View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0914_low_22 (Length: 449)
Name: NF0914_low_22
Description: NF0914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0914_low_22 |
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Alignment Details
Target: chr2 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 118 - 437
Target Start/End: Complemental strand, 39625342 - 39625023
Alignment:
| Q |
118 |
aaataatttgttcatcataccttgaaaggaatacatgagagattcatccccaacatgagatcttacttgatttgtcaatacaattggaatgcgtgaaaat |
217 |
Q |
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| T |
39625342 |
aaataatttgttcatcataccttgaaaggaatacatgagagattcatcaccaacatgagatcttacttgatttgtcaatacaattggaatgcgtgaaaat |
39625243 |
T |
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| Q |
218 |
tcagcaagtgacctgaactggttcaatatcagaacttccttcaagaagaaacatgtaatttcacttcataaaatctcacaagtggttcttacttgatgaa |
317 |
Q |
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| T |
39625242 |
tcagcaagtgacctgaactggttcaatatcagaacttccttcaagaagaaacatgtaatttcacttcataaaatctcacaagtggttcttacttgatgaa |
39625143 |
T |
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| Q |
318 |
agaaacgtgccaacccaatgcttgttgcctggaagccccacaatcatgttcactgaatagaaaaagtgaccaatttatatgcatcatgagacattatgag |
417 |
Q |
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| T |
39625142 |
agaaacgtgccaacccaatgcttgttgcctggaagccccacaatcatgttcactgaatagaaaaagtgaccaatttatatgcatcatgagacattatgag |
39625043 |
T |
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| Q |
418 |
taggagtatagcacgagaat |
437 |
Q |
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|||||||||||||||||||| |
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| T |
39625042 |
taggagtatagcacgagaat |
39625023 |
T |
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