View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0914_low_1 (Length: 865)

Name: NF0914_low_1
Description: NF0914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0914_low_1
NF0914_low_1
[»] chr7 (27 HSPs)
chr7 (30-565)||(15932651-15933194)
chr7 (30-565)||(15940993-15941536)
chr7 (395-565)||(7157650-7157819)
chr7 (769-856)||(15940702-15940790)
chr7 (413-550)||(47921857-47921994)
chr7 (653-716)||(15932500-15932563)
chr7 (653-716)||(15940842-15940905)
chr7 (653-696)||(47922098-47922141)
chr7 (781-839)||(1826246-1826304)
chr7 (662-716)||(7157499-7157553)
chr7 (786-828)||(5397288-5397330)
chr7 (786-828)||(538756-538798)
chr7 (786-828)||(825796-825838)
chr7 (786-828)||(4312729-4312771)
chr7 (786-828)||(8718037-8718079)
chr7 (786-828)||(9583065-9583107)
chr7 (786-828)||(11921308-11921350)
chr7 (786-828)||(12548806-12548848)
chr7 (786-828)||(13658038-13658080)
chr7 (786-828)||(14221719-14221761)
chr7 (786-828)||(14551271-14551313)
chr7 (786-828)||(15065941-15065983)
chr7 (786-828)||(15916777-15916819)
chr7 (786-828)||(16119850-16119892)
chr7 (786-828)||(16465617-16465659)
chr7 (786-828)||(18287774-18287816)
chr7 (786-828)||(27291509-27291551)
[»] chr4 (19 HSPs)
chr4 (30-562)||(11164086-11164632)
chr4 (769-856)||(50882118-50882206)
chr4 (409-552)||(50881662-50881807)
chr4 (407-549)||(16635628-16635770)
chr4 (653-710)||(11163937-11163994)
chr4 (782-828)||(14233259-14233305)
chr4 (786-828)||(3354812-3354854)
chr4 (786-828)||(10630922-10630964)
chr4 (786-828)||(11496615-11496657)
chr4 (786-828)||(13823085-13823127)
chr4 (786-828)||(14653999-14654041)
chr4 (786-828)||(15254520-15254562)
chr4 (786-828)||(17484911-17484953)
chr4 (786-828)||(18081460-18081502)
chr4 (786-828)||(38426895-38426937)
chr4 (786-828)||(42709732-42709774)
chr4 (786-828)||(56580540-56580582)
chr4 (787-828)||(15865660-15865701)
chr4 (679-716)||(50882029-50882066)
[»] chr5 (19 HSPs)
chr5 (76-565)||(34657071-34657572)
chr5 (409-565)||(20934269-20934425)
chr5 (653-716)||(20934513-20934576)
chr5 (417-494)||(19183853-19183930)
chr5 (653-716)||(34656920-34656983)
chr5 (769-839)||(26306856-26306926)
chr5 (774-828)||(27270565-27270619)
chr5 (411-526)||(31232256-31232370)
chr5 (30-61)||(34657571-34657602)
chr5 (786-828)||(15735706-15735748)
chr5 (786-828)||(18484213-18484255)
chr5 (786-828)||(20595832-20595874)
chr5 (786-828)||(20602118-20602160)
chr5 (786-828)||(20608409-20608451)
chr5 (786-828)||(22317514-22317556)
chr5 (786-828)||(25006809-25006851)
chr5 (786-828)||(25116172-25116214)
chr5 (786-828)||(25175262-25175304)
chr5 (786-828)||(30759656-30759698)
[»] chr3 (18 HSPs)
chr3 (420-565)||(11177716-11177861)
chr3 (653-716)||(11177949-11178012)
chr3 (411-562)||(23046549-23046698)
chr3 (679-716)||(23046403-23046440)
chr3 (786-828)||(3245589-3245631)
chr3 (786-828)||(3339227-3339269)
chr3 (786-828)||(4382918-4382960)
chr3 (786-828)||(10546937-10546979)
chr3 (786-828)||(10602473-10602515)
chr3 (786-828)||(12160208-12160250)
chr3 (786-828)||(12776535-12776577)
chr3 (786-828)||(13001426-13001468)
chr3 (786-828)||(13136211-13136253)
chr3 (786-828)||(13504882-13504924)
chr3 (786-828)||(14348589-14348631)
chr3 (786-828)||(15946781-15946823)
chr3 (786-828)||(20584275-20584317)
chr3 (786-828)||(27356729-27356771)
[»] chr8 (18 HSPs)
chr8 (409-565)||(19901798-19901954)
chr8 (769-847)||(19902157-19902235)
chr8 (654-716)||(19902043-19902105)
chr8 (786-828)||(22102565-22102607)
chr8 (666-716)||(40755908-40755958)
chr8 (786-828)||(11346954-11346996)
chr8 (770-839)||(19352475-19352544)
chr8 (786-828)||(19767697-19767739)
chr8 (786-828)||(20002287-20002329)
chr8 (786-828)||(20038982-20039024)
chr8 (786-828)||(20712606-20712648)
chr8 (786-828)||(21098795-21098837)
chr8 (786-828)||(21104116-21104158)
chr8 (786-828)||(21831189-21831231)
chr8 (786-828)||(21843525-21843567)
chr8 (786-828)||(22033556-22033598)
chr8 (786-828)||(22099656-22099698)
chr8 (786-828)||(22370115-22370157)
[»] scaffold1661 (2 HSPs)
scaffold1661 (434-565)||(156-287)
scaffold1661 (653-716)||(375-438)
[»] scaffold0029 (7 HSPs)
scaffold0029 (434-565)||(88646-88777)
scaffold0029 (769-856)||(77374-77462)
scaffold0029 (653-716)||(88865-88928)
scaffold0029 (653-716)||(77258-77321)
scaffold0029 (385-470)||(77047-77131)
scaffold0029 (527-565)||(77132-77170)
scaffold0029 (786-828)||(123541-123583)
[»] scaffold1407 (1 HSPs)
scaffold1407 (316-492)||(1239-1415)
[»] scaffold0226 (3 HSPs)
scaffold0226 (409-562)||(3515-3668)
scaffold0226 (769-856)||(3222-3310)
scaffold0226 (661-716)||(3362-3417)
[»] scaffold0453 (2 HSPs)
scaffold0453 (395-537)||(9609-9751)
scaffold0453 (653-716)||(9430-9493)
[»] scaffold0059 (2 HSPs)
scaffold0059 (413-557)||(39139-39283)
scaffold0059 (661-716)||(39386-39441)
[»] chr2 (14 HSPs)
chr2 (409-534)||(23689284-23689409)
chr2 (769-839)||(17334589-17334659)
chr2 (774-828)||(19805606-19805660)
chr2 (786-828)||(5500266-5500308)
chr2 (786-828)||(22665234-22665276)
chr2 (786-828)||(23159386-23159428)
chr2 (786-828)||(23570643-23570685)
chr2 (786-828)||(23644117-23644159)
chr2 (786-828)||(24171518-24171560)
chr2 (786-828)||(25144758-25144800)
chr2 (786-828)||(25804268-25804310)
chr2 (786-828)||(27631668-27631710)
chr2 (786-828)||(27768817-27768859)
chr2 (663-716)||(23689109-23689162)
[»] scaffold0334 (2 HSPs)
scaffold0334 (420-562)||(16110-16251)
scaffold0334 (653-716)||(15954-16017)
[»] scaffold0177 (1 HSPs)
scaffold0177 (316-492)||(32430-32609)
[»] scaffold0035 (2 HSPs)
scaffold0035 (782-828)||(88357-88403)
scaffold0035 (786-828)||(50507-50549)
[»] chr1 (10 HSPs)
chr1 (434-516)||(17951075-17951157)
chr1 (782-828)||(18478230-18478276)
chr1 (407-460)||(7589078-7589131)
chr1 (39-75)||(7588755-7588791)
chr1 (786-828)||(17094602-17094644)
chr1 (786-828)||(19364201-19364243)
chr1 (786-828)||(20237628-20237670)
chr1 (786-828)||(27047046-27047088)
chr1 (786-828)||(52938622-52938664)
chr1 (667-712)||(24067936-24067981)
[»] scaffold0158 (1 HSPs)
scaffold0158 (782-828)||(31426-31472)
[»] scaffold0011 (2 HSPs)
scaffold0011 (784-828)||(172274-172318)
scaffold0011 (786-828)||(162015-162057)
[»] scaffold0974 (1 HSPs)
scaffold0974 (786-828)||(1275-1317)
[»] scaffold0861 (1 HSPs)
scaffold0861 (786-828)||(927-969)
[»] scaffold0773 (1 HSPs)
scaffold0773 (786-828)||(644-686)
[»] scaffold0582 (1 HSPs)
scaffold0582 (786-828)||(8826-8868)
[»] scaffold0566 (1 HSPs)
scaffold0566 (786-828)||(2775-2817)
[»] scaffold0512 (1 HSPs)
scaffold0512 (786-828)||(5252-5294)
[»] scaffold0375 (1 HSPs)
scaffold0375 (786-828)||(12751-12793)
[»] scaffold0230 (1 HSPs)
scaffold0230 (786-828)||(15850-15892)
[»] scaffold0156 (1 HSPs)
scaffold0156 (786-828)||(998-1040)
[»] scaffold0096 (1 HSPs)
scaffold0096 (786-828)||(38509-38551)
[»] scaffold0056 (1 HSPs)
scaffold0056 (786-828)||(42257-42299)
[»] scaffold0031 (1 HSPs)
scaffold0031 (786-828)||(22775-22817)
[»] scaffold0020 (1 HSPs)
scaffold0020 (786-828)||(121119-121161)
[»] chr6 (9 HSPs)
chr6 (786-828)||(2181226-2181268)
chr6 (786-828)||(15699727-15699769)
chr6 (786-828)||(18448306-18448348)
chr6 (786-828)||(22165550-22165592)
chr6 (786-828)||(22243984-22244026)
chr6 (786-828)||(23023259-23023301)
chr6 (786-828)||(25963414-25963456)
chr6 (786-828)||(25968061-25968103)
chr6 (786-828)||(30671808-30671850)


Alignment Details
Target: chr7 (Bit Score: 475; Significance: 0; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 475; E-Value: 0
Query Start/End: Original strand, 30 - 565
Target Start/End: Complemental strand, 15933194 - 15932651
Alignment:
Q  30 cagcgaagcacaacaattacaagcaattggaactgaatgaaactccaatt--------gaaagtgaaatgaacggacggtgcagccaggaatttgaagaa 121  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  15933194 cagcgaagcacaacaattacaagcaattggaattgaatgaaactccaattctccaattgaaagtgaaatgaacggacggtgcagccaggaatttgaagaa 15933095  T
Q  122 atacacacggcactattgaattcttagcaattgaaattcaattaaatagccacccaacaatataaactcacggcttgagttataacaaggtaggtagcaa 221  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  15933094 atacacacggcactattgaattcttagcaatggaaattcaattaaatagccacccaacaatatagactcacggcttgagttatagcaaggtaggtagcaa 15932995  T
