View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0914_low_35 (Length: 379)

Name: NF0914_low_35
Description: NF0914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0914_low_35
NF0914_low_35
[»] chr1 (39 HSPs)
chr1 (56-367)||(43235658-43235968)
chr1 (53-328)||(5533223-5533496)
chr1 (81-233)||(38547057-38547209)
chr1 (61-259)||(39134721-39134916)
chr1 (138-259)||(45758491-45758608)
chr1 (61-233)||(26803869-26804037)
chr1 (138-233)||(38853520-38853614)
chr1 (153-233)||(27559649-27559729)
chr1 (143-232)||(6221680-6221769)
chr1 (153-233)||(5316692-5316772)
chr1 (153-233)||(23185439-23185519)
chr1 (153-233)||(44655753-44655833)
chr1 (151-233)||(6771801-6771883)
chr1 (151-233)||(40501811-40501893)
chr1 (153-233)||(9173044-9173124)
chr1 (153-233)||(9181026-9181106)
chr1 (153-233)||(14146312-14146392)
chr1 (153-233)||(17168968-17169048)
chr1 (155-233)||(16140069-16140147)
chr1 (151-233)||(50881440-50881522)
chr1 (153-233)||(1366899-1366979)
chr1 (153-233)||(3406430-3406510)
chr1 (153-233)||(3440310-3440390)
chr1 (153-233)||(4971639-4971719)
chr1 (153-233)||(5027561-5027641)
chr1 (153-233)||(19955729-19955809)
chr1 (143-340)||(10925871-10926065)
chr1 (143-233)||(33170761-33170851)
chr1 (153-233)||(41697158-41697238)
chr1 (154-233)||(51607460-51607540)
chr1 (176-233)||(21740958-21741015)
chr1 (152-232)||(50146307-50146387)
chr1 (153-195)||(44895664-44895706)
chr1 (176-233)||(6889646-6889703)
chr1 (176-233)||(6891492-6891549)
chr1 (83-125)||(1366983-1367025)
chr1 (83-125)||(9173128-9173170)
chr1 (83-125)||(13913587-13913629)
chr1 (174-232)||(35392303-35392361)
[»] chr8 (35 HSPs)
chr8 (49-233)||(7944544-7944728)
chr8 (29-330)||(11290061-11290364)
chr8 (29-259)||(5973107-5973331)
chr8 (29-229)||(34789888-34790088)
chr8 (61-259)||(15167415-15167607)
chr8 (73-330)||(41677100-41677355)
chr8 (61-232)||(15078669-15078838)
chr8 (138-233)||(5942682-5942777)
chr8 (146-233)||(8102906-8102993)
chr8 (143-259)||(39332405-39332517)
chr8 (138-251)||(5721545-5721654)
chr8 (153-233)||(42600783-42600863)
chr8 (153-233)||(45475818-45475898)
chr8 (61-231)||(34048729-34048901)
chr8 (153-233)||(10917392-10917472)
chr8 (153-233)||(23606651-23606731)
chr8 (153-233)||(23798283-23798363)
chr8 (153-233)||(30883330-30883410)
chr8 (140-233)||(14510005-14510097)
chr8 (138-233)||(23941113-23941208)
chr8 (153-233)||(2952243-2952323)
chr8 (153-233)||(5860766-5860846)
chr8 (153-233)||(13534709-13534788)
chr8 (153-233)||(13624249-13624328)
chr8 (147-259)||(8646201-8646308)
chr8 (143-226)||(25561523-25561605)
chr8 (153-259)||(41879182-41879284)
chr8 (153-233)||(3048539-3048619)
chr8 (61-125)||(25561636-25561700)
chr8 (153-233)||(37430180-37430260)
chr8 (174-231)||(30674427-30674484)
chr8 (82-130)||(8102844-8102892)
chr8 (73-125)||(8646121-8646173)
chr8 (83-125)||(10917346-10917388)
chr8 (268-297)||(8103027-8103056)
[»] scaffold0022 (2 HSPs)
scaffold0022 (29-259)||(39960-40190)
scaffold0022 (29-259)||(138020-138250)
[»] chr7 (42 HSPs)
chr7 (29-218)||(17800257-17800446)
chr7 (76-330)||(23858997-23859248)
chr7 (73-259)||(7398372-7398554)
chr7 (73-259)||(27237422-27237604)
chr7 (106-233)||(9021821-9021947)
chr7 (153-233)||(48983865-48983945)
chr7 (147-259)||(2611261-2611369)
chr7 (143-259)||(6765680-6765792)
chr7 (153-233)||(20091302-20091382)
chr7 (153-233)||(23551092-23551172)
chr7 (153-233)||(29077221-29077301)
chr7 (143-259)||(12981317-12981429)
chr7 (73-233)||(23020505-23020663)
chr7 (145-259)||(36891571-36891681)
chr7 (156-233)||(36902945-36903022)
chr7 (153-233)||(8171560-8171640)
chr7 (153-233)||(38414897-38414977)
chr7 (73-330)||(12419422-12419678)
chr7 (154-232)||(38971255-38971333)
chr7 (153-233)||(10329431-10329511)
chr7 (153-233)||(10955485-10955565)
