View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0914_high_54 (Length: 258)

Name: NF0914_high_54
Description: NF0914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0914_high_54
NF0914_high_54
[»] chr3 (21 HSPs)
chr3 (29-255)||(42848066-42848292)
chr3 (153-255)||(47948392-47948494)
chr3 (153-255)||(35171191-35171293)
chr3 (153-255)||(40650375-40650477)
chr3 (174-255)||(31309183-31309264)
chr3 (167-255)||(46959856-46959944)
chr3 (157-255)||(42067882-42067981)
chr3 (157-255)||(44365913-44366011)
chr3 (157-255)||(29786537-29786636)
chr3 (153-255)||(378603-378704)
chr3 (157-255)||(876226-876324)
chr3 (157-255)||(42363932-42364030)
chr3 (157-255)||(38785086-38785184)
chr3 (157-255)||(11140550-11140647)
chr3 (157-231)||(29347315-29347389)
chr3 (157-255)||(44670263-44670360)
chr3 (157-228)||(39629952-39630023)
chr3 (157-255)||(45636392-45636491)
chr3 (157-214)||(37492241-37492298)
chr3 (215-255)||(4660059-4660099)
chr3 (153-232)||(52162710-52162789)
[»] chr1 (27 HSPs)
chr1 (153-255)||(18642173-18642275)
chr1 (153-255)||(39971269-39971371)
chr1 (153-255)||(45423919-45424021)
chr1 (153-255)||(23459549-23459651)
chr1 (153-255)||(39190563-39190665)
chr1 (154-255)||(45673621-45673722)
chr1 (153-255)||(46770731-46770833)
chr1 (156-255)||(51520118-51520217)
chr1 (157-255)||(8461531-8461629)
chr1 (157-255)||(37499047-37499144)
chr1 (153-255)||(38262134-38262235)
chr1 (157-255)||(51985239-51985337)
chr1 (170-255)||(43306837-43306921)
chr1 (174-255)||(50905883-50905964)
chr1 (157-255)||(23057004-23057103)
chr1 (157-255)||(23061305-23061404)
chr1 (157-255)||(35305455-35305554)
chr1 (176-255)||(6520009-6520089)
chr1 (157-255)||(921846-921944)
chr1 (167-255)||(51369621-51369710)
chr1 (167-255)||(28494075-28494162)
chr1 (157-255)||(5956530-5956629)
chr1 (157-252)||(26102477-26102572)
chr1 (176-255)||(52303317-52303396)
chr1 (196-255)||(29106408-29106466)
chr1 (209-255)||(16482880-16482926)
chr1 (184-232)||(24381647-24381695)
[»] chr7 (13 HSPs)
chr7 (153-255)||(30863097-30863199)
chr7 (153-255)||(38129385-38129487)
chr7 (153-255)||(30623720-30623822)
chr7 (167-255)||(1691007-1691095)
chr7 (157-255)||(41913100-41913197)
chr7 (157-255)||(42711234-42711331)
chr7 (183-255)||(3910234-3910307)
chr7 (157-233)||(27956611-27956687)
chr7 (157-255)||(28327370-28327469)
chr7 (157-255)||(40942180-40942278)
chr7 (157-255)||(41381786-41381885)
chr7 (159-255)||(21699298-21699394)
chr7 (157-226)||(45461660-45461729)
[»] chr6 (11 HSPs)
chr6 (153-255)||(4110859-4110961)
chr6 (153-255)||(13390692-13390794)
chr6 (153-255)||(1096521-1096622)
chr6 (153-255)||(26358552-26358654)
chr6 (167-255)||(8401428-8401517)
chr6 (157-250)||(32833778-32833871)
chr6 (167-255)||(24213216-24213304)
chr6 (157-255)||(2259209-2259306)
chr6 (157-255)||(17545908-17546005)
chr6 (172-255)||(24487304-24487388)
chr6 (157-235)||(6848839-6848916)
[»] chr5 (21 HSPs)
chr5 (153-255)||(3056700-3056802)
chr5 (153-255)||(36338845-36338947)
chr5 (153-255)||(1661692-1661794)
chr5 (153-255)||(2141546-2141648)
chr5 (153-255)||(18228460-18228562)
chr5 (157-255)||(32467347-32467445)
chr5 (153-255)||(2414228-2414330)
chr5 (153-255)||(9535171-9535273)
chr5 (157-255)||(6561130-6561228)
chr5 (157-255)||(34302952-34303050)
chr5 (157-251)||(43237359-43237453)
chr5 (157-255)||(13410845-13410944)
chr5 (167-255)||(6532884-6532972)
chr5 (172-255)||(21605953-21606037)
chr5 (167-255)||(24098174-24098262)
chr5 (157-255)||(42917422-42917520)
chr5 (188-255)||(2029657-2029724)
chr5 (184-255)||(6318317-6318388)
chr5 (188-255)||(6113808-6113876)
chr5 (176-255)||(22780817-22780896)
chr5 (157-232)||(13091240-13091315)
[»] chr4 (23 HSPs)
chr4 (153-255)||(34280224-34280326)
chr4 (153-255)||(33075979-33076082)
chr4 (153-255)||(30539864-30539966)
chr4 (152-255)||(46042005-46042108)
chr4 (157-255)||(47302284-47302382)
chr4 (153-252)||(52589379-52589478)
chr4 (176-255)||(3716629-3716708)
chr4 (152-255)||(27539221-27539324)
chr4 (153-255)||(43137371-43137473)
chr4 (157-255)||(48578911-48579008)
chr4 (157-255)||(37518969-37519067)
chr4 (157-255)||(37523185-37523283)
chr4 (157-255)||(41759663-41759760)
chr4 (157-255)||(52592097-52592195)
chr4 (167-255)||(55722782-55722869)
chr4 (157-255)||(30343131-30343230)
chr4 (157-255)||(51435816-51435915)
chr4 (157-255)||(38836154-38836252)
chr4 (157-233)||(11109600-11109676)
chr4 (157-255)||(37855425-37855524)
chr4 (157-255)||(53388850-53388948)
chr4 (188-255)||(14803016-14803084)
chr4 (157-255)||(28037989-28038087)
[»] chr2 (16 HSPs)
chr2 (153-255)||(42427568-42427670)
chr2 (157-255)||(3383195-3383294)
chr2 (157-255)||(14532828-14532926)
chr2 (158-255)||(15771314-15771411)
chr2 (166-255)||(33423047-33423136)
chr2 (157-255)||(4673605-4673704)
chr2 (174-255)||(6884465-6884547)
chr2 (167-255)||(11813206-11813295)
chr2 (157-252)||(3810454-3810549)
chr2 (157-255)||(37083514-37083613)
chr2 (185-255)||(59222-59292)
chr2 (157-255)||(34665875-34665972)
chr2 (157-255)||(1353811-1353908)
chr2 (157-255)||(5389206-5389303)
chr2 (157-255)||(11227932-11228029)
chr2 (157-255)||(38963071-38963170)
[»] chr8 (22 HSPs)
chr8 (153-255)||(14498304-14498406)
chr8 (154-255)||(38502495-38502595)
chr8 (159-255)||(10280864-10280960)
chr8 (158-255)||(29229181-29229279)
chr8 (157-255)||(15725894-15725992)
chr8 (153-255)||(36002663-36002765)
chr8 (157-252)||(23274930-23275026)
chr8 (157-255)||(29459938-29460037)
chr8 (157-255)||(34332416-34332513)
chr8 (157-255)||(946273-946373)
chr8 (157-255)||(37511392-37511491)
chr8 (157-255)||(44935203-44935300)
chr8 (170-255)||(12162957-12163043)
chr8 (170-255)||(12407385-12407471)
chr8 (157-255)||(28090495-28090592)
chr8 (157-255)||(29773749-29773846)
chr8 (157-255)||(37161812-37161916)
chr8 (177-252)||(23275097-23275173)
chr8 (157-255)||(39171002-39171102)
chr8 (157-233)||(23286892-23286967)
chr8 (176-255)||(39171105-39171183)
chr8 (183-238)||(29265619-29265674)
[»] scaffold0077 (1 HSPs)
scaffold0077 (157-255)||(48314-48411)
[»] scaffold0005 (1 HSPs)
scaffold0005 (188-255)||(36643-36711)
[»] scaffold0283 (1 HSPs)
scaffold0283 (157-255)||(6543-6640)


