View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0914_low_28 (Length: 401)

Name: NF0914_low_28
Description: NF0914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0914_low_28
NF0914_low_28
[»] chr5 (66 HSPs)
chr5 (1-307)||(35166159-35166463)
chr5 (2-169)||(3333848-3334015)
chr5 (1-170)||(27904629-27904798)
chr5 (1-100)||(2974702-2974801)
chr5 (1-100)||(12406186-12406285)
chr5 (1-102)||(9852853-9852954)
chr5 (5-102)||(25910790-25910887)
chr5 (1-88)||(3999244-3999331)
chr5 (1-172)||(37897864-37898034)
chr5 (1-171)||(22300599-22300768)
chr5 (1-102)||(20629890-20629991)
chr5 (1-102)||(31080543-31080644)
chr5 (1-102)||(40276175-40276276)
chr5 (1-101)||(20512264-20512364)
chr5 (299-355)||(35165880-35165936)
chr5 (1-102)||(32391865-32391966)
chr5 (4-93)||(34320096-34320185)
chr5 (1-173)||(36798166-36798338)
chr5 (3-88)||(43098175-43098260)
chr5 (5-90)||(25363904-25363989)
chr5 (1-68)||(6130404-6130470)
chr5 (2-101)||(16132812-16132911)
chr5 (3-102)||(30604235-30604334)
chr5 (1-168)||(39574240-39574403)
chr5 (16-102)||(19131661-19131747)
chr5 (58-171)||(36798379-36798492)
chr5 (1-101)||(24134436-24134536)
chr5 (1-73)||(26563084-26563156)
chr5 (1-101)||(26702504-26702603)
chr5 (1-101)||(26972237-26972336)
chr5 (79-170)||(12406040-12406131)
chr5 (5-102)||(18403053-18403150)
chr5 (1-44)||(4096576-4096619)
chr5 (1-44)||(10029217-10029260)
chr5 (1-88)||(19340910-19340997)
chr5 (1-44)||(35306847-35306890)
chr5 (1-44)||(35678229-35678272)
chr5 (1-44)||(39528891-39528934)
chr5 (1-102)||(24405557-24405657)
chr5 (5-86)||(28446087-28446168)
chr5 (25-90)||(40133079-40133143)
chr5 (1-49)||(8340105-8340153)
chr5 (1-49)||(28736560-28736608)
chr5 (1-44)||(3020739-3020782)
chr5 (1-44)||(4125589-4125632)
chr5 (1-44)||(7623665-7623708)
chr5 (1-44)||(8755138-8755181)
chr5 (16-71)||(10332147-10332202)
chr5 (1-44)||(11480180-11480223)
chr5 (1-44)||(16666698-16666741)
chr5 (1-44)||(22925763-22925806)
chr5 (1-44)||(28388126-28388169)
chr5 (1-44)||(28620164-28620207)
chr5 (1-44)||(31172690-31172733)
chr5 (1-44)||(33825725-33825768)
chr5 (1-44)||(34168933-34168976)
chr5 (1-44)||(34606515-34606558)
chr5 (1-44)||(34734218-34734261)
chr5 (1-44)||(35055902-35055945)
chr5 (1-44)||(40768013-40768056)
chr5 (1-44)||(42739732-42739775)
chr5 (1-44)||(42779313-42779356)
chr5 (1-44)||(42947526-42947569)
chr5 (1-43)||(16521280-16521322)
chr5 (8-49)||(24779393-24779434)
chr5 (1-34)||(31157048-31157081)
[»] chr3 (91 HSPs)
chr3 (1-170)||(51315630-51315799)
chr3 (2-166)||(44585933-44586097)
chr3 (1-102)||(44436544-44436645)
chr3 (5-102)||(1938383-1938480)
chr3 (9-98)||(35359067-35359156)
chr3 (2-102)||(54719144-54719244)
chr3 (1-180)||(36687737-36687920)
chr3 (1-102)||(3916496-3916597)
chr3 (1-90)||(14856702-14856791)
chr3 (1-102)||(19404540-19404641)
chr3 (1-102)||(33329763-33329864)
chr3 (1-102)||(43747426-43747527)
chr3 (1-102)||(48348405-48348505)
chr3 (7-168)||(54464163-54464324)
chr3 (1-101)||(8024928-8025028)
chr3 (1-88)||(7218297-7218384)
chr3 (1-168)||(1814703-1814866)
chr3 (1-102)||(20432330-20432432)
chr3 (1-91)||(46226775-46226865)
chr3 (1-90)||(578559-578648)
chr3 (1-102)||(28712521-28712622)
chr3 (1-102)||(36677657-36677758)
chr3 (25-170)||(49787249-49787394)
chr3 (1-89)||(86653-86741)
chr3 (1-97)||(25843437-25843533)
chr3 (26-102)||(44433235-44433311)
chr3 (5-102)||(28204636-28204733)
chr3 (1-169)||(38177178-38177344)
chr3 (1-102)||(3192839-3192941)
chr3 (1-67)||(14992777-14992843)
chr3 (5-102)||(14340884-14340981)
chr3 (5-102)||(27178297-27178394)
chr3 (5-90)||(44624703-44624787)
chr3 (34-102)||(38957913-38957981)
chr3 (5-98)||(52008313-52008408)
chr3 (9-73)||(53184605-53184668)
chr3 (1-51)||(12759654-12759704)
chr3 (1-67)||(36567020-36567086)
chr3 (1-44)||(44624371-44624414)
chr3 (5-87)||(4474150-4474231)
chr3 (28-90)||(15976316-15976378)
chr3 (5-102)||(47189744-47189841)
chr3 (55-171)||(14340731-14340847)
chr3 (1-44)||(257581-257624)
chr3 (1-44)||(787224-787267)
chr3 (2-93)||(791467-791558)
chr3 (1-44)||(2205674-2205717)
chr3 (1-44)||(3212297-3212340)
chr3 (1-44)||(5577058-5577101)
chr3 (1-44)||(8728056-8728099)
chr3 (1-44)||(9079943-9079986)
chr3 (1-44)||(9153622-9153665)
chr3 (1-44)||(9630893-9630936)
chr3 (1-44)||(10439411-10439454)
chr3 (1-44)||(10864240-10864283)
chr3 (1-44)||(19391780-19391823)
chr3 (2-49)||(25154301-25154348)
chr3 (1-44)||(25782798-25782841)
chr3 (1-44)||(27748369-27748412)
chr3 (1-44)||(27857280-27857323)
chr3 (1-44)||(28097569-28097612)
chr3 (43-102)||(28944095-28944154)
chr3 (1-44)||(28964299-28964342)
chr3 (1-44)||(30200559-30200602)
chr3 (1-44)||(30760956-30760999)
chr3 (1-44)||(31577544-31577587)
chr3 (1-44)||(32458928-32458971)
chr3 (1-44)||(33252630-33252673)
chr3 (1-44)||(33576554-33576597)
chr3 (1-44)||(33933492-33933535)
chr3 (1-44)||(37182144-37182187)
chr3 (1-44)||(38511802-38511845)
chr3 (1-44)||(41223637-41223680)
chr3 (1-44)||(41281992-41282035)
chr3 (1-44)||(42230176-42230219)
chr3 (1-44)||(44177412-44177455)
chr3 (1-44)||(44184096-44184139)
chr3 (1-44)||(47530464-47530507)
chr3 (1-44)||(50033386-50033429)
chr3 (1-44)||(51842926-51842969)
chr3 (1-44)||(51860458-51860501)
chr3 (1-44)||(53191086-53191129)
chr3 (1-44)||(53531951-53531994)
chr3 (2-44)||(5153927-5153969)
chr3 (1-43)||(33621992-33622034)
chr3 (2-44)||(49997802-49997844)
chr3 (121-170)||(25902401-25902450)
chr3 (9-102)||(43586715-43586808)
chr3 (18-71)||(46984980-46985033)
chr3 (4-44)||(7819058-7819098)
chr3 (4-44)||(22202609-22202649)
[»] chr8 (70 HSPs)
chr8 (1-170)||(30539137-30539305)
chr8 (5-102)||(21486721-21486818)
chr8 (1-171)||(23702281-23702450)
chr8 (1-102)||(29657770-29657872)
chr8 (1-166)||(22846446-22846611)
chr8 (2-166)||(41487357-41487520)
chr8 (11-102)||(37813247-37813338)
chr8 (1-172)||(29044693-29044862)
chr8 (8-102)||(39889926-39890020)
chr8 (1-102)||(6807315-6807416)
chr8 (6-167)||(26823828-26823989)
chr8 (2-102)||(3676275-3676375)
chr8 (5-169)||(45177201-45177365)
chr8 (5-102)||(32071165-32071262)
chr8 (1-102)||(25144009-25144110)
chr8 (9-92)||(29790834-29790917)
chr8 (1-102)||(16982757-16982857)
chr8 (1-102)||(20853443-20853544)
chr8 (1-102)||(27545408-27545507)
chr8 (111-170)||(23702122-23702181)
chr8 (111-170)||(28349563-28349622)
chr8 (1-71)||(9762298-9762368)
chr8 (16-102)||(37939978-37940063)
chr8 (5-102)||(22192448-22192545)
chr8 (1-73)||(33298435-33298507)
chr8 (1-44)||(5734330-5734373)
chr8 (1-44)||(8287749-8287792)
chr8 (1-44)||(37205686-37205729)
chr8 (1-51)||(35213175-35213225)
chr8 (9-90)||(14880414-14880495)
chr8 (29-102)||(41602549-41602622)
chr8 (2-86)||(521591-521675)
chr8 (4-44)||(6655426-6655466)
chr8 (4-44)||(6735828-6735868)
chr8 (1-49)||(20057124-20057172)
chr8 (1-44)||(414809-414852)
chr8 (1-44)||(995139-995182)
chr8 (1-44)||(1657531-1657574)
chr8 (1-44)||(1985714-1985757)
chr8 (1-44)||(4167346-4167389)
chr8 (1-44)||(6335474-6335517)
chr8 (1-44)||(6641743-6641786)
chr8 (1-44)||(6745139-6745182)
chr8 (1-44)||(14032160-14032203)
chr8 (1-44)||(15188074-15188117)
chr8 (1-44)||(20095832-20095875)
chr8 (26-101)||(20699366-20699441)
chr8 (1-44)||(23233925-23233968)
chr8 (1-44)||(28596055-28596098)
chr8 (1-44)||(32318630-32318673)
chr8 (1-44)||(36788405-36788448)
chr8 (1-44)||(36801521-36801564)
chr8 (1-44)||(37953499-37953542)
chr8 (1-44)||(38166609-38166652)
chr8 (1-44)||(39626113-39626156)
chr8 (1-44)||(39635663-39635706)
chr8 (1-44)||(41625585-41625628)
chr8 (1-44)||(41788776-41788819)
chr8 (1-43)||(16531394-16531436)
chr8 (1-43)||(20819899-20819941)
chr8 (1-38)||(17071053-17071090)
chr8 (1-38)||(17577182-17577219)
chr8 (111-172)||(37813159-37813220)
chr8 (1-44)||(3411526-3411570)
chr8 (112-172)||(17070904-17070964)
chr8 (112-172)||(17577308-17577368)
chr8 (29-73)||(18093005-18093049)
chr8 (7-55)||(41567087-41567135)
chr8 (26-86)||(44269290-44269350)
chr8 (1-41)||(45209104-45209144)
[»] chr4 (90 HSPs)
chr4 (1-170)||(1420690-1420859)
chr4 (6-171)||(2016789-2016954)
chr4 (3-102)||(54983981-54984080)
chr4 (1-102)||(6637209-6637310)
chr4 (6-178)||(51362527-51362702)
chr4 (1-169)||(20112296-20112463)
chr4 (1-170)||(53312285-53312455)
chr4 (1-170)||(2654115-2654283)
chr4 (1-86)||(4796186-4796271)
chr4 (1-169)||(14449430-14449599)
chr4 (1-102)||(51371530-51371631)
chr4 (1-172)||(12719591-12719763)
chr4 (1-92)||(43074734-43074825)
chr4 (4-102)||(10059846-10059944)
chr4 (5-102)||(16292335-16292432)
chr4 (4-102)||(31553391-31553489)
chr4 (1-171)||(23759720-23759889)
chr4 (1-170)||(25909486-25909655)
chr4 (1-87)||(34567762-34567848)
chr4 (1-102)||(2836966-2837067)
chr4 (1-102)||(21597548-21597649)
chr4 (5-170)||(44356548-44356711)
chr4 (1-49)||(6614990-6615038)
chr4 (11-98)||(8965672-8965759)
chr4 (1-175)||(49185565-49185737)
chr4 (1-102)||(21451525-21451625)
chr4 (5-102)||(21871537-21871634)
chr4 (5-102)||(21927398-21927495)
chr4 (1-102)||(35383905-35384006)
chr4 (1-102)||(47999596-47999697)
chr4 (5-101)||(29697590-29697685)
chr4 (28-102)||(6207347-6207421)
chr4 (8-98)||(53924904-53924994)
chr4 (1-67)||(54855405-54855471)
chr4 (2-170)||(11824187-11824354)
chr4 (1-88)||(21322857-21322944)
chr4 (1-167)||(51233483-51233648)
chr4 (1-166)||(50769366-50769531)
chr4 (25-90)||(14060873-14060938)
chr4 (1-86)||(27978774-27978859)
chr4 (1-73)||(8070721-8070793)
chr4 (1-44)||(5344395-5344438)
chr4 (1-44)||(22159974-22160017)
chr4 (1-44)||(35083726-35083769)
chr4 (1-44)||(51537761-51537804)
chr4 (1-44)||(54607012-54607055)
chr4 (5-83)||(1571481-1571559)
chr4 (1-47)||(42526109-42526155)
chr4 (1-102)||(26089537-26089637)
chr4 (26-102)||(14016792-14016868)
chr4 (5-85)||(20118053-20118133)
chr4 (1-44)||(104325-104368)
chr4 (1-44)||(232837-232880)
chr4 (1-44)||(6386856-6386899)
chr4 (1-44)||(7119719-7119762)
chr4 (1-44)||(7666343-7666386)
chr4 (1-44)||(7705715-7705758)
chr4 (1-44)||(8891779-8891822)
chr4 (1-44)||(17554170-17554213)
chr4 (1-44)||(28982038-28982081)
chr4 (1-44)||(29432192-29432235)
chr4 (1-44)||(31250603-31250646)
chr4 (1-44)||(34158618-34158661)
chr4 (1-44)||(37973638-37973681)
chr4 (1-44)||(39946223-39946266)
chr4 (1-44)||(40350961-40351004)
chr4 (1-44)||(41205641-41205684)
chr4 (1-44)||(41707843-41707886)
chr4 (1-44)||(44921739-44921782)
chr4 (5-44)||(51696661-51696700)
chr4 (1-44)||(52114260-52114303)
chr4 (1-44)||(52310947-52310990)
chr4 (1-44)||(54216102-54216145)
chr4 (1-44)||(55586741-55586784)
chr4 (2-44)||(8483006-8483048)
chr4 (2-44)||(17221427-17221469)
chr4 (2-44)||(20466510-20466552)
chr4 (2-44)||(20473836-20473878)
chr4 (2-44)||(28159146-28159188)
chr4 (29-71)||(39907257-39907299)
chr4 (7-44)||(51537583-51537620)
chr4 (5-102)||(52462938-52463034)
chr4 (58-102)||(2837103-2837147)
chr4 (1-49)||(18937386-18937434)
chr4 (1-49)||(34771418-34771466)
chr4 (1-45)||(35835922-35835966)
chr4 (29-101)||(37831660-37831732)
chr4 (4-44)||(38371412-38371452)
chr4 (1-41)||(39136442-39136482)
chr4 (34-102)||(52865447-52865515)
[»] chr1 (76 HSPs)
chr1 (5-173)||(3377497-3377665)
chr1 (1-171)||(7579661-7579832)
chr1 (1-90)||(41997787-41997876)
chr1 (1-172)||(17760679-17760852)
chr1 (1-102)||(16874649-16874750)
chr1 (1-102)||(23220633-23220734)
chr1 (1-101)||(44672380-44672480)
chr1 (1-98)||(16298203-16298300)
chr1 (1-102)||(39642354-39642455)
chr1 (1-102)||(45739002-45739103)
chr1 (1-128)||(50401412-50401538)
chr1 (6-167)||(1096469-1096630)
chr1 (1-102)||(12960991-12961092)
chr1 (1-102)||(14190688-14190789)
chr1 (1-102)||(14978863-14978964)
chr1 (1-98)||(25486285-25486381)
chr1 (5-86)||(49426143-49426223)
chr1 (1-102)||(50226537-50226638)
chr1 (6-102)||(6569658-6569754)
chr1 (1-169)||(32295099-32295267)
chr1 (2-85)||(5287374-5287457)
chr1 (3-102)||(18632382-18632481)
chr1 (1-102)||(25085539-25085640)
chr1 (1-90)||(44436836-44436924)
chr1 (1-102)||(46572893-46572992)
chr1 (1-73)||(20224677-20224749)
chr1 (3-101)||(16545628-16545726)
chr1 (1-71)||(46912337-46912407)
chr1 (1-102)||(15659137-15659238)
chr1 (1-102)||(30849376-30849477)
chr1 (3-50)||(7060787-7060834)
chr1 (7-102)||(8301497-8301592)
chr1 (1-44)||(33811550-33811593)
chr1 (1-44)||(34988215-34988258)
chr1 (1-44)||(52149642-52149685)
chr1 (7-101)||(17692794-17692887)
chr1 (29-71)||(46351232-46351274)
chr1 (17-74)||(23891797-23891854)
chr1 (1-70)||(46505316-46505385)
chr1 (1-102)||(48319470-48319571)
chr1 (5-44)||(14887-14926)
chr1 (1-44)||(2371301-2371344)
chr1 (1-44)||(4243255-4243298)
chr1 (1-44)||(6183107-6183150)
chr1 (1-44)||(8029084-8029127)
chr1 (1-44)||(13791701-13791744)
chr1 (1-44)||(15161443-15161486)
chr1 (1-44)||(20017507-20017550)
chr1 (1-44)||(20287893-20287936)
chr1 (1-44)||(28503260-28503303)
chr1 (1-44)||(31797210-31797253)
chr1 (1-44)||(32558357-32558400)
chr1 (1-44)||(33871019-33871062)
chr1 (1-44)||(34867626-34867669)
chr1 (1-44)||(37029053-37029096)
chr1 (1-44)||(38622528-38622571)
chr1 (1-44)||(41585410-41585453)
chr1 (1-44)||(42407008-42407051)
chr1 (1-44)||(43914703-43914746)
chr1 (1-44)||(45885094-45885137)
chr1 (2-49)||(46880889-46880936)
chr1 (1-44)||(47113513-47113556)
chr1 (1-44)||(47764216-47764259)
chr1 (1-44)||(49056249-49056292)
chr1 (1-71)||(49227261-49227331)
chr1 (25-71)||(5225522-5225568)
chr1 (2-44)||(8770609-8770651)
chr1 (2-44)||(8774422-8774464)
chr1 (2-44)||(23792928-23792970)
chr1 (25-71)||(50877727-50877773)
chr1 (2-44)||(52363325-52363367)
chr1 (1-49)||(6320683-6320729)
chr1 (16-69)||(35544843-35544896)
chr1 (113-169)||(3377769-3377825)
chr1 (17-101)||(8009796-8009880)
chr1 (4-44)||(26861399-26861439)
[»] chr2 (65 HSPs)
chr2 (1-169)||(39918434-39918602)
chr2 (2-172)||(43028791-43028960)
chr2 (1-170)||(5470483-5470650)
chr2 (1-178)||(14489205-14489381)
chr2 (1-102)||(37431610-37431711)
chr2 (1-171)||(34679095-34679265)
chr2 (1-102)||(2609235-2609336)
chr2 (1-172)||(14943691-14943860)
chr2 (1-170)||(25333498-25333666)
chr2 (10-102)||(32969624-32969716)
chr2 (1-102)||(5362321-5362423)
chr2 (5-171)||(44617889-44618053)
chr2 (1-90)||(6592805-6592894)
chr2 (5-102)||(37803190-37803286)
chr2 (1-91)||(24472593-24472683)
chr2 (1-102)||(8553690-8553790)
chr2 (5-102)||(27489499-27489596)
chr2 (5-102)||(34760914-34761011)
chr2 (1-86)||(41196376-41196461)
chr2 (1-101)||(6510068-6510167)
chr2 (1-87)||(5008434-5008520)
chr2 (1-102)||(31827592-31827694)
chr2 (5-86)||(24306169-24306250)
chr2 (1-101)||(8857114-8857214)
chr2 (2-86)||(19895761-19895845)
chr2 (1-68)||(4576689-4576756)
chr2 (2-101)||(25411609-25411708)
chr2 (1-56)||(18709401-18709456)
chr2 (1-48)||(34100872-34100919)
chr2 (2-49)||(36195726-36195773)
chr2 (1-90)||(15022916-15023006)
chr2 (1-47)||(19206294-19206340)
chr2 (1-102)||(4925506-4925607)
chr2 (9-102)||(35718712-35718805)
chr2 (58-171)||(43028997-43029109)
chr2 (1-170)||(19399323-19399490)
chr2 (1-44)||(42445497-42445540)
chr2 (18-71)||(35921029-35921082)
chr2 (111-171)||(25378-25438)
chr2 (38-102)||(36177045-36177109)
chr2 (1-44)||(2936934-2936977)
chr2 (1-44)||(7464084-7464127)
chr2 (1-44)||(19025962-19026005)
chr2 (1-44)||(19256713-19256756)
chr2 (59-102)||(21361947-21361990)
chr2 (1-44)||(21552686-21552729)
chr2 (1-44)||(21568050-21568093)
chr2 (1-44)||(24858021-24858064)
chr2 (1-44)||(25888036-25888079)
chr2 (1-44)||(31784396-31784439)
chr2 (13-88)||(32013218-32013293)
chr2 (1-44)||(38731424-38731467)
chr2 (1-44)||(39620693-39620736)
chr2 (1-44)||(40493771-40493814)
chr2 (1-44)||(40711482-40711525)
chr2 (1-44)||(45395384-45395427)
chr2 (36-102)||(16043203-16043269)
chr2 (26-68)||(16238393-16238435)
chr2 (25-71)||(42274693-42274739)
chr2 (61-102)||(25452-25493)
chr2 (53-102)||(14489410-14489459)
chr2 (18-71)||(14983364-14983417)
chr2 (5-102)||(18969244-18969341)
chr2 (18-71)||(23686663-23686716)
chr2 (1-41)||(24205441-24205481)
[»] chr7 (65 HSPs)
chr7 (1-170)||(15107138-15107304)
chr7 (14-167)||(47909696-47909848)
chr7 (5-173)||(36580425-36580592)
chr7 (1-102)||(18504310-18504411)
chr7 (26-179)||(28350106-28350259)
chr7 (1-102)||(6726401-6726501)
chr7 (1-90)||(36903341-36903430)
chr7 (1-170)||(35250118-35250286)
chr7 (9-102)||(15029128-15029220)
chr7 (1-166)||(29834297-29834462)
chr7 (1-102)||(28785901-28786002)
chr7 (1-166)||(18186597-18186763)
chr7 (17-102)||(3381929-3382013)
chr7 (1-86)||(8073957-8074042)
chr7 (5-102)||(14247455-14247552)
chr7 (1-90)||(15348029-15348118)
chr7 (26-102)||(20184984-20185060)
chr7 (5-170)||(41243643-41243806)
chr7 (3-101)||(17931878-17931976)
chr7 (1-168)||(28472391-28472555)
chr7 (25-170)||(3318317-3318460)
chr7 (13-102)||(23826086-23826175)
chr7 (1-73)||(4049805-4049877)
chr7 (1-49)||(44312889-44312937)
chr7 (1-86)||(19644885-19644970)
chr7 (17-90)||(28350307-28350379)
chr7 (2-98)||(5172582-5172678)
chr7 (5-165)||(21505768-21505927)
chr7 (79-166)||(6792020-6792107)
chr7 (13-92)||(20505147-20505226)
chr7 (1-71)||(10350951-10351021)
chr7 (111-180)||(4049977-4050046)
chr7 (25-101)||(17876237-17876313)
chr7 (4-44)||(25036181-25036221)
chr7 (6-46)||(40872317-40872357)
chr7 (1-44)||(497257-497300)
chr7 (1-44)||(930833-930876)
chr7 (1-44)||(5096912-5096955)
chr7 (1-44)||(7195581-7195624)
chr7 (1-44)||(7974514-7974557)
chr7 (1-44)||(10319037-10319080)
chr7 (1-44)||(17757908-17757951)
chr7 (1-44)||(18073960-18074003)
chr7 (1-44)||(18295977-18296020)
chr7 (1-44)||(21917232-21917275)
chr7 (1-44)||(23740410-23740453)
chr7 (1-44)||(24236239-24236282)
chr7 (1-44)||(25987068-25987111)
chr7 (1-44)||(26612467-26612510)
chr7 (1-44)||(30757370-30757413)
chr7 (1-44)||(34288173-34288216)
chr7 (1-44)||(35121537-35121580)
chr7 (1-44)||(35437331-35437374)
chr7 (1-44)||(35711802-35711845)
chr7 (1-44)||(36376185-36376228)
chr7 (1-44)||(38053271-38053314)
chr7 (1-44)||(39753996-39754039)
chr7 (1-44)||(39976854-39976897)
chr7 (1-44)||(42997197-42997240)
chr7 (1-44)||(47731827-47731870)
chr7 (29-71)||(31530072-31530114)
chr7 (29-102)||(9500075-9500148)
chr7 (61-98)||(42256655-42256692)
chr7 (29-102)||(48058928-48059000)
chr7 (8-44)||(10312379-10312415)
[»] chr6 (37 HSPs)
chr6 (1-102)||(26311550-26311651)
chr6 (1-171)||(30349347-30349516)
chr6 (5-100)||(5003229-5003324)
chr6 (1-170)||(10727340-10727509)
chr6 (9-170)||(33399785-33399944)
chr6 (1-85)||(11351719-11351803)
chr6 (1-90)||(6036806-6036895)
chr6 (1-102)||(17532318-17532418)
chr6 (5-101)||(266262-266357)
chr6 (25-102)||(2853585-2853662)
chr6 (4-89)||(3812820-3812904)
chr6 (1-102)||(20474851-20474951)
chr6 (5-101)||(32143326-32143422)
chr6 (3-102)||(239093-239194)
chr6 (1-101)||(1377275-1377375)
chr6 (1-101)||(1385023-1385123)
chr6 (5-67)||(18031092-18031154)
chr6 (1-46)||(2203286-2203331)
chr6 (1-44)||(2565224-2565267)
chr6 (1-44)||(3194581-3194624)
chr6 (1-44)||(5606421-5606464)
chr6 (1-44)||(6261506-6261549)
chr6 (1-44)||(7324780-7324823)
chr6 (1-44)||(7391622-7391665)
chr6 (1-44)||(11615023-11615066)
chr6 (1-44)||(12256889-12256932)
chr6 (1-44)||(16765166-16765209)
chr6 (1-44)||(21008891-21008934)
chr6 (1-44)||(23291401-23291444)
chr6 (1-44)||(27223454-27223497)
chr6 (1-44)||(31951330-31951373)
chr6 (2-44)||(15711782-15711824)
chr6 (5-71)||(27771363-27771429)
chr6 (5-46)||(16735690-16735731)
chr6 (1-46)||(30965814-30965859)
chr6 (19-71)||(24119590-24119642)
chr6 (5-101)||(26601528-26601624)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-102)||(19175-19276)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-102)||(9478-9579)
[»] scaffold0248 (1 HSPs)
scaffold0248 (5-102)||(470-567)
[»] scaffold0137 (1 HSPs)
scaffold0137 (5-102)||(19980-20077)
[»] scaffold0015 (2 HSPs)
scaffold0015 (5-102)||(76929-77025)
scaffold0015 (58-102)||(77064-77108)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-102)||(145420-145521)
[»] scaffold0578 (1 HSPs)
scaffold0578 (1-87)||(3157-3243)
[»] scaffold0372 (1 HSPs)
scaffold0372 (1-102)||(190-290)
[»] scaffold0062 (1 HSPs)
scaffold0062 (8-101)||(46228-46321)
[»] scaffold0417 (1 HSPs)
scaffold0417 (5-77)||(9429-9501)
[»] scaffold0194 (1 HSPs)
scaffold0194 (2-102)||(25047-25146)
[»] scaffold0515 (1 HSPs)
scaffold0515 (111-170)||(3638-3697)
[»] scaffold0306 (1 HSPs)
scaffold0306 (111-170)||(3638-3697)
[»] scaffold0122 (1 HSPs)
scaffold0122 (1-44)||(29796-29839)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-44)||(79115-79158)
[»] scaffold0809 (1 HSPs)
scaffold0809 (1-86)||(2907-2991)
[»] scaffold0041 (1 HSPs)
scaffold0041 (6-46)||(93925-93965)
[»] scaffold0864 (1 HSPs)
scaffold0864 (1-44)||(2769-2812)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-44)||(10082-10125)
[»] scaffold0150 (2 HSPs)
scaffold0150 (43-166)||(9558-9676)
scaffold0150 (25-98)||(9707-9779)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-44)||(20771-20814)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-44)||(81448-81491)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-44)||(139320-139363)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-44)||(400830-400873)
[»] scaffold0166 (1 HSPs)
scaffold0166 (8-49)||(21776-21817)
[»] scaffold0016 (1 HSPs)
scaffold0016 (38-90)||(203359-203411)


Alignment Details
Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 35166463 - 35166159
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||    
T  35166463 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattgaaggccaaaaccgccacatgtgcaaaacttagggggcgattttgt 35166364  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcctttaatttatatcactagattataatttaat 200  Q
    ||        ||||||||  ||||||||  | ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  35166363 agttttttt-cttagggggtcaaaatcgcaattttggaaaagttaaagg-ctaaaactgctattaagcctttaatttatatcactaaattataatttaat 35166266  T
Q  201 tatgtannnnnnnnggtaaatttataatttatttatgttaatatttactctatttgatgttgcatctcttagaaatatactaatgtattctttaacaaat 300  Q
    ||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35166265 tatgtattttttttggtaaatttataatttatttatgttaatatttactctatttgatgttgcatctcttagaaatatactaatgtattctttaacaaat 35166166  T
Q  301 aatttta 307  Q
    |||||||    
T  35166165 aatttta 35166159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 2 - 169
Target Start/End: Original strand, 3333848 - 3334015
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||| |||| ||||||||||||||||| || |||||||| || ||| |||||||    
T  3333848 tggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgggggccaaaactgccacatatgcaaaacttatggagcggttttgta 3333947  T
Q  102 gnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcc 169  Q
    |        |||||||| |||||||||  ||||||| |||||||  ||||||||||||||||||||||    
T  3333948 gtttttcttcttagggggccaaaatcgcaactttggaaaagttagggggctaaaactactattaagcc 3334015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 27904629 - 27904798
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||   |||| || ||||||||||||| ||| ||||||||||||||| ||||||    
T  27904629 gtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggtcttgggggacaaaactgccacaagtgcaaaacttagggggcggttttgt 27904728  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    ||        |||| ||| |||||||||  ||||||  ||||||| |||||||||||| |||||||||||    
T  27904729 agttttttttcttacggggccaaaatcgcaactttgaaaaagttagagggctaaaactgctattaagcct 27904798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 2974801 - 2974702
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| |||||| ||||||||||||||||  || ||||||||||||||| ||||||    
T  2974801 gtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggcattgggggccaaaactgccacagatgcaaaacttagggggcggttttgt 2974702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 12406186 - 12406285
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||| | |||| ||||||||||||||||  |||||||||||||||||| ||||||    
T  12406186 gtggcacctcacttagggtgccacgtcagcgtagactgagtcaaaattggccttgggggccaaaactgccacagatgtaaaacttagggggcggttttgt 12406285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 9852954 - 9852853
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || ||||||||||| | ||||||||||| | ||||  |||||||||||||||  || ||||||||||||||||||||||    
T  9852954 gtggcacctcacttagggtgccacgtcagcgtagatcaagtcaaaattggccttgggagccaaaactgccacagatgcaaaacttagggggcgattttgt 9852855  T
Q  101 ag 102  Q
    ||    
T  9852854 ag 9852853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 25910887 - 25910790
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||||||| || ||||||||||||||||||||||||||| |||| |||||||||||||||| ||| |||| |||| ||| | ||||||||    
T  25910887 cacctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgggggccaaaactgccacaggtgcaaaatttagagggtggttttgtag 25910790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3999244 - 3999331
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagg 88  Q
    ||||||||||||||| |||| || ||||||||||||| ||||||||||| | |||| ||||||||||||||||| |||||||||||||    
T  3999244 gtggcacctcacttaaggtgccacgtcagcgtagaccaagtcaaaattggccttgggggccaaaactgccacatatgtaaaacttagg 3999331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 37897864 - 37898034
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||| ||||||||| ||||  | |||||| ||||||||||||||||||   |||||||||||||||||||||| || |||||||| |||||| ||||||    
T  37897864 gtggcgcctcacttaaggtgctacgtcagcatagaccgagtcaaaattggtcttggaggccaaaactgccacatatgcaaaactta-ggggcggttttgt 37897962  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagccttt 172  Q
    ||        |||||||| |||||||||  ||||||  |||||||  ||||||||||| |||||||| ||||    
T  37897963 agttttttttcttagggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaaggcttt 37898034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 22300768 - 22300599
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || |||| ||||||||||||||||||||   ||||| | |||||||||||||| |  |||||||| ||| || ||||||    
T  22300768 gtggcacctcacttagggtgccacgtcaacgtagaccgagtcaaaattggtcttggaagtcaaaactgccacatatacaaaacttaagggacggttttgt 22300669  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcctt 171  Q
    ||         ||||||  |||||||||  ||||| | ||||||| |||||||||||||||||||||||||    
T  22300668 agtttttttt-ttagggtgccaaaatcgcaactttagaaaagttagagggctaaaactactattaagcctt 22300599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 20629890 - 20629991
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || ||||||||||| |||||||||||||    |||||||||||||| |||||  || ||||||||||||||| ||||||    
