View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0914_high_61 (Length: 251)
Name: NF0914_high_61
Description: NF0914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0914_high_61 |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 16 - 248
Target Start/End: Complemental strand, 12025444 - 12025212
Alignment:
| Q |
16 |
atgcagaatatcttatacccaaattagctactcccattatttgtttttcttctacacttcaaaatgaactactaaaataaccaaaaatagtgtcattaaa |
115 |
Q |
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||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
12025444 |
atgcagaatattttatacccaaattagctacttccattatttttttttcttctacacttcaaaatgaactactaaaataaccaaaaatagtttcattaaa |
12025345 |
T |
|
| Q |
116 |
atcccaagtcaaccatgaagtcaaagtcaccgctaaaatcaacaattaccgcttgaaaattctaatacagttccctctagaaaacgacactgcatttagc |
215 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12025344 |
atcccaagtcaaccatgaaatcaaagtcaccgctaaaatcaacaattaccgcttgaaaattctaatacagttccctctagaaaacgacactgcatttagc |
12025245 |
T |
|
| Q |
216 |
aatatcatagtagattagtagtagccacacaca |
248 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
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| T |
12025244 |
aatatcatagtagattagtagtagccacacaca |
12025212 |
T |
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