Alignment Details
Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 29 - 255
Target Start/End: Original strand, 42848066 - 42848292
Alignment:
Q  29 acaagtgtggtggatgtggtactgaccttcaaggtgaaaaatcttttctgtttttgtataccattgtactcttcaatattaccctgtttcaaaattatgc 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42848066 acaagtgtggtggatgtggtactgaccttcaaggtgaaaaatcttttctgtttttgtataccattgtactcttcaatattaccctgtttcaaaattatgc 42848165  T
Q  129 agnnnnnnnnnnnnnnnnnntctgggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcat 228  Q
    ||                  ||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||    
T  42848166 agaaaaaataaaataaaaaatctgggggacttctatgatacacccgtaaatgacggtgtaccggtactcccgcttacaatttttataaattaactatcat 42848265  T
Q  229 tttttatgaataaaataggtgtttgtt 255  Q
    |||||||||| ||||||||||||||||    
T  42848266 tttttatgaagaaaataggtgtttgtt 42848292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 255
Target Start/End: Original strand, 47948392 - 47948494
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  47948392 ggggacttctatggtacacccgtaaatgacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 47948491  T
Q  253 gtt 255  Q
    |||    
T  47948492 gtt 47948494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 153 - 255
Target Start/End: Original strand, 35171191 - 35171293
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  35171191 ggggatttctatggtacacccgtaaattacggtgtaccggtactctcgcttataatttttataaattaactatcattttttatgaagaaaataggtgttt 35171290  T
Q  253 gtt 255  Q
    |||    
T  35171291 gtt 35171293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 40650477 - 40650375
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  40650477 ggggacttctatggtacactcgtaaattacggtgtatcggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 40650378  T
Q  253 gtt 255  Q
    |||    
T  40650377 gtt 40650375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 31309264 - 31309183
Alignment:
Q  174 gtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  31309264 gtaaattacggtgtaccggtactctcggttacaatttttataaattaactataattttttatgaagaaaataggtgtttgtt 31309183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 167 - 255
Target Start/End: Complemental strand, 46959944 - 46959856
Alignment:
Q  167 tacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    |||||| | ||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  46959944 tacacctgcaaattacggtgtatcggtactctcgcttacaacttttataaattaactatcattttttatgaagaaaataggtgtttgtt 46959856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 42067981 - 42067882
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    ||||||| | |||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  42067981 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgtt 42067882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 44366011 - 44365913
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaataaaataggtgtttgtt 255  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||  |||||||||||||||    
T  44366011 acttctatggtacacccgtaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcatttttttatgaaagaaataggtgtttgtt 44365913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 29786537 - 29786636
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    ||||||| | |||||| | |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||| |||||||||    
T  29786537 acttctacggtacacctgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataagtgtttgtt 29786636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 153 - 255
Target Start/End: Original strand, 378603 - 378704
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| |||||||||||||||| ||||||||||||  ||  ||  ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  378603 ggggacttctatggtacacccgtaaattacagtgtaccggtaccatcacttt-aatttttataaattaactatcattttttatgaagaaaataagtgttt 378701  T
Q  253 gtt 255  Q
    |||    
T  378702 gtt 378704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 876226 - 876324
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||||| |||||||| ||||| |||||||||| ||| ||||||||||| ||||||||||||||||||||| ||||||| ||||||||    
T  876226 acttctacggtacacccgcaaattacgatgtactggtactctcgcttataatttttataatttaactatcattttttatgaagaaaatagttgtttgtt 876324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 42363932 - 42364030
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||| | ||||||||||||| ||||||||| | ||||||||||||||| |||||||| |||||||||||| ||||||||||||||||    
T  42363932 acttctacggtacacctgcaaattacggtgtatcggtactctagcttacaatttttataatttaactataattttttatgaaaaaaataggtgtttgtt 42364030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 38785086 - 38785184
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaa-tttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||| | ||||||||||||||||||||||||| |||||| |||||||||||||||||| | |||||||||| ||||||||||||||||    
T  38785086 acttctacggtacacctgcaaattacggtgtaccggtactctcgcttacaattttttataaattaactat-aatttttatgaagaaaataggtgtttgtt 38785184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 11140647 - 11140550
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||||| |||||| |||||||||||||||||| |||| |||||||||||  |||||||||||||||| ||  |||||||||||||||    
T  11140647 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaacaaactatcattttttataaaagaaataggtgtttgtt 11140550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 29347315 - 29347389
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcatttt 231  Q
    ||||||| | |||||||| ||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29347315 acttctacggtacacccgcaaattgcagtgtaccggtactctcgcttacaatttttataaattaactatcatttt 29347389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 44670263 - 44670360
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||| |||||||||| ||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||  ||||| |||||||||    
T  44670263 acttctacggtacatccgtaaattaaggtgtgccggtactttcgcttaca-tttttataaattaactatcattttttatgaaagaaataagtgtttgtt 44670360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 39629952 - 39630023
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcat 228  Q
    ||||||| | |||| ||| |||||| | |||||||||||| ||| |||||||||||||||||||||||||||    
T  39629952 acttctacggtacatccgcaaattaagatgtaccggtactatcgcttacaatttttataaattaactatcat 39630023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 45636491 - 45636392
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    ||||||| | ||||| |||||||||   | ||| ||||| |||| ||| ||||||||||||||||||||||||||||||| || ||||||||| ||||||    
T  45636491 acttctacggtacactcgtaaattaaaatatactggtacactcgcttataatttttataaattaactatcattttttatgaaagaaaataggtatttgtt 45636392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 37492298 - 37492241
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttat 214  Q
    ||||||| | |||| ||| ||||||||||||||||||||||||| ||| |||||||||    
T  37492298 acttctacggtacatccgcaaattacggtgtaccggtactctcgcttataatttttat 37492241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 4660099 - 4660059
Alignment:
Q  215 aaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    |||||||||||||||||||||||| ||||||| ||||||||    
T  4660099 aaattaactatcattttttatgaaaaaaatagctgtttgtt 4660059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 52162789 - 52162710
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttt 232  Q
    ||||||||||| ||||||| |||||||| | ||||||||||||||| |||| | |  | ||||||||||| |||| ||||    
T  52162789 ggggacttctacgatacactcgtaaattgcagtgtaccggtactcttgtttcctaaatctataaattaacgatcaatttt 52162710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 3e-44; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 18642275 - 18642173
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18642275 ggggacttctatggtacacccgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaaaaaataggtgttt 18642176  T
Q  253 gtt 255  Q
    |||    
T  18642175 gtt 18642173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 255
Target Start/End: Original strand, 39971269 - 39971371
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  39971269 ggggacttctatggtacacccgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggttttt 39971368  T
Q  253 gtt 255  Q
    |||    
T  39971369 gtt 39971371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 45424021 - 45423919
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  45424021 ggggacttctatggtacacccgtaaattacgatgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 45423922  T
Q  253 gtt 255  Q
    |||    
T  45423921 gtt 45423919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 153 - 255
Target Start/End: Original strand, 23459549 - 23459651
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  23459549 ggggacttctatggtacacccgtaaattacggtgtaccagtactctcgcttataatttttataaattaactatcattttttatgaagaaaataggtgttt 23459648  T
Q  253 gtt 255  Q
    |||    
T  23459649 gtt 23459651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 153 - 255
Target Start/End: Original strand, 39190563 - 39190665
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  39190563 ggggacttctatggtacaccagtaaattacggtgtaccggtactctcgcttataatttttataaattaactatcattttttatgaagaaaataggtgttt 39190662  T
Q  253 gtt 255  Q
    |||    
T  39190663 gtt 39190665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 154 - 255
Target Start/End: Complemental strand, 45673722 - 45673621
Alignment:
Q  154 gggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttg 253  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  45673722 gggacttctatggtacatccgtaaattacggtgtaccggtactctcgcttacaatttttataagttaactatcattttttatgaagaaaataggtgtttg 45673623  T
Q  254 tt 255  Q
    ||    
T  45673622 tt 45673621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 153 - 255
Target Start/End: Original strand, 46770731 - 46770833