T  20629890 gtggcacctcacttagggtgccacgtcagcgtagatcgagtcaaaattggtcctggaggccaaaacttccacaaatgcaaaacttagggggcggttttgt 20629989  T
Q  101 ag 102  Q
    ||    
T  20629990 ag 20629991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 31080644 - 31080543
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || |||||| |||||||||| ||||||| | |||| ||||||||||||||||  || ||||||||||||| | ||||||    
T  31080644 gtggcacctcacttagggtgccacgtcagcatagaccgagttaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggtggttttgt 31080545  T
Q  101 ag 102  Q
    ||    
T  31080544 ag 31080543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 40276175 - 40276276
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||  | |||| || ||||| |||||||| || |||||||||||| || ||||||    
T  40276175 gtggcacctcacttagggtgtcacgtcagcgtagaccgggtcaaaattagccttgggggtcaaaattgccacatatgcaaaacttaggggacggttttgt 40276274  T
Q  101 ag 102  Q
    ||    
T  40276275 ag 40276276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 20512364 - 20512264
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||   |||| || ||||||| ||||| ||| ||||||||||||||  ||||||    
T  20512364 gtggcacctcacttagggtgccatgttagcgtagaccgagtcaaaattggtcttgggggtcaaaactaccacaggtgcaaaacttagggggcagttttgt 20512265  T
Q  101 a 101  Q
    |    
T  20512264 a 20512264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 299 - 355
Target Start/End: Complemental strand, 35165936 - 35165880
Alignment:
Q  299 ataattttattaagtaaacccatattaaaatgacaccaaatgtttttcatctcactc 355  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  35165936 ataattttattaagtaaacccatattaaaatgacaccaaatgtttttcatttcactc 35165880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 32391865 - 32391966
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||   ||||| | |||||||| ||||  || |||||||| |||||| ||||||    
T  32391865 gtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggtcttggatgtcaaaactgtcacacatgcaaaacttaaggggcggttttgt 32391964  T
Q  101 ag 102  Q
    ||    
T  32391965 ag 32391966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 34320096 - 34320185
Alignment:
Q  4 gcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcg 93  Q
    ||||| |||| |||||| || ||||| ||||||| ||||||||||||| |||| ||||||||||||||||  ||||||||||||||||||    
T  34320096 gcaccccactaagggtgccacgtcagtgtagaccaagtcaaaattgactttgggggccaaaactgccacaaatgtaaaacttagggggcg 34320185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 36798338 - 36798166
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||| ||| || ||||| |||||||||||| ||||||   |||| ||||||||||||||||  || ||||||||||||| | ||||||    
T  36798338 gtggcacctcacttagagtgccacgtcagtgtagaccgagtc-aaattggtcttgggggccaaaactgccacagatgcaaaacttagggggtggttttgt 36798240  T
Q  101 ag-nnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagccttta 173  Q
    ||         |||||||| ||||||| |  ||||||| |||||||| || |||||||| ||||||||||||||    
T  36798239 agtttttttttcttagggggccaaaattgcaactttggaaaagttaagggtctaaaactgctattaagccttta 36798166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 43098175 - 43098260
Alignment:
Q  3 ggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagg 88  Q
    |||||||||||||||||| || |||||||||||| ||||||||||||| || || |||||||||||| ||| ||| ||||||||||    
T  43098175 ggcacctcacttagggtgccacgtcagcgtagactgagtcaaaattgatatcgggggccaaaactgctacaggtgcaaaacttagg 43098260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 25363989 - 25363904
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggg 90  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||||||| || | |||||||||| |||||  || ||||||||||||    
T  25363989 cacctcatttagggtgtcacgtcagcgtagaccgaatcaaaattgacttttggggccaaaactaccacaattgcaaaacttagggg 25363904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6130404 - 6130470
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactg 68  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||||||| |||| |||||||||||    
T  6130404 gtggcacctcacttagggtgtcacgtcaacatagaccgagtcaaaattgaccttgg-ggccaaaactg 6130470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 16132911 - 16132812
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    |||||||||||||||| || ||  |||||||||||  ||||||||||| | |||| | |||||||||||| | ||| ||||||||||||||| |||||||    
T  16132911 tggcacctcacttaggatgccacatcagcgtagacaaagtcaaaattggccttggggaccaaaactgccataggtgcaaaacttagggggcggttttgta 16132812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 30604235 - 30604334
Alignment:
Q  3 ggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||||||||| || |||||||||||| |||||||||||| | |    |  ||||||||||||| ||| ||||||||||||||| ||||||||    
T  30604235 ggcacctcacttagggtgccacgtcagcgtagacagagtcaaaattggcctacaggtgcaaaactgccacaggtgcaaaacttagggggcggttttgtag 30604334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 39574403 - 39574240
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||| ||||||| ||||||| |||||||||||||||||| ||||||   |||| ||||||||||||||||  || ||||||||||||| |||||| |    
T  39574403 gtggcacgtcacttatggtgtcacgtcagcgtagaccgagtc-aaattggtcttgggggccaaaactgccaca--tgcaaaacttagggggtgattttat 39574307  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagc 168  Q
    ||        |||||||  |||||||||  |||| | |||||||| ||||| |||||| |||||||||    
T  39574306 ag-tttttttcttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaagc 39574240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 19131661 - 19131747
Alignment:
Q  16 gggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||| || ||||||||||||||||||||||||| | || | ||||||||||| ||||  || ||||||||||||||| ||||||||    
T  19131661 gggtgccacgtcagcgtagaccgagtcaaaattggccttcggggccaaaactgtcacagatgcaaaacttagggggcggttttgtag 19131747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 36798379 - 36798492
Alignment:
Q  58 ggccaaaactgccacatgtgtaaaacttagggggcgattttgtagnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaac 157  Q
    |||||||||||| |||  || ||||||||||||||| ||||| ||        ||||||||||||||||||  |||||| ||||||||  ||||||||||    
T  36798379 ggccaaaactgctacagttgcaaaacttagggggcggttttgcagttttttttcttaggggaccaaaatcgcaactttgagaaagttagggggctaaaac 36798478  T
Q  158 tactattaagcctt 171  Q
    | ||||||||||||    
T  36798479 tgctattaagcctt 36798492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 24134536 - 24134436
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||  ||  ||||||||| |||||||||||||| || ||||||  ||| |||||| ||||| ||| ||||||||||||||  ||||||    
T  24134536 gtggcacctcacttaaagtaccatgtcagcatagaccgagtcaaagttaacattgagggctaaaactaccacaagtggaaaacttagggggcagttttgt 24134437  T
Q  101 a 101  Q
    |    
T  24134436 a 24134436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26563156 - 26563084
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccaca 73  Q
    |||||||||||| ||||||| || ||||||| | ||||||||||||||||| |||| |||||||| |||||||    
T  26563156 gtggcacctcacgtagggtgccacgtcagcggaaaccgagtcaaaattgaccttgggggccaaaattgccaca 26563084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 26702603 - 26702504
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || |||||  |||||||| |||||||||   |||| ||||||||||||||||  || ||||||| ||||||| ||||||    
T  26702603 gtggcacctcacttagggtgccacgtcaggatagaccgaatcaaaattggtcttgggggccaaaactgccacaaatgcaaaactt-gggggcggttttgt 26702505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 26972336 - 26972237
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || |||||  |||||||| |||||||||   |||| ||||||||||||||||  || ||||||| ||||||| ||||||    
T  26972336 gtggcacctcacttagggtgccacgtcaggatagaccgaatcaaaattggtcttgggggccaaaactgccacaaatgcaaaactt-gggggcggttttgt 26972238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 12406131 - 12406040
Alignment:
Q  79 aaaacttagggggcgattttgtagnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    ||||||||||||||| ||||||||        |||||||| |||||||||  |||||||||||||||  ||||||||||| |||||||||||    
T  12406131 aaaacttagggggcggttttgtagttttctttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcct 12406040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 18403150 - 18403053
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||||||| || |||| ||||||| ||||||||||||   |||| || ||||||||||| |  || ||||||||||| | ||||||||||    
T  18403150 cacctcacttagggtgccacgtcaacgtagactgagtcaaaattggtcttgggggtcaaaactgccagagatgcaaaacttagggagtgattttgtag 18403053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4096619 - 4096576
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  4096619 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 4096576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10029217 - 10029260
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  10029217 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 10029260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 19340910 - 19340997
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagg 88  Q
    ||||||||||| |||||||| || |||| ||| |||||||||||||||| | |||| | | ||||||||||||  || ||||||||||    
T  19340910 gtggcacctcatttagggtgccacgtcaacgttgaccgagtcaaaattggctttggggactaaaactgccacagatgcaaaacttagg 19340997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35306847 - 35306890
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  35306847 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 35306890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35678229 - 35678272
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  35678229 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 35678272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39528934 - 39528891
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  39528934 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 39528891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 24405657 - 24405557
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||| | || || ||| |||||||||||||||||| |  ||| |||||||||||||| |  || |||||||||  |||| ||||||    
T  24405657 gtggcacctcacttagggagccacgttagcatagaccgagtcaaaattggccatgg-ggccaaaactgccaaagatgcaaaacttagttggcggttttgt 24405559  T
Q  101 ag 102  Q
    ||    
T  24405558 ag 24405557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 28446168 - 28446087
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaactta 86  Q
    |||||||| |||||||||| ||||||||| ||||||||||||||| | || | ||||||| ||| ||||  || ||||||||    
T  28446168 cacctcacgtagggtgtcaggtcagcgtataccgagtcaaaattggccttaggggccaaagctgtcacaaatgcaaaactta 28446087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 40133079 - 40133143
Alignment:
Q  25 gtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggg 90  Q
    ||||| |||||||| |||||||||| |||||| ||||||||||| ||||  |||||||||||||||    
T  40133079 gtcagggtagaccgggtcaaaattggcattgg-ggccaaaactgtcacaaatgtaaaacttagggg 40133143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8340105 - 8340153
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattg 49  Q
    |||||||||||||||||||| || |||||||| ||||||||||| ||||    
T  8340105 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacattg 8340153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 28736608 - 28736560
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattg 49  Q
    |||||||||||||||||||| || |||||||| ||||||||||| ||||    
T  28736608 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacattg 28736560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3020739 - 3020782
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  3020739 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 3020782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4125589 - 4125632
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  4125589 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 4125632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7623665 - 7623708
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  7623665 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 7623708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8755181 - 8755138
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  8755181 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 8755138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 10332147 - 10332202
Alignment:
Q  16 gggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgcca 71  Q
    |||||||| ||||||| ||||  |||||||| || |||||||||||||||||||||    
T  10332147 gggtgtcacgtcagcgaagactaagtcaaaagtggcattggaggccaaaactgcca 10332202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11480180 - 11480223
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  11480180 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 11480223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 16666741 - 16666698
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  16666741 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 16666698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22925806 - 22925763
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  22925806 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 22925763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28388126 - 28388169
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  28388126 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 28388169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28620207 - 28620164
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  28620207 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 28620164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31172733 - 31172690
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  31172733 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 31172690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33825768 - 33825725
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  33825768 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 33825725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34168933 - 34168976
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  34168933 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 34168976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34606515 - 34606558
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  34606515 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 34606558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34734218 - 34734261
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||| |||||||||| |||||||| |||||||||||    
T  34734218 gtggcacctcacctagggtgtcacgtcagcgttgaccgagtcaa 34734261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35055945 - 35055902
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  35055945 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 35055902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40768056 - 40768013
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  40768056 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 40768013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42739732 - 42739775
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  42739732 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 42739775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42779313 - 42779356
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| || ||||| |||||||||||    
T  42779313 gtggcacctcacttagggtgtcacgttagcgttgaccgagtcaa 42779356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42947569 - 42947526
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  42947569 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 42947526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16521322 - 16521280
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtca 43  Q
    |||||||||||||||||||| || |||||||| ||||||||||    
T  16521322 gtggcacctcacttagggtgccacgtcagcgttgaccgagtca 16521280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 24779434 - 24779393
Alignment:
Q  8 ctcacttagggtgtcatgtcagcgtagaccgagtcaaaattg 49  Q
    ||||||| ||||| || |||||||||||||||||||||||||    
T  24779434 ctcacttggggtgccacgtcagcgtagaccgagtcaaaattg 24779393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 31157048 - 31157081
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtag 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  31157048 gtggcacctcacttagggtgtcacgtcagcgtag 31157081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 91)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 51315630 - 51315799
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| | |||| |||||||||||||||| ||| ||||||||||||||| ||||||    
T  51315630 gtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacaggtgcaaaacttagggggcggttttgt 51315729  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    ||        |||||||| |||||||||  |||||||||||||||  ||||||||||| |||||||||||    
T  51315730 agttttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcct 51315799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 44585933 - 44586097
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||| |  ||| ||||||||||||||||   | ||||||||||||||| |||||||    
T  44585933 tggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccgtgggggccaaaactgccacagaagcaaaacttagggggcggttttgta 44586032  T
Q  102 gnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaa 166  Q
    |        |||||||| |||||||||  |||||||||||||||  ||||||||||| |||||||    
T  44586033 gttttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaa 44586097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 44436544 - 44436645
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| | |||| ||||||||||||||||  || ||||||||||||||| ||||||    
T  44436544 gtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggttttgt 44436643  T
Q  101 ag 102  Q
    ||    
T  44436644 ag 44436645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 1938480 - 1938383
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||  |||||||||| ||||| ||| |||||||| |||||| ||||||||    
T  1938480 cacctcacttagggtgccatgtcagcgtagaccgagtcaaaattgactttgtgggccaaaactaccacaggtgcaaaacttaaggggcggttttgtag 1938383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 35359156 - 35359067
Alignment:
Q  9 tcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgatttt 98  Q
    ||||||| |||| || |||||||||||||||||||||||||||||| | |||||||||||||||||||| |||| |||||||||||||||    
T  35359156 tcacttaaggtgccacgtcagcgtagaccgagtcaaaattgacattaggggccaaaactgccacatgtgcaaaaattagggggcgatttt 35359067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 54719144 - 54719244
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||| |||||| ||||||| |||  |||| || ||||||||||||||| |||||||    
T  54719144 tggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggcattgggggccaaacctggtacatatgcaaaacttagggggcggttttgta 54719243  T
Q  102 g 102  Q
    |    
T  54719244 g 54719244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 36687737 - 36687920
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||| |||||||  || ||| ||||||| |  |||||||    
T  36687737 gtggcacctcacttagggtgccacgtcagcgtaaaccgagtcaaaattgacattggaggccaaaattgccacaaatgcaaatcttagggtgaaattttgt 36687836  T
Q  101 ag----nnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcctttaatttata 180  Q
    ||            |||||||||| |||||||  ||||||| ||| |||| ||||||||||| ||||||| ||| || ||||||    
T  36687837 aggttttttttcttcttaggggactaaaatcgcaactttggaaaaattaatgggctaaaactgctattaaacctatattttata 36687920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 3916597 - 3916496
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || || || ||||||||||||||||||||| |||| ||||||||||||||||  || ||||||||| | ||||||||||    
T  3916597 gtggcacctcacttagggtgccacgttagtgtagaccgagtcaaaattgactttgggggccaaaactgccacagatgcaaaacttagtgagcgattttgt 3916498  T
Q  101 ag 102  Q
    ||    
T  3916497 ag 3916496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 14856702 - 14856791
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggg 90  Q
    ||||||| ||||||| ||||||| ||||||||||||||| |||||||||||||||| ||||||||||| |||||||| |||| |||||||    
T  14856702 gtggcacatcacttaaggtgtcacgtcagcgtagaccgaatcaaaattgacattgggggccaaaactggcacatgtgcaaaatttagggg 14856791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 19404540 - 19404641
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||||||||||| || |||||||||  ||||||||||| | |||| ||||||||||| |||||||| |||||||| ||| |||||||||    
T  19404540 gtggcacctcacttagggtgtcacgttagcgtagactaagtcaaaattggccttgggggccaaaactgtcacatgtgcaaaacttaagggacgattttgt 19404639  T
Q  101 ag 102  Q
    ||    
T  19404640 ag 19404641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 33329763 - 33329864
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||   |||| ||||||||||||||||  || || ||||||||| || ||||||    
T  33329763 gtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggtcttgggggccaaaactgccacaaatgcaatacttaggggacggttttgt 33329862  T
Q  101 ag 102  Q
    ||    
T  33329863 ag 33329864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 43747426 - 43747527
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||||   ||| |||||||||||||| |  || ||||||||||||||| ||||||    
T  43747426 gtggcacctcacttaggatgccacgtcagcgtagaccgagtcaaaattgatcgtgggggccaaaactgccataaatgcaaaacttagggggcggttttgt 43747525  T
Q  101 ag 102  Q
    ||    
T  43747526 ag 43747527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 48348405 - 48348505
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||| ||| || |||||||||||||||||||||||||   |||| || |||||||||||||| || |||||||| |||||||||||||    
T  48348405 gtggcacctcacttagcgtgccacgtcagcgtagaccgagtcaaaattgggcttgg-ggtcaaaactgccacatatgcaaaacttaaggggcgattttgt 48348503  T
Q  101 ag 102  Q
    ||    
T  48348504 ag 48348505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 7 - 168
Target Start/End: Complemental strand, 54464324 - 54464163
Alignment:
Q  7 cctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtagnnnn 106  Q
    ||||||||| |||| || || |||||||||||||||||||||||| |||| || |||||||||||||| || |||||||||||| |  ||||||||        
T  54464324 cctcacttaaggtgccacgtgagcgtagaccgagtcaaaattgaccttgggggtcaaaactgccacatatgcaaaacttaggggacagttttgtagttct 54464225  T
Q  107 nnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagc 168  Q
        |||| |||| ||||||||| ||||| | |||||||  || |||||||| |||||||||    
T  54464224 ttttcttaagggatcaaaatcgtaactttagaaaagttaggggactaaaactgctattaagc 54464163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 8024928 - 8025028
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||| |||||| ||||| ||||| ||||||||||||||||| |||||||   ||||||||||||||| |||||| || |||||||||||| |||||||||    
T  8024928 gtggtacctcatttaggatgtcacgtcagcgtagaccgagttaaaattggtcttggaggccaaaactaccacatatgcaaaacttaggggacgattttgt 8025027  T
Q  101 a 101  Q
    |    
T  8025028 a 8025028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 7218297 - 7218384
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagg 88  Q
    ||||||||||||||| ||||||| |||||| |||| | ||||||||||||| |||| ||||||||||||||||  |||||||||||||    
T  7218297 gtggcacctcacttaaggtgtcacgtcagcatagatcaagtcaaaattgaccttgggggccaaaactgccacagatgtaaaacttagg 7218384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 1814703 - 1814866
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattga-cattggaggccaaaactgccacatgtgtaaaacttagggggcgattttg 99  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||| | | || ||||||||||||||    || |||||||||||| || |||||    
T  1814703 gtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattgatcttagggggccaaaactgcca----tgcaaaacttaggggacggttttg 1814798  T
Q  100 tagnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagc 168  Q
    |||        |||||||| |||||||||  ||||||| |||||||   |||||||||| |||||||||    
T  1814799 tag-tttttttcttaggggtccaaaatcgaaactttggaaaagttaggaggctaaaactgctattaagc 1814866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 20432330 - 20432432
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgt-aaaacttagggggcgattttg 99  Q
    ||||||||||||||||||||  | ||||||||||||| ||||||||||| | |||| || |||||||||||||  ||| ||||||||||||| |||||||    
T  20432330 gtggcacctcacttagggtgctacgtcagcgtagaccaagtcaaaattgtccttgggggtcaaaactgccacagatgtaaaaacttagggggtgattttg 20432429  T
Q  100 tag 102  Q
    |||    
T  20432430 tag 20432432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 46226865 - 46226775
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttaggggg 91  Q
    |||||||||||||||||||| || ||||||||| ||||||| ||||||| ||| || |||||||||||||||| ||| ||||| |||||||    
T  46226865 gtggcacctcacttagggtgccacgtcagcgtataccgagttaaaattggcatcgggggccaaaactgccacaggtgcaaaacataggggg 46226775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 578559 - 578648
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggg 90  Q
    |||||||||| ||||||||| || |||||| |||||||||||||||||| | |||| |||||||||| ||||| ||| ||||||||||||    
T  578559 gtggcacctcgcttagggtgccacgtcagcatagaccgagtcaaaattggccttgggggccaaaactaccacaggtgaaaaacttagggg 578648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 28712622 - 28712521
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || ||||| ||||||||||||||| ||| | ||||  || |||||||| |||  || ||||||||||||||||||||||    
T  28712622 gtggcacctcacttagggtgccacgtcagtgtagaccgagtcaaagttggccttgggtgctaaaactgctacagatgcaaaacttagggggcgattttgt 28712523  T
Q  101 ag 102  Q
    ||    
T  28712522 ag 28712521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 36677657 - 36677758
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||| |||| || ||||||||| ||||||||||||||||| ||||||||||||| |||||||  || ||| ||||||| |  |||||||    
T  36677657 gtggcacctcacttaaggtgccacgtcagcgtaaaccgagtcaaaattgaccttggaggccaaaattgccacaaatgcaaatcttagggtgaaattttgt 36677756  T
Q  101 ag 102  Q
    ||    
T  36677757 ag 36677758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 49787394 - 49787249
Alignment:
Q  25 gtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtagnnnnnnnncttaggggaccaaa 124  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||  || |||||||  |||  | |||| |||        |||||||||||||     
T  49787394 gtcagcgtagaccgagtcaaaattgactttggaggccaaaactgccacagatgcaaaacttgagggatggttttatagttttttttcttaggggaccaag 49787295  T
Q  125 atcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    || |  ||||||| ||||||| |||||||||| | |||||||||||    
