View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0913_low_71 (Length: 279)

Name: NF0913_low_71
Description: NF0913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0913_low_71
NF0913_low_71
[»] chr4 (16 HSPs)
chr4 (130-245)||(33186158-33186273)
chr4 (143-245)||(15880753-15880855)
chr4 (130-245)||(35812171-35812285)
chr4 (160-245)||(52873251-52873335)
chr4 (161-245)||(362189-362272)
chr4 (130-237)||(13844636-13844744)
chr4 (160-245)||(46642777-46642861)
chr4 (170-245)||(9923353-9923427)
chr4 (170-245)||(11479432-11479506)
chr4 (160-242)||(13844485-13844566)
chr4 (130-209)||(14185252-14185331)
chr4 (130-234)||(46642934-46643038)
chr4 (160-245)||(15868794-15868877)
chr4 (163-245)||(630862-630942)
chr4 (203-245)||(19609528-19609570)
chr4 (130-218)||(21189704-21189793)
[»] chr8 (14 HSPs)
chr8 (130-245)||(29763549-29763664)
chr8 (130-242)||(21579887-21579999)
chr8 (130-245)||(42560208-42560323)
chr8 (130-245)||(18760591-18760706)
chr8 (170-245)||(32807321-32807396)
chr8 (159-245)||(41680832-41680918)
chr8 (161-245)||(27472391-27472474)
chr8 (161-245)||(38550086-38550169)
chr8 (160-245)||(1327119-1327203)
chr8 (130-229)||(3273212-3273310)
chr8 (151-225)||(39833949-39834023)
chr8 (203-245)||(19139969-19140011)
chr8 (203-245)||(39936816-39936858)
chr8 (189-245)||(20982747-20982803)
[»] chr5 (15 HSPs)
chr5 (130-245)||(12122202-12122317)
chr5 (130-245)||(21557726-21557841)
chr5 (130-245)||(36460226-36460341)
chr5 (143-245)||(24212424-24212526)
chr5 (130-245)||(21555060-21555175)
chr5 (130-245)||(30615812-30615926)
chr5 (132-236)||(31455758-31455862)
chr5 (143-237)||(35852687-35852781)
chr5 (132-236)||(31455145-31455249)
chr5 (160-245)||(5889269-5889353)
chr5 (130-236)||(5889092-5889199)
chr5 (160-245)||(29915167-29915251)
chr5 (189-245)||(17875270-17875326)
chr5 (160-245)||(21871656-21871739)
chr5 (160-245)||(21875936-21876019)
[»] chr7 (18 HSPs)
chr7 (130-245)||(11085055-11085170)
chr7 (130-245)||(30820937-30821052)
chr7 (131-245)||(15213755-15213869)
chr7 (133-245)||(36685934-36686046)
chr7 (130-245)||(11092793-11092908)
chr7 (143-245)||(9320423-9320525)
chr7 (162-245)||(38480293-38480376)
chr7 (130-237)||(15439349-15439457)
chr7 (130-245)||(37727607-37727723)
chr7 (160-245)||(8468370-8468454)
chr7 (160-245)||(14270138-14270222)
chr7 (161-245)||(45847735-45847818)
chr7 (160-245)||(17232564-17232648)
chr7 (142-245)||(11391870-11391974)
chr7 (201-245)||(32434394-32434438)
chr7 (203-245)||(11066672-11066714)
chr7 (203-245)||(12371482-12371524)
chr7 (203-245)||(13148278-13148320)
[»] chr3 (16 HSPs)
chr3 (130-245)||(31224635-31224750)
chr3 (130-242)||(11912980-11913092)
chr3 (130-242)||(15447681-15447793)
chr3 (147-237)||(6808201-6808291)
chr3 (162-245)||(31415460-31415543)
chr3 (160-245)||(49969963-49970048)
chr3 (130-245)||(1988912-1989028)
chr3 (160-245)||(18439941-18440025)
chr3 (160-245)||(20630191-20630275)
chr3 (170-245)||(49389772-49389848)
chr3 (160-245)||(12269513-12269597)
chr3 (191-237)||(40812050-40812096)
chr3 (170-245)||(5841985-5842061)
chr3 (130-227)||(12269677-12269773)
chr3 (187-229)||(30175304-30175346)
chr3 (203-245)||(40807200-40807242)
[»] scaffold1351 (1 HSPs)
scaffold1351 (131-237)||(1630-1736)
[»] chr2 (10 HSPs)
chr2 (131-237)||(24865452-24865558)
chr2 (130-245)||(2524410-2524525)
chr2 (131-226)||(7672240-7672335)
chr2 (142-237)||(22501053-22501148)
chr2 (142-237)||(22508987-22509082)
chr2 (132-245)||(6576430-6576543)
chr2 (189-237)||(22501147-22501195)
chr2 (189-237)||(22509081-22509129)
chr2 (189-245)||(24883657-24883713)
chr2 (170-245)||(24436247-24436321)
[»] chr1 (12 HSPs)
chr1 (132-245)||(12328538-12328651)
chr1 (143-245)||(8885453-8885555)
chr1 (151-237)||(51274290-51274376)
chr1 (170-237)||(51326907-51326974)
chr1 (160-245)||(28194543-28194627)
chr1 (160-229)||(43543069-43543137)
chr1 (130-237)||(43697470-43697578)
chr1 (160-245)||(43697316-43697400)
chr1 (130-237)||(28194365-28194473)
chr1 (161-245)||(46382652-46382733)
chr1 (133-165)||(51326966-51326998)
chr1 (191-234)||(48301078-48301121)
[»] scaffold0599 (2 HSPs)
scaffold0599 (130-242)||(4674-4786)
scaffold0599 (130-242)||(256-368)
[»] scaffold0737 (1 HSPs)
scaffold0737 (130-245)||(6359-6474)
[»] scaffold0071 (1 HSPs)
scaffold0071 (130-237)||(14404-14511)
[»] chr6 (15 HSPs)
chr6 (130-245)||(20734128-20734243)
chr6 (133-245)||(34296953-34297065)
chr6 (145-245)||(22421023-22421123)
chr6 (143-245)||(2201175-2201277)
chr6 (130-230)||(27851273-27851373)
chr6 (164-245)||(19399814-19399895)
chr6 (160-245)||(25956715-25956799)
chr6 (130-237)||(25956537-25956645)
chr6 (147-245)||(18927880-18927977)
chr6 (161-245)||(31630622-31630705)
chr6 (160-245)||(27851111-27851195)
chr6 (203-245)||(18708704-18708746)
chr6 (203-245)||(23151072-23151114)
chr6 (203-245)||(27322224-27322266)
chr6 (170-245)||(28708678-28708754)
[»] scaffold0395 (1 HSPs)
scaffold0395 (143-245)||(10951-11053)
[»] scaffold0434 (1 HSPs)
scaffold0434 (159-245)||(6769-6855)
[»] scaffold0061 (2 HSPs)
scaffold0061 (141-245)||(15419-15523)
scaffold0061 (141-245)||(24477-24581)
[»] scaffold0080 (1 HSPs)
scaffold0080 (138-245)||(59295-59401)
[»] scaffold0100 (1 HSPs)
scaffold0100 (160-245)||(36142-36226)
[»] scaffold0009 (1 HSPs)
scaffold0009 (160-245)||(85191-85275)
[»] scaffold0371 (1 HSPs)
scaffold0371 (130-245)||(3120-3234)
[»] scaffold0116 (4 HSPs)
scaffold0116 (160-245)||(43878-43962)
scaffold0116 (130-237)||(43700-43808)
scaffold0116 (130-237)||(47620-47728)
scaffold0116 (160-200)||(47798-47837)
[»] scaffold0815 (1 HSPs)
scaffold0815 (174-245)||(540-611)
[»] scaffold0004 (1 HSPs)
scaffold0004 (160-229)||(362964-363032)
[»] scaffold0810 (2 HSPs)
scaffold0810 (169-245)||(2988-3063)
scaffold0810 (130-199)||(3066-3136)
[»] scaffold0335 (1 HSPs)
scaffold0335 (146-245)||(861-959)
[»] scaffold0001 (1 HSPs)
scaffold0001 (147-245)||(76946-77042)
[»] scaffold0513 (1 HSPs)
scaffold0513 (160-245)||(10963-11047)
[»] scaffold0802 (1 HSPs)
scaffold0802 (147-245)||(5455-5552)
[»] scaffold0075 (1 HSPs)
scaffold0075 (160-245)||(8379-8462)
[»] scaffold0384 (1 HSPs)
scaffold0384 (203-245)||(8192-8234)
[»] scaffold0375 (1 HSPs)
scaffold0375 (203-245)||(9108-9150)
[»] scaffold0134 (1 HSPs)
scaffold0134 (203-245)||(10032-10074)
[»] scaffold0679 (1 HSPs)
scaffold0679 (170-245)||(2449-2525)


Alignment Details
Target: chr4 (Bit Score: 108; Significance: 3e-54; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 130 - 245
Target Start/End: Complemental strand, 33186273 - 33186158
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33186273 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 33186174  T
Q  230 tgttatatttgatgat 245  Q
    |||||||| |||||||    
T  33186173 tgttatatatgatgat 33186158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 143 - 245
Target Start/End: Complemental strand, 15880855 - 15880753
Alignment:
Q  143 taagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgat 242  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  15880855 taagatgatcaatattgatgatttactttgattattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgat 15880756  T
Q  243 gat 245  Q
    |||    
T  15880755 gat 15880753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 35812171 - 35812285
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||| || ||||||||||||||| |||  ||||||  |||||||||||||||| ||  ||||||||||| ||||||| |||||||||||||||||||    
T  35812171 cagagagtataaataagatgattaatgttgtggatttaagttgatgattaaatgtggaag-atttatatattgtgaaagatgttgatatgaagttgtaat 35812269  T
Q  230 tgttatatttgatgat 245  Q
     |||||||| ||||||    
T  35812270 ggttatattggatgat 35812285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 52873251 - 52873335
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  52873251 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 52873335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 245
Target Start/End: Complemental strand, 362272 - 362189
Alignment:
Q  161 tgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||| |||| ||| |||| ||||||    
T  362272 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagacgttgatatgaagttataatggttgtattagatgat 362189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 13844744 - 13844636
Alignment:
Q  130 cagagaggatgaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaa 228  Q
    |||||||||||| |||||||||| ||||||  |||||||| ||||||||||||||||||||||| |||||| | ||||||  ||||||||| ||||| ||    
T  13844744 cagagaggatgattaagatgatttaatattattgatttacgttgatgattaaatgtgaaaatatctatataatgtgaaagttgttgatatggagttgcaa 13844645  T
Q  229 ttgttatat 237  Q
     ||||||||    
T  13844644 atgttatat 13844636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 46642861 - 46642777
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||| |||||||||||| ||||| || ||||||| | | ||||||||||||||||||||||||||| |||||||||||||||    
T  46642861 atgatttaatttgatgattaa-tgtgagaagatttataaactgtgaaagacgttgatatgaagttgtaatggttatatttgatgat 46642777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 9923427 - 9923353
Alignment:
Q  170 ttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||||||||  ||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  9923427 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 9923353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 11479432 - 11479506
Alignment:
Q  170 ttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||||||||  ||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  11479432 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 11479506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 242
Target Start/End: Complemental strand, 13844566 - 13844485
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgat 242  Q
    ||||||||||||||| ||||| ||||| |||||||||||||| ||||||| | ||||||||||||||||| ||| ||||||||    
T  13844566 atgatttactttgattattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgat 13844485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 209
Target Start/End: Complemental strand, 14185331 - 14185252
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaaga 209  Q
    ||||||| |||||||||||||||||  ||| || ||||  |||||| ||||||||||||||||||||||||| |||||||    
T  14185331 cagagagtatgaataagatgattaacgttgttgttttaagttgatggttaaatgtgaaaatatttatatattgtgaaaga 14185252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 46643038 - 46642934
Alignment:
Q  130 cagagaggatgaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaa 228  Q
    |||||||||||| |||||||||| ||||||| || || |  ||||||||||| || ||||| ||||||||||| ||||||  ||| ||||||||||||||    
T  46643038 cagagaggatgactaagatgatttaatattgttgtttaaagttgatgattaa-tgcgaaaagatttatatattgtgaaagttgttaatatgaagttgtaa 46642940  T
Q  229 ttgtta 234  Q
    ||||||    
T  46642939 ttgtta 46642934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 15868794 - 15868877
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||||||||||||||| || || |||||| ||||||| |||| || | |||||||||||||||||  |||||| |||||||    
T  15868794 atgatttactttgatgattaa-tgagagaatatt-atatattgtgaatgatgatgatatgaagttgtaatgattatatctgatgat 15868877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 245
Target Start/End: Original strand, 630862 - 630942
Alignment:
Q  163 atttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||||||| || || |||||| ||||||| |||| || | |||||||||||||||||  || |||||||||||    
T  630862 atttactttgatgattaa-tgagagaatatt-atatattgtgaatgatgatgatatgaagttgtaatgattgtatttgatgat 630942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 245
Target Start/End: Complemental strand, 19609570 - 19609528
Alignment:
Q  203 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  19609570 tgaaagatgttgatatgaagttgtaatggttatattggatgat 19609528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 21189704 - 21189793
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatga-ttaaatgtgaaaatatttatatattatgaaagacgttgatat 218  Q
    ||||||| ||||||| ||||| ||||  || |||||||  |||| || ||||| ||| |||||||||||| |||||||||| ||||||||    
T  21189704 cagagagaatgaatatgatgactaatgatgttgatttaagttgacgaattaaaagtggaaatatttatatgttatgaaagatgttgatat 21189793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 7e-52; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 29763549 - 29763664
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29763549 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 29763648  T
Q  230 tgttatatttgatgat 245  Q
    |||||||| |||||||    
T  29763649 tgttatatatgatgat 29763664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 21579887 - 21579999
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21579887 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 21579986  T
Q  230 tgttatatttgat 242  Q
    |||||||| ||||    
T  21579987 tgttatatatgat 21579999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 42560208 - 42560323
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  42560208 cagagaggatgaataagatgattaataatgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaaattgtaat 42560307  T
Q  230 tgttatatttgatgat 245  Q
    |||||||| |||||||    
T  42560308 tgttatatatgatgat 42560323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 245
Target Start/End: Complemental strand, 18760706 - 18760591
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||| ||||||||||||||||||||||  | ||||  | |||||||||||||||||| ||||||||||| ||||||| |||||||||||||| ||||    
T  18760706 cagagagtatgaataagatgattaatattgtgggtttaagtagatgattaaatgtgaaaagatttatatattgtgaaagatgttgatatgaagttataat 18760607  T
Q  230 tgttatatttgatgat 245  Q
     |||||||||||||||    
T  18760606 ggttatatttgatgat 18760591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 32807396 - 32807321
Alignment:
Q  170 ttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  32807396 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgat 32807321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 245