Q  222 cacggcaattggaaaatatggcaagaaaaactaaattggaatgaaaaaggaatgatgaaaacaggaactagcgattgaaatagttacttaattcaaaatt 321  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15932994 catggcaattggaaaatatggcaagaaaaactaaattggaatgaaaaaggaatgatgaaaacaggaactagcaattgaaatagttacttaattcaaaatt 15932895  T
Q  322 gcaattaacaaaggttctgaaattgtaaaattgtacgatagctaaacaaaagcttaaattacgataagcagtctctaaataacatagtttctctctaaaa 421  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  15932894 gcaattaacaaaggttctgaaattgtaaaattgtacgatagctaaacaaaagcttaaattacgataagcagtttctaaataacacagtttctctctaaaa 15932795  T
Q  422 agcttggtgtcctcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatcatgtctcaagtagtggagaaaatgaagaa 521  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15932794 agcttggtgtcttcaactgagttcttcaggtctatttatagggaaaaatctgctctgaagtgcttctgatcatgtctcaagtagtggagaaaatgaagaa 15932695  T
Q  522 agtgggcaaactgcttctgaaacgtggggaaagaataggtcagg 565  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15932694 agtgggcaaactgcttctgaaacgtggggaaagaataggtcagg 15932651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 475; E-Value: 0
Query Start/End: Original strand, 30 - 565
Target Start/End: Complemental strand, 15941536 - 15940993
Alignment:
Q  30 cagcgaagcacaacaattacaagcaattggaactgaatgaaactccaatt--------gaaagtgaaatgaacggacggtgcagccaggaatttgaagaa 121  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  15941536 cagcgaagcacaacaattacaagcaattggaattgaatgaaactccaattctccaattgaaagtgaaatgaacggacggtgcagccaggaatttgaagaa 15941437  T
Q  122 atacacacggcactattgaattcttagcaattgaaattcaattaaatagccacccaacaatataaactcacggcttgagttataacaaggtaggtagcaa 221  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  15941436 atacacacggcactattgaattcttagcaatggaaattcaattaaatagccacccaacaatatagactcacggcttgagttatagcaaggtaggtagcaa 15941337  T
Q  222 cacggcaattggaaaatatggcaagaaaaactaaattggaatgaaaaaggaatgatgaaaacaggaactagcgattgaaatagttacttaattcaaaatt 321  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15941336 cacggcaattggaaaatatggcaagaaaaactaagttggaatgaaaaaggaatgatgaaaacaggaactagcaattgaaatagttacttaattcaaaatt 15941237  T
Q  322 gcaattaacaaaggttctgaaattgtaaaattgtacgatagctaaacaaaagcttaaattacgataagcagtctctaaataacatagtttctctctaaaa 421  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  15941236 gcaattaacaaaggttctgaaattgtaaaattgtacgatagctaaacaaaagcttaaattacgataagcagtttctaaataacacagtttctctctaaaa 15941137  T
Q  422 agcttggtgtcctcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatcatgtctcaagtagtggagaaaatgaagaa 521  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15941136 agcttggtgtcttcaactgagttcttcaggtctatttatagggaaaaatctgctctgaagtgcttctgatcatgtctcaagtagtggagaaaatgaagaa 15941037  T
Q  522 agtgggcaaactgcttctgaaacgtggggaaagaataggtcagg 565  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15941036 agtgggcaaactgcttctgaaacgtggggaaagaataggtcagg 15940993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 395 - 565
Target Start/End: Complemental strand, 7157819 - 7157650
Alignment:
Q  395 tctaaataacatagtttctctctaaaaagcttggtgtcctcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatcat 494  Q
    ||||||||||| | ||||||||| ||||||||||||||| |||||||||| | ||||| ||||||||||   |||||| | ||||||||| |||||||||    
T  7157819 tctaaataacaaaatttctctctgaaaagcttggtgtccacaactgagttttccaggtttatttataggttgaaatctgc-ctgaagtgcgtctgatcat 7157721  T
Q  495 gtctcaagtagtggagaaaatgaagaaagtgggcaaactgcttctgaaacgtggggaaagaataggtcagg 565  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||| |||||||    
T  7157720 gtctcaagtagtggagaaaacgaaggaagtgggcaaactgcttctgaaaagtggggaaagaattggtcagg 7157650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 769 - 856
Target Start/End: Complemental strand, 15940790 - 15940702
Alignment:
Q  769 agtgcattttacgtgttatcaaactcccctacacttgaaccgttgcttgtcctcaagcaacttagcttgcatata-aaaacagtataat 856  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15940790 agtgcattttacgtgttatcaaactcccctacacttgaaccgttgcttgtcctcaagcaacttagcttgcatataaaaaacagtataat 15940702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 413 - 550
Target Start/End: Original strand, 47921857 - 47921994
Alignment:
Q  413 tctctaaaaagcttggtgtcctcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatcatgtctcaagtagtggagaa 512  Q
    |||||| |||||||||||||| ||| |||||| | ||||| ||||||||||   |||||| | ||||||||||||||||||||||| |||||||||| ||    
T  47921857 tctctataaagcttggtgtccacaagtgagttttccaggtttatttataggctgaaatctgccctgaagtgcttctgatcatgtcttaagtagtggaaaa 47921956  T
Q  513 aatgaagaaagtgggcaaactgcttctgaaacgtgggg 550  Q
    ||||| | |||||||||||| |||||||||||||||||    
T  47921957 aatgatggaagtgggcaaacggcttctgaaacgtgggg 47921994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 653 - 716
Target Start/End: Complemental strand, 15932563 - 15932500
Alignment:
Q  653 gacgcgcggagacctttaaccgataaatacctgaaatagacacacactaccaacataacattgc 716  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15932563 gacgcgcggagacctttaaccgataaatacctgaaatagacacacactaccaacataacattgc 15932500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 653 - 716
Target Start/End: Complemental strand, 15940905 - 15940842
Alignment:
Q  653 gacgcgcggagacctttaaccgataaatacctgaaatagacacacactaccaacataacattgc 716  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15940905 gacgcgcggagacctttaaccgataaatacctgaaatagacacacactaccaacataacattgc 15940842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 653 - 696
Target Start/End: Original strand, 47922098 - 47922141
Alignment:
Q  653 gacgcgcggagacctttaaccgataaatacctgaaatagacaca 696  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  47922098 gacgcgcggagacctttaaccgataaatacctgaaatagacaca 47922141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 781 - 839
Target Start/End: Complemental strand, 1826304 - 1826246
Alignment:
Q  781 gtgttatcaaactcccctacacttgaaccgttgcttgtcctcaagcaacttagcttgca 839  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||||| ||||||||||    
T  1826304 gtgttatcaaagtcccctacacttgaacaattgcttgtcctaaagcaatttagcttgca 1826246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 662 - 716
Target Start/End: Complemental strand, 7157553 - 7157499
Alignment:
Q  662 agacctttaaccgataaatacctgaaatagacacacactaccaacataacattgc 716  Q
    |||||||||||| |||||||||| ||||||||||||| ||||| |||||||||||    
T  7157553 agacctttaaccaataaatacctaaaatagacacacaataccagcataacattgc 7157499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 5397330 - 5397288
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  5397330 atcaaactcccctacacttgaatctttgcttgtcctcaagcaa 5397288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 538756 - 538798
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  538756 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 538798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 825838 - 825796
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  825838 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 825796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 4312771 - 4312729
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  4312771 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 4312729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 8718079 - 8718037
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  8718079 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 8718037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 9583107 - 9583065
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  9583107 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 9583065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 11921308 - 11921350
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  11921308 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 11921350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 12548806 - 12548848
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  12548806 atcaaactccccaacacttgaatctttgcttgtcctcaagcaa 12548848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 13658080 - 13658038
