatttatt 47222459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 3529316 - 3529406
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||||| ||||||||||||||||||||||||| ||||||| || |||| | |||||||||||||| ||||||||||| |||||||||||    
T  3529316 tccaacaacatcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaagtatgttaagtcaataatatatattgtcaa 3529406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 140
Target Start/End: Original strand, 14075876 - 14075977
Alignment:
Q  38 caacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcattt 137  Q
    |||||| ||||||||| ||||||||||| ||||||||||| || |||| | |||| ||| ||||| ||||||||||||||||||||||||| |||||| |    
T  14075876 caacaacatcttacat-atattatttatatttgtgaattagtagaaaaatatggttaaaatatgttaagtcaataatgtatattgtcaactaggtcatgt 14075974  T
Q  138 att 140  Q
    |||    
T  14075975 att 14075977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 21034650 - 21034560
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||||| ||| ||||||||||||||||||||||||| ||| || |||| | |  ||||||||||| |||||||||||||||||||||||    
T  21034650 tccaacaacatcctacatgatattatttatctttgtgatttagtagaaaaatataatcaaagtatgttaagtcaataatgtatattgtcaa 21034560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 50481416 - 50481537
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| |||||||||| ||||||||| |||||||||||| || ||||   | |||||||||||| | ||||||||||||||||||||| | || |||    
T  50481416 tccaacaacatcttacatggtattatttacctttgtgaattagtagaaaaaaattgtcaaagtatgttaggtcaataatgtatattgtcaaataggccat 50481515  T
Q  136 ttattaagggatggagggagta 157  Q
     |||| ||||| | ||||||||    
T  50481516 ctattgagggacgtagggagta 50481537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 48376288 - 48376375
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||||| ||||||||||||||||| |||||||||||||   || ||||   || ||||||||| | |||||||||||||||||||||||    
T  48376288 tccaacaacatcttacatgatattatctatctttgtgaat---tagaaaaacatgttcaaagtatcttaagtcaataatgtatattgtcaa 48376375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 31971508 - 31971418
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||||| |||||| |||||||||||||||||||| ||||| || |||| | || ||||| ||||| || | |||||| |||||||||||    
T  31971508 tccaacaacatcttatatgatattatttatctttgttaattagtagaaaaatatgatcaaaatatgttaaattaataatatatattgtcaa 31971418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 120
Target Start/End: Original strand, 23330592 - 23330677
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagt-atgtcaagtcaataatgtatat 120  Q
    |||||||| ||||||||||||||||||||| |||||||||||  ||||||   | |||||||| |||| ||||||||| |||||||    
T  23330592 tccaacaacatcttacatgatattatttatgtttgtgaattagcataaaaacattgtcaaagtaatgttaagtcaatattgtatat 23330677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 161
Target Start/End: Complemental strand, 45299430 - 45299314
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| ||||||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||  ||    
T  45299430 atcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 45299331  T
Q  145 gatggagggagtaatgt 161  Q
    || ||||||||||||||    
T  45299330 gacggagggagtaatgt 45299314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 27990834 - 27990757
Alignment:
Q  38 caacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatg 115  Q
    |||||| |||||||||||| |||||||| |||||  |||| || |||| | |||||||||||||| | ||||||||||    
T  27990834 caacaacatcttacatgatgttatttatttttgtatattagtagaaaaatatggtcaaagtatgttaggtcaataatg 27990757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 32565886 - 32565927
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaatta 77  Q
    ||||| || |||||||||||||||||||||||||||||||||    
T  32565886 tccaaaaacatcttacatgatattatttatctttgtgaatta 32565927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 126
Target Start/End: Original strand, 50295886 - 50295973
Alignment:
Q  39 aacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||| |||||| ||||||||||||||||||||  ||||  | |||| | ||| |||||||||||| ||||| |||| | ||||||||    
T  50295886 aacaacatcttatatgatattatttatctttgtatattagcagaaaaatatgggcaaagtatgtcaggtcaaaaatgcaaattgtcaa 50295973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 151
Target Start/End: Complemental strand, 32968225 - 32968119
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| ||||||| |   |||||| |||||||  |||| | |||||||||||||   |||||| || |||||    
T  32968225 atcttatatgatattatttatctttgtatattagtataaaaatacagtcaaaatatgtcagttcaaaattgtatattgtcaaacaggtcatctaataagg 32968126  T
Q  145 gatggag 151  Q
    || ||||    
T  32968125 gacggag 32968119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 157
Target Start/End: Original strand, 41855675 - 41855789
Alignment:
Q  43 atatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaa 142  Q
    |||||||| |||||||||||||||| |||  |||| || |||| | ||||||||||| |  | ||||| | || | ||| |||| | ||||||||||||     
T  41855675 atatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattac 41855774  T
Q  143 gggatggagggagta 157  Q
    |||| ||||||||||    
T  41855775 gggacggagggagta 41855789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 38737933 - 38737869