T  49787294 attgcaactttggaaaagttagagggctaaaattgctattaagcct 49787249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 86741 - 86653
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttaggg 89  Q
    |||||||||||||||||||  |||||||||||||| |||||||||||||   |||| |||||||||||| ||| ||| |||||||||||    
T  86741 gtggcacctcacttagggtcccatgtcagcgtagatcgagtcaaaattggtcttgggggccaaaactgctacaagtgcaaaacttaggg 86653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 25843533 - 25843437
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattt 97  Q
    |||||||||| ||||||||| || |||||||||||| | |||||||||| | |||| | ||||||||||||||  || |||||||||||||||||||    
T  25843533 gtggcacctcgcttagggtgccacgtcagcgtagactgggtcaaaattggccttggggaccaaaactgccacagatgcaaaacttagggggcgattt 25843437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 44433235 - 44433311
Alignment:
Q  26 tcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||||||||||| |||||||||| | |||| ||||||||||||||||| || ||||||||||||||| ||||||||    
T  44433235 tcagcgtagaccgggtcaaaattggccttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtag 44433311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 28204636 - 28204733
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||||| ||||| || || ||||| ||||||||||||||||||| ||||||||||||||||| |||||  |  |||||||| ||||| |||||||||    
T  28204636 cacctcaattaggatgccacgtcagtgtagaccgagtcaaaattggcattggaggccaaaactaccacaaatacaaaacttaaggggcaattttgtag 28204733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 38177344 - 38177178
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || ||||||| | ||||||||||||||| | |||| |||||||| || ||||| || ||||||||   || | ||||||    
T  38177344 gtggcacctcacttagggtgccacgtcagcgcaaaccgagtcaaaattggccttgggggccaaaaatgtcacatatgcaaaacttaaaaggtggttttgt 38177245  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcc 169  Q
    |         |||||||| |||||||||  |||||||||||||||| ||||||||| | | ||||||||    
T  38177244 a--attttttcttagggggccaaaatcgcaactttgggaaagttaaggggctaaaattgccattaagcc 38177178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 3192941 - 3192839
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattg-gaggccaaaactgccacatgtgtaaaacttagggggcgattttg 99  Q
    |||||||||||||||||||| ||||| || ||||||||||||||||||||| ||| | |||| ||||| | |||  || |||||||||||| || |||||    
T  3192941 gtggcacctcacttagggtgccatgttagtgtagaccgagtcaaaattgaccttgaggggcctaaactactacagttgaaaaacttaggggtcggttttg 3192842  T
Q  100 tag 102  Q
    |||    
T  3192841 tag 3192839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14992777 - 14992843
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaact 67  Q
    ||||||||||||||| |||| ||||||||||||||| |||||||||||||| |||| || |||||||    
T  14992777 gtggcacctcacttaaggtgccatgtcagcgtagactgagtcaaaattgaccttgggggacaaaact 14992843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 14340884 - 14340981
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||   || ||||| |||||||||||||||||||||  | |||| ||||||||||||||||  || |||||||||||| | |||||||||    
T  14340884 cacctcacttaacctgccatgttagcgtagaccgagtcaaaattagcgttgggggccaaaactgccacaaatgcaaaacttaggggactattttgtag 14340981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 27178297 - 27178394
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||| ||||||| ||  |||||||||||| ||||||||||| |||||| || ||||||| |||||  || ||||||||||||| | ||||||||    
T  27178297 cacctcacgtagggtgacacatcagcgtagaccaagtcaaaattggcattgggggtcaaaactaccacagatgcaaaacttagggggtggttttgtag 27178394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 44624787 - 44624703
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggg 90  Q
    |||||||||||||||| || ||||||||||||||||||||||||| | |||| | ||||||||||||||  || ||||| ||||||    
T  44624787 cacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgg-gaccaaaactgccacagatgcaaaacatagggg 44624703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 38957981 - 38957913
Alignment:
Q  34 gaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||||||| | |||| ||||||||||||||||  || ||||||||||||||| ||||||||    
T  38957981 gaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtag 38957913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 52008408 - 52008313
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggcc--aaaactgccacatgtgtaaaacttagggggcgatttt 98  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |  || | ||||  ||||||||||||| || |||| |||| |||| |||||    
T  52008408 cacctcacttagggtgtcacgtcagcgtagaccgagtcaaaattaattttaggggccaaaaaactgccacatatgcaaaaattagagggcaatttt 52008313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 53184668 - 53184605
Alignment:
Q  9 tcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccaca 73  Q
    ||||||||||||||| |||||||||||||||||||||||||   ||||||| |||||||||||||    
T  53184668 tcacttagggtgtcaagtcagcgtagaccgagtcaaaattggttttggagg-caaaactgccaca 53184605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12759654 - 12759704
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgac 51  Q
    ||||||||||||||||||||||| |||||| |||| |||||||||||||||    
T  12759654 gtggcacctcacttagggtgtcacgtcagcctagatcgagtcaaaattgac 12759704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 36567020 - 36567086
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaact 67  Q
    |||||||||||||||||||| || |||||||| |||||||||||||| | | |||| ||||||||||    
T  36567020 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaaaatcggccttgggggccaaaact 36567086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 44624371 - 44624414
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  44624371 gtggcacctcacttagggtgccatgtcagcgttgaccgagtcaa 44624414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 4474231 - 4474150
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttag 87  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||   || | || |||||||||||||  || |||||||||    
T  4474231 cacctcacttagg-tgtcatgtcagcgtagaccgaatcaaaattggtcttaggggtcaaaactgccacaaatgcaaaacttag 4474150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 15976378 - 15976316
Alignment:
Q  28 agcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggg 90  Q
    ||||||| |||||||||||||| | |||  |||||||||||||||| ||| ||||||||||||    
T  15976378 agcgtaggccgagtcaaaattggctttgatggccaaaactgccacaagtgcaaaacttagggg 15976316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 47189744 - 47189841
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||||||||| ||||||| ||||| ||||||  ||||||||||||  |||  || |||||||||||||  || |||||||| || ||| ||||||||    
T  47189744 cacctcacttaaggtgtcacgtcagtgtagacgaagtcaaaattgatcttgagggtcaaaactgccacaaatgcaaaacttatggagcggttttgtag 47189841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 14340847 - 14340731
Alignment:
Q  55 ggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtagnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaa 154  Q
    ||||||||||||||| |||  || |||||||  |||||| ||||||||        | ||||||||||||||||| |||| | ||||||||  |||| ||    
T  14340847 ggaggccaaaactgctacaattgcaaaacttgtggggcggttttgtagtttttattcgtaggggaccaaaatcgtaacttcgtgaaagttagggggcgaa 14340748  T
Q  155 aactactattaagcctt 171  Q
    |||| ||||||||||||    
T  14340747 aactcctattaagcctt 14340731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 257581 - 257624
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  257581 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 257624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 787267 - 787224
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  787267 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 787224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 791467 - 791558
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcg 93  Q
    ||||||||  ||||||||| || ||||||||||| | |||| ||||||||||||  |||||||| || ||||  || |||||||| ||||||    
T  791467 tggcacctatcttagggtgccacgtcagcgtagatcaagtcgaaattgacattgagggccaaaagtgtcacagatgcaaaacttatggggcg 791558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2205674 - 2205717
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||| |||||| |||||||| |||||||||||    
T  2205674 gtggcacctcacttagagtgtcacgtcagcgttgaccgagtcaa 2205717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3212297 - 3212340
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  3212297 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 3212340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5577101 - 5577058
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  5577101 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 5577058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8728056 - 8728099
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  8728056 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 8728099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9079943 - 9079986
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  9079943 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 9079986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9153622 - 9153665
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||| |||||||||||| |||||||| |||||||||||    
T  9153622 gtggcacctcgcttagggtgtcacgtcagcgttgaccgagtcaa 9153665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9630936 - 9630893
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  9630936 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 9630893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10439454 - 10439411
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| ||||| || |||||||||||    
T  10439454 gtggcacctcacttagggtgtcacgtcagagttgaccgagtcaa 10439411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10864283 - 10864240
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  10864283 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 10864240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19391780 - 19391823
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  19391780 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 19391823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 25154348 - 25154301
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattg 49  Q
    |||||||||||||| |||| || ||||||||||| |||||||||||||    
T  25154348 tggcacctcacttaaggtgccacgtcagcgtagatcgagtcaaaattg 25154301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25782798 - 25782841
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  25782798 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 25782841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27748412 - 27748369
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  27748412 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 27748369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27857280 - 27857323
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  27857280 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 27857323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28097569 - 28097612
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  28097569 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 28097612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 28944154 - 28944095
Alignment:
Q  43 aaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||||| | |||| |||||||||||| ||||||| |||||||||||||| ||| |||||    
T  28944154 aaaattggccttgggggccaaaactgctacatgtgcaaaacttagggggcaattatgtag 28944095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28964299 - 28964342
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  28964299 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 28964342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30200559 - 30200602
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  30200559 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 30200602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30760999 - 30760956
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  30760999 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 30760956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31577587 - 31577544
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  31577587 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 31577544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 32458928 - 32458971
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  32458928 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 32458971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 33252630 - 33252673
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  33252630 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 33252673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 33576554 - 33576597
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  33576554 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 33576597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33933535 - 33933492
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  33933535 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 33933492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37182144 - 37182187
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||| |||| ||||||    
T  37182144 gtggcacctcacttagggtgtcacgtcagcgttgaccaagtcaa 37182187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38511802 - 38511845
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  38511802 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 38511845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41223680 - 41223637
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  41223680 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 41223637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 41281992 - 41282035
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  41281992 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 41282035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42230176 - 42230219
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||  |||||||||||    
T  42230176 gtggcacctcacttagggtgtcacgtcagcgctgaccgagtcaa 42230219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44177455 - 44177412
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  44177455 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 44177412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44184139 - 44184096
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  44184139 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 44184096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 47530507 - 47530464
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  47530507 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 47530464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 50033386 - 50033429
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  50033386 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 50033429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 51842969 - 51842926
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  51842969 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 51842926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 51860501 - 51860458
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||| |||||||||| |||||||| |||||||||||    
T  51860501 gtggcacctcacatagggtgtcacgtcagcgttgaccgagtcaa 51860458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 53191129 - 53191086
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  53191129 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 53191086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 53531951 - 53531994
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  53531951 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 53531994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 5153927 - 5153969
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||| || |||||||| |||||||||||    
T  5153927 tggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 5153969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33622034 - 33621992
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtca 43  Q
    ||||||||||||||||||||||  |||||||| ||||||||||    
T  33622034 gtggcacctcacttagggtgtctcgtcagcgttgaccgagtca 33621992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 49997802 - 49997844
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||| || |||||||| |||||||||||    
T  49997802 tggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 49997844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 25902450 - 25902401
Alignment:
Q  121 caaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    ||||||| | ||||||| ||||||| ||||||||||||| ||||||||||    
T  25902450 caaaatcataactttggaaaagttagagggctaaaactagtattaagcct 25902401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 43586715 - 43586808
Alignment:
Q  9 tcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||| || ||||||||||||| |||||||||||  ||  | ||||| ||||| ||||  || ||||| |||| | |||||||||||    
T  43586715 tcacttagggtgccacgtcagcgtagaccaagtcaaaattggtatcaggggccataactgtcacaaatgcaaaacataggagacgattttgtag 43586808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 46985033 - 46984980
Alignment:
Q  18 gtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgcca 71  Q
    |||||| |||||||| |||||||||||||||||  | || ||||||||||||||    
T  46985033 gtgtcacgtcagcgttgaccgagtcaaaattgatttagggggccaaaactgcca 46984980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 7819098 - 7819058
Alignment:
Q  4 gcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||| || |||||||| |||||||||||    
T  7819098 gcacctcacttagggtgccacgtcagcgttgaccgagtcaa 7819058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 22202649 - 22202609
Alignment:
Q  4 gcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||  ||||||| |||||||||||    
T  22202649 gcacctcacttagggtgtcacttcagcgttgaccgagtcaa 22202609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 5e-41; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 30539137 - 30539305
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || |||||| |||||||| |||||||||||||||| ||||||||||||||||  || |||||||||||| || ||||||    
T  30539137 gtggcacctcacttagggtgccacgtcagcatagaccgaatcaaaattgacattgggggccaaaactgccacagatgcaaaacttaggggacggttttgt 30539236  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    ||        ||||||||||||||||||  |||||||||||||| ||||||||||||| |||||||||||    
T  30539237 agttttttttcttaggggaccaaaatcgcaactttgggaaagtt-aagggctaaaactgctattaagcct 30539305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 21486818 - 21486721
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||  ||||||||||||| ||||||| ||| ||||||||||||||| ||||||||    
T  21486818 cacctcacttagggtgtcacgtcagcgtagaccaagtcaaaattgatcttggaggccaaaaatgccacaggtgcaaaacttagggggcggttttgtag 21486721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 23702281 - 23702450
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||| ||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||||||||| ||||  || |||||||||||| | |||||||    
T  23702281 gtggcatctcacttagggtgccatgtcagcatagactgagtcaaaattgaccttggaggccaaaactgtcacaaatgcaaaacttaggggacaattttgt 23702380  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcctt 171  Q
    |         |||||||| | |||||||  ||||| |||||||||  ||||||||||| ||||||||||||    
T  23702381 a-atttttttcttagggggctaaaatcgcaacttttggaaagttagggggctaaaactgctattaagcctt 23702450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 29657872 - 29657770
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacatt-ggaggccaaaactgccacatgtgtaaaacttagggggcgattttg 99  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||||||| || || ||||||||||||||||| || |||| |||||||||| |||||    
T  29657872 gtggcacctcacttagggtgtcacgtcagtgtagaccgaatcaaaattgactttggggggccaaaactgccacatatgcaaaatttagggggcggttttg 29657773  T
Q  100 tag 102  Q
    |||    
T  29657772 tag 29657770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 22846611 - 22846446
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| |||||||||||||||| | ||||||||| | |||  |||||||||||||| |  || |||||||| ||| |||||||||    
T  22846611 gtggcacctcacttagggtgccatgtcagcgtagaccaattcaaaattgcccttgagggccaaaactgccaaagatgcaaaacttatgggacgattttgt 22846512  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaa 166  Q
    ||        ||||||||||||||||| | | ||| |||||||||  |||||||| || |||||||    
T  22846511 agttttttttcttaggggaccaaaatcataattttaggaaagttatggggctaaatctgctattaa 22846446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 41487357 - 41487520
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||   |||| ||||||||| || |||  || ||||||||||||||| |||||||    
T  41487357 tggcacctcacttagcgtgtcacgtcagcgtagaccgagtcaaaattggtcttgggggccaaaacagctacagttgcaaaacttagggggcggttttgta 41487456  T
Q  102 gnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaa 166  Q
    |        |||| ||| | |||||||  ||||||| ||||||| |||||||||||| |||||||    
T  41487457 gttttttttcttaaggg-ctaaaatcgcaactttggaaaagttagagggctaaaactgctattaa 41487520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 37813247 - 37813338
Alignment:
Q  11 acttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||| || ||||||||||||||||||||||||| | |||| ||||||||||||||||  || ||||||||||||||| ||||||||    
T  37813247 acttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggttttgtag 37813338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 29044693 - 29044862
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||| |||||||  || ||||||||||||||||||||||||| | |||| ||||||||||||||||  || |||||||| ||| |  ||||||    
T  29044693 gtggcacctcatttagggtaccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttatgggacagttttgt 29044792  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagccttt 172  Q
    ||        |||| |||||||||||||| ||||| || ||||||  ||||||||||| |||||||||||||    
T  29044793 ag-gttttttctta-gggaccaaaatcgtaactttagggaagttagggggctaaaactgctattaagccttt 29044862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 39889926 - 39890020
Alignment:
Q  8 ctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||  || ||||||||| |||||  |||||||    
T  39889926 ctcacttagagtgtcacgtcagcgtaaaccgagtcaaaattgacattggaggccaaaattgccacagatgcaaaacttagagggcggatttgtag 39890020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 6807315 - 6807416
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||||| |||  || |||||||||||||  || ||||||||||||| | ||||||    
T  6807315 gtggcacctcacttagggtgccacgtcagcgtagacagagtcaaaattgaccttgagggacaaaactgccacaaatgcaaaacttagggggtggttttgt 6807414  T
Q  101 ag 102  Q
    ||    
T  6807415 ag 6807416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 6 - 167
Target Start/End: Complemental strand, 26823989 - 26823828
Alignment:
Q  6 acctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtagnnn 105  Q
    |||||||||||||||||| |||| | ||||  || ||||||||| |||||| | ||||||||||||||  || ||||||||||||| ||||||||||       
T  26823989 acctcacttagggtgtcacgtcaacctagattgaatcaaaattggcattggggcccaaaactgccacaaatgcaaaacttagggggtgattttgtagttt 26823890  T
Q  106 nnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaag 167  Q
         |||| |||  ||||||||| |||||| |||||||| |||| ||||||| ||||||||    
T  26823889 tttttcttaaggggtcaaaatcgtaactttgagaaagttagagggttaaaactgctattaag 26823828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 3676275 - 3676375
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||   |||| | ||||||||||||||  || ||||||||| ||||| |||||||    
T  3676275 tggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggttttggggaccaaaactgccacagatgcaaaacttagtgggcggttttgta 3676374  T
Q  102 g 102  Q
    |    
T  3676375 g 3676375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 169
Target Start/End: Complemental strand, 45177365 - 45177201
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtagnn 104  Q
    |||||||||||||||| || ||||| ||||||||||||||||||  | |||  ||||||||||| ||||  || |||||||||||| |||||||||||      
T  45177365 cacctcacttagggtgccacgtcagtgtagaccgagtcaaaattagccttgagggccaaaactgtcacagatgcaaaacttaggggacgattttgtagtt 45177266  T
Q  105 nnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcc 169  Q
          ||||||||| ||||||||  |||||| ||||||||   ||||||| || ||||||||||    
T  45177265 ttttttcttaggggatcaaaatcgcaactttgagaaagttaggaggctaaatctgctattaagcc 45177201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 32071165 - 32071262
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||||||||| ||||  |||||||||||||||||||||||||||   |||||| ||||||||| || || || ||||||||||||||| ||||||||    
T  32071165 cacctcacttaaggtgatatgtcagcgtagaccgagtcaaaattgttcttggagaccaaaactgtcatatatgcaaaacttagggggcggttttgtag 32071262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 25144110 - 25144009
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||| ||||||||||||  | ||||||||| ||||||||||||||| | ||||| |||||||||||||||  || ||||||||| || | |||||||    
T  25144110 gtggcacatcacttagggtgcaacgtcagcgtaaaccgagtcaaaattggctttggatgccaaaactgccacagatgcaaaacttagtggccaattttgt 25144011  T
Q  101 ag 102  Q
    ||    
T  25144010 ag 25144009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 29790917 - 29790834
Alignment:
Q  9 tcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggc 92  Q
    |||| ||||||| || ||||||||||||| ||||||||||||| | || | |||||||||||||||||| ||||||||| ||||    
T  29790917 tcacatagggtgccacgtcagcgtagaccaagtcaaaattgacctcggggaccaaaactgccacatgtgcaaaacttagagggc 29790834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 16982757 - 16982857
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||| ||||| || ||||||||||||  ||||||||||| | |||| || |||||||| ||||  || ||||||||||||||| ||||||    
T  16982757 gtggcacctcacttggggtgccacgtcagcgtagactaagtcaaaattggccttgg-gggcaaaactggcacagatgcaaaacttagggggcggttttgt 16982855  T
Q  101 ag 102  Q
    ||    
T  16982856 ag 16982857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 20853544 - 20853443
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||| || ||||| || |||| |||||| | | ||||||||||  |||| ||||||||||||||||| || ||||||||||||| | ||||||    
T  20853544 gtggcacctcattttgggtgccacgtcaacgtagatctattcaaaattgatcttgggggccaaaactgccacatatgcaaaacttagggggtggttttgt 20853445  T