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  13658080 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 13658038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 14221719 - 14221761
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  14221719 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 14221761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 14551313 - 14551271
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  14551313 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 14551271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 15065983 - 15065941
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  15065983 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 15065941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 15916777 - 15916819
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  15916777 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 15916819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 16119850 - 16119892
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  16119850 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 16119892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 16465617 - 16465659
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  16465617 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 16465659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 18287816 - 18287774
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  18287816 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 18287774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 27291551 - 27291509
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  27291551 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 27291509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 385; Significance: 0; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 30 - 562
Target Start/End: Complemental strand, 11164632 - 11164086
Alignment:
Q  30 cagcgaagcacaacaattacaagcaattggaactgaatgaaactccaatt--------gaaagtgaaatgaacggacggtgcagccaggaatttgaagaa 121  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  11164632 cagcgaagcacaacaattacaagcaattggaattgaatgaaactccaattctccaattgaaagtgaaatgaacggacggtgcagccaggaatttgaagaa 11164533  T
Q  122 atacacacggcactattgaattcttagcaattgaaattcaattaaatagccacccaacaatataaactcacggcttgagttataacaaggtaggtagcaa 221  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||| ||||||||||| | |||||||||||||||    
T  11164532 atacacacggcactattgaattcttagcaatggaaattcaattaaatagccacacaacaatatagactcatggcttgagttaaagcaaggtaggtagcaa 11164433  T
Q  222 cacggcaattggaaaatatggcaagaaaaactaaattggaatgaaaaaggaatgatgaaaacaggaactagcgattgaaatagttacttaattcaaaatt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  11164432 cacggcaattggaaaatatggcaagaaaaactaaattggaatgaaaaaggaatgatgaaaacaggaactagaaattgaaatagttacttaattcaaaatt 11164333  T
Q  322 gcaattaacaaaggttctgaaattgtaaaattgtacgatagctaaacaaaagcttaaattacgataag-------cagtctctaaataacatagtttctc 414  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||| | ||||||    
T  11164332 gcaattaagaaaggttctgaaattgtaaaattgtacgatagctaaacaaaagcttaaattacgataagcaataatcagtttctaaataacacaatttctc 11164233  T
Q  415 tctaaaaagcttggtgtcctcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatcatgtctcaagtagtggagaaaa 514  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | ||||||||||||||    
T  11164232 tctaaaaagcttggtgtcttcaactgagttcttcaggtctatttatagggaaaaatctgctctgaagtgcttctgatcatgttcctagtagtggagaaaa 11164133  T
Q  515 tgaagaaagtgggcaaactgcttctgaaacgtggggaaagaataggtc 562  Q
    || || ||||| | ||||||||| | |||||| |||||||||| ||||    
T  11164132 tggaggaagtgagaaaactgcttttcaaacgt-gggaaagaattggtc 11164086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 769 - 856
Target Start/End: Original strand, 50882118 - 50882206
Alignment:
Q  769 agtgcattttacgtgttatcaaactcccctacacttgaaccgttgcttgtcctcaagcaacttagcttgcatataaaaa-cagtataat 856  Q
    |||| ||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| |||||||||    
T  50882118 agtgtattttacgtgttatcaaactcccctacacctgaaccgttacttgtcttcaagcaacttagcttgcatataaaaagcagtataat 50882206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 409 - 552
Target Start/End: Original strand, 50881662 - 50881807
Alignment:
Q  409 tttctctctaaaaa-gcttggtgtcctcaactgagttcttcaggtctatttatagggaaaaa-tctcctctgaagtgcttctgatcatgtctcaagtagt 506  Q
    |||||||||||||| |||||||| | ||||||||||  || ||||||||||||||| ||||| ||| || |||||||| |||||||||||||||||| ||    
T  50881662 tttctctctaaaaatgcttggtgccttcaactgagtctttaaggtctatttataggcaaaaaatctgctttgaagtgcctctgatcatgtctcaagtggt 50881761  T
Q  507 ggagaaaatgaagaaagtgggcaaactgcttctgaaacgtggggaa 552  Q
    ||||||||||  | || || || ||||| |||||||||||||||||    
T  50881762 ggagaaaatgttggaattgagccaactgattctgaaacgtggggaa 50881807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 407 - 549
Target Start/End: Complemental strand, 16635770 - 16635628
Alignment:
Q  407 agtttctctctaaaaa-gcttggtgtcctcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatcatg-tctcaagta 504  Q
    |||||||||||||||| |||||||||| |||||||| ||||| ||||||||||||| |||||||||  ||||||| |||||||||||||| |||| ||||    
T  16635770 agtttctctctaaaaaagcttggtgtcttcaactgaattctttaggtctatttata-ggaaaaatcggctctgaaatgcttctgatcatgttctc-agta 16635673  T
Q  505 gtggagaaaatgaagaaagtgggcaaactgcttctgaaacgtggg 549  Q
    |||||||||||  || ||||| | |||||| ||  ||||||||||    
T  16635672 gtggagaaaatagaggaagtgagaaaactgattacgaaacgtggg 16635628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 653 - 710
Target Start/End: Complemental strand, 11163994 - 11163937
Alignment:
Q  653 gacgcgcggagacctttaaccgataaatacctgaaatagacacacactaccaacataa 710  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  11163994 gacgcgcggagacctttaaccgataaatacctgaaatagacacacaataccagcataa 11163937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 782 - 828
Target Start/End: Complemental strand, 14233305 - 14233259
Alignment:
Q  782 tgttatcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  14233305 tgttatcaaactcccctatacttgaaccattgcttgtcctcaagcaa 14233259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 3354854 - 3354812
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| |||||||||  |||||||||||||||||||    
T  3354854 atcaaactcccccacacttgaatagttgcttgtcctcaagcaa 3354812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 10630964 - 10630922
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  10630964 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 10630922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 11496615 - 11496657
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  11496615 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 11496657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 13823127 - 13823085
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  13823127 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 13823085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 14653999 - 14654041
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  14653999 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 14654041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 15254562 - 15254520
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  15254562 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 15254520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 17484911 - 17484953
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  17484911 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 17484953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 18081460 - 18081502
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  18081460 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 18081502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 38426937 - 38426895
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  38426937 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 38426895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 42709732 - 42709774