chr7 (153-233)||(12596308-12596388)
chr7 (153-233)||(18776787-18776867)
chr7 (153-233)||(19692095-19692175)
chr7 (153-233)||(24525706-24525786)
chr7 (153-233)||(47984991-47985071)
chr7 (143-233)||(18201128-18201218)
chr7 (143-233)||(20153192-20153282)
chr7 (138-233)||(9014790-9014878)
chr7 (176-233)||(26254017-26254074)
chr7 (176-233)||(33162360-33162417)
chr7 (153-233)||(8239688-8239768)
chr7 (61-125)||(26917811-26917875)
chr7 (199-325)||(9014111-9014233)
chr7 (164-233)||(23744808-23744877)
chr7 (29-81)||(38971203-38971256)
chr7 (157-233)||(28749715-28749790)
chr7 (174-233)||(21763608-21763667)
chr7 (83-125)||(20091386-20091428)
chr7 (153-195)||(25010434-25010476)
chr7 (83-125)||(48983949-48983991)
chr7 (268-317)||(38971365-38971414)
[»] chr3 (37 HSPs)
chr3 (29-259)||(8420206-8420432)
chr3 (29-233)||(49392971-49393173)
chr3 (61-330)||(26279452-26279719)
chr3 (53-233)||(789841-790020)
chr3 (50-259)||(54574827-54575032)
chr3 (61-259)||(52374570-52374762)
chr3 (153-233)||(8073360-8073440)
chr3 (153-233)||(21582775-21582855)
chr3 (138-259)||(25855411-25855527)
chr3 (147-305)||(32319110-32319263)
chr3 (153-233)||(54619225-54619305)
chr3 (63-227)||(28689389-28689552)
chr3 (68-233)||(42453331-42453488)
chr3 (153-259)||(3953896-3953998)
chr3 (153-233)||(9878709-9878789)
chr3 (153-233)||(34290658-34290738)
chr3 (153-233)||(44708481-44708561)
chr3 (153-233)||(47467688-47467768)
chr3 (154-233)||(37168372-37168451)
chr3 (73-222)||(29598032-29598179)
chr3 (153-233)||(42098805-42098885)
chr3 (153-233)||(50939255-50939335)
chr3 (153-233)||(53506906-53506986)
chr3 (155-233)||(38681115-38681193)
chr3 (153-233)||(27078591-27078671)
chr3 (153-233)||(27084388-27084468)
chr3 (177-233)||(36716047-36716103)
chr3 (153-233)||(43207260-43207339)
chr3 (153-233)||(53149336-53149416)
chr3 (161-233)||(54407180-54407252)
chr3 (155-233)||(18372485-18372567)
chr3 (153-233)||(50258645-50258726)
chr3 (157-233)||(36605973-36606048)
chr3 (50-125)||(36179630-36179705)
chr3 (198-233)||(23641340-23641375)
chr3 (153-220)||(29620423-29620490)
chr3 (83-125)||(44708435-44708477)
[»] chr4 (56 HSPs)
chr4 (73-328)||(52468212-52468463)
chr4 (61-330)||(36118386-36118650)
chr4 (152-233)||(35779346-35779427)
chr4 (63-233)||(39329413-39329583)
chr4 (87-233)||(27111970-27112116)
chr4 (143-233)||(4167912-4168002)
chr4 (73-233)||(40217156-40217318)
chr4 (153-233)||(54780783-54780863)
chr4 (142-233)||(37744931-37745022)
chr4 (147-233)||(2135342-2135428)
chr4 (147-233)||(24396934-24397020)
chr4 (153-233)||(10978906-10978986)
chr4 (153-233)||(16845027-16845107)
chr4 (30-130)||(30507196-30507296)
chr4 (153-233)||(32915391-32915471)
chr4 (153-233)||(34027585-34027665)
chr4 (153-233)||(34768595-34768675)
chr4 (73-230)||(36178599-36178755)
chr4 (153-233)||(37777244-37777324)
chr4 (153-233)||(38209612-38209692)
chr4 (153-233)||(43455552-43455632)
chr4 (77-233)||(15735026-15735176)
chr4 (73-233)||(36362892-36363051)
chr4 (151-233)||(5128863-5128945)
chr4 (153-259)||(2790740-2790842)
chr4 (153-259)||(47128993-47129095)
chr4 (161-233)||(32128598-32128670)
chr4 (153-232)||(40089522-40089601)
chr4 (73-233)||(45656102-45656261)
chr4 (32-125)||(22077070-22077163)
chr4 (153-233)||(13460213-13460293)
chr4 (61-125)||(37746850-37746914)
chr4 (153-233)||(54083263-54083343)
chr4 (159-233)||(37514671-37514745)
chr4 (169-259)||(39655253-39655339)
chr4 (143-233)||(51691936-51692028)
chr4 (153-233)||(1105538-1105618)
chr4 (153-233)||(48209246-48209326)
chr4 (143-259)||(10041999-10042111)
chr4 (178-233)||(10428218-10428273)
chr4 (268-335)||(30507041-30507108)
chr4 (179-233)||(17679432-17679486)
chr4 (176-252)||(51964737-51964812)
chr4 (268-330)||(11906829-11906891)