Q  101 ag 102  Q
    ||    
T  20853444 ag 20853443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 27545507 - 27545408
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || ||||||||||| ||||| ||||||| | |||| |||||||||||||| |  || |||||||| ||| |||||||||    
T  27545507 gtggcacctcacttagggtgccacgtcagcgtagatcgagttaaaattggctttgg-ggccaaaactgccatagatgcaaaactta-gggtcgattttgt 27545410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 170
Target Start/End: Complemental strand, 23702181 - 23702122
Alignment:
Q  111 cttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    ||||||||||||||||||| |||||| ||||||||| |||| |||||| |||||||||||    
T  23702181 cttaggggaccaaaatcgtaactttgtgaaagttaaggggcgaaaactgctattaagcct 23702122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 170
Target Start/End: Original strand, 28349563 - 28349622
Alignment:
Q  111 cttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    |||||||| |||||||||  |||||||||||||||  |||||||||||||||||||||||    
T  28349563 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactactattaagcct 28349622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9762368 - 9762298
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgcca 71  Q
    ||||||||||| |||  ||| || |||||||||||| || |||||||||| ||||||||||||||||||||    
T  9762368 gtggcacctcatttaatgtgccacgtcagcgtagacagaatcaaaattgatattggaggccaaaactgcca 9762298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 37940063 - 37939978
Alignment:
Q  16 gggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||| || |||||||||||||||||||||||||   |||| | ||||||||||||||| || ||||||||||||| | ||||||||    
T  37940063 gggtgccacgtcagcgtagaccgagtcaaaattggtcttggtg-ccaaaactgccacatatgcaaaacttagggggtggttttgtag 37939978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 22192448 - 22192545
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||||||| ||  | |||||||||||||||||||||||| ||||  |||||||| || |||  || |||||||||| | || ||||||||    
T  22192448 cacctcacttagggtgccacataagcgtagaccgagtcaaaattgaccttggcagccaaaacggctacagttgcaaaacttaggagacggttttgtag 22192545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 33298507 - 33298435
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaatt-gacattggaggccaaaactgccaca 73  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||| ||| ||||  |||||||||||||||    
T  33298507 gtggcacctcacttagggtgccacgtcagcgtagaccgaatcaaaattagac-ttgggagccaaaactgccaca 33298435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 5734330 - 5734373
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  5734330 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 5734373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8287749 - 8287792
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  8287749 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 8287792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37205686 - 37205729
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  37205686 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 37205729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35213175 - 35213225
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgac 51  Q
    ||||||||||||||| |||| || |||||||||| ||||||||||||||||    
T  35213175 gtggcacctcacttaaggtgccacgtcagcgtaggccgagtcaaaattgac 35213225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 14880495 - 14880414
Alignment:
Q  9 tcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggg 90  Q
    ||||||||| || || |||||| |||||||||||||||| | | |||| ||||||||||||||||  || |||| |||||||    
T  14880495 tcacttaggatgccacgtcagcatagaccgagtcaaaatcggccttgggggccaaaactgccacagatgcaaaatttagggg 14880414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 41602622 - 41602549
Alignment:
Q  29 gcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||| |||||||||||||||| | | || |||||||||||||||||| | ||||||||| ||| | ||||||||    
T  41602622 gcgttgaccgagtcaaaattggcttagggggccaaaactgccacatgggcaaaacttagcgggtggttttgtag 41602549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 521591 - 521675
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaactta 86  Q
    ||||| |||| |||| ||| || |||||||||| |||||||||||| | | ||||||||||||| ||| ||| ||| ||||||||    
T  521591 tggcatctcatttagcgtgccacgtcagcgtagtccgagtcaaaatcggccttggaggccaaaattgctacaagtgcaaaactta 521675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 6655426 - 6655466
Alignment:
Q  4 gcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  6655426 gcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 6655466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 6735828 - 6735868
Alignment:
Q  4 gcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  6735828 gcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 6735868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20057124 - 20057172
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattg 49  Q
    |||||||||||||||||||| || |||||||| ||||||||||| ||||    
T  20057124 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaacattg 20057172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 414809 - 414852
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  414809 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 414852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 995139 - 995182
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  995139 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 995182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1657531 - 1657574
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  1657531 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 1657574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1985714 - 1985757
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  1985714 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 1985757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4167346 - 4167389
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  4167346 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 4167389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6335474 - 6335517
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  6335474 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 6335517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6641743 - 6641786
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  6641743 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 6641786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6745139 - 6745182
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  6745139 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 6745182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14032203 - 14032160
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  14032203 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 14032160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15188074 - 15188117
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  15188074 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 15188117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20095832 - 20095875
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  20095832 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 20095875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 20699366 - 20699441
Alignment:
Q  26 tcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    |||||||||||| ||||||||||||| |||  ||||||||||| ||||  |||||||| ||  |||| ||||||||    
T  20699366 tcagcgtagaccaagtcaaaattgactttgagggccaaaactgacacaaatgtaaaacataaagggcaattttgta 20699441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23233925 - 23233968
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  23233925 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 23233968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28596098 - 28596055
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  28596098 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 28596055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 32318673 - 32318630
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  32318673 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 32318630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 36788405 - 36788448
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  36788405 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 36788448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36801564 - 36801521
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  36801564 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 36801521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37953542 - 37953499
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  37953542 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 37953499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38166652 - 38166609
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  38166652 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 38166609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 39626113 - 39626156
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  39626113 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 39626156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 39635663 - 39635706
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  39635663 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 39635706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41625628 - 41625585
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  41625628 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 41625585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41788819 - 41788776
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  41788819 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 41788776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16531394 - 16531436
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtca 43  Q
    |||||||||||||||||||| || |||||||| ||||||||||    
T  16531394 gtggcacctcacttagggtgccacgtcagcgttgaccgagtca 16531436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 20819899 - 20819941
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtca 43  Q
    |||||||||||||||||||| ||||||||||| || |||||||    
T  20819899 gtggcacctcacttagggtgccatgtcagcgttgatcgagtca 20819941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 17071053 - 17071090
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccg 38  Q
    |||||||||||||||||||| || ||||||||||||||    
T  17071053 gtggcacctcacttagggtgccacgtcagcgtagaccg 17071090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 17577219 - 17577182
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccg 38  Q
    |||||||||||||||||||| || ||||||||||||||    
T  17577219 gtggcacctcacttagggtgccacgtcagcgtagaccg 17577182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 37813220 - 37813159
Alignment:
Q  111 cttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagccttt 172  Q
    |||||||| |||||||||| | |||| ||||||||  |||| |||||| |||||||||||||    
T  37813220 cttagggggccaaaatcgtaaatttgtgaaagttagggggcgaaaactgctattaagccttt 37813159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3411570 - 3411526
Alignment:
Q  1 gtggcacctcactt-agggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||| ||||||||| |||||||| |||||||||||    
T  3411570 gtggcacctcactttagggtgtcacgtcagcgttgaccgagtcaa 3411526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 17070964 - 17070904
Alignment:
Q  112 ttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagccttt 172  Q
    ||||||| |||||||||  |||| | ||||||||| |||| |||||| |||||||||||||    
T  17070964 ttagggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagccttt 17070904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 17577308 - 17577368
Alignment:
Q  112 ttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagccttt 172  Q
    ||||||| |||||||||  |||| | ||||||||| |||| |||||| |||||||||||||    
T  17577308 ttagggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagccttt 17577368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 18093049 - 18093005
Alignment:
Q  29 gcgtagaccgagtcaaaattgacattggaggccaaaactgccaca 73  Q
    |||| |||||||||||||||||| | || ||||||||||||||||    
T  18093049 gcgttgaccgagtcaaaattgacttagggggccaaaactgccaca 18093005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 41567087 - 41567135
Alignment:
Q  7 cctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattg 55  Q
    ||||| ||| ||||||| |||||| ||||||||||||||||| ||||||    
T  41567087 cctcatttaaggtgtcacgtcagcatagaccgagtcaaaattaacattg 41567135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 44269290 - 44269350
Alignment:
Q  26 tcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaactta 86  Q
    |||||||||  ||||||||||||| |||||| |||||||||| |||||  || ||||||||    
T  44269290 tcagcgtaggtcgagtcaaaattggcattgggggccaaaactaccacaaatgcaaaactta 44269350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 45209144 - 45209104
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagt 41  Q
    |||||||||||||||||||| || |||||||| ||||||||    
T  45209144 gtggcacctcacttagggtgccacgtcagcgttgaccgagt 45209104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 90)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 1420690 - 1420859
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || |||||||| |||||||||||||||| | |||| || || ||||||||||  || |||||||| |||||| ||||||    
T  1420690 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaaaattggccttgggggtcataactgccacaaatgcaaaacttatggggcggttttgt 1420789  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    ||        ||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  1420790 agttctttttcttaggggaccaaaatcgtaactttgggaaagttaaggggctaaaactgctattaagcct 1420859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 6 - 171
Target Start/End: Complemental strand, 2016954 - 2016789
Alignment:
Q  6 acctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtagnnn 105  Q
    ||||||||||||||| || ||||||||||||||||||||||||| | |||| |||||||||||||||||||| ||||||||||||||  ||||||||       
T  2016954 acctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacatgtgcaaaacttagggggcagttttgtagtct 2016855  T
Q  106 nnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcctt 171  Q
         ||| | || |||||||||  ||||||| |||||||  ||||||||||| |||| |||||||    
T  2016854 tttttctttgagggccaaaatcgcaactttggaaaagttagggggctaaaactgctatcaagcctt 2016789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 54983981 - 54984080
Alignment:
Q  3 ggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||||||||| || ||||||||||||| || |||||||||||||||  |||||||||| |||||||| |||| |||||||||||||||||||    
T  54983981 ggcacctcacttagggtgccacgtcagcgtagaccaagccaaaattgacattgggtgccaaaactgacacatgtgcaaaatttagggggcgattttgtag 54984080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 6637209 - 6637310
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||| |||||  |||||||||||||| |  || |||||||| |||||||||||||    
T  6637209 gtggcacctcacttagggtgccatgtcagtgtagaccgagtcaaaattggcattgtgggccaaaactgccagaaatgcaaaacttaaggggcgattttgt 6637308  T
Q  101 ag 102  Q
    ||    
T  6637309 ag 6637310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 51362702 - 51362527
Alignment:
Q  6 acctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag--- 102  Q
    ||||||||||||||| || ||||| |||||| ||||||||||||   |||| ||||||||||||||||| || ||||||||||||||| ||||||||       
T  51362702 acctcacttagggtgccacgtcagtgtagactgagtcaaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtagttt 51362603  T
Q  103 nnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcctttaattta 178  Q
            |||||||| |||||||||  ||||| | |||||||  ||||||||||||||||||| |||||||||||    
T  51362602 tttttcttcttagggggccaaaatcgcaactttagaaaagttagggggctaaaactactattaaacctttaattta 51362527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 20112296 - 20112463
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||| ||| || |||||||| |||||||||||||||| | |||| ||||||||||||||||| || ||||||| ||||||| ||||||    
T  20112296 gtggcacctcacttagagtgccacgtcagcgttgaccgagtcaaaattggctttgggggccaaaactgccacatatgcaaaactttgggggcggttttgt 20112395  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcc 169  Q
    ||        ||| |||| |||||||||  ||||||| ||||||| | ||||||||||  |||||||||    
T  20112396 ag-tatttttctttgggggccaaaatcgcaactttggaaaagttagaaggctaaaactgttattaagcc 20112463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 53312455 - 53312285
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || |||||||||||| ||||| |||||| | |||| |||||||||||||||||||| |||| |||||||| | ||||||    
T  53312455 gtggcacctcacttagggtgccacgtcagcgtagactgagtccaaattggccttgggggccaaaactgccacatgtgcaaaatttagggggtggttttgt 53312356  T
Q  101 ag-nnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    ||         |||||||| |||||||||  ||||||  |||||||  ||||||||| | |||||||||||    
T  53312355 agtttgtttttcttagggggccaaaatcgcaactttgaaaaagttagggggctaaaaatgctattaagcct 53312285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 2654115 - 2654283
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||| ||| |||||||||| || ||||||||||||| ||||||||||| | |||| || |||||||||||||| || ||||||||||||||  ||||||    
T  2654115 gtggctcctgacttagggtgccacgtcagcgtagaccaagtcaaaattggccttgggggtcaaaactgccacatatgcaaaacttagggggcagttttgt 2654214  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    ||         |||||||||||||||    |||||||||||||||  || ||||||||||||||||||||    
T  2654215 agtatttttt-ttaggggaccaaaataacaactttgggaaagttaggggcctaaaactactattaagcct 2654283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 4796186 - 4796271
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaactta 86  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||  |||| |||||||||||||||| ||| ||||||||    
T  4796186 gtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattgattttgggggccaaaactgccacaggtgcaaaactta 4796271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 14449430 - 14449599
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||| |||| || ||||||||| ||||||||||||||| | |||| ||||||||||||||||  || ||||||||||| ||| ||||||    
T  14449430 gtggcacctcacttatggtgccacgtcagcgtaaaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagggagcggttttgt 14449529  T
Q  101 ag-nnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcc 169  Q
    ||         |||| | | |||||||||  ||||||| |||||||  ||||||||||||||||||||||    
T  14449530 agttttttttccttaagaggccaaaatcgcaactttggaaaagttagggggctaaaactactattaagcc 14449599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 51371631 - 51371530
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||| |||||||| || ||||| |||||||||||||||||||||||||| || ||||||||||| || || |||||||| ||||| |||||||    
T  51371631 gtggcacctcatttagggtgccacgtcagtgtagaccgagtcaaaattgacattgggggtcaaaactgccatatatgcaaaacttaaggggcaattttgt 51371532  T
Q  101 ag 102  Q
    ||    
T  51371531 ag 51371530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 12719591 - 12719763
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||| ||||| ||  ||||||||||||||||||||||||   |||||||||||||||||||||  || ||||||||||||| | ||||||    
T  12719591 gtggcacctcacttggggtgccacatcagcgtagaccgagtcaaaattggtcttggaggccaaaactgccacagatgcaaaacttagggggtggttttgt 12719690  T
Q  101 ag-nnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagccttt 172  Q
    ||         |||||||| |||||||    |||||||||||||||  ||| ||||||| |||||||||||||    
T  12719691 agtttttttttcttagggggccaaaatatcaactttgggaaagttagggggttaaaactgctattaagccttt 12719763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 43074734 - 43074825
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggc 92  Q
    |||||||||||||||||||| || |||||||||||| |||||||||||| | |||| ||||||||||||||||  || ||||||||||||||    
T  43074734 gtggcacctcacttagggtgccacgtcagcgtagactgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggc 43074825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 10059846 - 10059944
Alignment:
Q  4 gcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||||||||||||||| || |||| |||||||||||||||||||| | |||  ||||||||||||||||  || ||||||||||||||| ||||||||    
T  10059846 gcacctcacttagggtgccacgtcaacgtagaccgagtcaaaattggccttgagggccaaaactgccacagatgcaaaacttagggggcggttttgtag 10059944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 16292432 - 16292335
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacat-tggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||||| | || ||||| |||||||||||||||||| |||| ||| |||||||||||||||||||| ||||||||| ||||||||||||||    
T  16292432 cacctcacttagggggccacgtcagtgtagaccgagtcaaaatt-acatatgggggccaaaactgccacatgtgcaaaacttagagggcgattttgtag 16292335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 31553391 - 31553489
Alignment:
Q  4 gcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||||||||||||||| |  || |||||||||||||||||||||| | |||| |||||||||||||| |  ||||||| |||||||||||||||||||    
T  31553391 gcacctcacttagggtgccgcgttagcgtagaccgagtcaaaattggccttgggggccaaaactgccatagatgtaaaatttagggggcgattttgtag 31553489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 23759720 - 23759889
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || |||||| |||| ||||||||||||| | |||||||||||||||| ||||  |  |||||||||||| || ||||||    
T  23759720 gtggcacctcacttagggtgccacgtcagcttagatcgagtcaaaattggccttggaggccaaaactgtcacagatacaaaacttaggggacggttttgt 23759819  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcctt 171  Q
    ||        ||||||||||||||||||  |||||  ||||||||| ||| ||||| |  |||||||||||    
T  23759820 ag-tttttttcttaggggaccaaaatcgcaactttatgaaagttaaggggttaaaattgttattaagcctt 23759889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 25909655 - 25909486
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||| || ||||| |||| || ||||||||||||||||||||||||| | |||| |||||||||  ||||| ||| ||||||||||||||| |||| |    
T  25909655 gtggcatcttacttaaggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaacctccacaagtgcaaaacttagggggcggttttat 25909556  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    ||        |||||||| ||||||||   ||||||| |||||||  ||| ||||||| |||||||||||    
T  25909555 agttttttttcttagggggccaaaatcacaactttggaaaagttagggggttaaaactgctattaagcct 25909486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 34567762 - 34567848
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttag 87  Q
    ||||||| |||||| |||||||| |||||| | ||||||||| ||||||||||||| ||||||||||||||||| || |||||||||    
T  34567762 gtggcacttcactttgggtgtcacgtcagcattgaccgagtcgaaattgacattgggggccaaaactgccacatatgcaaaacttag 34567848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 2837067 - 2836966
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || ||||| |||||| |||||||||||| | |||| ||||||||||  ||||  || ||||||||||||||| ||||||    
T  2837067 gtggcacctcacttagggtgccacgtcagtgtagactgagtcaaaattggccttgggggccaaaactctcacacatgcaaaacttagggggcggttttgt 2836968  T
Q  101 ag 102  Q
    ||    
T  2836967 ag 2836966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 21597548 - 21597649
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||    |||| ||||||||||||||||| || |||| ||||||| || ||||||    
T  21597548 gtggcacctcatttagggtgccacgtcagcgtagaccgagtcaaaattagttttgggggccaaaactgccacatatgcaaaatttaggggacggttttgt 21597647  T
Q  101 ag 102  Q
    ||    
T  21597648 ag 21597649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 44356548 - 44356711
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtagnn 104  Q
    |||||||||||||||| || || | |||||||| |||||||||||   |||| ||||||||||||||||| || ||||||||||||||| |||||||       
T  44356548 cacctcacttagggtgccacgttatcgtagaccaagtcaaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggttttgta-at 44356646  T
Q  105 nnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
          |||||| | |||||||||  |||||| ||||||| | ||||||||||| |||||||||||    
T  44356647 ttttttcttaggcggccaaaatcgcaactttgagaaagtt-aggggctaaaactgctattaagcct 44356711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6614990 - 6615038
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattg 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6614990 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattg 6615038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 8965672 - 8965759
Alignment:
Q  11 acttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgatttt 98  Q
    |||||||||| ||  ||| ||||||||||||||||||||||||||| | ||||||||||||||  || ||||||||||||||| ||||    
T  8965672 acttagggtgccacatcaacgtagaccgagtcaaaattgacattggggaccaaaactgccacagatgcaaaacttagggggcggtttt 8965759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 49185737 - 49185565
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||| ||||||||| || ||||||||||||| ||||||||||| | |||| |||||||||||||||| | |     ||||||||||| ||||||    
T  49185737 gtggcacctcgcttagggtgccacgtcagcgtagaccaagtcaaaattggccttgggggccaaaactgccacaag-gggggccttagggggcggttttgt 49185639  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcctttaat 175  Q
    ||        |||||||| |||||||||  || ||||||||||||  ||| ||||||| |||||||||| |||||    
T  49185638 agttttttttcttagggggccaaaatcgcaac-ttgggaaagttagggggttaaaactgctattaagcccttaat 49185565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 21451625 - 21451525
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||  | || | |||||||||||||||| ||| |||| ||||| | || ||||||    
T  21451625 gtggcacctcacttagggtgtcacgtcagtgtagaccgagtcaaaattcgcctt-gtggccaaaactgccacaagtgcaaaatttaggagacgtttttgt 21451527  T
Q  101 ag 102  Q
    ||    
T  21451526 ag 21451525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 21871537 - 21871634
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||| ||||||| |||||||||||||||||||||||| ||||||||  |||| |||||||||| ||| |  || |||||||||| |||| ||||||||    
T  21871537 caccccacttagagtgtcatgtcagcgtagaccgagttaaaattgattttgggggccaaaactaccaaagatgcaaaacttaggaggcggttttgtag 21871634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 21927398 - 21927495
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||| ||||||| |||||||||||||||||||||||| ||||||||  |||| |||||||||| ||| |  || |||||||||| |||| ||||||||    