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  42709732 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 42709774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 56580540 - 56580582
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  56580540 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 56580582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 787 - 828
Target Start/End: Complemental strand, 15865701 - 15865660
Alignment:
Q  787 tcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    ||||||||||| ||||||||| | ||||||||||||||||||    
T  15865701 tcaaactcccccacacttgaatctttgcttgtcctcaagcaa 15865660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 679 - 716
Target Start/End: Original strand, 50882029 - 50882066
Alignment:
Q  679 atacctgaaatagacacacactaccaacataacattgc 716  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  50882029 atacctgaaatagacacacaataccagcataacattgc 50882066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 363; Significance: 0; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 76 - 565
Target Start/End: Complemental strand, 34657572 - 34657071
Alignment:
Q  76 aattgaaagtgaaatgaacggacggtgcagccaggaatttgaagaaatacacacggcactattgaattcttagcaattgaaattcaattaaatagccacc 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  34657572 aattgaaagtgaaatgaacggacggtgcagccaggaatttgaagaaatacacacagcactattgaattcttagcaatggaaattcaattaaatagccacc 34657473  T
Q  176 caacaatataaactcacggcttgagttataacaaggtaggtagcaacacggcaattggaaaatatggcaagaaaaactaaattggaatgaaaaaggaatg 275  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34657472 caacaatatagactcacggcttgagttaaagcaaggtaggtagcaacacggcaattggaaaatacggcaagaaaaactaaattggaatgaaaaaggaatg 34657373  T
Q  276 atgaaaacaggaactagcgattgaaatagttacttaattcaaaattgcaattaacaaaggttctgaaattgtaaaattgtacgatagctaaacaaaagct 375  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34657372 atgaaaacaggaactagaaattgaaatagtaacttaattcaaaattgcaattaacaaaggttctgaaattgtaaaattgtacgatagctaaacaaaagct 34657273  T
Q  376 taaattacgata-------------agcagtctctaaataacatagtttctctctaaaaagcttggtgtcctcaactgagttcttcaggtctatttatag 462  Q
    ||||||||||||             |||||| ||||||||||| | ||||||||||||||||||||||||| |||||||||| | ||||| |||||||||    
T  34657272 taaattacgataagcaataaaaataagcagtttctaaataacacaatttctctctaaaaagcttggtgtccacaactgagttttccaggtttatttatag 34657173  T
Q  463 ggaaaaatctcctctgaagtgcttctgatcatgtctcaagtagtggagaaaatgaagaaagtgggcaaactgcttctgaaacgtggggaaagaataggtc 562  Q
    |   |||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  34657172 gctgaaatctgc-ctgaagtgcttctgatcatgtctcaagtagtggagaaaatgaaggaagtgggcaaactgcttctgaaacgtggggaaagaattggtc 34657074  T
Q  563 agg 565  Q
    |||    
T  34657073 agg 34657071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 409 - 565
Target Start/End: Original strand, 20934269 - 20934425
Alignment:
Q  409 tttctctctaaaaagcttggtgtcctcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatcatgtctcaagtagtgg 508  Q
    ||||||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||    
T  20934269 tttctctctaaaatgcttggtgtattcaactgagttcttcaggtctatttatagagaaaaatctgctctgaagtgcttctgatcatatctcaagtagtgg 20934368  T
Q  509 agaaaatgaagaaagtgggcaaactgcttctgaaacgtggggaaagaataggtcagg 565  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20934369 agaaaatgaagaaagtgggcaaactgcttctgaaacgtggggaaagaataggtcagg 20934425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 653 - 716
Target Start/End: Original strand, 20934513 - 20934576
Alignment:
Q  653 gacgcgcggagacctttaaccgataaatacctgaaatagacacacactaccaacataacattgc 716  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20934513 gacgcgcggagacctttaaccgataaatacctgaaatagacacacactaccgacataacattgc 20934576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 417 - 494
Target Start/End: Complemental strand, 19183930 - 19183853
Alignment:
Q  417 taaaaagcttggtgtcctcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatcat 494  Q
    |||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||| ||||    
T  19183930 taaaaagcttggtgtcttcaactgagttcttcaggtttatttatggggaaaaatctgctctgaagtgcttctggtcat 19183853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 653 - 716
Target Start/End: Complemental strand, 34656983 - 34656920
Alignment:
Q  653 gacgcgcggagacctttaaccgataaatacctgaaatagacacacactaccaacataacattgc 716  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  34656983 gacgcgtggagacctttaaccgataaatacctgaaatagacacacaataccagcataacattgc 34656920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 769 - 839
Target Start/End: Original strand, 26306856 - 26306926
Alignment:
Q  769 agtgcattttacgtgttatcaaactcccctacacttgaaccgttgcttgtcctcaagcaacttagcttgca 839  Q
    |||| |||||||||||||||||||| ||  ||||||||||| || ||||||||||| ||| ||||||||||    
T  26306856 agtgtattttacgtgttatcaaactacctcacacttgaaccattacttgtcctcaaacaatttagcttgca 26306926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 774 - 828
Target Start/End: Complemental strand, 27270619 - 27270565
Alignment:
Q  774 attttacgtgttatcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    ||||| |||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  27270619 attttgcgtgttatcaaactcccccacacttgaatcattgcttgtcctcaagcaa 27270565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 411 - 526
Target Start/End: Complemental strand, 31232370 - 31232256
Alignment:
Q  411 tctctctaaaaagcttggtgtcctcaactgagttcttcaggtctatttatagggaaaaa-tctcctctgaagtgcttctgatcatgtctcaagtagtgga 509  Q
    ||||| |||||||||||||| | ||||||||||| || || | |||||||||| ||||| | | |||||| |||||||||||||  || |||| ||||||    
T  31232370 tctctttaaaaagcttggtgccttcaactgagtttttaagtt-tatttataggcaaaaaatatgctctga-gtgcttctgatcacatcccaagcagtgga 31232273  T
Q  510 gaaaatgaagaaagtgg 526  Q
    |||||||||| ||||||    
T  31232272 gaaaatgaaggaagtgg 31232256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 61
Target Start/End: Complemental strand, 34657602 - 34657571
Alignment:
Q  30 cagcgaagcacaacaattacaagcaattggaa 61  Q
    ||||||||||||||||||||||||||||||||    
T  34657602 cagcgaagcacaacaattacaagcaattggaa 34657571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 15735748 - 15735706
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  15735748 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 15735706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 18484213 - 18484255
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  18484213 atcaaactccccaacacttgaatctttgcttgtcctcaagcaa 18484255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 20595832 - 20595874
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  20595832 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 20595874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 20602118 - 20602160
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  20602118 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 20602160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 20608409 - 20608451
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  20608409 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 20608451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 22317514 - 22317556
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  22317514 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 22317556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 25006809 - 25006851
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  25006809 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 25006851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 25116172 - 25116214
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  25116172 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 25116214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 25175262 - 25175304
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  25175262 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 25175304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 30759656 - 30759698
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  30759656 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 30759698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 1e-71; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 420 - 565