Target Start/End: Original strand, 41680832 - 41680918
Alignment:
Q  159 gatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||  |||||||||||||||||||||||||||||||| |||||||  ||||||| || ||||||||||||||| |||||||    
T  41680832 gatgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagatattgatatcaaattgtaattgttatatatgatgat 41680918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 27472391 - 27472474
Alignment:
Q  161 tgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  27472391 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 27472474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 38550086 - 38550169
Alignment:
Q  161 tgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  38550086 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 38550169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 1327119 - 1327203
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||||||||||||||| ||||| |||||||||||||| |||| || ||||||||||||||||||| ||| |||| ||||||    
T  1327119 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaacgatgttgatatgaagttgtaatggttgtattagatgat 1327203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 229
Target Start/End: Complemental strand, 3273310 - 3273212
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||| |||||||||||||||||| ||   ||||||  |||||||||||||||| ||| ||||||||||| ||||| | |||| ||||||||||||||    
T  3273310 cagagagtatgaataagatgattaatgttatggatttaagttgatgattaaatgtg-aaagatttatatattgtgaaaaatgttggtatgaagttgtaat 3273212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 39834023 - 39833949
Alignment:
Q  151 ttaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttg 225  Q
    ||||||||| |||||||| |||||||||||||||||||| || ||||||   |||| |  |||||||||||||||    
T  39834023 ttaatattgttgatttacgttgatgattaaatgtgaaaagatctatataacgtgaatgttgttgatatgaagttg 39833949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 245
Target Start/End: Complemental strand, 19140011 - 19139969
Alignment:
Q  203 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  19140011 tgaaagatgttgatatgaagttgtaatggttatattggatgat 19139969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 39936816 - 39936858
Alignment:
Q  203 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  39936816 tgaaagatgttgatatgaagttgtaatggttatattggatgat 39936858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 20982747 - 20982803
Alignment:
Q  189 atatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||| |||||||| |||||||  |||||||||||||||||| ||| |||| ||||||    
T  20982747 atatatatatattgtgaaagatattgatatgaagttgtaatggttgtattagatgat 20982803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 7e-52; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 12122202 - 12122317
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12122202 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 12122301  T
Q  230 tgttatatttgatgat 245  Q
    |||||||| |||||||    
T  12122302 tgttatatatgatgat 12122317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 21557726 - 21557841
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21557726 cagagaggatgaataagatgattaatattgatgttttagtttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 21557825  T
Q  230 tgttatatttgatgat 245  Q
    |||||||| |||||||    
T  21557826 tgttatatatgatgat 21557841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 130 - 245
Target Start/End: Complemental strand, 36460341 - 36460226
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  36460341 cagagaggatgaacaagatgattaataatgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 36460242  T
Q  230 tgttatatttgatgat 245  Q
    |||||||| |||||||    
T  36460241 tgttatatatgatgat 36460226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 143 - 245
Target Start/End: Complemental strand, 24212526 - 24212424
Alignment:
Q  143 taagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgat 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  24212526 taagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgat 24212427  T
Q  243 gat 245  Q
    |||    
T  24212426 gat 24212424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 21555060 - 21555175
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||    
T  21555060 cagagaggatgaataagatgattaatattgatgttttagtttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgacataaagttgtaat 21555159  T
Q  230 tgttatatttgatgat 245  Q
    |||||||| |||||||    
T  21555160 tgttatatatgatgat 21555175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 130 - 245
Target Start/End: Complemental strand, 30615926 - 30615812
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  30615926 cagagaggatgaataagatgattaatattgataatttacttttatgattaaatgtgaaaata-ttatatattgtgaaagacgttgatatgaagttgtaat 30615828  T
Q  230 tgttatatttgatgat 245  Q
    ||||||| ||||||||    
T  30615827 tgttataattgatgat 30615812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 31455862 - 31455758
Alignment:
Q  132 gagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattg 231  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |    
T  31455862 gagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatatgaagttgtaatcg 31455763  T
Q  232 ttata 236  Q
    |||||    
T  31455762 ttata 31455758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 35852781 - 35852687
Alignment:
Q  143 taagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  35852781 taagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatat 35852687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 31455249 - 31455145
Alignment:
Q  132 gagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattg 231  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||| |    
T  31455249 gagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatattaagttgtaatcg 31455150  T
Q  232 ttata 236  Q
    |||||    
T  31455149 ttata 31455145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 5889269 - 5889353
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||| | ||||||||||||||||| ||| |||||||||||    
T  5889269 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgat 5889353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 5889092 - 5889199
Alignment:
Q  130 cagagaggatgaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaa 228  Q
    |||||||||||| || ||||||| ||||||| |||||||| |||||||||||||||||||| || |||||| | ||||||  ||||||||| ||||| ||    
T  5889092 cagagaggatgattatgatgatttaatattgttgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgtagttgcaa 5889191  T
Q  229 ttgttata 236  Q
    ||||||||    
T  5889192 ttgttata 5889199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 29915167 - 29915251
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||| ||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  29915167 atgatctactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 29915251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 17875326 - 17875270