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  46770731 ggggatttctatggtacacccgtaaattacggtctaccggtactctcacttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 46770830  T
Q  253 gtt 255  Q
    |||    
T  46770831 gtt 46770833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 156 - 255
Target Start/End: Complemental strand, 51520217 - 51520118
Alignment:
Q  156 gacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    |||||||||| |||||||||||||||||| ||||||||||||||  || |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  51520217 gacttctatggtacacccgtaaattacggggtaccggtactctcactttcaatttttataaattaactatcattttttatgaagaaaataggtgtttgtt 51520118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 8461531 - 8461629
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||||| |||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  8461531 acttctatggtacacccgcaaattacggtgtaccggtactctcacttacaatttttataaattaactatcattttttatgaagaaaattggtgtttgtt 8461629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 37499144 - 37499047
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||||| |||||||| |||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  37499144 acttctatggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgtt 37499047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 255
Target Start/End: Original strand, 38262134 - 38262235
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||| ||||||| |||||||||| ||||||||||| || |||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  38262134 ggggatttctatggtacacccgtagattacggtgtatcg-tactctcgcttacaatttttataaattaattatcattttttatgaagaaaataggtgttt 38262232  T
Q  253 gtt 255  Q
    |||    
T  38262233 gtt 38262235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 51985337 - 51985239
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  51985337 acttctacggtacacctgcaaattacggtgtaccggtactctcgcttacaatttttataaattaactataattctttatgaagaaaataggtgtttgtt 51985239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 43306921 - 43306837
Alignment:
Q  170 acccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||| |||||||    
T  43306921 acccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactat-aatttttatgaagaaaataggcgtttgtt 43306837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 50905964 - 50905883
Alignment:
Q  174 gtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||| ||||||||||||||||    
T  50905964 gtaaattacggtgtaccggtactctcgcttacaatttttataaattaaatataattttttatgaagaaaataggtgtttgtt 50905883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 23057103 - 23057004
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    ||||||| | |||||||| |||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  23057103 acttctacggtacacccgcaaattaaggtgtaccggtcctctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtttgtt 23057004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 23061404 - 23061305
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    ||||||| | |||||||| |||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||||||||    
T  23061404 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaattatcattttttatgaaagaaaataggtgtttgtt 23061305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 35305554 - 35305455
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    ||||||| | ||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  35305554 acttctacggtacactcgtaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgtt 35305455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 176 - 255
Target Start/End: Original strand, 6520009 - 6520089
Alignment:
Q  176 aaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  6520009 aaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtttgtt 6520089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 921846 - 921944
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    ||||||||| |||||| | |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  921846 acttctatggtacacctgcaaattaaggtgtaccggtactctcgtt-acaatttttataaattaactatcattttttatgaaagaaaattggtgtttgtt 921944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 255
Target Start/End: Complemental strand, 51369710 - 51369621
Alignment:
Q  167 tacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    |||||| | |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||| || ||||||||||||||||    
T  51369710 tacacctgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactattattttttatgaaagaaaataggtgtttgtt 51369621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 167 - 255
Target Start/End: Complemental strand, 28494162 - 28494075
Alignment:
Q  167 tacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    |||||||| |||||| |||||||||||||||| | ||||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  28494162 tacacccgcaaattaaggtgtaccggtactcttgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgtt 28494075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 5956530 - 5956629
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    ||||||| | |||||||  |||||| | |||||||||||||||| ||| ||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  5956530 acttctacggtacacccacaaattaagctgtaccggtactctcgcttataatttttataaattaactatcattttttatgaaagaaaataggtgtttgtt 5956629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 26102477 - 26102572
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||| | ||||||  ||||||||||||||||| || |||| ||||| ||||||||||||||||||| |||||||||||| |||||||||||||    
T  26102477 acttctacggtacacctctaaattacggtgtaccgatattctcatttacgatttttataaattaactataattttttatgaagaaaataggtgttt 26102572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 176 - 255
Target Start/End: Complemental strand, 52303396 - 52303317
Alignment:
Q  176 aaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    |||||| |||||||||||||||||  ||||| ||||||||||||||||||||||||||||| || ||||||||||||||||    
T  52303396 aaattaaggtgtaccggtactctcacttaca-tttttataaattaactatcattttttatgaaagaaaataggtgtttgtt 52303317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 29106408 - 29106466
Alignment:
Q  196 tctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||| |||||||||||||||||||||||| |||||||||||| |||||| |||||||||    
T  29106408 tctcgcttacaatttttataaattaactat-attttttatgaagaaaatatgtgtttgtt 29106466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 16482926 - 16482880
Alignment:
Q  209 ttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||    
T  16482926 ttttataaattaactataattttttatgaagaaaataggtgtttgtt 16482880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 24381695 - 24381647
Alignment:
Q  184 gtgtaccggtactctcgtttacaatttttataaattaactatcattttt 232  Q
    ||||||||||||||||||||   | |||||||||||||| |||||||||    
T  24381695 gtgtaccggtactctcgtttcataattttataaattaacgatcattttt 24381647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 8e-42; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 30863199 - 30863097
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30863199 ggggacttctattgtacacccgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 30863100  T
Q  253 gtt 255  Q
    |||    
T  30863099 gtt 30863097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 153 - 255
Target Start/End: Original strand, 38129385 - 38129487
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  38129385 ggggacttctatggtacacccgtaaattacggtgtaccggtattcttgcttacaatttttataaattaactatcattttttatgaagaaaataagtgttt 38129484  T
Q  253 gtt 255  Q
    |||    
T  38129485 gtt 38129487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 255
Target Start/End: Original strand, 30623720 - 30623822
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| || |||||| ||||||    
T  30623720 ggggacttctatggtacacccataaattacggtgtaccgatactctcgcttacaatttttataaattaactatcattttttataaagaaaataagtgttt 30623819  T
Q  253 gtt 255  Q
    |||    
T  30623820 gtt 30623822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 167 - 255
Target Start/End: Original strand, 1691007 - 1691095
Alignment:
Q  167 tacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  1691007 tacacccgtaaattatggtataccggtactctcatttacaatttttttaaattaactatcattttttatgaagaaaataggtgtttgtt 1691095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 41913100 - 41913197
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||||| |||||||| |||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  41913100 acttctatggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgtt 41913197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 42711331 - 42711234
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||| ||| |||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  42711331 acttctacggtacatccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgtt 42711234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 3910307 - 3910234
Alignment:
Q  183 ggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  3910307 ggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtttgtt 3910234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 27956687 - 27956611
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcatttttt 233  Q
    ||||||||| |||||||| |||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  27956687 acttctatggtacacccgcaaattaaggtgtaccggtactctcgcttacaaattttataaattaactatcatttttt 27956611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 28327469 - 28327370
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    ||||||| | |||||||| |||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  28327469 acttctacggtacacccgcaaattaagctgtaccggtcctctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgtt 28327370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 40942278 - 40942180
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaataaaataggtgtttgtt 255  Q
    ||||||||| |||| |||||||||| | |||||||||||||||| |||| ||||||||||||||||||||| |||||||||||  |||||||||||||||    