chr4 (155-233)||(35465115-35465192)
chr4 (176-233)||(16922350-16922407)
chr4 (153-233)||(19498510-19498588)
chr4 (201-233)||(23508532-23508564)
chr4 (272-327)||(4167852-4167907)
chr4 (83-125)||(16844981-16845023)
chr4 (153-195)||(24969443-24969485)
chr4 (83-125)||(38352360-38352402)
chr4 (76-125)||(2135447-2135496)
chr4 (176-232)||(16882417-16882473)
chr4 (85-125)||(29425302-29425342)
chr4 (83-123)||(37777330-37777370)
[»] chr2 (37 HSPs)
chr2 (61-222)||(37182578-37182739)
chr2 (141-335)||(16096996-16097187)
chr2 (61-258)||(38400706-38400899)
chr2 (73-230)||(12134065-12134222)
chr2 (73-233)||(16227390-16227550)
chr2 (61-330)||(24035473-24035739)
chr2 (61-328)||(13800474-13800738)
chr2 (73-330)||(21665629-21665882)
chr2 (153-233)||(29939884-29939964)
chr2 (149-231)||(28425734-28425816)
chr2 (153-259)||(9046029-9046132)
chr2 (153-233)||(12337470-12337550)
chr2 (153-233)||(24410437-24410517)
chr2 (73-259)||(10252327-10252518)
chr2 (73-227)||(11912785-11912940)
chr2 (144-233)||(7742156-7742245)
chr2 (153-233)||(3155217-3155297)
chr2 (153-233)||(3953006-3953086)
chr2 (153-233)||(4505894-4505974)
chr2 (153-233)||(6965007-6965087)
chr2 (153-233)||(10762587-10762667)
chr2 (153-233)||(26716128-26716208)
chr2 (61-217)||(11952644-11952800)
chr2 (154-233)||(27506762-27506841)
chr2 (179-233)||(40636164-40636218)
chr2 (138-227)||(22727530-22727619)
chr2 (61-167)||(29694292-29694398)
chr2 (153-233)||(7162784-7162864)
chr2 (153-233)||(8907101-8907181)
chr2 (174-259)||(42029166-42029247)
chr2 (161-232)||(480151-480222)
chr2 (179-233)||(5952737-5952791)
chr2 (176-233)||(34693998-34694055)
chr2 (176-233)||(34716410-34716467)
chr2 (32-98)||(16096680-16096746)
chr2 (272-330)||(22727385-22727443)
chr2 (83-125)||(27506846-27506888)
[»] chr6 (25 HSPs)
chr6 (73-335)||(20611714-20611971)
chr6 (87-233)||(2477606-2477752)
chr6 (143-233)||(21183697-21183787)
chr6 (153-233)||(13727421-13727501)
chr6 (153-233)||(17353958-17354038)
chr6 (153-233)||(20711742-20711822)
chr6 (153-233)||(21479498-21479578)
chr6 (153-233)||(27788710-27788790)
chr6 (153-233)||(33774121-33774201)
chr6 (143-233)||(6159432-6159522)
chr6 (151-233)||(34397859-34397941)
chr6 (153-233)||(24711021-24711101)
chr6 (153-233)||(28075787-28075867)
chr6 (154-233)||(21280550-21280629)
chr6 (143-232)||(4036942-4037031)
chr6 (157-233)||(1155871-1155947)
chr6 (153-233)||(19737714-19737794)
chr6 (54-182)||(27131254-27131382)
chr6 (153-233)||(30832546-30832626)
chr6 (174-233)||(30121787-30121846)
chr6 (176-233)||(27314201-27314258)
chr6 (153-233)||(235246-235328)
chr6 (67-122)||(30121692-30121747)
chr6 (83-125)||(19987119-19987161)
chr6 (155-195)||(27994775-27994815)
[»] chr5 (41 HSPs)
chr5 (68-233)||(34425819-34425984)
chr5 (139-233)||(33037767-33037861)
chr5 (29-259)||(10407335-10407564)
chr5 (138-259)||(36868873-36868990)
chr5 (143-305)||(2530848-2531006)
chr5 (61-340)||(11242234-11242509)
chr5 (143-259)||(14318382-14318494)
chr5 (73-259)||(2412010-2412191)
chr5 (143-233)||(41911636-41911726)
chr5 (73-259)||(2024639-2024819)
chr5 (73-233)||(40794346-40794504)
chr5 (153-233)||(9364292-9364372)
chr5 (76-259)||(15639570-15639749)
chr5 (153-233)||(16198813-16198893)
chr5 (153-233)||(16799346-16799426)
chr5 (153-233)||(30854330-30854410)
chr5 (153-233)||(34756385-34756465)
chr5 (153-233)||(38869382-38869462)
chr5 (153-233)||(2274891-2274971)
chr5 (153-233)||(15480108-15480188)
chr5 (153-233)||(19523200-19523280)
chr5 (143-335)||(22648658-22648845)
chr5 (153-233)||(27079012-27079092)
chr5 (153-233)||(28822361-28822441)
chr5 (151-233)||(36187898-36187980)
chr5 (176-233)||(7338023-7338080)
chr5 (138-259)||(1366523-1366640)
chr5 (54-130)||(7079534-7079610)
chr5 (153-233)||(16592093-16592173)
