View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0914_high_16 (Length: 457)
Name: NF0914_high_16
Description: NF0914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0914_high_16 |
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Alignment Details
Target: chr2 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 1 - 392
Target Start/End: Original strand, 34098100 - 34098508
Alignment:
| Q |
1 |
ctagattagaatggttatatgtcaaagagaatcactaacctcaccttagaatgagattaatttatgtatagcttacaaactattataattcagactcaaa |
100 |
Q |
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| T |
34098100 |
ctagattagaatggttatatgtcaaagagattcactaacctcaccttagaatgagattaatttatgtatagcttacaaactattataattcagactcaaa |
34098199 |
T |
|
| Q |
101 |
tctaagttattaatatcacactaactggtttcacatgcacattttctaatcggggtttggagtaccagatag-------------------aaagggaag |
181 |
Q |
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| T |
34098200 |
tctaagttattaatatcacactaattggtttcacatgcacattttctaatgggg--ttggagtactagatagcttttgcttttactcaatgaaagggaag |
34098297 |
T |
|
| Q |
182 |
ttaccaaatggcttgttgttgatttggcacacactcttgtgggtaatttgaaaggctagaaatgctgtaatttttggaacaaaacatccttgtcttggac |
281 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34098298 |
ttaccaaatggctggttgttgatttggcacacactcttgtgggtaatttgaaagactagaaatgctgtaatttttggaacaaaacatccttgtcttggac |
34098397 |
T |
|
| Q |
282 |
atggttcttgaggagaaaattgagatatccttgtttatttatgaatggaattctaaccccttagaatgtattgggattattttggtagttagagcactac |
381 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34098398 |
atggttcttgaggagaaaattgagatatccttgtttatttatgaatggaatgctaaccccttagaatgtattgggattattttggtagttagagcactac |
34098497 |
T |
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| Q |
382 |
ttatacttaat |
392 |
Q |
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||||||||||| |
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| T |
34098498 |
ttatacttaat |
34098508 |
T |
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