T  40942278 acttctatggtacatccgtaaattaagatgtaccggtactctcgcttac-atttttataaattaactatcatttttttatgaaagaaataggtgtttgtt 40942180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 41381885 - 41381786
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    ||||||| | |||||||||||||||  ||| ||||||||| | | ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||    
T  41381885 acttctacggtacacccgtaaattaatgtgcaccggtacttttgcttacaatttttataaattaactatcattttttatgaaagaaaataggtctttgtt 41381786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 21699298 - 21699394
Alignment:
Q  159 ttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaataaaataggtgtttgtt 255  Q
    ||||||| ||||| || |||||| ||||||||| ||||||||||||| ||||||||||||||| ||||| |||||||||||  |||||||||||||||    
T  21699298 ttctatggtacactcgcaaattaaggtgtaccgatactctcgtttac-atttttataaattaattatcatttttttatgaaagaaataggtgtttgtt 21699394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 45461729 - 45461660
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatc 226  Q
    ||||||| | |||||| | ||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  45461729 acttctacggtacacctgcaaattacggtgtaccggtactctcgcttacaatttttataatttaactatc 45461660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 8e-42; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 4110961 - 4110859
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4110961 ggggacttctatggtacacccgtaaattacggtgtaccggttctctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 4110862  T
Q  253 gtt 255  Q
    |||    
T  4110861 gtt 4110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 13390794 - 13390692
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13390794 ggggacttctatggtacacctgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 13390695  T
Q  253 gtt 255  Q
    |||    
T  13390694 gtt 13390692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 1096622 - 1096521
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| | |||||||||  |||||||||||||    
T  1096622 ggggacttctatggtacacccgtaaattacggtgtaccggtactctcgcttataatttttataaattaactat-aatttttatgaggaaaataggtgttt 1096524  T
Q  253 gtt 255  Q
    |||    
T  1096523 gtt 1096521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 255
Target Start/End: Original strand, 26358552 - 26358654
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    |||||||| |||| |||| |||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  26358552 ggggacttttatggtacaaccgtaaattatggtgtaccagtactctcgcttataatttttataaattaactatcattttttatgaagaaaatacgtgttt 26358651  T
Q  253 gtt 255  Q
    |||    
T  26358652 gtt 26358654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 167 - 255
Target Start/End: Original strand, 8401428 - 8401517
Alignment:
Q  167 tacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaataaaataggtgtttgtt 255  Q
    |||||||| |||||||||||||||| |||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  8401428 tacacccgcaaattacggtgtaccgctactctcacttacaatttttataaattaactatcatttttttatgaagaaaataggtgtttgtt 8401517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 157 - 250
Target Start/End: Original strand, 32833778 - 32833871
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgt 250  Q
    ||||||| | |||| ||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  32833778 acttctacggtacatccgcaaattacggtgtactggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataagtgt 32833871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 167 - 255
Target Start/End: Complemental strand, 24213304 - 24213216
Alignment:
Q  167 tacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    |||||||| |||||||||| || ||||||| ||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24213304 tacacccgcaaattacggtatatcggtactttcacttacaatttttataaattaactatcattttttatgaagaaaataggtgtttgtt 24213216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 2259306 - 2259209
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||||| |||||| ||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  2259306 acttctacggtacacccgcaaattaaggtgtacaggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgtt 2259209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 17546005 - 17545908
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||||  |||||||| |||||| ||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  17546005 acttctatagtacacccgcaaattaaggtgtactggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgtt 17545908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 172 - 255
Target Start/End: Original strand, 24487304 - 24487388
Alignment:
Q  172 ccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    |||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| || ||||| ||||||||||    
T  24487304 ccgtaaattaaggtgtaccggtactctcgcttacaatttttataagttaactatcattttttatgaaagaaaattggtgtttgtt 24487388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 6848916 - 6848839
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttat 235  Q
    ||||||| | ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  6848916 acttctacggtacacccgtaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcattttttat 6848839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 8e-42; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 3056802 - 3056700
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3056802 ggggacttctatggtacactcgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 3056703  T
Q  253 gtt 255  Q
    |||    
T  3056702 gtt 3056700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 255
Target Start/End: Original strand, 36338845 - 36338947
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36338845 ggggacttctatggtacacccgtaaattacggtgtaccagtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 36338944  T
Q  253 gtt 255  Q
    |||    
T  36338945 gtt 36338947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 153 - 255
Target Start/End: Original strand, 1661692 - 1661794
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    |||||||| |||| |||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1661692 ggggacttatatggtacacctgtaaattacggtgtaccggtgctctcgcttacaatttttataaattaactatcattttttatgaaaaaaataggtgttt 1661791  T
Q  253 gtt 255  Q
    |||    
T  1661792 gtt 1661794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 2141648 - 2141546
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  2141648 ggggacttctatggtacacccataaattacggtgtaccgttactctcgcttacaatttttataaattaactatcattttttatgaagaaaataagtgttt 2141549  T
Q  253 gtt 255  Q
    |||    
T  2141548 gtt 2141546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 255
Target Start/End: Original strand, 18228460 - 18228562
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  18228460 ggggatttctatggtacacccgtaaattacggtctaccggtactctcacttacaatttttataaattaactatcattttttatgaagaaaatacgtgttt 18228559  T
Q  253 gtt 255  Q
    |||    
T  18228560 gtt 18228562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 32467445 - 32467347
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32467445 acttctacggtacacccgcaaattacggtgtaccggtactctcgcttgcaatttttataaattaactatcattttttatgaagaaaataggtgtttgtt 32467347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 2414330 - 2414228
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| |||| ||||||||||| ||||| ||||||||||  ||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  2414330 ggggacttctatggtacatccgtaaattacagtgtaacggtactctcacttacaatttttataaattaactatcattttttatgaagaaaataagtgttt 2414231  T
Q  253 gtt 255  Q
    |||    
T  2414230 gtt 2414228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 9535273 - 9535171
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| |||||||||||||||  ||||| ||||||||||  ||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  9535273 ggggacttctatggtacacccgtaaattaaagtgtaacggtactctcacttacaatttttataaattaactatcattttttatgaagaaaataagtgttt 9535174  T
Q  253 gtt 255  Q
    |||    
T  9535173 gtt 9535171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 6561228 - 6561130
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||| | ||||||||||||||||||| ||| | |||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  6561228 acttctacggtacacctgcaaattacggtgtaccggtattcttgcttacaatttttataaattaactataattttttatgaagaaaataggtgtttgtt 6561130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 34303050 - 34302952
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||| | ||||||||||||||||||||||||  ||| |||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  34303050 acttctacggtacacctgcaaattacggtgtaccggtactctcacttataatttttataaattaactataattttttatgaaaaaaataggtgtttgtt 34302952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 251
Target Start/End: Original strand, 43237359 - 43237453
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtt 251  Q
    ||||||||| |||||| | ||||||||||||| ||||||||||| |||||||||||||||||||| ||| |||||||||||| ||||||||||||    
T  43237359 acttctatggtacacctgcaaattacggtgtatcggtactctcgcttacaatttttataaattaattataattttttatgaagaaaataggtgtt 43237453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 13410944 - 13410845
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    ||||||| | |||| ||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  13410944 acttctacggtacatccgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgtt 13410845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 167 - 255
Target Start/End: Complemental strand, 6532972 - 6532884
Alignment:
Q  167 tacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    |||| ||| ||||||||||||| || |||||||| ||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||    
T  6532972 tacatccgcaaattacggtgtatcgatactctcgcttacaatttttataatttaactatcatgttttatgaagaaaataggtgtttgtt 6532884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 172 - 255
Target Start/End: Complemental strand, 21606037 - 21605953
Alignment:
Q  172 ccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    |||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| || ||||| ||||||||||    