chr5 (153-233)||(22986577-22986657)
chr5 (153-221)||(23284093-23284161)
chr5 (156-232)||(26718969-26719045)
chr5 (156-232)||(26988713-26988789)
chr5 (153-233)||(40389555-40389635)
chr5 (138-233)||(10543660-10543754)
chr5 (154-233)||(27924084-27924163)
chr5 (143-233)||(24395730-24395820)
chr5 (157-233)||(7670929-7671005)
chr5 (157-233)||(31194631-31194706)
chr5 (138-222)||(17344942-17345026)
chr5 (157-233)||(31881453-31881528)
[»] scaffold1320 (1 HSPs)
scaffold1320 (61-232)||(1265-1434)
[»] scaffold1590 (1 HSPs)
scaffold1590 (138-259)||(258-375)
[»] scaffold0182 (1 HSPs)
scaffold0182 (138-233)||(24015-24110)
[»] scaffold0018 (1 HSPs)
scaffold0018 (61-233)||(173532-173704)
[»] scaffold0012 (1 HSPs)
scaffold0012 (147-259)||(206489-206597)
[»] scaffold0007 (1 HSPs)
scaffold0007 (78-259)||(230859-231036)
[»] scaffold0097 (2 HSPs)
scaffold0097 (143-233)||(38916-39006)
scaffold0097 (272-339)||(39045-39112)
[»] scaffold0003 (1 HSPs)
scaffold0003 (50-229)||(351360-351532)
[»] scaffold0039 (1 HSPs)
scaffold0039 (153-259)||(106539-106641)
[»] scaffold0227 (1 HSPs)
scaffold0227 (50-220)||(15926-16095)
[»] scaffold0070 (1 HSPs)
scaffold0070 (153-233)||(1344-1424)


Alignment Details
Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 56 - 367
Target Start/End: Complemental strand, 43235968 - 43235658
Alignment:
Q  56 tccactttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggt 155  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||| | || ||||||||||||||||||||       ||||||||||||||||||    
T  43235968 tccactttccttttctattgttttgtattaggcctattagaattgagtcctattgcttttggtgttaggttgatgtttttttgggatggtggtttgaggt 43235869  T
Q  156 tcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacattttt 255  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||| ||| |||||||||||||||||    
T  43235868 tcctcatgtatacgatagtgattttcacctttgggtgtacatcatatatacgacatcttgtatttatcttt--aaaaaaaaatttaaatagaacattttt 43235771  T
Q  256 cttt-nnnnnnnntacatttttattttattataggcctctttttacttacaaagtcgagtctccgaattcgtaggatcgactctgcaacaagatatgatc 354  Q
    ||||         |||||||||||||||||| ||||||||||| |||||||||||||||| | || |||||||||| |||||||||||||||||||||||    
T  43235770 ctttagaaaaaaatacatttttattttattacaggcctcttttcacttacaaagtcgagtattcggattcgtaggaacgactctgcaacaagatatgatc 43235671  T
Q  355 tccacttaccctt 367  Q
    |||||||||||||    
T  43235670 tccacttaccctt 43235658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 53 - 328
Target Start/End: Original strand, 5533223 - 5533496
Alignment:
Q  53 gtttccactttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnn-gggatggtggtttg 151  Q
    |||| ||||||| |||||  ||||||||| ||| ||||||||||||||  || |||| |||||| |||||||| |  |        ||||||||||||||    
T  5533223 gttttcactttctttttccgttgtcttgttttacgcctattagaattggatcctcttgcttttgatgttaggtgggagttttttttgggatggtggtttg 5533322  T
Q  152 aggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacat 251  Q
    || ||||||||||||||| || |||||||||||||||  ||||||||||||||||| |||||||| ||||||||||||||   ||| |||||||||| ||    
T  5533323 agtttcctcatgtatacggtagtgattttcacctttgattgtacatcatatatacggcaccttgtgtttatcttttaaaa---aaatttaaatagaatat 5533419  T
Q  252 ttttctttnnnnnnnntacatttttattttattataggcctctttttacttacaaagtcgagtctccgaattcgtag 328  Q
    | ||||||        ||||||||||||||||||  || ||||||| ||||||| |||| || ||||| ||||||||    
T  5533420 tgttcttttaaaaaaatacatttttattttattacgggtctcttttcacttacagagtcaagcctccggattcgtag 5533496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 81 - 233
Target Start/End: Complemental strand, 38547209 - 38547057
Alignment:
Q  81 tattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgataatgatttt 180  Q
    |||||||||||||||||||  ||| |||||||||| ||||||||| | ||       |||| ||||||||||||||||||||||||| |||| |||||||    