T  21927398 caccccacttagagtgtcatgtcagcgtagaccgagttaaaattgattttgggggccaaaactaccaaagatgcaaaacttaggaggcggttttgtag 21927495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 35383905 - 35384006
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||| |||| || |||| |||||||||| ||||||||| | |||| ||||||||||||||   ||| |||||||||| |||||||| ||    
T  35383905 gtggcacctcacttacggtgccacgtcaacgtagaccgaatcaaaattggccttgggggccaaaactgccaatagtgcaaaacttaggaggcgatttcgt 35384004  T
Q  101 ag 102  Q
    ||    
T  35384005 ag 35384006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 47999697 - 47999596
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||| |||| || ||||||||||||||| ||||||||| | || | || |||||||||||||  ||||||||||| || ||| ||||||    
T  47999697 gtggcacctcacttaaggtgccacgtcagcgtagaccgaatcaaaattggccttaggggtcaaaactgccacagatgtaaaacttatggagcggttttgt 47999598  T
Q  101 ag 102  Q
    ||    
T  47999597 ag 47999596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 29697685 - 29697590
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    |||||||||||||||| || |||||||||||| | |||||||||| | |||||  ||||||||||||||  || ||||||||||||||| |||||||    
T  29697685 cacctcacttagggtgccacgtcagcgtagactgggtcaaaattggccttgga-accaaaactgccacagatgcaaaacttagggggcggttttgta 29697590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 6207347 - 6207421
Alignment:
Q  28 agcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||| ||||||||||||| |||| |||||||| |||||||  || ||||||||||||||| ||||||||    
T  6207347 agcgtagaccaagtcaaaattgaccttgggggccaaaattgccacaaatgcaaaacttagggggcggttttgtag 6207421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 53924904 - 53924994
Alignment:
Q  8 ctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgatttt 98  Q
    ||||||||||||||||  ||| |||||||||||||||||||||| |||  || |||||||| ||||  || ||||||||||||| ||||||    
T  53924904 ctcacttagggtgtcacatcaacgtagaccgagtcaaaattgaccttgagggtcaaaactgtcacaaatgcaaaacttagggggagatttt 53924994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 54855471 - 54855405
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaact 67  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| | |||| | ||||||||    
T  54855471 gtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggctttggggaccaaaact 54855405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 170
Target Start/End: Complemental strand, 11824354 - 11824187
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    ||||||||||||||||||| ||  ||||||||||| |||||||||||| | |||| | ||||||||||||||  || |||||||| |||||| |||||||    
T  11824354 tggcacctcacttagggtgccacatcagcgtagactgagtcaaaattggccttgg-gaccaaaactgccacacatgcaaaactta-ggggcggttttgta 11824257  T
Q  102 g-nnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    |         ||||||| |||||||||   ||||| |||||||||  ||| ||||||| |||||||||||    
T  11824256 gtttttgtttcttagggaaccaaaatcacaactttaggaaagttagggggttaaaactgctattaagcct 11824187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 21322857 - 21322944
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagg 88  Q
    |||||| |||| |||| |||||  || |||||||||||||||||||||| |||||| || |||||||| ||||| || ||||||||||    
T  21322857 gtggcatctcatttagagtgtcgcgttagcgtagaccgagtcaaaattggcattgggggtcaaaactgtcacatatgcaaaacttagg 21322944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 51233648 - 51233483
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactg-ccacatgtgtaaaacttagggggcgattttg 99  Q
    |||||||||||||||||||| || ||||||||||||| |||| |||||| | |||| ||||||||||| ||||  ||| |||||||||| |||| | |||    
T  51233648 gtggcacctcacttagggtgccacgtcagcgtagaccaagtccaaattggc-ttgggggccaaaactgtccacgagtgcaaaacttaggaggcggtattg 51233550  T
Q  100 tagnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaag 167  Q
    |||        |||||  | |||||||||  ||||| | |||||||| |||||||||||| |||||||    
T  51233549 tagtttcttttcttagaag-ccaaaatcgcaacttttgaaaagttaaggggctaaaactattattaag 51233483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 50769531 - 50769366
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||| ||||||  | |||||||||| |||||||||||||||| || | ||| |||||||||| |  || |||||||| |||||| ||||||    
T  50769531 gtggcacctcactcagggtgctacgtcagcgtaggccgagtcaaaattgaccttaggggctaaaactgccatagatgcaaaactta-ggggcggttttgt 50769433  T
Q  101 ag-nnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaa 166  Q
    ||         ||||||||  ||||||||  |||||||||||||||  ||| ||||||| |||||||    
T  50769432 agtttttttttcttaggggggcaaaatcgcaactttgggaaagttagggggataaaactgctattaa 50769366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 14060873 - 14060938
Alignment:
Q  25 gtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggg 90  Q
    |||||| |||||||||||||||||  | |||| ||||||||||||||||  |||||||||||||||    
T  14060873 gtcagcatagaccgagtcaaaattagccttgggggccaaaactgccacagatgtaaaacttagggg 14060938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 27978859 - 27978774
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaactta 86  Q
    ||||||| |||| | ||||| || ||||||||||||||||||||||||| | |||| || |||||||||||||  || ||||||||    
T  27978859 gtggcacttcacgtggggtgccacgtcagcgtagaccgagtcaaaattggccttgggggtcaaaactgccacaaatgcaaaactta 27978774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 8070793 - 8070721
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccaca 73  Q
    |||||||||||||| ||||| || ||||||||||||| ||| ||||||||  | || ||||||||||||||||    
T  8070793 gtggcacctcacttggggtgccacgtcagcgtagaccaagttaaaattgatctagggggccaaaactgccaca 8070721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5344438 - 5344395
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  5344438 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 5344395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22159974 - 22160017
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  22159974 gtggcacctcacttagggtgccatgtcagcgttgaccgagtcaa 22160017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35083726 - 35083769
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  35083726 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 35083769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 51537761 - 51537804
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  51537761 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 51537804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 54607055 - 54607012
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  54607055 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 54607012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 1571559 - 1571481
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaac 83  Q
    |||||||||||||||| || ||||| |||| ||||||| ||||||   ||||| |||||||||||||||| || |||||    
T  1571559 cacctcacttagggtgccacgtcagtgtaggccgagtctaaattggttttggaagccaaaactgccacatatgcaaaac 1571481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 42526109 - 42526155
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaat 47  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  42526109 gtggcacctcacttagggtgtcacgtcagtgtagactgagtcaaaat 42526155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 26089637 - 26089537
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||| |||||||||||| || |||||||||| | |||||||||||| | || | | ||||||||| ||||  ||||||||||| |||||  ||||||    
T  26089637 gtggcacttcacttagggtgccacgtcagcgtagtctgagtcaaaattggcctttg-gaccaaaactgtcacagatgtaaaacttaaggggctgttttgt 26089539  T
Q  101 ag 102  Q
    ||    
T  26089538 ag 26089537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 14016868 - 14016792
Alignment:
Q  26 tcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||| |||||| ||||||||||  | |||||||||||||||||||||  |  |||||||| |||||| ||||||||    
T  14016868 tcagcctagaccaagtcaaaattagccttggaggccaaaactgccacaaatacaaaacttaaggggcggttttgtag 14016792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 20118053 - 20118133
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaactt 85  Q
    |||||||||||||||| || ||| ||||||| ||| |||||||||   |||| ||||||||||| ||||| || |||||||    
T  20118053 cacctcacttagggtgccacgtccgcgtagatcgaatcaaaattggtcttgggggccaaaactggcacatatgcaaaactt 20118133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 104368 - 104325
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  104368 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 104325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 232837 - 232880
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  232837 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 232880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6386899 - 6386856
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  6386899 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 6386856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7119762 - 7119719
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  7119762 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 7119719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7666343 - 7666386
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  7666343 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 7666386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7705758 - 7705715
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| ||||||||||| || ||||||||    
T  7705758 gtggcacctcacttagggtgccatgtcagcgttgatcgagtcaa 7705715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8891822 - 8891779
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  8891822 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 8891779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17554213 - 17554170
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  17554213 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 17554170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28982081 - 28982038
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  28982081 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 28982038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 29432192 - 29432235
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  29432192 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 29432235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31250646 - 31250603
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  31250646 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 31250603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34158618 - 34158661
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  34158618 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 34158661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37973681 - 37973638
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  37973681 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 37973638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 39946223 - 39946266
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  39946223 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 39946266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40351004 - 40350961
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  40351004 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 40350961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 41205641 - 41205684
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  41205641 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 41205684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41707886 - 41707843
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||| |||||||||||||||| |||||||| |||||||||||    
T  41707886 gtggcatctcacttagggtgtcacgtcagcgttgaccgagtcaa 41707843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44921782 - 44921739
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||    
T  44921782 gtggcacctcacttagggtgtcacgtcagcgttgactgagtcaa 44921739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 51696700 - 51696661
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  51696700 cacctcacttagggtgtcacgtcagcgttgaccgagtcaa 51696661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 52114303 - 52114260
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  52114303 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 52114260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 52310947 - 52310990
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  52310947 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 52310990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 54216102 - 54216145
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  54216102 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 54216145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 55586784 - 55586741
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  55586784 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 55586741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 8483006 - 8483048
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||| || |||||||| |||||||||||    
T  8483006 tggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 8483048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 17221469 - 17221427
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||| || |||||||| |||||||||||    
T  17221469 tggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 17221427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 20466552 - 20466510
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||| || |||||||| |||||||||||    
T  20466552 tggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 20466510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 20473878 - 20473836
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||| || |||||||| |||||||||||    
T  20473878 tggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 20473836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 28159188 - 28159146
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||| || |||||||| |||||||||||    
T  28159188 tggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 28159146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 39907257 - 39907299
Alignment:
Q  29 gcgtagaccgagtcaaaattgacattggaggccaaaactgcca 71  Q
    |||| |||||||||||||||||| |||| ||||||||||||||    
T  39907257 gcgttgaccgagtcaaaattgaccttgggggccaaaactgcca 39907299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 51537583 - 51537620
Alignment:
Q  7 cctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  51537583 cctcacttagggtgtcacgtcagcgttgaccgagtcaa 51537620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 52462938 - 52463034
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||| |||||||| ||||| |||||||| || |||||||   |||| ||||||||||| || |  || |||||||| |||||| ||||||||    
T  52462938 cacctcactttgggtgtcacgtcagtgtagaccgggttaaaattggttttgggggccaaaactgtcatagatgcaaaacttaaggggcg-ttttgtag 52463034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 2837103 - 2837147
Alignment:
Q  58 ggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||| |||  |||||||||||||||||| ||||||||    
T  2837103 ggccaaaactgctacaattgtaaaacttagggggcggttttgtag 2837147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18937386 - 18937434
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattg 49  Q
    |||| ||||||||||||||| || |||||| |||||||||| |||||||    
T  18937386 gtggtacctcacttagggtggcacgtcagcatagaccgagtaaaaattg 18937434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34771418 - 34771466
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattg 49  Q
    |||||||||||||||||||| ||  ||| ||||||| ||||||||||||    
T  34771418 gtggcacctcacttagggtgccacatcaacgtagacggagtcaaaattg 34771466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35835922 - 35835966
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaa 45  Q
    ||||||||||||||| |||| || |||||||| ||||||||||||    
T  35835922 gtggcacctcacttaaggtgccacgtcagcgttgaccgagtcaaa 35835966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 37831732 - 37831660
Alignment:
Q  29 gcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    |||| |||||||||||||||| | | ||||| ||||||||||||  |   ||||||||||||||| |||||||    
T  37831732 gcgttgaccgagtcaaaattggcctaggagggcaaaactgccactagatcaaaacttagggggcggttttgta 37831660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 38371412 - 38371452
Alignment:
Q  4 gcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||| || |||||||| |||||||||||    
T  38371412 gcacctcacttagggtgccacgtcagcgttgaccgagtcaa 38371452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 39136442 - 39136482
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagt 41  Q
    |||||||||||||||||||| || |||||||| ||||||||    
T  39136442 gtggcacctcacttagggtgccacgtcagcgttgaccgagt 39136482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 52865515 - 52865447
Alignment:
Q  34 gaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||||||| | |  | ||||||||||| |||||| | ||||||||||||||| || |||||    
T  52865515 gaccgagtcaaaattggcctacggggccaaaactggcacatgggcaaaacttagggggcggttctgtag 52865447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 5e-38; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 5 - 173
Target Start/End: Complemental strand, 3377665 - 3377497
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtagnn 104  Q
    |||||||||||||| |||| ||||||||||||||||||||||||| | |||| ||||||||||||||||  || ||||||||||||||| ||||||||      
T  3377665 cacctcacttagggcgtcacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagtt 3377566  T
Q  105 nnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagccttta 173  Q
          |||||||| |||||||||  ||||||| |||||||  ||||||||||| ||||||||||||||    
T  3377565 ttttttcttagggggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagccttta 3377497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 7579832 - 7579661
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||  | |||| ||| |||| ||||||| ||| ||||||||| ||||| ||||||    
T  7579832 gtggcacctcacttagggtgccatgtcagcgtagaccgagtcaaaattagctttgggggcaaaaattgccacaagtgcaaaacttagcgggcggttttgt 7579733  T
Q  101 agnnnnnnnnctta-ggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcctt 171  Q
    ||        |||| |||| |||||||||  ||||| |||||||||| ||| ||||||| ||||||| ||||    
T  7579732 agttttttttcttaggggggccaaaatcgcaacttttggaaagttaaggggttaaaactgctattaaacctt 7579661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 41997787 - 41997876
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggg 90  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||  || ||| ||||||||    
T  41997787 gtggcacctcacttagggtgtcacgtcagcgtagaccgagtcaaaattggccttggaggccaaaactgccacagatgcaaagcttagggg 41997876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 17760852 - 17760679
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||| |||||||| || ||||| ||||||||||||||||||||  |||| ||||||||||||||||| || ||||||||||||| | ||||||    
T  17760852 gtggcacctcatttagggtgccacgtcagtgtagaccgagtcaaaattgatcttggtggccaaaactgccacatatgcaaaacttagggggtggttttgt 17760753  T
Q  101 ag--nnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagccttt 172  Q
    ||          |||||||| |||||||||  |||||| | ||||||  |||||||| || |||||||||||||    
T  17760752 agttttttttttcttagggggccaaaatcgcaactttgaggaagttagggggctaaagctgctattaagccttt 17760679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 16874649 - 16874750
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| | ||||  |||||||||||||||  || |||||||| |||||| ||||||    
T  16874649 gtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggagccaaaactgccacagatgcaaaacttatggggcggttttgt 16874748  T
Q  101 ag 102  Q
    ||    
T  16874749 ag 16874750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 23220734 - 23220633
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || ||||||||||||||| |||||||||   |||| ||||||||| |||||||||| |||||||| |||||| ||||||    
T  23220734 gtggcacctcacttagggtgccacgtcagcgtagaccgaatcaaaattggtcttgggggccaaaaccgccacatgtgcaaaacttaaggggcggttttgt 23220635  T
Q  101 ag 102  Q
    ||    
T  23220634 ag 23220633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 44672480 - 44672380
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||| |||||||||||| || ||||||||||||||| ||||||||||  ||||  |||||||||||||||| || ||||||||||||||| ||||||    
T  44672480 gtggcacttcacttagggtgccacgtcagcgtagaccgaatcaaaattgatcttgggcgccaaaactgccacatatgcaaaacttagggggcggttttgt 44672381  T
Q  101 a 101  Q
    |    
T  44672380 a 44672380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 16298203 - 16298300
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgatttt 98  Q
    |||||||||||||||| |||||| ||||||||||||| |||||||||||| |||||  |||||||||||||||  || ||||| |||||||| |||||    
T  16298203 gtggcacctcacttagagtgtcacgtcagcgtagaccaagtcaaaattgatattgggagccaaaactgccacagatgcaaaacatagggggcaatttt 16298300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 39642354 - 39642455
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||| |||||||||||| |  |||||| |||||||||||||||||| | |||| ||||||||||||||||  || ||||||||||||||| ||||||    
T  39642354 gtggcacttcacttagggtgccgcgtcagcatagaccgagtcaaaattggctttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgt 39642453  T
Q  101 ag 102  Q
    ||    
T  39642454 ag 39642455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 45739103 - 45739002
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || || ||| |||||||||||||||||||| |||| |||||||||||||| |  || |||||||| |||||| ||||||    
T  45739103 gtggcacctcacttagggtgccacgttagcatagaccgagtcaaaattgactttgggggccaaaactgccatagatgcaaaacttaaggggcggttttgt 45739004  T
Q  101 ag 102  Q
    ||    
T  45739003 ag 45739002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 50401538 - 50401412
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||| ||| ||||||| ||||| ||||||||||||||||||| | |||| ||||||||||| ||||  || ||||||||||||||| ||||||    
T  50401538 gtggcacctcatttaaggtgtcacgtcagagtagaccgagtcaaaattggccttgg-ggccaaaactgtcacaaatgcaaaacttagggggcggttttgt 50401440  T
Q  101 agnnnnnnnncttaggggaccaaaatcg 128  Q
    ||        ||||||||||||||||||    
T  50401439 agttatatttcttaggggaccaaaatcg 50401412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 167
Target Start/End: Complemental strand, 1096630 - 1096469
Alignment:
Q  6 acctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtagnnn 105  Q
    |||||||||||| || || |||||||||||||||||||||||||||  | | ||||||||||||||||  ||  |||||||| ||||| ||||||         
T  1096630 acctcacttaggatgccacgtcagcgtagaccgagtcaaaattgaccctaggggccaaaactgccacagatgcgaaacttagagggcggttttgttagtt 1096531  T
Q  106 nnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaag 167  Q
          |||||||||||||||||  ||||||| |||||||| |||||||||||  |||||||    
T  1096530 ttttttttaggggaccaaaatcgcaactttggaaaagttaaggggctaaaactgttattaag 1096469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 12960991 - 12961092
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| | || |  |||||||||||||||  || |||| ||||||| | |||||||    
T  12960991 gtggcatctcacttagggtgtcacgtcagcgtagaccgagtcaaaattggcctttggagccaaaactgccacagttgcaaaatttaggggacaattttgt 12961090  T
Q  101 ag 102  Q
    ||    
T  12961091 ag 12961092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 14190688 - 14190789
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||| |||||| ||| ||  |||||||||||||||||||||||| |||||||||||||||||||||||  || ||||||| | ||||  ||||||    
T  14190688 gtggcaccttacttagagtgccacatcagcgtagaccgagtcaaaattggcattggaggccaaaactgccacagatgcaaaacttcgagggcctttttgt 14190787  T
Q  101 ag 102  Q
    ||    
T  14190788 ag 14190789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 14978964 - 14978863
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| ||  |||||||||||| | ||||||||| | || | |||||||||| ||||| ||| ||||||||||||||  ||||||    
T  14978964 gtggcacctcacttagggtgccacatcagcgtagaccaattcaaaattggcctttggggccaaaactaccacaggtgcaaaacttagggggcagttttgt 14978865  T
Q  101 ag 102  Q
    ||    
T  14978864 ag 14978863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 25486381 - 25486285
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgatttt 98  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||||  || | ||||||||| ||||||  || ||||||||| ||||||||||    
T  25486381 gtggcacctcatttagggtgccacgtcagcgtagaccgagtcaaaattgaacttaggggccaaaac-gccacagatgcaaaacttagagggcgatttt 25486285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 49426143 - 49426223
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaactta 86  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||| |||||| ||||||||||||||||  || ||||||||    
T  49426143 caccttacttagggtgtcacgtcagcgtagaccaagtcaaaattggcattgg-ggccaaaactgccacaaatgcaaaactta 49426223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 50226537 - 50226638
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || |||||||||||||||||||| |||  | || | |||||||||||| ||| ||| ||||||||| ||||| ||| ||    
T  50226537 gtggcacctcacttagggtgccacgtcagcgtagaccgagtcaatattagccttcggggccaaaactgctacaggtgcaaaacttagagggcggtttagt 50226636  T
Q  101 ag 102  Q
    ||    
T  50226637 ag 50226638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 6569658 - 6569754
Alignment:
Q  6 acctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||||||||| ||| || ||||||||||||||| |||||||||   |||  ||||||||||||||||  ||||||||||| |||||| ||||||||    
T  6569658 acctcacttagagtgccacgtcagcgtagaccgaatcaaaattggtcttgagggccaaaactgccacaaatgtaaaacttaaggggcggttttgtag 6569754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 32295099 - 32295267
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||| |||||||| || ||| | ||||||||||| ||||||| | |||| ||||||||||| ||||  ||||||||||||| || | ||||||    
T  32295099 gtggcacctcatttagggtgccacgtccgggtagaccgagttaaaattggctttgggggccaaaactgtcacaaatgtaaaacttaggtggtggttttgt 32295198  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcc 169  Q
    |         ||||||||  ||||||||  ||||||  |||||| | ||||||||||| ||||||||||    
T  32295199 aattttttttcttagggggtcaaaatcgcaactttgaaaaagtttaggggctaaaactcctattaagcc 32295267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 5287374 - 5287457