Target Start/End: Original strand, 11177716 - 11177861
Alignment:
Q  420 aaagcttggtgtcctcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatcatgtctcaagtagtggagaaaatgaag 519  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11177716 aaagcttggtgtcttcaactgagttcttcaggtctatttatagggaaaaatctgctctgaagtgcttctgatcatgtctcaagtagtggagaaaatgaag 11177815  T
Q  520 aaagtgggcaaactgcttctgaaacgtggggaaagaataggtcagg 565  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  11177816 aaagtgggcaaactgcttctgaaacgtggggaaagaataggtcagg 11177861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 653 - 716
Target Start/End: Original strand, 11177949 - 11178012
Alignment:
Q  653 gacgcgcggagacctttaaccgataaatacctgaaatagacacacactaccaacataacattgc 716  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11177949 gacgcgcggagacctttaaccgataaatacctgaaatagacacacactaccaacataacattgc 11178012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 411 - 562
Target Start/End: Complemental strand, 23046698 - 23046549
Alignment:
Q  411 tctctctaaaaagcttggtgtcctcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatcatg-tctcaagtagtgga 509  Q
    ||||||||| | |||||||||| ||||||||||||||||||| ||||||||||||||||||| |||| ||||| | ||||||||| ||||||  ||||||    
T  23046698 tctctctaatatgcttggtgtcttcaactgagttcttcaggtttatttatagggaaaaatctgctctcaagtgttcctgatcatgttctcaa-cagtgga 23046600  T
Q  510 gaaaatgaagaaagtgggcaaactgcttctgaaacgtggggaaagaataggtc 562  Q
    ||||||| || ||||| | ||||||||| | |||||| |||||||||| ||||    
T  23046599 gaaaatggaggaagtgagaaaactgctt-ttaaacgt-gggaaagaattggtc 23046549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 679 - 716
Target Start/End: Complemental strand, 23046440 - 23046403
Alignment:
Q  679 atacctgaaatagacacacactaccaacataacattgc 716  Q
    |||||||||||||||||||| |||||||||||||||||    
T  23046440 atacctgaaatagacacacaataccaacataacattgc 23046403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 3245589 - 3245631
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  3245589 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 3245631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 3339227 - 3339269
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  3339227 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 3339269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 4382960 - 4382918
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  4382960 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 4382918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 10546937 - 10546979
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  10546937 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 10546979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 10602473 - 10602515
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  10602473 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 10602515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 12160208 - 12160250
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  12160208 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 12160250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 12776535 - 12776577
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  12776535 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 12776577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 13001426 - 13001468
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  13001426 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 13001468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 13136211 - 13136253
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  13136211 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 13136253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 13504882 - 13504924
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  13504882 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 13504924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 14348589 - 14348631
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  14348589 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 14348631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 15946823 - 15946781
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  15946823 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 15946781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 20584317 - 20584275
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  20584317 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 20584275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 27356729 - 27356771
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  27356729 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 27356771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 1e-68; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 409 - 565
Target Start/End: Original strand, 19901798 - 19901954
Alignment:
Q  409 tttctctctaaaaagcttggtgtcctcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatcatgtctcaagtagtgg 508  Q
    ||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  19901798 tttctctctaaaatgcttggtgtattcaactgagttcttcaggtctatttatagggaaaaatctgctctgaagtgcttccgatcatgtctcaagtagtgg 19901897  T
Q  509 agaaaatgaagaaagtgggcaaactgcttctgaaacgtggggaaagaataggtcagg 565  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19901898 agaaaatgaagaaagtgggcaaactgcttctaaaacgtggggaaagaataggtcagg 19901954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 769 - 847
Target Start/End: Original strand, 19902157 - 19902235
Alignment:
Q  769 agtgcattttacgtgttatcaaactcccctacacttgaaccgttgcttgtcctcaagcaacttagcttgcatataaaaa 847  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19902157 agtgcattttacgtgttatcaaactcccctacacttgaaccgttgcttgtcctcaagcaacttagcttgcatataaaaa 19902235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 654 - 716
Target Start/End: Original strand, 19902043 - 19902105
Alignment:
Q  654 acgcgcggagacctttaaccgataaatacctgaaatagacacacactaccaacataacattgc 716  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19902043 acgcgcggagacctttaaccgataaatacctgaaatagacacacactaccaacataacattgc 19902105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 22102607 - 22102565
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  22102607 atcaaactcccctacacttgaatctttgcttgtcctcaagcaa 22102565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 716
Target Start/End: Complemental strand, 40755958 - 40755908
Alignment:
Q  666 ctttaaccgataaatacctgaaatagacacacactaccaacataacattgc 716  Q
    |||||||||| |||| ||||||||||||||||| ||||| |||||||||||    
T  40755958 ctttaaccgacaaatgcctgaaatagacacacaataccagcataacattgc 40755908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 11346954 - 11346996
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  11346954 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 11346996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 770 - 839
Target Start/End: Complemental strand, 19352544 - 19352475
Alignment:
Q  770 gtgcattttacgtgttatcaaactcccctacacttgaaccgttgcttgtc-ctcaagcaacttagcttgca 839  Q
    ||||||||| | | |||||||||||||| ||||||||||| |||||| |  ||||||||||||||||||||    
T  19352544 gtgcattttgcatcttatcaaactcccc-acacttgaaccattgcttatatctcaagcaacttagcttgca 19352475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 19767739 - 19767697
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  19767739 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 19767697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 20002329 - 20002287
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  20002329 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 20002287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 20038982 - 20039024
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  20038982 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 20039024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 20712648 - 20712606
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    ||||||||||||||||||| || | ||||||||||||||||||    