T  38547209 tattaggcctattagaatttggtcctcttacttttagtgttaggtgggtgtttttttgggagggtggtttgaggttcctcatgtatatgatagtgatttt 38547110  T
Q  181 cacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||| |||||||||||  |||||||||| |||||||||||||||||||||||||    
T  38547109 cacatttgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaa 38547057  T

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Target: chr1; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 61 - 259
Target Start/End: Complemental strand, 39134916 - 39134721
Alignment:
Q  61 tttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctc 160  Q
    |||||| |||| ||||||||| ||| |||||||||||||| ||| |||| ||||||||||||||| | ||       |||| ||||||||||||||||||    
T  39134916 tttcctcttctgttgtcttgttttaagcctattagaattgggtcctcttgcttttggtgttaggtgggtgtttttttgggagggtggtttgaggttcctc 39134817  T
Q  161 atgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttcttt 259  Q
    ||||||||  || ||||| |||||||||||||||   |||||||||  ||||||||||||||||||| |||   ||| |||||||||||||| ||||||    
T  39134816 atgtatacagtagtgattatcacctttgggtgtattgcatatatacagcaccttgtatttatctttttaaa---aaatttaaatagaacattgttcttt 39134721  T

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Target: chr1; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 45758491 - 45758608
Alignment:
Q  138 gggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaa 237  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||| |||| | ||||||||| |||||||| |||||||||||||||||        
T  45758491 gggatggtggtttgaggttcctcatgtatacggtagtgattttcacctttggatgtataacatatatacaacaccttgcatttatcttttaaaaaat--- 45758587  T
Q  238 attaaatagaacatttttcttt 259  Q
     |||||||||||||| ||||||    
T  45758588 -ttaaatagaacattgttcttt 45758608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 61 - 233
Target Start/End: Original strand, 26803869 - 26804037
Alignment:
Q  61 tttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctc 160  Q
    |||||| |||| ||||||||| |||| ||||||||||||| || ||||| ||||||||||||||| ||         |||| |||||||||||||| |||    
T  26803869 tttcctcttctgttgtcttgttttagtcctattagaattgagttatcttgcttttggtgttaggt-gagtgttttttgggagggtggtttgaggtttctc 26803967  T
Q  161 atgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||| || |||||||||||||   |||||   ||||||||||||| ||||||||||||||||||||||    
T  26803968 atgtatacggtagtgattttcacctt---gtgtatcgcatatatacgacatcttgtatttatcttttaaaaaa 26804037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 138 - 233
Target Start/End: Original strand, 38853520 - 38853614
Alignment:
Q  138 gggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||| ||||||||||||| ||||||||||| || |||||||||||||||| | |||| |||||||||||||||||||||||||| |||||||||    
T  38853520 gggatgatggtttgaggttc-tcatgtatacggtagtgattttcacctttggatatacaacatatatacgacaccttgtatttatcatttaaaaaa 38853614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 27559649 - 27559729
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  27559649 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaa 27559729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 6221680 - 6221769
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaa 232  Q
    |||||||||||||||||||| |||||||||||||||||||| ||| | |||||  | |||||||| ||| ||||||||||||||||||||    
T  6221680 ggtggtttgaggttcctcatatatacgataatgattttcacattttgatgtaccgcttatatacggcacattgtatttatcttttaaaaa 6221769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 5316692 - 5316772
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  5316692 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 5316772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 23185439 - 23185519