Alignment:
Q  189 atatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||||| |   |||||||||||||||||||| |||||||||||| |||||||    
T  17875326 atatttatataatgataaagacgttgatatgaagttctaattgttatatatgatgat 17875270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 21871656 - 21871739
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||| |||||| || || |||||| ||||||| |||| || | |||||||||||||||||  || |||||||||||    
T  21871656 atgatttactttgacgattaa-tgagagaatatt-atatattgtgaatgatgatgatatgaagttgtaatgattgtatttgatgat 21871739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 21875936 - 21876019
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||| |||||| || || |||||| ||||||| |||| || | |||||||||||||||||  || |||||||||||    
T  21875936 atgatttactttgacgattaa-tgagagaatatt-atatattgtgaatgatgatgatatgaagttgtaatgattgtatttgatgat 21876019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 130 - 245
Target Start/End: Complemental strand, 11085170 - 11085055
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||    
T  11085170 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaactatttatatattgtgaaagacgttgatatgaaattgtaat 11085071  T
Q  230 tgttatatttgatgat 245  Q
    |||||||| |||||||    
T  11085070 tgttatatatgatgat 11085055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 30820937 - 30821052
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  30820937 cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaagttgtaat 30821036  T
Q  230 tgttatatttgatgat 245  Q
    |||||||| |||||||    
T  30821037 tgttatatatgatgat 30821052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 131 - 245
Target Start/End: Complemental strand, 15213869 - 15213755
Alignment:
Q  131 agagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaatt 230  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||    
T  15213869 agagaggatgaataagatgattaataatgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacattgatatgaaattgtaatt 15213770  T
Q  231 gttatatttgatgat 245  Q
    ||||||| |||||||    
T  15213769 gttatatatgatgat 15213755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 36685934 - 36686046
Alignment:
Q  133 agaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgt 232  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||    
T  36685934 agaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgctgatatgaagttttaattgt 36686033  T
Q  233 tatatttgatgat 245  Q
    ||||| |||||||    
T  36686034 tatatatgatgat 36686046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 130 - 245
Target Start/End: Complemental strand, 11092908 - 11092793
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  11092908 cagagagtgtgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaaattgtaat 11092809  T
Q  230 tgttatatttgatgat 245  Q
    |||||||| |||||||    
T  11092808 tgttatatatgatgat 11092793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 143 - 245
Target Start/End: Original strand, 9320423 - 9320525
Alignment:
Q  143 taagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgat 242  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  9320423 taagatgattaatattgatgatttattttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgat 9320522  T
Q  243 gat 245  Q
    |||    
T  9320523 gat 9320525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 38480376 - 38480293
Alignment:
Q  162 gatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  38480376 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 38480293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 15439457 - 15439349
Alignment:
Q  130 cagagaggatgaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaa 228  Q
    |||||||||||| |||||||||| ||||||| |||||||| |||||||||||||||||||| || ||||   | ||||||  ||||||||||||||||||    
T  15439457 cagagaggatgactaagatgatttaatattgttgatttacgttgatgattaaatgtgaaaagatctatactatgtgaaagttgttgatatgaagttgtaa 15439358  T
Q  229 ttgttatat 237  Q
    |||||||||    
T  15439357 ttgttatat 15439349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 37727607 - 37727723
Alignment:
Q  130 cagagaggatgaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaa 228  Q
    |||||||||||| |||||||||| ||||||| || ||||| |||||||||||||||||||| || |||||| | ||||||  || |||||||||||||||    
T  37727607 cagagaggatgattaagatgatttaatattgttgctttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgtagatatgaagttgtaa 37727706  T
Q  229 ttgttatatttgatgat 245  Q
    | ||| |||||||||||    
T  37727707 tggttgtatttgatgat 37727723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 8468454 - 8468370
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  8468454 atgatttactttgatgattaa-tgtgataatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 8468370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 14270138 - 14270222
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  14270138 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 14270222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 45847735 - 45847818
Alignment:
Q  161 tgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  45847735 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 45847818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 17232648 - 17232564
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||| ||| ||| |||| ||||||    
T  17232648 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttggaatggttgtattagatgat 17232564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 245
Target Start/End: Original strand, 11391870 - 11391974
Alignment:
Q  142 ataagatgattaatattgatgatttactttgatgattaaatgtga-aaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttg 240  Q
    |||||||||||||| |||  ||||||  |||||||||||||||   ||| ||||||||||| ||||||| | | ||| ||||||||||| |||||||| |    
T  11391870 ataagatgattaatgttgtggatttaaattgatgattaaatgtacgaaagatttatatattgtgaaagatgctcataagaagttgtaatggttatattgg 11391969  T
Q  241 atgat 245  Q
    |||||    
T  11391970 atgat 11391974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 32434394 - 32434438
Alignment:
Q  201 tatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||||    
T  32434394 tatgaaagatgttgatatgaagttgtaatggttatattggatgat 32434438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 245
Target Start/End: Complemental strand, 11066714 - 11066672
Alignment:
Q  203 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  11066714 tgaaagatgttgatatgaagttgtaatagttatattggatgat 11066672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 245
Target Start/End: Complemental strand, 12371524 - 12371482
Alignment:
Q  203 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  12371524 tgaaagatgttgatatgaagttgtaatggttatattggatgat 12371482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 13148278 - 13148320
Alignment:
Q  203 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  13148278 tgaaagatgttgatatgaagttgtaatggttatattagatgat 13148320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 31224635 - 31224750