T  21606037 ccgtaaattaaggtgtaccggtactctcgcttacaatttttataagttaactatcattttttatgaaagaaaattggtgtttgtt 21605953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 255
Target Start/End: Complemental strand, 24098262 - 24098174
Alignment:
Q  167 tacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    |||||| | |||||||||||||| |||||||||| ||||||||||||||||| || |||||||||||||||| |||||| || ||||||    
T  24098262 tacacctgcaaattacggtgtactggtactctcgcttacaatttttataaataaaatatcattttttatgaagaaaataagtctttgtt 24098174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 42917520 - 42917422
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcatt-ttttatgaataaaataggtgtttgtt 255  Q
    |||| |||| |||||||  |||||| |||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||  |||||||||||||||    
T  42917520 acttttatggtacacccacaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcatttttttatgaaagaaataggtgtttgtt 42917422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 2029724 - 2029657
Alignment:
Q  188 accggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    |||| |||||||| ||||||||||||||| |||||| |||||||||||||| ||||||||||||||||    
T  2029724 accgatactctcgcttacaatttttataatttaactgtcattttttatgaagaaaataggtgtttgtt 2029657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 6318317 - 6318388
Alignment:
Q  184 gtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||| ||||||||||| |||||||||||||||||||||||| |||||||| ||| ||||||||| ||||||    
T  6318317 gtgtagcggtactctcgcttacaatttttataaattaactataattttttacgaagaaaataggtatttgtt 6318388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 6113808 - 6113876
Alignment:
Q  188 accggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  6113808 accggtactctcgcttataatttttataaattaactatcattttttatgaaagaaaattggtgtttgtt 6113876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 255
Target Start/End: Complemental strand, 22780896 - 22780817
Alignment:
Q  176 aaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    |||||| | |||||||| ||||| ||||| ||  |||||||||||||||||||||||| |||| ||||||| ||||||||    
T  22780896 aaattaagatgtaccggcactcttgtttaaaaaatttataaattaactatcattttttgtgaaaaaaatagttgtttgtt 22780817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 13091315 - 13091240
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttt 232  Q
    ||||||| | ||||||||||||||| ||||||||||||||||   ||  ||  |||||||||||||||||||||||    
T  13091315 acttctacggtacacccgtaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcattttt 13091240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 8e-42; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 153 - 255
Target Start/End: Original strand, 34280224 - 34280326
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34280224 ggggacttctatggtacacccgtaaattgcggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 34280323  T
Q  253 gtt 255  Q
    |||    
T  34280324 gtt 34280326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 153 - 255
Target Start/End: Original strand, 33075979 - 33076082
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaataaaataggtgtt 251  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  33075979 ggggacttctatggtacacccgtaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcatttttttatgaagaaaataggtgtt 33076078  T
Q  252 tgtt 255  Q
    ||||    
T  33076079 tgtt 33076082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 30539966 - 30539864
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  30539966 ggggacttctatggtacacccgtaaattacggtgtactggtactctcgcttataatttttataaattaactatcattttttatgaaaaaaataggtgttt 30539867  T
Q  253 gtt 255  Q
    |||    
T  30539866 gtt 30539864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 152 - 255
Target Start/End: Complemental strand, 46042108 - 46042005
Alignment:
Q  152 gggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtt 251  Q
    |||||| ||||||| ||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  46042108 gggggatttctatggtacacccgtgaattacgatgtaccggtactctcgtttataatttttataaattaactatcattttttatgaagaaaataggtgtt 46042009  T
Q  252 tgtt 255  Q
    ||||    
T  46042008 tgtt 46042005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 47302382 - 47302284
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  47302382 acttctacggtacacccgtaaattacggtgtaccggtactctcgcttataatttttataaattaactatcattttttatgaagaaaataggtgtttgtt 47302284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 153 - 252
Target Start/End: Complemental strand, 52589478 - 52589379
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| ||||| ||||||||||||||||||| |||||| ||||| |||||||||||||||||||| |||||||||||| |||||||||||||    
T  52589478 ggggacttctatggtacactcgtaaattacggtgtaccgatactcttgtttataatttttataaattaactataattttttatgaagaaaataggtgttt 52589379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 176 - 255
Target Start/End: Complemental strand, 3716708 - 3716629
Alignment:
Q  176 aaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  3716708 aaattacggtgtaccggtactctcgcttacaatttttataaattaactataattttttatgaagaaaataggtgtttgtt 3716629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 255
Target Start/End: Complemental strand, 27539324 - 27539221
Alignment:
Q  152 gggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtt 251  Q
    |||||| ||||||| |||| |||||||||| |||||||||||||||| | ||| |||||||||||||||||||| |||||||||||| ||||||||||||    
T  27539324 gggggatttctatggtacatccgtaaattatggtgtaccggtactcttgcttataatttttataaattaactataattttttatgaagaaaataggtgtt 27539225  T
Q  252 tgtt 255  Q
    ||||    
T  27539224 tgtt 27539221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 255
Target Start/End: Original strand, 43137371 - 43137473
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| ||||||||| |||||||||||| ||||||||||  |||||||||| ||||||||||||||||||||| | || |||||||||||||    
T  43137371 ggggacttctatggtacacccgtgaattacggtgtatcggtactctcacttacaattttaataaattaactatcattttttgtaaagaaaataggtgttt 43137470  T
Q  253 gtt 255  Q
    |||    
T  43137471 gtt 43137473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 48578911 - 48579008
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | ||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  48578911 acttctacggtacacccgtaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgtt 48579008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 37518969 - 37519067
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||||||||||||| || || | ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  37518969 acttctacggtacacccgtaaattacagtatatcagtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataagtgtttgtt 37519067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 37523185 - 37523283
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||||||||||||| || || | ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  37523185 acttctacggtacacccgtaaattacagtatatcagtactctcgcttacaatttttataaattaactatcattttttatgaagaaaataagtgtttgtt 37523283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 41759663 - 41759760
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||||||||||||  ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  41759663 acttctacggtacacccgtaaattaaagtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgtt 41759760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 52592195 - 52592097
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||| |||||||||||||||||||||||||||||  ||||||||||||||| ||| |||||||||||||||| |||||| |||||||||    
T  52592195 acttctacggtacatccgtaaattacggtgtaccggtactctcgcatacaatttttataaagtaattatcattttttatgaagaaaataagtgtttgtt 52592097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 167 - 255
Target Start/End: Complemental strand, 55722869 - 55722782
Alignment:
Q  167 tacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    |||||||| |||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  55722869 tacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgtt 55722782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 30343230 - 30343131
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcatt-ttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||||| |||||||||| ||||| |||||||  |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  30343230 acttctacggtacacccgcaaattacggtttaccgctactctcacttacaatttttataaattaactatcatttttttatgaagaaaataggtgtttgtt 30343131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 51435816 - 51435915
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaataaaataggtgtttgtt 255  Q
    ||||||||| |||||||| |||||| |||||||||| |||||| |||||| ||||| |||||||||||||| |||||||||||  |||||||||||||||    
T  51435816 acttctatggtacacccgcaaattaaggtgtaccggaactctcatttacattttttttaaattaactatcatttttttatgaaagaaataggtgtttgtt 51435915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 38836252 - 38836154
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||| | ||||||||||||| ||||||||||| |||||| |||| |||||||| ||| |||||||||||| ||||||||||||||||    
T  38836252 acttctacggtacacctgcaaattacggtgtatcggtactctcgcttacaacttttgtaaattaattataattttttatgaaaaaaataggtgtttgtt 38836154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 11109600 - 11109676
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcatttttt 233  Q
    ||||||| | |||||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  11109600 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaaaatttttataaattaactatcatttttt 11109676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 37855524 - 37855425
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    ||||||| | |||| | |||||||| ||||||||||||| |||| |||||||||||||||||||||| |||||||||||| || |||||| |||||||||    
T  37855524 acttctacggtacatctgtaaattaaggtgtaccggtaccctcgcttacaatttttataaattaactgtcattttttatgaaagaaaataagtgtttgtt 37855425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 53388850 - 53388948
