View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0914_high_48 (Length: 268)
Name: NF0914_high_48
Description: NF0914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0914_high_48 |
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Alignment Details
Target: chr6 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 40 - 208
Target Start/End: Complemental strand, 28751216 - 28751048
Alignment:
| Q |
40 |
catcctttggtcacactctcctttttatggccaacacaggtaaggccaccatcagtttccatttatgaattctttctcttcaatgcattgatttttagca |
139 |
Q |
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| T |
28751216 |
catcctttggtcacactctcctttttatggccaacacaggtaaggccaccatcagtttccatttatgaattctttctcttcaatgcattgatttttagca |
28751117 |
T |
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| Q |
140 |
cgtcaaatgtgaactttcatttccatttgtgattttgagtattgtttggtttcaaaattttattttaaa |
208 |
Q |
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| T |
28751116 |
cgtcaaatgtgaactttcatttccatttgtgattttgagtattgtttggtttcaaaattttattttaaa |
28751048 |
T |
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