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaactt 85  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||| || | |||||||||  |||||| || |||||||    
T  5287374 tggcacctcacttagggtgccacgtcagcgtggaccgagtcaaaattgaccttcggggccaaaacatccacatatgcaaaactt 5287457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 18632481 - 18632382
Alignment:
Q  3 ggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||||||| ||||||||| | ||||||||||| ||||||||||||||   ||| ||||||||||| ||||  || ||||||||| |||| |||||||||    
T  18632481 ggcacctcatttagggtgttacgtcagcgtagatcgagtcaaaattgatcctgggggccaaaactgtcacaaatgcaaaacttagagggcaattttgtag 18632382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 25085539 - 25085640
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || ||||| |||||||| |||||||||||  |||  |||||||||||||||| ||  ||||||| ||| |||  |||||    
T  25085539 gtggcacctcacttagggtgccacgtcagtgtagaccgggtcaaaattgatcttgagggccaaaactgccacaggtacaaaacttggggtgcggatttgt 25085638  T
Q  101 ag 102  Q
    ||    
T  25085639 ag 25085640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 44436924 - 44436836
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggg 90  Q
    ||||||||||||||||||||  | || |||||||| ||||||||||||||| |||| || |||||||| |||| ||| ||||||||||||    
T  44436924 gtggcacctcacttagggtgcgacgtaagcgtagatcgagtcaaaattgaccttgg-gggcaaaactgtcacaagtgcaaaacttagggg 44436836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 46572992 - 46572893
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||||||| |||  |||||||||||| ||||||||||| | |||| |||| |||||||||||  || |||||||||||| || ||||||    
T  46572992 gtggcacctcacttagggtctcacatcagcgtagaccaagtcaaaattggccttgg-ggcc-aaactgccacaaatgcaaaacttaggggacggttttgt 46572895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 20224677 - 20224749
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccaca 73  Q
    |||| |||||| |||||||| || |||||||||||| |||||||||||| |||||  ||||||||||||||||    
T  20224677 gtggtacctcatttagggtgccacgtcagcgtagacagagtcaaaattgtcattgagggccaaaactgccaca 20224749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 16545726 - 16545628
Alignment:
Q  3 ggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    ||||||||||||||||||  | |||||| |||||||||||||||||  |||||| ||| ||||||| || |  || |||||||| ||||| ||||||||    
T  16545726 ggcacctcacttagggtgctacgtcagcatagaccgagtcaaaattaccattgggggcaaaaactgtcatagatgcaaaacttaaggggcaattttgta 16545628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 46912337 - 46912407
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgcca 71  Q
    ||||||||||| |||||||| || ||||||||| || |||||||||||| |||| | ||||||||||||||    
T  46912337 gtggcacctcatttagggtgccacgtcagcgtaaacagagtcaaaattggcattaggggccaaaactgcca 46912407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 15659137 - 15659238
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||| |||||||||||||||||  || | |||||| |||||||||||||   |||  ||||||||  ||||||| || ||||||| ||||||||||||||    
T  15659137 gtggaacctcacttagggtgtctcgttaacgtagatcgagtcaaaattggtcttgagggccaaaatcgccacatatgcaaaactttgggggcgattttgt 15659236  T
Q  101 ag 102  Q
    ||    
T  15659237 ag 15659238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 30849376 - 30849477
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||||||||| | |||||| |||||| ||| ||||||| | |||  ||||||||||  ||||  || |||||||||||| || ||||||    
T  30849376 gtggcacctcacttagggtgttacgtcagcatagaccaagttaaaattggccttgtgggccaaaactatcacagatgcaaaacttaggggacggttttgt 30849475  T
Q  101 ag 102  Q
    ||    
T  30849476 ag 30849477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 7060787 - 7060834
Alignment:
Q  3 ggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattga 50  Q
    |||||||||||||||||| || ||||| ||||||||||||||||||||    
T  7060787 ggcacctcacttagggtgccacgtcagtgtagaccgagtcaaaattga 7060834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 8301497 - 8301592
Alignment:
Q  7 cctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||| ||||||||||| |||||||||||  ||||||||||||   |||| || |||||||||||||  || |||| ||||||| || ||||||||    
T  8301497 cctcaattagggtgtcacgtcagcgtagattgagtcaaaattggtcttgggggtcaaaactgccacagatgcaaaatttaggggacggttttgtag 8301592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33811593 - 33811550
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  33811593 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 33811550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34988258 - 34988215
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  34988258 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 34988215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 52149685 - 52149642
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  52149685 gtggcacctcacttagggtgccatgtcagcgttgaccgagtcaa 52149642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 17692887 - 17692794
Alignment:
Q  7 cctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    ||||||||||||||||| |||||||||||| ||||||||| || | |||| |   ||||| ||||||  || |||||||| ||||||||||||||    
T  17692887 cctcacttagggtgtcacgtcagcgtagactgagtcaaaa-tggccttggggatgaaaaccgccacaaatgcaaaacttaaggggcgattttgta 17692794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 46351274 - 46351232
Alignment:
Q  29 gcgtagaccgagtcaaaattgacattggaggccaaaactgcca 71  Q
    |||| |||||||||||||||||| |||||||||||||||||||    
T  46351274 gcgttgaccgagtcaaaattgactttggaggccaaaactgcca 46351232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 23891797 - 23891854
Alignment:
Q  17 ggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacat 74  Q
    ||||||| |||||||||||||||||||||||||   ||||  ||||||||||||||||    
T  23891797 ggtgtcacgtcagcgtagaccgagtcaaaattggtcttgggagccaaaactgccacat 23891854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 46505316 - 46505385
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgcc 70  Q
    ||||||||||||||||||||||| |||| |||| |||||| ||||||||   |||| ||||| |||||||    
T  46505316 gtggcacctcacttagggtgtcacgtcaacgtaaaccgagccaaaattggtcttgggggccagaactgcc 46505385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 48319571 - 48319470
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||||| || || |||||||| ||  |||||||||||||| |||| || |||||||| || |  || |||| ||| ||||||||| |||    
T  48319571 gtggcacctcacttaggatgccacgtcagcgttgatagagtcaaaattgaccttgggggtcaaaactgtcatagatgcaaaatttatggggcgattgtgt 48319472  T
Q  101 ag 102  Q
    ||    
T  48319471 ag 48319470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 14887 - 14926
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  14887 cacctcacttagggtgtcacgtcagcgttgaccgagtcaa 14926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2371344 - 2371301
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  2371344 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 2371301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4243298 - 4243255
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  4243298 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 4243255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6183150 - 6183107
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  6183150 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 6183107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8029127 - 8029084
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  8029127 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 8029084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13791744 - 13791701
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||    
T  13791744 gtggcacctcacttaaggtgtcacgtcagcgttgaccgagtcaa 13791701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15161443 - 15161486
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||    
T  15161443 gtggcacctcacttaaggtgtcacgtcagcgttgaccgagtcaa 15161486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20017550 - 20017507
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  20017550 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 20017507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20287893 - 20287936
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  20287893 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 20287936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28503303 - 28503260
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  28503303 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 28503260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31797210 - 31797253
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  31797210 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 31797253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 32558357 - 32558400
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||    
T  32558357 gtggcacctcacttagggtgtcacgtcagcgttgacagagtcaa 32558400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33871062 - 33871019
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  33871062 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 33871019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34867626 - 34867669
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  34867626 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 34867669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37029096 - 37029053
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  37029096 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 37029053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38622571 - 38622528
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  38622571 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 38622528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41585453 - 41585410
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  41585453 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 41585410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42407051 - 42407008
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  42407051 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 42407008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43914746 - 43914703
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  43914746 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 43914703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45885094 - 45885137
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  45885094 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 45885137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 46880889 - 46880936
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattg 49  Q
    |||||| |||||||||||| || |||||||||||||||||| ||||||    
T  46880889 tggcacatcacttagggtgccacgtcagcgtagaccgagtcgaaattg 46880936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 47113556 - 47113513
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  47113556 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 47113513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 47764259 - 47764216
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  47764259 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 47764216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 49056292 - 49056249
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  49056292 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 49056249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 49227261 - 49227331
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa-aattgacattggaggccaaaactgcca 71  Q
    |||||||||||||||||||| || ||||| || ||||||||||| ||||||| | |||| ||||||||||||    
T  49227261 gtggcacctcacttagggtgccacgtcagtgttgaccgagtcaacaattgac-tgggagtccaaaactgcca 49227331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 5225522 - 5225568
Alignment:
Q  25 gtcagcgtagaccgagtcaaaattgacattggaggccaaaactgcca 71  Q
    ||||||| ||||| ||||||||||||| |||| ||||||||||||||    
T  5225522 gtcagcgaagaccaagtcaaaattgaccttgggggccaaaactgcca 5225568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 8770609 - 8770651
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||| || |||||||| |||||||||||    
T  8770609 tggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 8770651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 8774464 - 8774422
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||| || |||||||| |||||||||||    
T  8774464 tggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 8774422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 23792928 - 23792970
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||| || |||||||| |||||||||||    
T  23792928 tggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 23792970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 50877727 - 50877773
Alignment:
Q  25 gtcagcgtagaccgagtcaaaattgacattggaggccaaaactgcca 71  Q
    |||||||| |||||||||||||||||  | |||||||||||||||||    
T  50877727 gtcagcgttgaccgagtcaaaattgatctaggaggccaaaactgcca 50877773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 52363325 - 52363367
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||| || |||||||| |||||||||||    
T  52363325 tggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 52363367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6320729 - 6320683
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattg 49  Q
    ||||||||||||||||  ||||| |||||||||||||||||| ||||||    
T  6320729 gtggcacctcacttag--tgtcacgtcagcgtagaccgagtcgaaattg 6320683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 35544896 - 35544843
Alignment:
Q  16 gggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgc 69  Q
    |||||||| ||||||| |||| ||||||||| ||| ||||| ||||||||||||    
T  35544896 gggtgtcacgtcagcgaagactgagtcaaaagtgatattggcggccaaaactgc 35544843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 3377769 - 3377825
Alignment:
Q  113 taggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcc 169  Q
    |||||| ||||||||   |||||||||||||||  ||||||||||| ||||||||||    
T  3377769 tagggggccaaaatcacaactttgggaaagttagggggctaaaactgctattaagcc 3377825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 8009880 - 8009796
Alignment:
Q  17 ggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    ||||||| ||||||||||| |||||||||||||   |||| || |||||||| ||||  || ||||||| ||| ||| |||||||    
T  8009880 ggtgtcacgtcagcgtagaacgagtcaaaattggtcttggtggtcaaaactgtcacagatgcaaaacttcgggagcggttttgta 8009796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 26861439 - 26861399
Alignment:
Q  4 gcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||| || |||||||| |||||||||||    
T  26861439 gcacctcacttagggtgccacgtcagcgttgaccgagtcaa 26861399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 39918602 - 39918434
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || ||||||| ||||||||||||||||| | |||| ||||||||| ||||||| || ||||||||| |||||||||||     
T  39918602 gtggcacctcacttagggtgccacgtcagcgaagaccgagtcaaaattggccttgggggccaaaacagccacatatgcaaaacttagcgggcgattttgc 39918503  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcc 169  Q
    ||        |||||||| |||||||||  |||||| ||||||||  ||||||||||||||||||||||    
T  39918502 agttttttttcttagggggccaaaatcgcaactttgagaaagttagggggctaaaactactattaagcc 39918434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 172
Target Start/End: Complemental strand, 43028960 - 43028791
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||| |  | ||||||||||||||||||  || ||||||||||||| | |||||||    
T  43028960 tggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccctagaggccaaaactgccacagatgcaaaacttaggggg-ggttttgta 43028862  T
Q  102 gnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagccttt 172  Q
    |        |||||||| |||||||||  |||||||  ||||||  ||||||||||| |||||||||||||    
T  43028861 gttttttttcttagggggccaaaatcgcaactttggagaagttagggggctaaaactgctattaagccttt 43028791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 5470483 - 5470650
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || |||||| |||||||||||||||||| | |||| ||||||||||||||||  ||||||||||| |||||| ||||||    
T  5470483 gtggcacctcacttagggtgccacgtcagcatagaccgagtcaaaattggccttgggggccaaaactgccacagatgtaaaacttaaggggcggttttgt 5470582  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    ||         ||||||| |||||||||  ||||| |||||||||  ||||||||||| |||| ||||||    
T  5470583 agttttttt--ttagggggccaaaatcgcaactttaggaaagttagggggctaaaactgctataaagcct 5470650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 14489381 - 14489205
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||| ||||||| ||  ||||||||||||||||||||||||   ||||||| ||||||||||||| ||| ||||||||||||||| ||||||    
T  14489381 gtggcacctcacgtagggtgccacatcagcgtagaccgagtcaaaattggtcttggaggtcaaaactgccacaggtgcaaaacttagggggcggttttgt 14489282  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcctttaattta 178  Q
    |         |||| ||| ||||||||   ||||| ||||||||| |||||||||||| |||||||||||||| ||||    
T  14489281 a-atttttttcttaaggggccaaaatcacaacttttggaaagttagagggctaaaactgctattaagcctttatttta 14489205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 37431711 - 37431610
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| | |||| ||||||||||||||||  || ||||||||| ||||||||||||    
T  37431711 gtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagtgggcgattttgt 37431612  T
Q  101 ag 102  Q
    ||    
T  37431611 ag 37431610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 34679265 - 34679095
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaactta-gggggcgattttg 99  Q
    |||||||||||||||||||| || |||||||||||||| |||||||||    ||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  34679265 gtggcacctcacttagggtgccacgtcagcgtagaccgggtcaaaatttgtcttggaggccaaaactgccacatgtgcaaaacttaggggggcggttttg 34679166  T
Q  100 tagnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcctt 171  Q
    ||         |||||| | |||||||||  ||||||| |||||||  ||||||||||| ||||||||||||    
T  34679165 ta-atttttttcttaggtggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcctt 34679095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2609235 - 2609336
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||| ||||||||||||| ||  |||||||||||||||||||||||||  |||| || |||||||||||||| ||||||||||| |||||||||||||    
T  2609235 gtggcaactcacttagggtgccacatcagcgtagaccgagtcaaaattgatcttgggggtcaaaactgccacatatgtaaaacttatggggcgattttgt 2609334  T
Q  101 ag 102  Q
    ||    
T  2609335 ag 2609336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 14943691 - 14943860
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||||  | |||| |||||||| ||||||| ||| ||||||||| ||||| ||||||    
T  14943691 gtggcacctcacttagggtgccacatcagcgtagaccgagtcaaaattagccttgggggccaaaaatgccacaggtgcaaaacttagagggcggttttgt 14943790  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagccttt 172  Q
    ||        |||| | ||||||||||   ||||||| |||||||| ||||||||||| |||||||||||||    
T  14943791 ag-tttttttctta-gagaccaaaatcacaactttggaaaagttaaggggctaaaactgctattaagccttt 14943860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 25333666 - 25333498
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||| |||||||||| || ||||||||||||| ||||||||||| | |||||| |||||||||||||| ||| ||||||||||||| | |||| |    
T  25333666 gtggcaccttacttagggtgccacgtcagcgtagaccaagtcaaaattggccttggagaccaaaactgccacaggtgcaaaacttagggggtggttttat 25333567  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    ||        |||| |||||||||||||  ||||||| |||||||| ||| ||||| |  ||||||||||    
T  25333566 ag-tttttttcttaagggaccaaaatcgcaactttggaaaagttaaggggttaaaattgttattaagcct 25333498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 32969716 - 32969624
Alignment:
Q  10 cacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||||||| |||| ||||||||||||||||||||||||| | ||||  |||||||||||||||  || ||||||||||||||||||||||||    
T  32969716 cacttagggcgtcacgtcagcgtagaccgagtcaaaattggccttgggagccaaaactgccacaaatgaaaaacttagggggcgattttgtag 32969624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 5362321 - 5362423
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgac-attggaggccaaaactgccacatgtgtaaaacttagggggcgattttg 99  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||||||| |  |||||||||||||||||||||  ||||||||||| ||| | ||||||    
T  5362321 gtggcacctcacttaggatgtcacgtcagcgtagactgagtcaaaattggcttttggaggccaaaactgccacagttgtaaaacttaagggacaattttg 5362420  T
Q  100 tag 102  Q
    |||    
T  5362421 tag 5362423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 44617889 - 44618053
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtagnn 104  Q
    ||||||| |||||||| || |||||||||||||||||||||||||   |||| ||||||||||||||||  || ||||||||||||||| |||||||       
T  44617889 cacctcatttagggtgccacgtcagcgtagaccgagtcaaaattggtcttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgta--a 44617986  T
Q  105 nnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcctt 171  Q
          |||| |||||||||||||  ||||   |||||||| |||| ||||||| ||||||||||||    
T  44617987 ttttttcttaagggaccaaaatcgcaacttcttgaaagttagagggttaaaactgctattaagcctt 44618053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 6592894 - 6592805
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggg 90  Q
    ||||||||||||||||||||  |||||||||||||| |||||||||||  |||||  ||||||||||||||||| || ||||||||||||    
T  6592894 gtggcacctcacttagggtgcaatgtcagcgtagactgagtcaaaattagcattgagggccaaaactgccacatatgcaaaacttagggg 6592805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 37803286 - 37803190
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||| |||||||||| || |||||||||||||||||||||||||||||||| || |||||||||||||  || |||||||||| |||| ||||||||    
T  37803286 caccttacttagggtgccacgtcagcgtagaccgagtcaaaattgacattgg-ggtcaaaactgccacaaatgcaaaacttaggaggcggttttgtag 37803190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 24472593 - 24472683
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttaggggg 91  Q
    |||||||||||||||||||| || || || |||||| |||||||||||| |||||| ||||||||||||||||  || |||||||||||||    
T  24472593 gtggcacctcacttagggtgccacgttagtgtagacggagtcaaaattggcattggcggccaaaactgccacagatgcaaaacttaggggg 24472683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 8553690 - 8553790
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||||||||||| |||||| ||||||||||| |||||||| ||||  | |||||||||||||  || |||||||| || ||||||||||    
T  8553690 gtggcacctcacttagggtgtcacgtcagcatagaccgagtc-aaattgactttgggagacaaaactgccacaaatgcaaaacttaaggtgcgattttgt 8553788  T
Q  101 ag 102  Q
    ||    
T  8553789 ag 8553790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 27489596 - 27489499
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||||||||||| || || ||||||||| ||||||||||||||| | |||||||||||||||||||||  || |||| ||||||||  |||||||||    
T  27489596 cacctcacttaggatgccacgtcagcgtaaaccgagtcaaaattgcccttggaggccaaaactgccacagatgcaaaagttagggggtaattttgtag 27489499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 34761011 - 34760914
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||||||| || |||||| ||||||  ||||||||||   |||| ||||||||||||||||| || ||||||||||||||| ||||||||    
T  34761011 cacctcacttagggtgccacgtcagcatagaccacgtcaaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtag 34760914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 41196376 - 41196461
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaactta 86  Q
    |||||||||||||||||||| || ||||||||||||| |||| ||||||||||||| ||| |||||| |||||| || ||||||||    
T  41196376 gtggcacctcacttagggtgccacgtcagcgtagaccaagtctaaattgacattgggggcaaaaacttccacatatgcaaaactta 41196461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 6510167 - 6510068
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || |||| | |||| ||| ||||||||||| ||||||||| |||||||||||| || |||| |||||||||| ||||||    
T  6510167 gtggcacctcacttagggtgccacgtcaacatagatcgattcaaaattgaccttggaggcc-aaactgccacatatgcaaaaattagggggcggttttgt 6510069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 5008434 - 5008520
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttag 87  Q
    |||||| ||||||||||||| || ||||||||||||||||||||||||||| |||  |||||||| |||||||  || |||||||||    
T  5008434 gtggcatctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgagggccaaaattgccacaaatgcaaaacttag 5008520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 31827694 - 31827592
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacatt-ggaggccaaaactgccacatgtgtaaaacttagggggcgattttg 99  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||  || || ||||||||||| ||||  || ||| ||||||||| |||||||    
T  31827694 gtggcacctcacttagggtgccacgtcagcgtagaccgaatcaaaattgattttggggggccaaaactggcacagatgcaaagcttagggggtgattttg 31827595  T
Q  100 tag 102  Q
    |||    
T  31827594 tag 31827592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 24306169 - 24306250
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaactta 86  Q
    |||||||||||||||||||  |||||||||| | ||||||||||||| |||| ||||| ||||| |||||||| ||||||||    
T  24306169 cacctcacttagggtgtcacatcagcgtagatcaagtcaaaattgaccttgggggccagaactgtcacatgtgcaaaactta 24306250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 8857214 - 8857114
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||| ||| |||| ||  ||||||| |||| ||||||||||| |||||| ||||||||||||||||  || |||||||||| |||| ||||||    
T  8857214 gtggcacctcatttaaggtgccacatcagcgttgaccaagtcaaaattggcattgggggccaaaactgccacaaatgcaaaacttaggaggcggttttgt 8857115  T
Q  101 a 101  Q
    |    
T  8857114 a 8857114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 19895761 - 19895845
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaactta 86  Q
    |||||||||||||||||||  | |||||| || ||||| ||||||||| |||||| ||| ||||||||||||| |||||||||||    
T  19895761 tggcacctcacttagggtgctacgtcagcataaaccgaatcaaaattggcattgggggctaaaactgccacatatgtaaaactta 19895845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4576689 - 4576756
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactg 68  Q
    |||||||||||||||||||| || | ||||||||||||||||||||||| || ||| |||||||||||    
T  4576689 gtggcacctcacttagggtgccacgccagcgtagaccgagtcaaaattggcagtgggggccaaaactg 4576756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 25411708 - 25411609