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaataaaataggtgtttgtt 255  Q
    ||||||||| |||| | | |||||| ||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||  |||||||||||||||    
T  53388850 acttctatggtacatctgcaaattaaggtgtaccggtactctcgtttac-atttttataaattaaccatcatttttttatgaaagaaataggtgtttgtt 53388948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 14803084 - 14803016
Alignment:
Q  188 accggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  14803084 accggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgtt 14803016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 28038087 - 28037989
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcatt-ttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||||  |||||| |||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||  |||||||| ||||||    
T  28038087 acttctacggtacacccacaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcatttttttatgaaagaaataggtttttgtt 28037989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 153 - 255
Target Start/End: Original strand, 42427568 - 42427670
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42427568 ggggacttctatggtacacccgtaaattacggtgtaccgatactcttgcttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 42427667  T
Q  253 gtt 255  Q
    |||    
T  42427668 gtt 42427670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 3383195 - 3383294
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  3383195 acttctacggtacatccgtaaattacggtgtaccggtactctcacttacaatttttataaattaactatcatttttttatgaagaaaataggtgtttgtt 3383294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 14532828 - 14532926
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||||| ||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  14532828 acttctacggtacacccgcaaattacggtgtatcgatactctcgcttacaatttttataatttaactatcattttttatgaagaaaataggtgtttgtt 14532926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 255
Target Start/End: Original strand, 15771314 - 15771411
Alignment:
Q  158 cttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    |||||| | ||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||| || |||||| |||||||||    
T  15771314 cttctacggtacacccgtaaattaaggtgtaccggtactctcgcttataatttttataaattaactatcattttttataaagaaaataagtgtttgtt 15771411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 166 - 255
Target Start/End: Original strand, 33423047 - 33423136
Alignment:
Q  166 atacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||    
T  33423047 atacatccgcaaattacggtgtaccggtactctcgcttacaatttttataaattaactatcatttttaatgaaaaaaatagctgtttgtt 33423136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 4673605 - 4673704
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    ||||||| | |||||| | |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  4673605 acttctaaggtacacctgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtttgtt 4673704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 6884547 - 6884465
Alignment:
Q  174 gtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  6884547 gtaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtttgtt 6884465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 167 - 255
Target Start/End: Original strand, 11813206 - 11813295
Alignment:
Q  167 tacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    |||||||  |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  11813206 tacacccacaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtttgtt 11813295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 3810454 - 3810549
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||| || ||||||  |||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  3810454 acttctacgacacacccacaaattaaggtgtaccggtactttcgcttacaatttttataaattaactattattttttatgaagaaaataggtgttt 3810549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 37083613 - 37083514
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    ||||||| | |||| ||| |||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  37083613 acttctacggtacatccgcaaattaaggtgtatcggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtttgtt 37083514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 59292 - 59222
Alignment:
Q  185 tgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  59292 tgtaccggtactctcgcttacaatttttataaattaactataattttttatgaagaaaataggtgtttgtt 59222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 34665972 - 34665875
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||||| |||||| |||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||  |||||||||||||||    
T  34665972 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactattattttttatgaaagaaataggtgtttgtt 34665875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 1353908 - 1353811
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||||| |||||| |||||||| ||||||||| ||||| |||||||||||||||||| ||||||||||||  |||||||||||||||    
T  1353908 acttctacggtacacccgcaaattaaggtgtaccagtactctcgcttaca-tttttataaattaactataattttttatgaaagaaataggtgtttgtt 1353811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 5389206 - 5389303
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||||| |||||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||  ||||| |||||||||    
T  5389206 acttctacggtacacccgcaaattaaggtgtaccggcactctcgcttaca-tttttataaattaactatcattttttatgaaagaaatatgtgtttgtt 5389303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 11228029 - 11227932
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||| | |||||| |||||| | ||||||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  11228029 acttctacggtacacctgcaaattaaggtgtatcagtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgtt 11227932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 38963071 - 38963170
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca--ttttttatgaataaaataggtgtttgt 254  Q
    ||||||| | |||||| | |||||| |||| ||||||||||||| ||||| ||||||||||||||||||||  |||||||| ||  ||||||||||||||    
T  38963071 acttctacgttacacctgcaaattaaggtgcaccggtactctcgcttaca-tttttataaattaactatcattttttttataaaagaaataggtgtttgt 38963169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 5e-37; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 153 - 255
Target Start/End: Original strand, 14498304 - 14498406
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14498304 ggggatttctatggtacacccgtaaattacggtctaccggtactctcacttacaatttttataaattaactatcattttttatgaagaaaataggtgttt 14498403  T
Q  253 gtt 255  Q
    |||    
T  14498404 gtt 14498406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 154 - 255
Target Start/End: Complemental strand, 38502595 - 38502495
Alignment:
Q  154 gggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttg 253  Q
    |||||||||||| |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  38502595 gggacttctatggtacacccgtaaattacggtgtatcggtattctcgcttacaatttttataaattaactatcat-ttttatgaagaaaataggtgtttg 38502497  T
Q  254 tt 255  Q
    ||    
T  38502496 tt 38502495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 10280960 - 10280864
Alignment:
Q  159 ttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  10280960 ttctatggtacacccgtgaattacggtgtatcggtactctcgtttataatttttataaattaattatcattttttatgaagaaaataggtgtttgtt 10280864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 158 - 255
Target Start/End: Original strand, 29229181 - 29229279
Alignment:
Q  158 cttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaataaaataggtgtttgtt 255  Q
    |||||| | |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  29229181 cttctacggtacacccgtaaattacggtgtaccggtactctcacttacaatttttataaattaactatcacttttttatgaagaaaataggtgtttgtt 29229279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 15725894 - 15725992
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||| | |||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  15725894 acttctacggtacacctgcaaattacggtgtaccgatactctcgcttacaatttttataaattaactataattttttatgaagaaaataggtgtttgtt 15725992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 255
Target Start/End: Complemental strand, 36002765 - 36002663
Alignment:
Q  153 ggggacttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||||||||| |||| | |||||||||||||   | |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  36002765 ggggacttctatggtacatctgtaaattacggtgcttcagtactctcgtttacaatttttataaattaactattattttttatgaagaaaataggtgttt 36002666  T
Q  253 gtt 255  Q
    |||    
T  36002665 gtt 36002663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 23275026 - 23274930
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccgg-tactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||||| |||||||||| |||||| |||||||||| |||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  23275026 acttctacgatacacccgcaaattaaggtgtaccgggtactctcgcttacaatttttataaattaactattattttttatgaagaaaataggtgttt 23274930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 29460037 - 29459938
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    ||||||| | |||||| | |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  29460037 acttctacggtacacctgcaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaataggtgtttgtt 29459938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 34332513 - 34332416
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||||| |||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  34332513 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgtt 34332416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 946373 - 946273
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcatt--ttttatgaataaaataggtgtttgt 254  Q
    ||||||| | |||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||  ||||||||| |||||| ||||||||    
T  946373 acttctacggtacacccgcaaattacggtgtaccggtactctcacttacaatttttataaattaactatcattttttttatgaagaaaataagtgtttgt 946274  T
Q  255 t 255  Q
    |    
T  946273 t 946273  T