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  23185439 ggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 23185519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 44655753 - 44655833
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||| |||| |||||||||  ||||||||||||||||||||||||||||||||||||    
T  44655753 ggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaa 44655833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 6771801 - 6771883
Alignment:
Q  151 gaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||| |||||||| || | |||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  6771801 gaggttcctcgtgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 6771883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 40501893 - 40501811
Alignment:
Q  151 gaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||| ||||||||||| || | ||||| ||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  40501893 gaggttcttcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaa 40501811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 9173124 - 9173044
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||||||| |||||  |||||||||| |||||| ||||||||||||||||||    
T  9173124 ggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaa 9173044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 9181106 - 9181026
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||||||| |||||  |||||||||| |||||| ||||||||||||||||||    
T  9181106 ggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaa 9181026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 14146312 - 14146392
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||| || |||||||||  |||||||||| |||||||||||||||||||||||||    
T  14146312 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 14146392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 17168968 - 17169048
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||| | || | ||||||||||||||||||||  ||||||||| ||||||| ||||||||||||||||||    
T  17168968 ggttcctcatgtatatggtagtcattttcacctttgggtgtaccgcatatatacaacaccttatatttatcttttaaaaaa 17169048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 16140069 - 16140147
Alignment:
Q  155 ttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||| || | |||||||||| | |||||||  ||||||||| ||||||||||||||||||||||||||    
T  16140069 ttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacaacaccttgtatttatcttttaaaaaa 16140147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 50881440 - 50881522
Alignment:
Q  151 gaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||||  || | |||||||||| | | |||||  ||||||||||||||||||||||||||||||||||||    
T  50881440 gaggttcctcatgtatactgtagtcattttcacctctagatgtaccgcatatatacgacaccttgtatttatcttttaaaaaa 50881522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 1366979 - 1366899
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||| |||||||| || | ||||||| ||||||||||||  |||||||||| |||||| ||||||||||||||||||    
T  1366979 ggttcctcgtgtatacggtagtcattttcatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaa 1366899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 3406430 - 3406510
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||||||  | ||||||  |||||||||| |||||||||||||||||||||||||    
T  3406430 ggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaa 3406510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 3440390 - 3440310
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||||||  | ||||||  |||||||||| |||||||||||||||||||||||||    
T  3440390 ggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaa 3440310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 4971719 - 4971639
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||| | |||||||||  ||||||||||  ||||||||||||||||||||||||    