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  31224635 cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaat 31224734  T
Q  230 tgttatatttgatgat 245  Q
    |||||||| |||||||    
T  31224735 tgttatatatgatgat 31224750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 11913092 - 11912980
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  11913092 cagagaggatgaataagatgattaataatgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 11912993  T
Q  230 tgttatatttgat 242  Q
    |||||||| ||||    
T  11912992 tgttatatatgat 11912980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 15447681 - 15447793
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||    
T  15447681 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgtaat 15447780  T
Q  230 tgttatatttgat 242  Q
    |||||||| ||||    
T  15447781 tgttatatatgat 15447793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 6808291 - 6808201
Alignment:
Q  147 atgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  6808291 atgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatat 6808201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 31415543 - 31415460
Alignment:
Q  162 gatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  31415543 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgat 31415460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 49969963 - 49970048
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||    
T  49969963 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaatggttatatttgatgat 49970048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 1988912 - 1989028
Alignment:
Q  130 cagagaggatgaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaa 228  Q
    |||||||||||| |||||||||| ||||||| ||||| || |||||||||||||||||||| || |||||| | ||||||  ||||||||||||||||||    
T  1988912 cagagaggatgattaagatgatttaatattgttgattcacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgaagttgtaa 1989011  T
Q  229 ttgttatatttgatgat 245  Q
    | ||| |||||||||||    
T  1989012 tggttgtatttgatgat 1989028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 18439941 - 18440025
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||||||||||||||| ||||| ||||| |||||||| ||||||| | ||||||||||||||||| ||| |||||||||||    
T  18439941 atgatttactttgatgattaa-tgtgagaatatctatatattgtgaaagatgatgatatgaagttgtaatggttgtatttgatgat 18440025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 20630191 - 20630275
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||| |||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  20630191 atgatttactttgacgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgat 20630275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 49389772 - 49389848
Alignment:
Q  170 ttgatgattaaatgtgaaaatattta--tatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||||||||||||||||||||  |||||| |||| |  |||||||||||||||||||||||||||||||||||    
T  49389772 ttgatgattaaatgtgaaaatatttagatatattgtgaa-gttgttgatatgaagttgtaattgttatatttgatgat 49389848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 12269597 - 12269513
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||  ||||||||||| ||||| || ||||||| ||| |||| ||||||||||||||||||||||  ||||||||||||||    
T  12269597 atgatttaagttgatgattaa-tgtgagaagatttataaattttgaaggacgttgatatgaagttgtaatgattatatttgatgat 12269513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 40812096 - 40812050
Alignment:
Q  191 atttatatattatgaaagacgttgatatgaagttgtaattgttatat 237  Q
    ||||||||||| ||||||| ||||||||||||||||||| |||||||    
T  40812096 atttatatattgtgaaagatgttgatatgaagttgtaatggttatat 40812050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 5842061 - 5841985
Alignment:
Q  170 ttgatgattaaatgtga-aaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||||   ||| ||||||||||| ||||||| | | ||| ||||||||||| |||||||||||||||    
T  5842061 ttgatgattaaatgtacgaaagatttatatattgtgaaagatgctcataagaagttgtaatggttatatttgatgat 5841985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 227
Target Start/End: Complemental strand, 12269773 - 12269677
Alignment:
Q  130 cagagaggatgaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgta 227  Q
    |||||||||||| |||||||||| ||||||| || || |  ||||||||||| ||  |||| ||||||||||| ||||||  |||||||||||||||||    
T  12269773 cagagaggatgactaagatgatttaatattgttgtttaaagttgatgattaa-tga-aaaagatttatatattgtgaaagttgttgatatgaagttgta 12269677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 30175304 - 30175346
Alignment:
Q  187 aaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||||||||| | ||||||| |||||||||||||||||||    
T  30175304 aaatatttatatactgtgaaagatgttgatatgaagttgtaat 30175346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 245
Target Start/End: Complemental strand, 40807242 - 40807200
Alignment:
Q  203 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  40807242 tgaaagatgttgatatgaagttgtaatggttatattggatgat 40807200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 1736 - 1630
Alignment:
Q  131 agagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaatt 230  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1736 agagaggattaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaatt 1637  T
Q  231 gttatat 237  Q
    |||||||    
T  1636 gttatat 1630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 6e-49; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 131 - 237
Target Start/End: Original strand, 24865452 - 24865558
Alignment:
Q  131 agagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaatt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  24865452 agagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaatt 24865551  T
Q  231 gttatat 237  Q
    |||||||    
T  24865552 gttatat 24865558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 2524410 - 2524525
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||    
T  2524410 cagagagtatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatcaaattgtaat 2524509  T
Q  230 tgttatatttgatgat 245  Q
    ||||| || |||||||    
T  2524510 tgttacatatgatgat 2524525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 131 - 226
Target Start/End: Original strand, 7672240 - 7672335
Alignment:
Q  131 agagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7672240 agagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgt 7672335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 22501148 - 22501053
Alignment:
Q  142 ataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  22501148 ataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatat 22501053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 22509082 - 22508987
Alignment:
Q  142 ataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  22509082 ataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatat 22508987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 6576543 - 6576430
Alignment:
Q  132 gagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattg 231  Q
    ||||| |||||||||||||||||| |||  ||||||  |||||||||||| ||||||| ||||||||||| ||||||| ||||||||||||||||||| |    
T  6576543 gagagtatgaataagatgattaatgttgtggatttaagttgatgattaaaagtgaaaaaatttatatattgtgaaagatgttgatatgaagttgtaatgg 6576444  T
Q  232 ttatatttgatgat 245  Q
    ||||||||||||||    
T  6576443 ttatatttgatgat 6576430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 22501195 - 22501147
Alignment:
Q  189 atatttatatattatgaaagacgttgatatgaagttgtaattgttatat 237  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  22501195 atatttatataatgtgaaagacgttgatatgaagttgtaattgttatat 22501147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 22509129 - 22509081
Alignment:
Q  189 atatttatatattatgaaagacgttgatatgaagttgtaattgttatat 237  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  22509129 atatttatataatgtgaaagacgttgatatgaagttgtaattgttatat 22509081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 24883713 - 24883657
Alignment:
Q  189 atatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  24883713 atatttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 24883657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 24436321 - 24436247
Alignment:
Q  170 ttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||||||||  ||||||||||| ||||||| ||||||||||| ||||||| |||| ||| ||||||    
T  24436321 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaaattgtaatggttacattggatgat 24436247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 3e-48; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 132 - 245
Target Start/End: Original strand, 12328538 - 12328651
Alignment:
Q  132 gagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattg 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||    
T  12328538 gagaggatgaataagatgattaatattgatgatttactttgatgattaaatttgaaaatatttatatattgtgaaagacgttgatatgaagatgtaattg 12328637  T
Q  232 ttatatttgatgat 245  Q
    |||||| |||||||    
T  12328638 ttatatatgatgat 12328651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 143 - 245
Target Start/End: Complemental strand, 8885555 - 8885453
Alignment:
Q  143 taagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgat 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| ||||    
T  8885555 taagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgtaatatatgat 8885456  T
Q  243 gat 245  Q
    |||    
T  8885455 gat 8885453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 51274290 - 51274376
Alignment:
Q  151 ttaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  51274290 ttaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaattgttatat 51274376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 51326974 - 51326907
Alignment:
Q  170 ttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 237  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  51326974 ttgatgattaaatgtgaacatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 51326907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 28194543 - 28194627
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||||||||||    
T  28194543 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtatttgatgat 28194627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 43543137 - 43543069
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  43543137 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 43543069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 43697578 - 43697470
Alignment:
Q  130 cagagaggatgaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaa 228  Q
    |||||||||||| |||||||||| ||||||| |||||||  |||||||||||||||||||| || |||||| | ||||||  ||||||||| ||||| ||    
T  43697578 cagagaggatgattaagatgatttaatattgttgatttaagttgatgattaaatgtgaaaagatctatatagtgtgaaagttgttgatatggagttgcaa 43697479  T
Q  229 ttgttatat 237  Q
     ||||||||    
T  43697478 atgttatat 43697470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 43697400 - 43697316
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||||||||||||||| ||||| | |||| ||||||| ||||||| | ||||||||||||||||| ||| |||||||||||    
T  43697400 atgatttactttgatgattaa-tgtgagattattgatatattgtgaaagatgctgatatgaagttgtaatggttttatttgatgat 43697316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 28194365 - 28194473
Alignment:
Q  130 cagagaggatgaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaa 228  Q
    |||||| ||||| || ||||||| ||||||| |||||||| |||||||||||||||||||| || |||||| | ||||||  ||||||||| ||||| ||    
T  28194365 cagagaagatgattaggatgatttaatattgttgatttacgttgatgattaaatgtgaaaaaatctatataatgtgaaagttgttgatatgtagttgcaa 28194464  T
Q  229 ttgttatat 237  Q
     ||||||||    
T  28194465 atgttatat 28194473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 46382652 - 46382733
Alignment:
Q  161 tgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||||||||| ||||| |||||||||||  | ||||||| ||||||||||||||||||| ||| |||| ||||||    
T  46382652 tgatttactttgatgattaa-tgtgagaatatttatat--tgtgaaagatgttgatatgaagttgtaatggttttattagatgat 46382733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 51326998 - 51326966
Alignment:
Q  133 agaggatgaataagatgattaatattgatgatt 165  Q
    |||||||||||||||||||||||||||||||||    
T  51326998 agaggatgaataagatgattaatattgatgatt 51326966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 48301121 - 48301078
Alignment:
Q  191 atttatatattatgaaagacgttgatatgaagttgtaattgtta 234  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||||    
T  48301121 atttatatattgtgaaagatgttgatatgaagttgtaatggtta 48301078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 4786 - 4674
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  4786 cagagaggatgaataagatgattaataatgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 4687  T
Q  230 tgttatatttgat 242  Q
    |||||||| ||||    
T  4686 tgttatatatgat 4674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 368 - 256
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  368 cagagaggatgaataagatgattaataatgatgatttactttgatgattatatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 269  T
Q  230 tgttatatttgat 242  Q
    |||||||| ||||    
T  268 tgttatatatgat 256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 6359 - 6474
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  6359 cagagaggatgaataagatgattaataataatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 6458  T
Q  230 tgttatatttgatgat 245  Q
    |||||||| |||||||    
T  6459 tgttatatatgatgat 6474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 14511 - 14404
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||    
T  14511 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgtaat 14412  T
Q  230 tgttatat 237  Q
    ||||||||    
T  14411 tgttatat 14404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 4e-47; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 20734128 - 20734243