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Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 37511491 - 37511392
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcatttttta-tgaataaaataggtgtttgtt 255  Q
    ||||||| | |||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| | || ||||| ||||||||||    
T  37511491 acttctacggtacatccgtaaattaaggtgtaccggtactctcgcttacaatttttataaattaactatcattttttattaaagaaaattggtgtttgtt 37511392  T

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Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 44935300 - 44935203
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||||| || ||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  44935300 acttctacggtacacccgcaatttaaggtgtaccggtactctcggttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgtt 44935203  T

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Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 12162957 - 12163043
Alignment:
Q  170 acccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaataaaataggtgtttgtt 255  Q
    ||||| ||||||| ||||||||||||||||  |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  12162957 acccgcaaattacagtgtaccggtactctcacttacaatttttataaattaactatcatttttttatgtagaaaataggtgtttgtt 12163043  T

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Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 12407385 - 12407471
Alignment:
Q  170 acccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatca-ttttttatgaataaaataggtgtttgtt 255  Q
    ||||| ||||||| ||||||||||||||||  |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  12407385 acccgcaaattacagtgtaccggtactctcacttacaatttttataaattaactatcatttttttatgtagaaaataggtgtttgtt 12407471  T

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Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 28090592 - 28090495
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||||| || ||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  |||||| ||||||||    
T  28090592 acttctacggtacacccgcaatttaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaatagatgtttgtt 28090495  T