T  4971719 ggttcctcatgtatacggtagtcattttcacttatgggtgtaccgcatatatacggtaccttgtatttatcttttaaaaaa 4971639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 5027561 - 5027641
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||| |||| | || | |||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  5027561 ggttcctcatctatatggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 5027641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 19955729 - 19955809
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||| |||||| || | ||||||||||||||||||||  ||||||||||  ||||| ||||||||||||||||||    
T  19955729 ggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaa 19955809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 143 - 340
Target Start/End: Complemental strand, 10926065 - 10925871
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaa 242  Q
    |||| ||||||| |||||||||||||| || ||||||||| |||||| || |  ||||||||||| ||| |||||||||| ||||||||   | | ||||    
T  10926065 ggtgatttgaggatcctcatgtatacggtagtgattttcatctttggatgcatctcatatatacggcacattgtatttattttttaaaa---atacttaa 10925969  T
Q  243 atagaacatttttctttnnnnnnnntacatttttattttattataggcctctttttacttacaaagtcgagtctccgaattcgtaggatcgactctgc 340  Q
    |||||| ||| ||||||        ||  ||||||||||||||  ||| |||||| ||||| | ||||||| |||| |||| |||||| || ||||||    
T  10925968 atagaatattgttcttttaaaaaaataagtttttattttattacgggcttcttttcacttagagagtcgagcctccaaatttgtaggaacggctctgc 10925871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 33170761 - 33170851
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||| ||||| |||||||||||| || ||||||||||| || |||||||  ||||||||| |||| |||||||||  ||||||||||    
T  33170761 ggtggtttaaggtttctcatgtatacggtagtgattttcaccatttggtgtaccgcatatatacaacacattgtatttacgttttaaaaaa 33170851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 41697238 - 41697158
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||| | ||| |||||  ||||||||||| || |||||||||||||||||||||    
T  41697238 ggttcctcatgtatacggtagtcattttcacttctggatgtactgcatatatacgatactttgtatttatcttttaaaaaa 41697158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 51607540 - 51607460
Alignment:
Q  154 gttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatac-gacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||||| || | |||||||| |||||||||||  ||||||||| | |||||| ||||||||||||||||||    
T  51607540 gttcctcatgtatacggtagtcattttcacgtttgggtgtaccgcatatatacggccaccttatatttatcttttaaaaaa 51607460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 21741015 - 21740958
Alignment:
Q  176 attttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||| ||||||||   |||||||||| |||||||||||||||||||||||||    
T  21741015 attttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaa 21740958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 50146307 - 50146387
Alignment:
Q  152 aggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaa 232  Q
    |||||||||||||||| | |||||||||| |||||||||| ||   |||||| ||| ||||||| |||||||||| |||||    
T  50146307 aggttcctcatgtatagggtaatgatttttacctttgggtctatcacatatacacggcaccttgcatttatctttcaaaaa 50146387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 44895664 - 44895706
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtac 195  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  44895664 ggttcctcatgtatacggtaatcattttcacctttgggtgtac 44895706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 6889646 - 6889703
Alignment:
Q  176 attttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||| ||| |||||  ||||||||||| || |||||||||||||||||||||    
T  6889646 attttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaa 6889703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 6891492 - 6891549