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  20734128 cagagaggatgaataaaatgatttatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 20734227  T
Q  230 tgttatatttgatgat 245  Q
    |||||||| |||||||    
T  20734228 tgttatatatgatgat 20734243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 34296953 - 34297065
Alignment:
Q  133 agaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgt 232  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  34296953 agaggatgaataagatgattaataatgatgatttactttgatgattagatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgt 34297052  T
Q  233 tatatttgatgat 245  Q
    ||||| |||||||    
T  34297053 tatatatgatgat 34297065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 22421123 - 22421023
Alignment:
Q  145 agatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatga 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||    
T  22421123 agatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatga 22421024  T
Q  245 t 245  Q
    |    
T  22421023 t 22421023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 143 - 245
Target Start/End: Complemental strand, 2201277 - 2201175
Alignment:
Q  143 taagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgat 242  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  2201277 taagatgattaatattgatgatttactttgatgattaaatatgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgat 2201178  T
Q  243 gat 245  Q
    |||    
T  2201177 gat 2201175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 130 - 230
Target Start/End: Complemental strand, 27851373 - 27851273
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  27851373 cagagaggatgaataagatgatttatattgatgatttaccttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 27851274  T
Q  230 t 230  Q
    |    
T  27851273 t 27851273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 164 - 245
Target Start/End: Complemental strand, 19399895 - 19399814
Alignment:
Q  164 tttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||    
T  19399895 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaatggttatatttgatgat 19399814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 25956715 - 25956799
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||| | ||||||||||||||||| ||| |||||||||||    
T  25956715 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgat 25956799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 25956537 - 25956645
Alignment:
Q  130 cagagaggatgaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaa 228  Q
    |||||||||||| |||||||||| ||||||| |||||||| |||||||||||||||||||| || |||||| | ||||||  ||||||||| ||||| ||    
T  25956537 cagagaggatgattaagatgatttaatattgttgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatggagttgcaa 25956636  T
Q  229 ttgttatat 237  Q
     ||||||||    
T  25956637 atgttatat 25956645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 245
Target Start/End: Complemental strand, 18927977 - 18927880
Alignment:
Q  147 atgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||| |||  ||||||  |||||||||||||||||||  ||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  18927977 atgattaatgttgtggatttaagttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 18927880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 245
Target Start/End: Original strand, 31630622 - 31630705
Alignment:
Q  161 tgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||||| |||| ||| |||| ||||||    
T  31630622 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttataatggttgtattagatgat 31630705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 27851195 - 27851111
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||||| |||| ||||| |||||||||||||| ||||||| | ||||||||||||||| | ||| |||||||||||    
T  27851195 atgatttactttgatgcttaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgat 27851111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 245
Target Start/End: Complemental strand, 18708746 - 18708704
Alignment:
Q  203 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  18708746 tgaaagatgttgatatgaagttgtaatggttatattggatgat 18708704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 23151072 - 23151114
Alignment:
Q  203 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  23151072 tgaaagatgttgatatgaagttgtaatggttatattggatgat 23151114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 27322224 - 27322266
Alignment:
Q  203 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  27322224 tgaaagatgttgatatgaagttgtaatggttatattggatgat 27322266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 28708754 - 28708678
Alignment:
Q  170 ttgatgattaaatgtga-aaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||||   ||| ||||||||||| ||||||| | | ||| ||||||||||| |||||||| ||||||    
T  28708754 ttgatgattaaatgtacgaaagatttatatattgtgaaagatgctcataagaagttgtaatggttatattggatgat 28708678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 143 - 245
Target Start/End: Complemental strand, 11053 - 10951
Alignment:
Q  143 taagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgat 242  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||| ||||    
T  11053 taagatgattaatgttgatgatttactatgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaatttttaattgttatatatgat 10954  T
Q  243 gat 245  Q
    |||    
T  10953 gat 10951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 159 - 245
Target Start/End: Original strand, 6769 - 6855
Alignment:
Q  159 gatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||    
T  6769 gatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatggagttgtaatgattatatttgatgat 6855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 15419 - 15523
Alignment:
Q  141 aataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttg 240  Q
    ||||||||||||||| ||| |||||||  |||||||||||||||||||||||||||||||| ||||| | |||||||||||||||  ||||||||||| |    
T  15419 aataagatgattaatgttgttgatttaagttgatgattaaatgtgaaaatatttatatattgtgaaaaatgttgatatgaagttgcgattgttatattcg 15518  T
Q  241 atgat 245  Q
    |||||    
T  15519 atgat 15523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 24477 - 24581
Alignment:
Q  141 aataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttg 240  Q
    ||||||||||||||| ||| |||||||  |||||||||||||||||||||||||||||||| ||||| | |||||||||||||||  ||||||||||| |    
T  24477 aataagatgattaatgttgttgatttaagttgatgattaaatgtgaaaatatttatatattgtgaaaaatgttgatatgaagttgcgattgttatattcg 24576  T
Q  241 atgat 245  Q
    |||||    
T  24577 atgat 24581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 59295 - 59401
Alignment:
Q  138 atgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatat 237  Q
    |||||||||||||||||| |||  ||||||  |||||||||||||||||||  ||||||||||| ||||||| |||||||||||||||||||||||||||    
T  59295 atgaataagatgattaatgttgtggatttaagttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaattgttatat 59393  T
Q  238 ttgatgat 245  Q
    | ||||||    
T  59394 tggatgat 59401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 36142 - 36226
