View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0914_low_110 (Length: 205)
Name: NF0914_low_110
Description: NF0914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0914_low_110 |
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Alignment Details
Target: chr1 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 43144377 - 43144267
Alignment:
| Q |
1 |
caaaacttcatttaatcactaattaacgtatccttaattacaacccatactcaaataaaaagctattattaattatttgagtccaactattcataatttt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
43144377 |
caaaacttcatttaatcactaattaacgtatccttaattacaacccatactcaaataaaaagctattattaattatttgagtccaactattcataatttt |
43144278 |
T |
|
| Q |
101 |
actactattat |
111 |
Q |
| |
|
||||||||||| |
|
|
| T |
43144277 |
actactattat |
43144267 |
T |
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