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    |||||| ||||||| |||| || |||||| ||||||||||||||||||  ||||| ||  ||||||||||||  || ||||||||||||||| |||||||    
T  25411708 tggcacatcacttatggtgccacgtcagcatagaccgagtcaaaattggtattgggggtgaaaactgccacagatgcaaaacttagggggcggttttgta 25411609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 18709401 - 18709456
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattgg 56  Q
    ||||||||||||||| ||||||| |||||| |||||||||| ||||||||||||||    
T  18709401 gtggcacctcacttaaggtgtcacgtcagcatagaccgagttaaaattgacattgg 18709456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 34100872 - 34100919
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaatt 48  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  34100872 gtggcacctcacttaaggtgtcatgtcagcgtagaccaagtcaaaatt 34100919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 36195726 - 36195773
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattg 49  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||    
T  36195726 tggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattg 36195773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 15023006 - 15022916
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacatt-ggaggccaaaactgccacatgtgtaaaacttagggg 90  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||| ||| | || || ||||||||||||||||  || |||| |||||||    
T  15023006 gtggcacctcaattagggtgccatgtcagcgtagactgagtcaaatttggccttggggggccaaaactgccacaaatgcaaaatttagggg 15022916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19206294 - 19206340
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaat 47  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||    
T  19206294 gtggcacctcacttaggatgtcatgttagcgtagaccgagtcaaaat 19206340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 4925607 - 4925506
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||| |||||||||| || |||||||||||| ||  ||||||||   || | || |||||||||||||| || |||||||||||| || ||||||    
T  4925607 gtggcaccttacttagggtgccacgtcagcgtagacagaaccaaaattggtcttaggggtcaaaactgccacatatgcaaaacttaggggacggttttgt 4925508  T
Q  101 ag 102  Q
    ||    
T  4925507 ag 4925506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 35718805 - 35718712
Alignment:
Q  9 tcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||| ||  ||| ||||||| |||||||||||| | |||||||||||||||||||||  || ||||  |||||| || ||||||||    
T  35718805 tcacttagggtgccacatcaccgtagactgagtcaaaattggccttggaggccaaaactgccacagatgcaaaatgtaggggacggttttgtag 35718712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 43028997 - 43029109
Alignment:
Q  58 ggccaaaactgccacatgtgtaaaacttagggggcgattttgtagnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaac 157  Q
    |||||||||||| |||  |||||||||||||||||| ||||||||        |||||||| |||||||||  |||||| ||||||| |||||| |||||    
T  43028997 ggccaaaactgctacaattgtaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgtgaaagtt-aagggcaaaaac 43029095  T
Q  158 tactattaagcctt 171  Q
    | ||||||| ||||    
T  43029096 tgctattaaacctt 43029109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 19399323 - 19399490
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||| ||||||||||||||| || ||||||||||||||||||||||||    |||||||||||| ||| || | ||| ||||||||  || || ||||||    
T  19399323 gtggaacctcacttagggtgccacgtcagcgtagaccgagtcaaaatt---cttggaggccaaagctgacataggtgcaaaacttaatggacggttttgt 19399419  T
Q  101 ag-nnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    ||         |||| ||||||||||||   ||||||  |||||||  ||||||||||| |||||||||||    
T  19399420 agttttttttacttaagggaccaaaatcacaactttgaaaaagttagggggctaaaactgctattaagcct 19399490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42445540 - 42445497
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || ||||||||||||||||||||    
T  42445540 gtggcacctcacttagggtgccacgtcagcgtagaccgagtcaa 42445497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 35921029 - 35921082
Alignment:
Q  18 gtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgcca 71  Q
    |||||| |||||||| |||||||||||||||||  | |||||||||||||||||    
T  35921029 gtgtcacgtcagcgttgaccgagtcaaaattgatctaggaggccaaaactgcca 35921082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 25438 - 25378
Alignment:
Q  111 cttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcctt 171  Q
    |||||||| |||||||||| |||||||||||||||  |||| ||||||  |||||||||||    
T  25438 cttagggggccaaaatcgtaactttgggaaagttagggggcaaaaactgttattaagcctt 25378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 36177109 - 36177045
Alignment:
Q  38 gagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||||| | ||||||||||||||||| | | | ||||||||||||| | ||||||||    
T  36177109 gagtcaaaattgacctaggaggccaaaactgccataggggcaaaacttagggggtggttttgtag 36177045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2936934 - 2936977
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  2936934 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 2936977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7464084 - 7464127
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||| | |||||||||||    
T  7464084 gtggcacctcacttagggtgtcacgtcagcattgaccgagtcaa 7464127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19025962 - 19026005
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  19025962 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 19026005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19256756 - 19256713
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  19256756 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 19256713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 59 - 102
Target Start/End: Complemental strand, 21361990 - 21361947
Alignment:
Q  59 gccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||    
T  21361990 gccaaaactgccacatgtgcaaaacttagggggtgtttttgtag 21361947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21552686 - 21552729
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  21552686 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 21552729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21568093 - 21568050
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  21568093 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 21568050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 24858021 - 24858064
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  24858021 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 24858064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25888036 - 25888079
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  25888036 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 25888079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31784396 - 31784439
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  31784396 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 31784439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 32013218 - 32013293
Alignment:
Q  13 ttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagg 88  Q
    |||||||| || || ||| | |||||||||||||||||| |||  |||||||||||| |||| || ||||||||||    
T  32013218 ttagggtgacacgtaagccttgaccgagtcaaaattgaccttgagggccaaaactgctacatttgcaaaacttagg 32013293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38731424 - 38731467
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||    
T  38731424 gtggcacctcacttaaggtgtcacgtcagcgttgaccgagtcaa 38731467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 39620693 - 39620736
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  39620693 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 39620736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40493814 - 40493771
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  40493814 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 40493771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40711482 - 40711525
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||| || ||||||||    
T  40711482 gtggcacctcacttagggtgtcacgtcagcgttgatcgagtcaa 40711525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45395384 - 45395427
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  45395384 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 45395427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 16043203 - 16043269
Alignment:
Q  36 ccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||||| | |||| ||||||||||||||||  || ||||| ||||||||| || |||||    
T  16043203 ccgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacatagggggcggttctgtag 16043269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 16238393 - 16238435
Alignment:
Q  26 tcagcgtagaccgagtcaaaattgacattggaggccaaaactg 68  Q
    |||||| ||||| |||||||||||||||||| |||||||||||    
T  16238393 tcagcgaagaccaagtcaaaattgacattgggggccaaaactg 16238435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 42274693 - 42274739
Alignment:
Q  25 gtcagcgtagaccgagtcaaaattgacattggaggccaaaactgcca 71  Q
    ||||||| ||||| ||||||||||| | |||||||||||||||||||    
T  42274693 gtcagcgaagaccaagtcaaaattggccttggaggccaaaactgcca 42274739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 25493 - 25452
Alignment:
Q  61 caaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||    
T  25493 caaaactgccacaggtgcaaaacttagggggcggttttgtag 25452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 14489410 - 14489459
Alignment:
Q  53 ttggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||| ||||||||||||||||  || ||||||||||||| ||||||||||    
T  14489410 ttgggggccaaaactgccacagttgcaaaacttagggggtgattttgtag 14489459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 14983417 - 14983364
Alignment:
Q  18 gtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgcca 71  Q
    |||||| |||||||| |||||||||||||||||  | || ||||||||||||||    
T  14983417 gtgtcacgtcagcgttgaccgagtcaaaattgatctagggggccaaaactgcca 14983364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 18969244 - 18969341
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||||| |||| |||||| |||||||||| || ||||||||||| | |||| || |||||| ||||||  |  |||| |||| || |||||||||||    
T  18969244 cacctcatttagagtgtcacgtcagcgtaggcctagtcaaaattggccttgggggtcaaaacagccacaaatacaaaatttagaggacgattttgtag 18969341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 23686663 - 23686716
Alignment:
Q  18 gtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgcca 71  Q
    |||||| |||||||| |||||||||||||||||  | || ||||||||||||||    
T  23686663 gtgtcacgtcagcgttgaccgagtcaaaattgatctagggggccaaaactgcca 23686716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 24205441 - 24205481
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagt 41  Q
    |||||||||||||||||||| || |||||||| ||||||||    
T  24205441 gtggcacctcacttagggtgccacgtcagcgttgaccgagt 24205481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 5e-29; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 15107138 - 15107304
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| ||  |||| ||||||||||||||||||| |||||||||||||||||||||||  || ||||||||||| ||| ||||||    
T  15107138 gtggcacctcacttagggtgccacatcagtgtagaccgagtcaaaattggcattggaggccaaaactgccacaaatgcaaaacttagggagcggttttgt 15107237  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    ||         ||||||| |||||||||| ||||||| ||| |||  ||| ||||||| |||||||||||    
T  15107238 agtttttt---ttagggggccaaaatcgtaactttggaaaaattaggggggtaaaactgctattaagcct 15107304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 167
Target Start/End: Complemental strand, 47909848 - 47909696
Alignment:
Q  14 tagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtagnnnnnnnnctt 113  Q
    |||||| ||||||||||||||||||||||||||||||| ||| | ||||||| |||||||  || ||||||||||||||||||||||||        |||    
T  47909848 tagggtatcatgtcagcgtagaccgagtcaaaattgaccttgaaagccaaaattgccacagatgcaaaacttagggggcgattttgtag-tttttttctt 47909750  T
Q  114 aggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaag 167  Q
    ||||| | |||||||  |||||||||||||||  ||||||||||| ||||||||    
T  47909749 agggggctaaaatcgcaactttgggaaagttagggggctaaaactgctattaag 47909696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 5 - 173
Target Start/End: Original strand, 36580425 - 36580592
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtagnn 104  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||| |||| ||||||||||||||||  || ||||||||||||||| ||||||||      
T  36580425 cacctcatttagggtgccacgtcagcgtagaccgagtcaaaattgactttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtag-c 36580523  T
Q  105 nnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagccttta 173  Q
          |||   ||| ||||||||  ||||||  |||||||||||| ||||||||||||||| ||||||    
T  36580524 ttttttcttgaaggatcaaaatcgcaactttgaaaaagttaaagggttaaaactactattaaaccttta 36580592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 18504411 - 18504310
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||| ||||||||||||||| || |||||||||||| |||||||||||| | || ||||||||||||||||||| || ||||||||||||||| ||||||    
T  18504411 gtggaacctcacttagggtgccacgtcagcgtagactgagtcaaaattggccttagaggccaaaactgccacatatgcaaaacttagggggcggttttgt 18504312  T
Q  101 ag 102  Q
    ||    
T  18504311 ag 18504310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 26 - 179
Target Start/End: Complemental strand, 28350259 - 28350106
Alignment:
Q  26 tcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtagnnnnnnnncttaggggaccaaaa 125  Q
    |||||||||| |||||||||||||   |||| |||||||||||||||| | | ||||||||||||||| ||||||||        |||||||| ||||||    
T  28350259 tcagcgtagatcgagtcaaaattggtcttgggggccaaaactgccacaggggcaaaacttagggggcggttttgtagttttttttcttagggggccaaaa 28350160  T
Q  126 tcgtgactttgggaaagttaaagggctaaaactactattaagcctttaatttat 179  Q
    |||| |||| | ||||||||  ||||||||||| ||||||||||||||| ||||    
T  28350159 tcgtaacttcgtgaaagttagggggctaaaactgctattaagcctttaagttat 28350106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 6726401 - 6726501
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || ||||||||| || |||||||||||| | |||| ||| |||||||||||||||| ||||||||||||| ||||||||    
T  6726401 gtggcacctcacttagggtgccacgtcagcgtaaactgagtcaaaattgtccttgggggc-aaaactgccacatgtgcaaaacttagggggtgattttgt 6726499  T
Q  101 ag 102  Q
    ||    
T  6726500 ag 6726501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 36903430 - 36903341
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggg 90  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| | |||  ||||||||||||||||  || ||||||||||||    
T  36903430 gtggcacctcacttagggtgccatgtcagcgtagaccgagtcaaaattggccttgagggccaaaactgccacagatggaaaacttagggg 36903341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 35250286 - 35250118
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||| |||| || ||||| ||||||||||||||||||| | |||| | ||||||||| || |  || ||||||||| ||||| |||| |    
T  35250286 gtggcacctcacttaaggtgccacgtcagtgtagaccgagtcaaaattggccttggggtccaaaactgtcaaagatgcaaaacttagagggcggttttat 35250187  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    ||        |||| |||||||||||||  ||||||| ||||||| ||||||||||||||||||||||||    
T  35250186 agttttttt-cttaagggaccaaaatcgcaactttggaaaagttagagggctaaaactactattaagcct 35250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 15029220 - 15029128
Alignment:
Q  9 tcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||||| ||||||| |||||| | ||| |||||||||||||| |||| |||||||||||||||||||| ||||||||||||||| ||||||||    
T  15029220 tcacttaaggtgtcacgtcagcatggac-gagtcaaaattgaccttgggggccaaaactgccacatgtgcaaaacttagggggcggttttgtag 15029128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 29834297 - 29834462
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||||||||||| |||||||| ||||||||| |||||||| |||| ||  |||| || |||| ||| ||||||||||||||| ||||||    
T  29834297 gtggcacctcacttagggtgtcacgtcagcgtggaccgagtctaaattgaccttgggggagaaaattgtcacaggtgcaaaacttagggggcggttttgt 29834396  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaa 166  Q
    |          |||| ||||||||||    ||||||| |||||||  |||||||||||||||||||    
T  29834397 attttttttttttagaggaccaaaattacaactttggaaaagttagggggctaaaactactattaa 29834462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 28785901 - 28786002
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||  | |||| || ||||||||||| |  || |||||||| |||||  ||||||    
T  28785901 gtggcacctcacttagggtgtcacgtcagcgtagaccgagtcaaaattagccttgggggtcaaaactgccataaatgcaaaacttatggggcagttttgt 28786000  T
Q  101 ag 102  Q
    ||    
T  28786001 ag 28786002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 18186597 - 18186763
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || |||| ||||||| |||||||||||| | |||| | ||||||||||||||  || |||||||| ||| || |||| |    
T  18186597 gtggcacctcacttagggtgccacgtcaacgtagactgagtcaaaattggccttggggaccaaaactgccacagatgcaaaacttaagggacggttttat 18186696  T
Q  101 ag-nnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaa 166  Q
    ||         ||||||||  ||||||||| ||||||| |||||||  ||||||||||| |||||||    
T  18186697 agtttttttttcttagggggtcaaaatcgtaactttggaaaagttagggggctaaaactgctattaa 18186763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 3382013 - 3381929
Alignment:
Q  17 ggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||  |||||||| |||||||||||||| || |||| ||||||||||||||||| || ||||||||||||||| ||||||||    
T  3382013 ggtgtcacatcagcgtacaccgagtcaaaattaaccttgg-ggccaaaactgccacatatgcaaaacttagggggcggttttgtag 3381929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 8074042 - 8073957
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaactta 86  Q
    |||||||||||||||| ||| || ||||||| ||||||| ||||||||| | |||| ||||||||||||||||| || ||||||||    
T  8074042 gtggcacctcacttagagtgccacgtcagcgaagaccgaatcaaaattggccttgggggccaaaactgccacatatgcaaaactta 8073957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 14247455 - 14247552
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||| ||||||||| ||  |||||||||| ||||| ||||||| | ||||| ||||||||||||||||||| ||||||||| || || ||||||||    
T  14247455 cacctcccttagggtgccacatcagcgtagatcgagttaaaattggctttggatgccaaaactgccacatgtgcaaaacttagcggacggttttgtag 14247552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 15348118 - 15348029
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggg 90  Q
    |||| ||||||||||||||| ||  |||||||||||||||||||||||||| |||| ||||| |||| |||||  || ||||||||||||    
T  15348118 gtggaacctcacttagggtgccacatcagcgtagaccgagtcaaaattgaccttgggggccataacttccacagatgcaaaacttagggg 15348029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 20185060 - 20184984
Alignment:
Q  26 tcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||| || |||||||| | |||| ||||||||    
T  20185060 tcagcgtagaccgagtcaaaattgaccttgggggccaaaactggcacatatgcaaaacttaagaggcggttttgtag 20184984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 170
Target Start/End: Complemental strand, 41243806 - 41243643
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtagnn 104  Q
    |||||||||||||||| || |||| |||||||||||||||||||| | |||| | | ||||||||||||  || |||||||| |||||| ||||||||      
T  41243806 cacctcacttagggtgccacgtcaacgtagaccgagtcaaaattggccttggggacaaaaactgccacaaatgcaaaactta-ggggcggttttgtag-t 41243709  T
Q  105 nnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
          |||||||| | ||||| |  ||||||| |||||||  ||||||||||| |||||||||||    
T  41243708 ttttttcttagggggctaaaattgcaactttggaaaagttagggggctaaaactgctattaagcct 41243643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 17931878 - 17931976
Alignment:
Q  3 ggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    |||||||||||||||||| || ||||||||||||  |||||||||||| ||| | | ||||||||| ||||  || |||| |||| |||||||||||||    
T  17931878 ggcacctcacttagggtgccacgtcagcgtagacaaagtcaaaattgatatttgggaccaaaactgacacagatgcaaaatttagagggcgattttgta 17931976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 28472555 - 28472391
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||| | ||||||||| |||| |||||||||| |||||||||   |||| ||| |||||||||||||  | ||||||||  ||||||||||||    
T  28472555 gtggcacctcattcagggtgtcacgtcaacgtagaccgaatcaaaattggtcttgggggcgaaaactgccacataagcaaaacttatagggcgattttgt 28472456  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagc 168  Q
    ||        ||||||||  ||||||||  ||||||| |||||| | ||||||||||| |||||||||    
T  28472455 ag--ttttttcttagggggtcaaaatcgcaactttggaaaagtt-aggggctaaaactgctattaagc 28472391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 3318460 - 3318317
Alignment:
Q  25 gtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtagnnnnnnnncttaggggaccaaa 124  Q
    |||| ||||||||||||||||||||   ||||||| ||||| || |||| ||| |||||||| ||| || |||||||          |||||||||||||    
T  3318460 gtcaacgtagaccgagtcaaaattggttttggaggtcaaaaatgtcacaggtgcaaaacttaagggacggttttgtaattttttt--ttaggggaccaaa 3318363  T
Q  125 atcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    ||||  ||||||| |||||||| ||||||||||| |||||||||||    
T  3318362 atcgcaactttggaaaagttaaggggctaaaactcctattaagcct 3318317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 23826175 - 23826086
Alignment:
Q  13 ttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||| |||| ||||||||||||||| ||||||||||  |||| ||||||||||||||||  || |||| ||| || ||||||||||||    
T  23826175 ttagggcgtcacgtcagcgtagaccgaatcaaaattgatcttgggggccaaaactgccacaaatgcaaaatttaaggagcgattttgtag 23826086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4049877 - 4049805
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccaca 73  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||||| | |||  || |||||||||||||    
T  4049877 gtggcacctcacttagggtgccacgtcagcgtagatcgagtcaaaattggccttgagggtcaaaactgccaca 4049805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 44312889 - 44312937
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattg 49  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  44312889 gtggcacctcacttagggtgacatgtcagcatagaccgagtcaaaattg 44312937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 19644970 - 19644885
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaactta 86  Q
    ||||||||||||||| |||| || |||||||||||| | || |||||||   ||||||||||||||||| |||  |||||||||||    
T  19644970 gtggcacctcacttacggtgccacgtcagcgtagactgggttaaaattggtcttggaggccaaaactgctacagttgtaaaactta 19644885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 28350307 - 28350379
Alignment:
Q  17 ggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggg 90  Q
    ||||||| || ||||||||| |||||||||||| | |||| |||||||||||||||| ||| ||||||||||||    
T  28350307 ggtgtcacgttagcgtagacagagtcaaaattggccttgg-ggccaaaactgccacaggtgcaaaacttagggg 28350379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 5172678 - 5172582
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgatttt 98  Q
    |||||||||||||||||||  |||||| |||||||||||||| |||||   ||||  || ||||||||||||  || ||||||||| |||| |||||    
T  5172678 tggcacctcacttagggtgcaatgtcaacgtagaccgagtcataattggttttgggagctaaaactgccacagatgcaaaacttagagggcaatttt 5172582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 21505768 - 21505927
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtagnn 104  Q
    ||||||||||||||||||| |||| ||||||| ||||||||| || | ||||  ||||||||||||| || || ||| | ||||||||  ||||||||      
T  21505768 cacctcacttagggtgtcacgtcaacgtagactgagtcaaaa-tggccttgggagccaaaactgccatatatgcaaagcatagggggcagttttgtagtt 21505866  T
Q  105 nnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactatta 165  Q
          |||||||| |||||||||  ||||||  |||||||  || |||||||| ||||||    
T  21505867 ttttttcttagggggccaaaatcgcaactttgaaaaagttaggggactaaaactgctatta 21505927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 166
Target Start/End: Original strand, 6792020 - 6792107
Alignment:
Q  79 aaaacttagggggcgattttgtagnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaa 166  Q
    ||||||||||||||| ||||||||        ||||||||||||||||||  ||||||| |||||||  ||||||||||| |||||||    
T  6792020 aaaacttagggggcggttttgtagttttttttcttaggggaccaaaatcgcaactttggaaaagttagggggctaaaactgctattaa 6792107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 20505226 - 20505147
Alignment:
Q  13 ttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggc 92  Q
    |||||||| || ||||||||||||||||||||||||||| |||||| | ||||| | | ||  || ||||||||||||||    
T  20505226 ttagggtgccacgtcagcgtagaccgagtcaaaattgaccttggagtctaaaaccgtcgcagatgcaaaacttagggggc 20505147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 10350951 - 10351021
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgcca 71  Q
    |||||||||||||||||||| || |||||||| ||||||||||| | |||  |||| | ||||||||||||    
T  10350951 gtggcacctcacttagggtgccaagtcagcgttgaccgagtcaacaatgaacttggggtccaaaactgcca 10351021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 4049977 - 4050046
Alignment:
Q  111 cttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcctttaatttata 180  Q
    |||||||| ||||||||   |||| | ||||||||| |||| |||||| |||||||||||||||||||||    
T  4049977 cttagggggccaaaatcacaacttcgtgaaagttaaggggcgaaaactgctattaagcctttaatttata 4050046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 17876313 - 17876237
Alignment:
Q  25 gtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    |||||| |||| ||||||||||||| | |||||||||||||| ||||||  || |||| |||||||||  |||||||    
T  17876313 gtcagcatagatcgagtcaaaattggccttggaggccaaaaccgccacagatgcaaaatttagggggcagttttgta 17876237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 25036181 - 25036221
Alignment:
Q  4 gcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  25036181 gcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 25036221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 40872317 - 40872357
Alignment:
Q  6 acctcacttagggtgtcatgtcagcgtagaccgagtcaaaa 46  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  40872317 acctcacttagggtgccacgtcagcgtagaccgagtcaaaa 40872357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 497257 - 497300
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  497257 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 497300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 930876 - 930833
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  930876 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 930833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5096955 - 5096912
