View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0914_high_53 (Length: 258)
Name: NF0914_high_53
Description: NF0914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0914_high_53 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 30 - 258
Target Start/End: Original strand, 23523737 - 23523965
Alignment:
| Q |
30 |
gaaatgaaacattgtttctaaactcaaagagttgctatatattccatttatttttctattataagaaaaaatcatagtgtgaaatatgaaagaatttcac |
129 |
Q |
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| T |
23523737 |
gaaatgaaacattgtttctaaactcaaagagttgttatatattccatttatttttctattataagaaaaaatcatagtgtgaaatatgaaagaatttcac |
23523836 |
T |
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| Q |
130 |
acttctattttcagtcatttttgttctcagatccgttcaagagcattggatttgaatctttattatttcatttttacgcgaaatgttagtaacttaatga |
229 |
Q |
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||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
23523837 |
acttctattttcaatcatttttgttctcagatccattcaagagcattggatttgaatctttattatttcatttttatgcgaaatgttagtaacttaatga |
23523936 |
T |
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| Q |
230 |
tcatattagttttcagtatttgaactctg |
258 |
Q |
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|||||||||||||||| |||||||||||| |
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| T |
23523937 |
tcatattagttttcaggatttgaactctg |
23523965 |
T |
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