T  20712648 atcaaactcccctacacttaaatctttgcttgtcctcaagcaa 20712606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 21098795 - 21098837
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  21098795 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 21098837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 21104116 - 21104158
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  21104116 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 21104158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 21831231 - 21831189
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  21831231 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 21831189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 21843525 - 21843567
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  21843525 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 21843567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 22033556 - 22033598
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  22033556 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 22033598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 22099656 - 22099698
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  22099656 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 22099698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 22370157 - 22370115
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  22370157 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 22370115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1661 (Bit Score: 124; Significance: 2e-63; HSPs: 2)
Name: scaffold1661
Description:

Target: scaffold1661; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 434 - 565
Target Start/End: Original strand, 156 - 287
Alignment:
Q  434 tcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatcatgtctcaagtagtggagaaaatgaagaaagtgggcaaact 533  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  156 tcaactgagttcttcaggtctatttatagggaaaaatctgctctgaagtgcttctgatcatgtctcaagtagtggagaaaatgaagaaagtgggcaaact 255  T
Q  534 gcttctgaaacgtggggaaagaataggtcagg 565  Q
    |||||||||||||||| |||||||||||||||    
T  256 gcttctgaaacgtgggaaaagaataggtcagg 287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1661; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 653 - 716
Target Start/End: Original strand, 375 - 438
Alignment:
Q  653 gacgcgcggagacctttaaccgataaatacctgaaatagacacacactaccaacataacattgc 716  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  375 gacgcgcggagacctttaaccgataaatacctgaaatagacacacactaccaaaataacattgc 438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 124; Significance: 2e-63; HSPs: 7)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 434 - 565
Target Start/End: Original strand, 88646 - 88777
Alignment:
Q  434 tcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatcatgtctcaagtagtggagaaaatgaagaaagtgggcaaact 533  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  88646 tcaactgagttcttcaggtctatttatagggaaaaatctgctctgaagtgcttctgatcatgtctcaagtagtggagaaaatgaagaaagtgggcaaact 88745  T
Q  534 gcttctgaaacgtggggaaagaataggtcagg 565  Q
    |||||||||||||||| |||||||||||||||    
T  88746 gcttctgaaacgtgggaaaagaataggtcagg 88777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 769 - 856
Target Start/End: Original strand, 77374 - 77462
Alignment:
Q  769 agtgcattttacgtgttatcaaactcccctacacttgaaccgttgcttgtcctcaagcaacttagcttgcatat-aaaaacagtataat 856  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  77374 agtgcattttacgtgttatcaaactcccctacacttgaaccattgcttgtcctcaagcaacttagcttgcatataaaaaacagtataat 77462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 653 - 716
Target Start/End: Original strand, 88865 - 88928
Alignment:
Q  653 gacgcgcggagacctttaaccgataaatacctgaaatagacacacactaccaacataacattgc 716  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  88865 gacgcgcggagacctttaaccgataaatacctgaaatagacacacactaccagcataacattgc 88928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 653 - 716
Target Start/End: Original strand, 77258 - 77321
Alignment:
Q  653 gacgcgcggagacctttaaccgataaatacctgaaatagacacacactaccaacataacattgc 716  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  77258 gacgcgcggagacctttaactgataaatacctgaaatagacacacactaccagcataacattgc 77321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 385 - 470
Target Start/End: Original strand, 77047 - 77131
Alignment:
Q  385 ataagcagtctctaaataacatagtttctctctaaaaagcttggtgtcctcaactgagttcttcaggtctatttatagggaaaaat 470  Q
    ||||||||  ||||||||||| | ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  77047 ataagcagattctaaataacaaaatttctctctgaaaagcttgg-gtcttcaactgagttcttcaggtctatttatagggaaaaat 77131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 527 - 565
Target Start/End: Original strand, 77132 - 77170
Alignment:
Q  527 gcaaactgcttctgaaacgtggggaaagaataggtcagg 565  Q
    |||||||||||||||||||||||||||||||||||||||    
T  77132 gcaaactgcttctgaaacgtggggaaagaataggtcagg 77170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 123583 - 123541
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  123583 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 123541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1407 (Bit Score: 114; Significance: 2e-57; HSPs: 1)
Name: scaffold1407
Description:

Target: scaffold1407; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 316 - 492
Target Start/End: Original strand, 1239 - 1415
Alignment:
Q  316 aaaattgcaattaacaaaggttctgaaattgtaa-aattgtacgatagctaaacaaaagcttaaattacgataagcagtctctaaataacatagtttctc 414  Q
    |||||||||||| |||||||||||||| |||||| ||||||| ||||||||||||||||||| |||||| ||||||||| ||||||||||| ||||||||    
T  1239 aaaattgcaattcacaaaggttctgaagttgtaagaattgtatgatagctaaacaaaagcttgaattac-ataagcagtttctaaataacacagtttctc 1337  T
Q  415 tctaaaaagcttggtgtcctcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatc 492  Q
    |||||||||||||      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1338 tctaaaaagcttgcccctttcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatc 1415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 90; Significance: 5e-43; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 409 - 562
Target Start/End: Complemental strand, 3668 - 3515
Alignment:
Q  409 tttctctctaaaaagcttggtgtcctcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatcatgtctcaagtagtgg 508  Q
    ||||||||||||| ||||||| | | |||||||||| | ||||| ||||||||||   |||||| | |||||||||||||||||||||||||||||||||    
T  3668 tttctctctaaaatgcttggtattcacaactgagttttccaggtttatttataggctgaaatctgccctgaagtgcttctgatcatgtctcaagtagtgg 3569  T
Q  509 agaaaatgaagaaagtgggcaaactgcttctgaaacgtggggaaagaataggtc 562  Q
    |||||||| || ||||||||||||||||||||||| ||||||||||||| ||||    
T  3568 agaaaatggaggaagtgggcaaactgcttctgaaatgtggggaaagaattggtc 3515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 769 - 856
Target Start/End: Complemental strand, 3310 - 3222
Alignment:
Q  769 agtgcattttacgtgttatcaaactcccctacacttgaaccgttgcttgtcctcaagcaacttagcttgcatata-aaaacagtataat 856  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  3310 agtgcattttacgtgttaacaaactcccctacacttgaaccgttgcttgtcctcaagcaactttgcttgcatataaaaaacagtataat 3222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 661 - 716
Target Start/End: Complemental strand, 3417 - 3362
Alignment:
Q  661 gagacctttaaccgataaatacctgaaatagacacacactaccaacataacattgc 716  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||    
T  3417 gagacctttaactgataaatacctgaaatagacacacaataccagcataacattgc 3362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 87; Significance: 3e-41; HSPs: 2)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 395 - 537
Target Start/End: Complemental strand, 9751 - 9609
Alignment:
Q  395 tctaaataacatagtttctctctaaaaagcttggtgtcctcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatcat 494  Q
    ||||||||||| | ||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||    
T  9751 tctaaataacaaaatttctctctgaaaagcttggtgtcatcaactgagttcttcaagtctatttatagggaaaaatctgctttgaagtgcttctgatcat 9652  T