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  5096955 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 5096912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7195624 - 7195581
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  7195624 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 7195581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7974557 - 7974514
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  7974557 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 7974514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10319037 - 10319080
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  10319037 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 10319080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17757908 - 17757951
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  17757908 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 17757951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18073960 - 18074003
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  18073960 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 18074003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18296020 - 18295977
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  18296020 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 18295977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21917232 - 21917275
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  21917232 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 21917275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23740410 - 23740453
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  23740410 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 23740453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24236282 - 24236239
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  24236282 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 24236239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25987068 - 25987111
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  25987068 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 25987111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26612510 - 26612467
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  26612510 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 26612467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30757370 - 30757413
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  30757370 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 30757413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34288216 - 34288173
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  34288216 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 34288173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35121580 - 35121537
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  35121580 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 35121537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35437374 - 35437331
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  35437374 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 35437331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35711802 - 35711845
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  35711802 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 35711845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36376228 - 36376185
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  36376228 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 36376185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38053314 - 38053271
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  38053314 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 38053271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39754039 - 39753996
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  39754039 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 39753996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39976897 - 39976854
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  39976897 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 39976854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42997197 - 42997240
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  42997197 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 42997240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 47731870 - 47731827
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  47731870 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 47731827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 31530114 - 31530072
Alignment:
Q  29 gcgtagaccgagtcaaaattgacattggaggccaaaactgcca 71  Q
    |||| |||||||||||||||| |||||| ||||||||||||||    
T  31530114 gcgttgaccgagtcaaaattggcattgggggccaaaactgcca 31530072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 9500075 - 9500148
Alignment:
Q  29 gcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||| |||| ||||||||||| | |||| |||||||||| ||||| |   ||||||||||||||| ||||||||    
T  9500075 gcgttgaccaagtcaaaattggccttgggggccaaaactaccacaaggtcaaaacttagggggcggttttgtag 9500148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 98
Target Start/End: Complemental strand, 42256692 - 42256655
Alignment:
Q  61 caaaactgccacatgtgtaaaacttagggggcgatttt 98  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  42256692 caaaactgccacatgtgcaaaacttagggggcggtttt 42256655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 48059000 - 48058928
Alignment:
Q  29 gcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||| |||| ||||||||||||| | || ||||||||||||||||   | |||||||||||| |||||||||||    
T  48059000 gcgtcgaccaagtcaaaattgacctagg-ggccaaaactgccacagaggcaaaacttaggggacgattttgtag 48058928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 10312379 - 10312415
Alignment:
Q  8 ctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||| |||||||| |||||||||||    
T  10312379 ctcacttagggtgtcacgtcagcgttgaccgagtcaa 10312415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 26311550 - 26311651
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||||| |||| ||||||||||||||||| || |||||||| |||| | ||||||    
T  26311550 gtggcacctcacttaggatgccacgtcagcgtagaccgagtcaaaattgaccttgggggccaaaactgccacatatgcaaaacttaaggggtggttttgt 26311649  T
Q  101 ag 102  Q
    ||    
T  26311650 ag 26311651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 30349516 - 30349347
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||| || |||| |||||||||||||| ||||| | |||| || ||||||| |||||  || |||||||| |||||| ||||||    
T  30349516 gtggcacctcacttagggtgccacgtcaacgtagaccgagtcataattggccttgggggtcaaaactaccacagatgcaaaacttaaggggcggttttgt 30349417  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcctt 171  Q
    ||        ||||||||  ||||||||  ||||||||||||||| |||||||||||| ||||||||||||    
T  30349416 ag-tttttttcttaggggctcaaaatcgcaactttgggaaagttagagggctaaaactgctattaagcctt 30349347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 5003229 - 5003324
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||  |||||||||||||||  || |||||||||||||| |||||||    
T  5003229 cacctcacttagggtgtcacgtcagcgtagaccaagttaaaattgacattgggagccaaaactgccacaattgcaaaacttagggggcaattttgt 5003324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 10727340 - 10727509
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||| ||||||||||||  || ||||||||||| | ||||||||||| | |||| ||||||||||||||||  || ||||||||||||||| ||||||    
T  10727340 gtggcatctcacttagggtcccacgtcagcgtagatcaagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggttttgt 10727439  T
Q  101 agnnnnnnnncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    ||        |||||||| ||||||||   ||||||| |||||||  ||||||||||| |||||| ||||    
T  10727440 agttttttttcttagggggccaaaatcacaactttggaaaagttagggggctaaaactgctattatgcct 10727509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 33399944 - 33399785
Alignment:
Q  9 tcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtagnnnnnn 108  Q
    |||||||||||| || ||||||||||||||||||||||||||| || | ||||||||||||||||  ||||||||||||||  || ||||||||          
T  33399944 tcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttaggggccaaaactgccacaaatgtaaaacttagggtccggttttgtag-ttttt 33399846  T
Q  109 nncttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
      ||||| || |||||||||  ||||||| |||||| | ||||||||||| |||||||||||    
T  33399845 ttcttagagggccaaaatcgcaactttggaaaagtt-aggggctaaaactgctattaagcct 33399785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 11351803 - 11351719
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaactt 85  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| |||||| | | |||||||||| || ||||||||||    
T  11351803 gtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggcattggggacgaaaactgccatatatgtaaaactt 11351719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 6036806 - 6036895
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggg 90  Q
    ||||||||||||||||||||||| |||||| || ||| ||||||||||| | |||| || |||||||||||||| || ||||||||||||    
T  6036806 gtggcacctcacttagggtgtcacgtcagcataaaccaagtcaaaattggctttgggggtcaaaactgccacatatgcaaaacttagggg 6036895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 17532418 - 17532318
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||| || | || | |||||||||||||||| ||| |||||||| |||||| ||||||    
T  17532418 gtggcacctcactt-gggtgccatgtcatcgtagaccgagtcaaaactggctttaggggccaaaactgccacaggtgcaaaacttaaggggcggttttgt 17532320  T
Q  101 ag 102  Q
    ||    
T  17532319 ag 17532318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 266262 - 266357
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    ||||||||||||| ||||| ||||||||||||||| |||||||||   |||| |||||||||||||||| ||| |||||||| |||||| |||||||    
T  266262 cacctcacttaggatgtcacgtcagcgtagaccgaatcaaaattggttttgg-ggccaaaactgccacaggtgcaaaacttaaggggcggttttgta 266357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 2853585 - 2853662
Alignment:
Q  25 gtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||  |||||||||||| | |||| ||||||||||||||||| || ||||||||||||||| ||||||||    
T  2853585 gtcagcgtagaatgagtcaaaattggccttgggggccaaaactgccacatatgaaaaacttagggggcggttttgtag 2853662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 3812904 - 3812820
Alignment:
Q  4 gcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttaggg 89  Q
    ||||||||||||||||| || |||||||||||||| ||||||||||   |||| ||||||||||||||||| || |||||||||||    
T  3812904 gcacctcacttagggtgccacgtcagcgtagaccgggtcaaaattggtcttgg-ggccaaaactgccacatatgcaaaacttaggg 3812820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 20474851 - 20474951
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||| |||  || || |||| |||| |||||||||| ||||||||||| ||||||||||||||||  || ||||||||||||||| ||||||    
T  20474851 gtggcacctcacatagactgccacgtcaacgtataccgagtcaacattgacattgggggccaaaactgccacagatgcaaaacttagggggcg-ttttgt 20474949  T
Q  101 ag 102  Q
    ||    
T  20474950 ag 20474951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 32143422 - 32143326
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    |||||||||||| ||| ||  ||| ||||||||||||||||||||   |||| |||||||||||||||| ||| |||||||| |||||| |||||||    
T  32143422 cacctcacttagagtgccacatcaacgtagaccgagtcaaaattggtcttgggggccaaaactgccacaggtgcaaaacttaaggggcggttttgta 32143326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 239093 - 239194
Alignment:
Q  3 ggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaactta--gggggcgattttgt 100  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||| | ||||  ||||||||||| ||| |||  |||||||  |||| |||||||||    
T  239093 ggcacctcacttagggtgccacgtcagcgtagaccgaatcaaaattggccttgggtgccaaaactgcaacaggtgctaaacttatgggggacgattttgt 239192  T
Q  101 ag 102  Q
    ||    
T  239193 ag 239194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1377375 - 1377275
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||||||||  |  ||||| ||||||||||||||||   | |||  ||||||||| ||||||  || |||| |||||||||||||||||    
T  1377375 gtggcacctcacttagggtgcgacatcagcatagaccgagtcaaaataagccttgagggccaaaacagccacaaatgcaaaatttagggggcgattttgt 1377276  T
Q  101 a 101  Q
    |    
T  1377275 a 1377275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1385123 - 1385023
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||||||||  |  ||||| ||||||||||||||||   | |||  ||||||||| ||||||  || |||| |||||||||||||||||    
T  1385123 gtggcacctcacttagggtgcgacatcagcatagaccgagtcaaaataagccttgagggccaaaacagccacaaatgcaaaatttagggggcgattttgt 1385024  T
Q  101 a 101  Q
    |    
T  1385023 a 1385023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 18031092 - 18031154
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaact 67  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||  |||  ||||||||||    
T  18031092 cacctcacttagggtgccacgtcagcgtagaccaagtcaaaattgatcttgagggccaaaact 18031154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2203331 - 2203286
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaa 46  Q
    ||||||||| |||||||||| || ||||||||||||||||||||||    
T  2203331 gtggcacctgacttagggtgccacgtcagcgtagaccgagtcaaaa 2203286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2565224 - 2565267
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  2565224 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 2565267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3194581 - 3194624
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||    
T  3194581 gtggcacctcacttaaggtgtcacgtcagcgttgaccgagtcaa 3194624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5606464 - 5606421
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  5606464 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 5606421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6261549 - 6261506
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  6261549 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 6261506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7324823 - 7324780
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  7324823 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 7324780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7391622 - 7391665
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  7391622 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 7391665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11615066 - 11615023
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  11615066 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 11615023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12256932 - 12256889
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||    
T  12256932 gtggcacctcacttagggtgtcacgtcagcgttgactgagtcaa 12256889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 16765209 - 16765166
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  16765209 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 16765166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21008891 - 21008934
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  21008891 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 21008934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23291401 - 23291444
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  23291401 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 23291444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27223454 - 27223497
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  27223454 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 27223497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31951373 - 31951330
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  31951373 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 31951330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 15711782 - 15711824
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||| || |||||||| |||||||||||    
T  15711782 tggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 15711824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 27771363 - 27771429
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgcca 71  Q
    |||||||||||||||| || |||||||| ||||||||||||| ||   | |||| ||||||||||||    
T  27771363 cacctcacttagggtgccacgtcagcgttgaccgagtcaaaaatggactgggagtccaaaactgcca 27771429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 16735731 - 16735690
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaa 46  Q
    |||||||||||||||| || |||||||| |||||||||||||    
T  16735731 cacctcacttagggtgccacgtcagcgttgaccgagtcaaaa 16735690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 30965859 - 30965814
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaa 46  Q
    |||||||||||||||||||| || |||||| | |||||||||||||    
T  30965859 gtggcacctcacttagggtgccacgtcagcattgaccgagtcaaaa 30965814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 24119642 - 24119590
Alignment:
Q  19 tgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgcca 71  Q
    ||||||||||||| ||||  |||||||| || | |||||||||||||||||||    
T  24119642 tgtcatgtcagcgaagactaagtcaaaagtggccttggaggccaaaactgcca 24119590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 26601624 - 26601528
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    ||||||||| ||||||  |  ||||||||||||||||||||||||   |||| | ||||| ||| ||||  || ||||||||||||| | |||||||    
T  26601624 cacctcactaagggtgctacatcagcgtagaccgagtcaaaattggtcttggggaccaaagctgtcacagatgcaaaacttagggggtggttttgta 26601528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 19175 - 19276
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||| ||||||| |||||||  |||||||||||||||||| |||||||| | |||| |||||||||| ||||||||| ||||||||||||||| ||||||    
T  19175 gtggtacctcacgtagggtgctatgtcagcgtagaccgagccaaaattggccttgggggccaaaactaccacatgtgcaaaacttagggggcggttttgt 19274  T
Q  101 ag 102  Q
    ||    
T  19275 ag 19276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 9579 - 9478
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||| ||| | ||||| |||||| |||||||||||||||||| | |||| ||| ||||||||||||| || |||||||||||| || ||||||    
T  9579 gtggcacctcatttaagatgtcacgtcagcctagaccgagtcaaaattggccttgggggctaaaactgccacatatgcaaaacttaggggacggttttgt 9480  T
Q  101 ag 102  Q
    ||    
T  9479 ag 9478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 567 - 470
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    ||||||| |||||||| || |||||  ||||||||||||||||||   |||| ||||||||||||||||| |||||||||||||||| | ||||||||    
T  567 cacctcatttagggtgccacgtcagtatagaccgagtcaaaattggtcttgggggccaaaactgccacatatgtaaaacttagggggtggttttgtag 470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 20077 - 19980
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||||||| || || |||||||| ||||||||||||| | |||| ||||||||||||||||  || ||||||||| || |||||||||||    
T  20077 cacctcacttagggtgccacgttagcgtagatcgagtcaaaattggctttgggggccaaaactgccacagatgcaaaacttagtggacgattttgtag 19980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 77025 - 76929
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||||||| || ||||||||||||||||||||||||| | |||| || |||||||||||||  || |||||||||||||||  |||||||    
T  77025 cacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgg-gggcaaaactgccacaaatgcaaaacttagggggcggctttgtag 76929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 77064 - 77108
Alignment:
Q  58 ggccaaaactgccacatgtgtaaaacttagggggcgattttgtag 102  Q
    |||||||||||| |||  ||||||||||||||| |||||||||||    
T  77064 ggccaaaactgctacagttgtaaaacttaggggacgattttgtag 77108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 145521 - 145420
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||||| | |||| ||||||||||||||||  || |||| ||| ||||||  |||||    
T  145521 gtggcacctcacttagggttccatgtcagcctagaccgagtcaaaattggccttgggggccaaaactgccacagatgcaaaatttaaggggcggctttgt 145422  T
Q  101 ag 102  Q
    ||    
T  145421 ag 145420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 3243 - 3157
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttag 87  Q
    |||||| ||||||||||||| || ||||||||||||||||||||||||||| |||  |||||||| |||||||  || |||||||||    
T  3243 gtggcatctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgagggccaaaattgccacaaatgcaaaacttag 3157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 290 - 190
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgt 100  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||  | || | |||||||||||||||| ||| |||| ||||| | || ||||||    
T  290 gtggcacctcacttagggtgtcacgtcagtgtagaccgagtcaaaattcgcctt-gtggccaaaactgccacaagtgcaaaatttaggagacgtttttgt 192  T
Q  101 ag 102  Q
    ||    
T  191 ag 190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 46228 - 46321
Alignment:
Q  8 ctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    ||||||||||||| || |||||||||||| |||||||||||||| |||| ||||||||||| ||||  || ||||||||| ||||  |||||||    
T  46228 ctcacttagggtgccacgtcagcgtagactgagtcaaaattgaccttgggggccaaaactgtcacagatgcaaaacttagagggcagttttgta 46321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 9501 - 9429
Alignment:
Q  5 cacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtg 77  Q
    ||||||||||||| || || ||||||||||||||||||||||||||  |||| |||||||||| |||||||||    
T  9501 cacctcacttaggatgccacgtcagcgtagaccgagtcaaaattgatcttgggggccaaaactaccacatgtg 9429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 25047 - 25146
Alignment:
Q  2 tggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgta 101  Q
    ||||||||||||||| ||| || ||||||| ||| |||||||||||||   |||| |||||||||| || ||| || ||||||||||||||| |||||||    
T  25047 tggcacctcacttagagtgccacgtcagcgaagatcgagtcaaaattggttttgg-ggccaaaactaccgcatatgcaaaacttagggggcggttttgta 25145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 170
Target Start/End: Complemental strand, 3697 - 3638
Alignment:
Q  111 cttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    |||||||| |||||||||  |||||||||||||||  ||||||||||| |||||||||||    
T  3697 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcct 3638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 170
Target Start/End: Complemental strand, 3697 - 3638
Alignment:
Q  111 cttaggggaccaaaatcgtgactttgggaaagttaaagggctaaaactactattaagcct 170  Q
    |||||||| |||||||||  |||||||||||||||  ||||||||||| |||||||||||    
T  3697 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcct 3638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 29796 - 29839
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  29796 gtggcacctcacttagggtgccatgtcagcgttgaccgagtcaa 29839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 79158 - 79115
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  79158 gtggcacctcacttagggtgtcacgtcagcgttgaccgagtcaa 79115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2907 - 2991
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaactta 86  Q
    |||||| |||| ||||||||||| ||||  |||||| |||||||||||| | |||| ||||||||||| ||||| || ||||||||    
T  2907 gtggcatctcatttagggtgtcacgtcaaagtagactgagtcaaaattggctttgg-ggccaaaactgtcacatatgcaaaactta 2991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 93965 - 93925
Alignment:
Q  6 acctcacttagggtgtcatgtcagcgtagaccgagtcaaaa 46  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  93965 acctcacttagggtgccacgtcagcgtagaccgagtcaaaa 93925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0864 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0864
Description:

Target: scaffold0864; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2812 - 2769
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  2812 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 2769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10082 - 10125
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  10082 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 10125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 9676 - 9558
Alignment:
Q  43 aaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgattttgtagnnnnnnnncttaggggaccaaaatcgtgactttgggaaag 142  Q
    ||||||||  |||| |||||||||| | |||  || |||||||| |||||||||||||||         ||||||| ||||||||   ||||||| ||||    
T  9676 aaaattgatcttgggggccaaaactactacagttgcaaaacttaaggggcgattttgtagtttt-----ttagggggccaaaatcacaactttggaaaag 9582  T
Q  143 ttaaagggctaaaactactattaa 166  Q
    |||| |||||||||||||||||||    
T  9581 ttaaggggctaaaactactattaa 9558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 9707 - 9779
Alignment:
Q  25 gtcagcgtagaccgagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggggcgatttt 98  Q
    ||||||||||| |||||||||||||   |||| |||||||||||||||   || |||| |||||||||||||||    
T  9707 gtcagcgtagaacgagtcaaaattggtcttgg-ggccaaaactgccaccgatgcaaaatttagggggcgatttt 9779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20771 - 20814
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  20771 gtggcacctcacttagggtgccacgtcagcgtggaccgagtcaa 20814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 81448 - 81491
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  81448 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 81491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 139320 - 139363
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  139320 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 139363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 400873 - 400830
Alignment:
Q  1 gtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaa 44  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  400873 gtggcacctcacttagggtgccacgtcagcgttgaccgagtcaa 400830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 21817 - 21776
Alignment:
Q  8 ctcacttagggtgtcatgtcagcgtagaccgagtcaaaattg 49  Q
    ||||||| ||||| || |||||||||||||||||||||||||    
T  21817 ctcacttggggtgccacgtcagcgtagaccgagtcaaaattg 21776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 203359 - 203411
Alignment:
Q  38 gagtcaaaattgacattggaggccaaaactgccacatgtgtaaaacttagggg 90  Q
    |||||||||||||| |||| ||||||||||| ||||  || ||||||||||||    
T  203359 gagtcaaaattgactttgggggccaaaactgtcacaaatgcaaaacttagggg 203411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 596 times since January 2019
Visitors: 6696