Alignment:
Q  56 tattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatat 120  Q
    |||||||||||||||||||||| || |||| | || | ||||||||| || |||||||| |||||    
T  38737933 tattatttatctttgtgaattagtagaaaaatatgattaaagtatgttaaatcaataatatatat 38737869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 12892 - 13002
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  12892 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcat 12991  T
Q  136 ttattaaggga 146  Q
    |||||||||||    
T  12992 ttattaaggga 13002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 91; Significance: 4e-44; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 10533 - 10643
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  10533 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcat 10632  T
Q  136 ttattaaggga 146  Q
    |||||||||||    
T  10633 ttattaaggga 10643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 14199 - 14309
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  14199 tccaacaacatcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcat 14298  T
Q  136 ttattaaggga 146  Q
    |||||||||||    
T  14299 ttattaaggga 14309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 41338 - 41217
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||||  |||||    
T  41338 tccaacaacatcttacatgatattatttatctttgtgaattagtataaaagtatggttaaagtatgtcaagtcaataacgtatattgtcaactaagtcat 41239  T
Q  136 ttattaagggatggagggagta 157  Q
    |||||||| || ||||||||||    
T  41238 ttattaagagacggagggagta 41217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 15337 - 15216
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||| ||||| || |  ||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  15337 tccaacaacatcttacatgatattatttatctttgtaaattagtagactagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcat 15238  T
Q  136 ttattaagggatggagggagta 157  Q
    ||||||||||| ||||||||||    
T  15237 ttattaagggacggagggagta 15216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 36 - 146
Target Start/End: Complemental strand, 44229 - 44119
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  44229 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcat 44130  T
Q  136 ttattaaggga 146  Q
    |||||||||||    
T  44129 ttattaaggga 44119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 117463 - 117579
Alignment:
Q  38 caacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcattt 137  Q
    |||||| ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| |||||||||||||  |||||||||||| ||||||||    
T  117463 caacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatacatattgtcaactaggtcattt 117562  T
Q  138 attaagggatggaggga 154  Q
    ||||||||| |||||||    
T  117563 attaagggacggaggga 117579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 1254 - 1369
Alignment:
Q  36 tccaacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||| ||||||||||||||||||||||||||||||||| || |||| | ||||||||||      |||||||||||||||||||||||| ||||||    
T  1254 tccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagt------agtcaataatgtatattgtcaactaggtcat 1347  T
Q  136 ttattaagggatggagggagta 157  Q
     |||| | ||| ||||||||||    
T  1348 ctattgacggacggagggagta 1369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 60 - 157
Target Start/End: Original strand, 14502 - 14599
Alignment:
Q  60 atttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggagggagta 157  Q
    |||| ||||||||||||| || |||| | | |||||||||| |||| |||||||||||||||||||||| |||||| ||||  |||| ||| ||||||    
T  14502 atttttctttgtgaattagtagaaaaatatagtcaaagtatatcaaatcaataatgtatattgtcaactaggtcatctattgtgggacggatggagta 14599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 140
Target Start/End: Complemental strand, 38333 - 38249
Alignment:
Q  56 tattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatt 140  Q
    ||||||||| |||||||| ||| || |||| | |||||||||||| | || |||| ||||||||||||||| | |||||| ||||    
T  38333 tattatttacctttgtgacttagtagaaaaatatggtcaaagtattttaaatcaaaaatgtatattgtcaaataggtcatctatt 38249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 1101 - 1036
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaa 110  Q
    |||||| ||||||||||||||||||||  |||| ||||||| |  ||||||| ||||||| |||||    
T  1101 atcttatatgatattatttatctttgtatattagtataaaaatacggtcaaaatatgtcaggtcaa 1036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0281 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 13222 - 13162
Alignment:
Q  39 aacaatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagta 99  Q
    |||||||||||| |||||||||||||||| |||  |||| || |||| | |||||||||||    
T  13222 aacaatatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagta 13162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 5488 - 5376
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||  ||    
T  5488 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 5389  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  5388 gacggagggagta 5376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 730 times since January 2019
Visitors: 6705