Q  495 gtctcaagtagtggagaaaatgaagaaagtgggcaaactgctt 537  Q
    ||  | |||||||||||||||| || ||||| | |||||||||    
T  9651 gttcctagtagtggagaaaatggaggaagtgagaaaactgctt 9609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 653 - 716
Target Start/End: Complemental strand, 9493 - 9430
Alignment:
Q  653 gacgcgcggagacctttaaccgataaatacctgaaatagacacacactaccaacataacattgc 716  Q
    ||||||||||||||| ||||| ||||||||| |||||||||||||| ||||| |||||||||||    
T  9493 gacgcgcggagacctataaccaataaatacccgaaatagacacacaataccagcataacattgc 9430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 81; Significance: 1e-37; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 413 - 557
Target Start/End: Original strand, 39139 - 39283
Alignment:
Q  413 tctctaaaaagcttggtgtcctcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatcatgtctcaagtagtggagaa 512  Q
    |||||| |||||||||| | | |||||||||| | || || ||||||||||   |||||| | |||||||||||||||||||||||||||||||||||||    
T  39139 tctctataaagcttggtattcacaactgagttttccaagtttatttataggctgaaatctgccctgaagtgcttctgatcatgtctcaagtagtggagaa 39238  T
Q  513 aatgaagaaagtgggcaaactgcttctgaaacgtggggaaagaat 557  Q
    |||| || ||||||||||||||||||||||| |||||||||||||    
T  39239 aatggaggaagtgggcaaactgcttctgaaatgtggggaaagaat 39283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 661 - 716
Target Start/End: Original strand, 39386 - 39441
Alignment:
Q  661 gagacctttaaccgataaatacctgaaatagacacacactaccaacataacattgc 716  Q
    |||||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||    
T  39386 gagaccttaaacagataaatacctgaaatagacacacaataccagcataacattgc 39441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 7e-36; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 409 - 534
Target Start/End: Complemental strand, 23689409 - 23689284
Alignment:
Q  409 tttctctctaaaaagcttggtgtcctcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatcatgtctcaagtagtgg 508  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||| |||||||  |||||||| ||||||||||    
T  23689409 tttctctctaaaaagcttggtgtcttcaactgagttcttcaggtctatttataggcaaaaatctcctttgaggtgcttcatatcatgtcccaagtagtgg 23689310  T
Q  509 agaaaatgaagaaagtgggcaaactg 534  Q
    |||| ||| || ||||| | ||||||    
T  23689309 agaatatggaggaagtgagaaaactg 23689284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 769 - 839
Target Start/End: Original strand, 17334589 - 17334659
Alignment:
Q  769 agtgcattttacgtgttatcaaactcccctacacttgaaccgttgcttgtcctcaagcaacttagcttgca 839  Q
    |||||||||| | |||||||||||||||| ||||||||||| ||| |||||||||||||| ||||||||||    
T  17334589 agtgcattttgcttgttatcaaactcccccacacttgaaccattgattgtcctcaagcaatttagcttgca 17334659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 774 - 828
Target Start/End: Original strand, 19805606 - 19805660
Alignment:
Q  774 attttacgtgttatcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    ||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  19805606 attttgcgtgttatcaaactcccccacactagaaccattgcttgtcctcaagcaa 19805660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 5500266 - 5500308
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  5500266 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 5500308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 22665276 - 22665234
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  22665276 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 22665234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 23159386 - 23159428
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  23159386 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 23159428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 23570643 - 23570685
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  23570643 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 23570685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 23644159 - 23644117
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  23644159 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 23644117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 24171560 - 24171518
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  24171560 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 24171518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 25144758 - 25144800
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  25144758 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 25144800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 25804268 - 25804310
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  25804268 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 25804310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 27631710 - 27631668
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  27631710 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 27631668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 27768817 - 27768859
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  27768817 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 27768859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 663 - 716
Target Start/End: Complemental strand, 23689162 - 23689109
Alignment:
Q  663 gacctttaaccgataaatacctgaaatagacacacactaccaacataacattgc 716  Q
    ||||||||||| |  |||| |||||||||||||||| ||||| |||||||||||    
T  23689162 gacctttaaccaacgaatatctgaaatagacacacaataccatcataacattgc 23689109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 75; Significance: 4e-34; HSPs: 2)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 420 - 562
Target Start/End: Complemental strand, 16251 - 16110
Alignment:
Q  420 aaagcttggtgtcctcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatcatgtctcaagtagtggagaaaatgaag 519  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||  | |||||||||||||||| ||    
T  16251 aaagcttggtgtcatcaactgagttcttcaggtctatttatagagaaaaatctgctttgaagtgcttctgatcatgttcctagtagtggagaaaatggag 16152  T
Q  520 aaagtgggcaaactgcttctgaaacgtggggaaagaataggtc 562  Q
     ||||| | ||||||||| | || ||| |||||||||| ||||    
T  16151 caagtgagaaaactgcttttcaatcgt-gggaaagaattggtc 16110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 653 - 716
Target Start/End: Complemental strand, 16017 - 15954
Alignment:
Q  653 gacgcgcggagacctttaaccgataaatacctgaaatagacacacactaccaacataacattgc 716  Q
    |||||||  ||||||||||||||||||||  ||||||||||||||| ||||| |||||||||||    
T  16017 gacgcgcaaagacctttaaccgataaatatttgaaatagacacacaataccagcataacattgc 15954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 316 - 492
Target Start/End: Complemental strand, 32609 - 32430
Alignment:
Q  316 aaaattgcaattaacaaaggttctgaaattgtaaa-attgtacgatagctaaac--aaaagcttaaattacgataagcagtct-ctaaataacatagttt 411  Q
    |||||||||||| |||||| ||||||| ||||||  |||||||||||||||||   |||||||| |||||| ||||||||| | ||||||| || |||||    
T  32609 aaaattgcaattcacaaagattctgaagttgtaaggattgtacgatagctaaaacaaaaagcttgaattac-ataagcagttttctaaatagcacagttt 32511  T
Q  412 ctctctaaaaagcttggtgtcctcaa-ctgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatc 492  Q
    |||||||||| ||||  | || ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32510 ctctctaaaa-gcttcttttcttctttctgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatc 32430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 782 - 828
Target Start/End: Original strand, 88357 - 88403
Alignment:
Q  782 tgttatcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  88357 tgttatcaaactcccctacacttgaaccattgcttgtcctcaagcaa 88403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 50507 - 50549
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  50507 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 50549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 434 - 516
Target Start/End: Original strand, 17951075 - 17951157
Alignment:
Q  434 tcaactgagttcttcaggtctatttatagggaaaaatctcctctgaagtgcttctgatcatgtctcaagtagtggagaaaatg 516  Q
    ||||||||||| |  |||| ||||||||||  |||||   |||||||||||||||||||||||| ||||||||||||||||||    
T  17951075 tcaactgagttttcaaggtttatttataggataaaattggctctgaagtgcttctgatcatgtcccaagtagtggagaaaatg 17951157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 782 - 828