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Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 29773846 - 29773749
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||||| || ||| |||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  29773846 acttctacggtacacccgcaatttaaggtgtaccggtactttcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgtt 29773749  T

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Target: chr8; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 37161916 - 37161812
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtac------tctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgt 250  Q
    ||||||||| |||| ||||||||||||||||||| ||||      ||||| ||| |||||||||||||||||||| |||||||||||| |||||||||||    
T  37161916 acttctatggtacatccgtaaattacggtgtaccagtaccagtactctcgcttataatttttataaattaactataattttttatgaagaaaataggtgt 37161817  T
Q  251 ttgtt 255  Q
    |||||    
T  37161816 ttgtt 37161812  T

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Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 23275173 - 23275097
Alignment:
Q  177 aattacggtgtaccgg-tactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgttt 252  Q
    ||||| |||||||||| |||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  23275173 aattaaggtgtaccgggtactctcgcttacaatttttataaattaactattattttttatgaagaaaataggtgttt 23275097  T

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Target: chr8; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 39171002 - 39171102
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaatta---actatcattttttatgaataaaataggtgtttg 253  Q
    ||||||| | |||||||| |||||| |||||||||||||||||| |||| ||||||||||||||   ||||||||||||||||||  |||||||||||||    
T  39171002 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactactatcattttttatgaaagaaataggtgtttg 39171100  T
Q  254 tt 255  Q
    ||    
T  39171101 tt 39171102  T

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Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 23286967 - 23286892
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcatttttt 233  Q
    ||||||| | |||||||| |||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  23286967 acttctacggtacacccgcaaattaaggtgtaccggtactctcgcttac-atttttataaattaactatcatttttt 23286892  T

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Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 255
Target Start/End: Original strand, 39171105 - 39171183
Alignment:
Q  176 aaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    |||||| |||||||| ||||||||| ||||| |||||||||||||||||||||||||||| ||  |||||||||||||||    
T  39171105 aaattaaggtgtaccagtactctcgcttaca-tttttataaattaactatcattttttataaaagaaataggtgtttgtt 39171183  T

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Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 29265619 - 29265674
Alignment:
Q  183 ggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaa 238  Q
    |||||||||||||||| ||||   | |||||||||||||| |||||||||||||||    
T  29265619 ggtgtaccggtactcttgtttcataattttataaattaacgatcattttttatgaa 29265674  T

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Target: scaffold0077 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 48411 - 48314
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||||| || ||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  48411 acttctacggtacacccgcaatttaaggtgtaccggtactctcgcttaca-tttttataaattaactatcattttttatgaaagaaataggtgtttgtt 48314  T

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Target: scaffold0005 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 36643 - 36711
Alignment:
Q  188 accggtactctcgtttacaatttttataaattaactatcattttttatg-aataaaataggtgtttgtt 255  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  36643 accggtactctcgcttacaatttttataaattaactatcattttttatgaaagaaaattggtgtttgtt 36711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 6640 - 6543
Alignment:
Q  157 acttctatgatacacccgtaaattacggtgtaccggtactctcgtttacaatttttataaattaactatcattttttatgaataaaataggtgtttgtt 255  Q
    ||||||| | |||||||| || ||| |||||||||||||||||| |||| |||||||||||| |  || ||||  ||||||   |||||||||||||||    
T  6640 acttctacggtacacccgcaatttaaggtgtaccggtactctcggttac-atttttataaatcacttaccattccttatgacagaaataggtgtttgtt 6543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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