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  36142 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttatattagatgat 36226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 85275 - 85191
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||||||||||    
T  85275 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatagttgtatttgatgat 85191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 130 - 245
Target Start/End: Complemental strand, 3234 - 3120
Alignment:
Q  130 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||| |||||||||||||||||| |||  ||||||  |||||||||||||||| ||| ||||||||||  ||||| | |||||||||||||||||||    
T  3234 cagagagtatgaataagatgattaatgttgtggatttaagttgatgattaaatgtg-aaagatttatatatcgtgaaaaatgttgatatgaagttgtaat 3136  T
Q  230 tgttatatttgatgat 245  Q
     |||||||| ||||||    
T  3135 ggttatattggatgat 3120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 54; Significance: 5e-22; HSPs: 4)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 43878 - 43962
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||| | ||||||||||||||||| ||| |||||||||||    
T  43878 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgat 43962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 43700 - 43808
Alignment:
Q  130 cagagaggatgaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaa 228  Q
    |||||||||||| |||||||||| ||||||| |||||||| |||||||||||||||||||| || |||||| | ||||||  ||||||||| ||||| ||    
T  43700 cagagaggatgattaagatgatttaatattgttgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatggagttgcaa 43799  T
Q  229 ttgttatat 237  Q
     ||||||||    
T  43800 atgttatat 43808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 47620 - 47728
Alignment:
Q  130 cagagaggatgaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaa 228  Q
    |||||||||||| |||||||||| ||||||| |||||||| |||||||||||||||||||| || |||||| | ||||||  ||||||||| ||||| ||    
T  47620 cagagaggatgattaagatgatttaatattgttgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgtagttgcaa 47719  T
Q  229 ttgttatat 237  Q
     ||||||||    
T  47720 atgttatat 47728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 47798 - 47837
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatat 200  Q
    ||||||||||||||||||| ||||||| |||||||||||||    
T  47798 atgatttactttgatgatt-aatgtgagaatatttatatat 47837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 174 - 245
Target Start/End: Complemental strand, 611 - 540
Alignment:
Q  174 tgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||| || |||||||||||| |||||||    
T  611 tgattaaatgagaaaatatttatatattgtgaaagacgttgatatgaaattataattgttatatatgatgat 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 363032 - 362964
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 229  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  363032 atgatttactttgatgattaa-tgtgagaatatttatatattttgaaagatgttgatatgaagttgtaat 362964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 3063 - 2988
Alignment:
Q  169 tttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||| |||||||||||    
T  3063 tttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtatttgatgat 2988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 3136 - 3066
Alignment:
Q  130 cagagaggatgaataagatgatt-aatattgatgatttactttgatgattaaatgtgaaaatatttatata 199  Q
    |||||||||||| |||||||||| ||||||| |||||||| |||||||||||||||||||| || ||||||    
T  3136 cagagaggatgattaagatgatttaatattgttgatttacgttgatgattaaatgtgaaaagatctatata 3066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 245
Target Start/End: Complemental strand, 959 - 861
Alignment:
Q  146 gatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||| |||  ||||||  |||||||||||||||||||  ||| ||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  959 gatgattaatgttgtggatttaagttgatgattaaatgtgaaag-attaatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgat 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 245
Target Start/End: Complemental strand, 77042 - 76946
Alignment:
Q  147 atgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||| |||  ||||||  |||||||||||||||||||||  ||||||||| ||||||| || |||||||||||||||| |||||||| ||||||    
T  77042 atgattaatgttgtggatttaagttgatgattaaatgtgaaaat--ttatatattgtgaaagatgtggatatgaagttgtaatggttatattggatgat 76946  T

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Target: scaffold0513 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 10963 - 11047
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||||||||||||| | ||||| |||||||||||||| | ||||| ||||||||||||||||||| ||| |||| ||||||    
T  10963 atgatttactttgatgattta-tgtgagaatatttatatattgtaaaagatgttgatatgaagttgtaatggttgtattagatgat 11047  T

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Target: scaffold0802 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 245
Target Start/End: Original strand, 5455 - 5552
Alignment:
Q  147 atgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||| |||  ||||||  |||||||||||||||||||  ||||||||||| ||||||  |||||||||||||||||||  ||||||| ||||||    
T  5455 atgattaatgttgtggatttaagttgatgattaaatgtgaaag-atttatatattgtgaaaggtgttgatatgaagttgtaatgtttatattggatgat 5552  T

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Target: scaffold0075 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 8379 - 8462
Alignment:
Q  160 atgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||||||||||||||||| || || |||||| ||||||| |||| || | |||||||||||||||||  || |||||||||||    
T  8379 atgatttactttgatgattaa-tgagagaatatt-atatattgtgaatgatgatgatatgaagttgtaatgattgtatttgatgat 8462  T

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Target: scaffold0384 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 8192 - 8234
Alignment:
Q  203 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  8192 tgaaagatgttgatatgaagttgtaatggttatattggatgat 8234  T

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Target: scaffold0375 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 9108 - 9150
Alignment:
Q  203 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  9108 tgaaagatgttgatatgaagttgtaatggttatattggatgat 9150  T

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Target: scaffold0134 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 10032 - 10074
Alignment:
Q  203 tgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||    
T  10032 tgaaagatgttgatatgaagttgtaatggttatattggatgat 10074  T

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Target: scaffold0679 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 2449 - 2525
Alignment:
Q  170 ttgatgattaaatgtga-aaatatttatatattatgaaagacgttgatatgaagttgtaattgttatatttgatgat 245  Q
    |||||||||||||||   ||| ||||||||||| ||||||| | | ||| ||||||||||| |||||||| ||||||    
T  2449 ttgatgattaaatgtacgaaagatttatatattgtgaaagatgctcataagaagttgtaatggttatattggatgat 2525  T

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