Target Start/End: Original strand, 18478230 - 18478276
Alignment:
Q  782 tgttatcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  18478230 tgttatcaaactcccctacacttgaaccattgcttgtcctcaagcaa 18478276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 407 - 460
Target Start/End: Original strand, 7589078 - 7589131
Alignment:
Q  407 agtttctctctaaaaagcttggtgtcctcaactgagttcttcaggtctatttat 460  Q
    |||||||||||| ||||||||||| | |||| ||||||||||| ||||||||||    
T  7589078 agtttctctctagaaagcttggtgccttcaaatgagttcttcatgtctatttat 7589131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 7588755 - 7588791
Alignment:
Q  39 acaacaattacaagcaattggaactgaatgaaactcc 75  Q
    ||||||||||||||||||||||| |||||||||||||    
T  7588755 acaacaattacaagcaattggaattgaatgaaactcc 7588791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 17094602 - 17094644
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  17094602 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 17094644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 19364243 - 19364201
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  19364243 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 19364201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 20237670 - 20237628
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  20237670 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 20237628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 27047088 - 27047046
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  27047088 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 27047046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 52938622 - 52938664
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  52938622 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 52938664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 667 - 712
Target Start/End: Complemental strand, 24067981 - 24067936
Alignment:
Q  667 tttaaccgataaatacctgaaatagacacacactaccaacataaca 712  Q
    ||||| ||| |||| ||||||||||||||||| |||||||||||||    
T  24067981 tttaatcgacaaatgcctgaaatagacacacaataccaacataaca 24067936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 782 - 828
Target Start/End: Original strand, 31426 - 31472
Alignment:
Q  782 tgttatcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  31426 tgttatcaaactcccctaaacttgaaccattgcttgtcctcaagcaa 31472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 784 - 828
Target Start/End: Complemental strand, 172318 - 172274
Alignment:
Q  784 ttatcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||||| ||||||||| | ||||||||||||||||||    
T  172318 ttatcaaactcccccacacttgaatctttgcttgtcctcaagcaa 172274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 162057 - 162015
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  162057 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 162015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 1317 - 1275
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  1317 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 1275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 969 - 927
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  969 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0773 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0773
Description:

Target: scaffold0773; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 686 - 644
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  686 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0582 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 8868 - 8826
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  8868 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 8826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 2817 - 2775
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  2817 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 2775  T

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Target: scaffold0512 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 5294 - 5252
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  5294 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 5252  T

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Target: scaffold0375 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 12793 - 12751
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  12793 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 12751  T

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Target: scaffold0230 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 15892 - 15850
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  15892 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 15850  T

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Target: scaffold0156 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 1040 - 998
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  1040 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 998  T

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Target: scaffold0096 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 38509 - 38551
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  38509 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 38551  T

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Target: scaffold0056 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 42299 - 42257
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  42299 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 42257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 22817 - 22775
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  22817 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 22775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 121161 - 121119
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  121161 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 121119  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000008; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 2181268 - 2181226
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  2181268 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 2181226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 15699769 - 15699727
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  15699769 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 15699727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 18448348 - 18448306
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  18448348 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 18448306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 22165550 - 22165592
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  22165550 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 22165592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 22244026 - 22243984
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  22244026 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 22243984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 23023301 - 23023259
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  23023301 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 23023259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 25963456 - 25963414
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  25963456 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 25963414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Complemental strand, 25968103 - 25968061
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  25968103 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 25968061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 786 - 828
Target Start/End: Original strand, 30671808 - 30671850
Alignment:
Q  786 atcaaactcccctacacttgaaccgttgcttgtcctcaagcaa 828  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  30671808 atcaaactcccccacacttgaatctttgcttgtcctcaagcaa 30671850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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