Alignment:
Q  176 attttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||| ||| |||||  ||||||||||| || |||||||||||||||||||||    
T  6891492 attttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaa 6891549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 1367025 - 1366983
Alignment:
Q  83 ttaggcctattagaattgtgtcatcttacttttggtgttaggt 125  Q
    |||||||||||||||||  |||||||| |||||||||||||||    
T  1367025 ttaggcctattagaattaggtcatcttgcttttggtgttaggt 1366983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 9173170 - 9173128
Alignment:
Q  83 ttaggcctattagaattgtgtcatcttacttttggtgttaggt 125  Q
    |||||||||||||||||  ||| ||||||||||||||||||||    
T  9173170 ttaggcctattagaattaggtcctcttacttttggtgttaggt 9173128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 13913629 - 13913587
Alignment:
Q  83 ttaggcctattagaattgtgtcatcttacttttggtgttaggt 125  Q
    |||||||||||||||||  |||||||| |||||||||||||||    
T  13913629 ttaggcctattagaattaggtcatcttgcttttggtgttaggt 13913587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 35392303 - 35392361
Alignment:
Q  174 tgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaa 232  Q
    |||||||||||||||| | |||  |||||||||| ||||||||||||||| || |||||    
T  35392303 tgattttcacctttggatataccgcatatatacggcaccttgtatttatccttaaaaaa 35392361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 3e-61; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 49 - 233
Target Start/End: Complemental strand, 7944728 - 7944544
Alignment:
Q  49 ccaggtttccactttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggt 148  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||| ||||||||||||||| | ||       |||||||||||    
T  7944728 ccaggtttccactttccttttctattgtcttgttttaggcctattaaaattgtgtcctcttgcttttggtgttaggtgggtgtttttttgggatggtggt 7944629  T
Q  149 ttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||    
T  7944628 ttgaggttcctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacggcaccttgtatttattttttaaaaaa 7944544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 29 - 330
Target Start/End: Original strand, 11290061 - 11290364
Alignment:
Q  29 aagtactaccccactattcaccaggtttccactttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttga 128  Q
    |||||||| ||||||  || ||| ||||||||||||||||||| ||||||||| |||||||||||||||||| ||| | || |||||||| |||||| ||    
T  11290061 aagtactatcccacttctccccacgtttccactttccttttctgttgtcttgttttaggcctattagaattgggtcctgttgcttttggtattaggtgga 11290160  T
Q  129 tgnnnnnnngggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatctttta 228  Q
    ||       ||||||||||||||||||| |||||||||||| || ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  11290161 tgttttgttgggatggtggtttgaggttgctcatgtatacggtagtgattttcacctttgagtgtacaacatatatacgacaccttgtatttatctttta 11290260  T
Q  229 aaaaacaaaattaaatagaacatttttcttt------nnnnnnnntacatttttattttattataggcctctttttacttacaaagtcgagtctccgaat 322  Q
    ||    ||| ||||||| |||||| ||||||               ||||||||||||||||| | | ||||||| ||||||||||||||||||| ||||    
T  11290261 aa----aaatttaaataaaacattgttcttttaaaaaaaaaaaaaaacatttttattttattacatgtctcttttcacttacaaagtcgagtctctgaat 11290356  T
Q  323 tcgtagga 330  Q
    ||||||||    
T  11290357 tcgtagga 11290364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 29 - 259
Target Start/End: Complemental strand, 5973331 - 5973107
Alignment:
Q  29 aagtactaccccactattcaccaggtttccactttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttga 128  Q
    |||||||||||||||||||  |||||||||||||| ||||||| ||||||||| ||||| ||||||||||||  ||||||| |||||||||||||||  |    
T  5973331 aagtactaccccactattcctcaggtttccacttttcttttctgttgtcttgttttaggtctattagaattggatcatcttgcttttggtgttaggtcaa 5973232  T
Q  129 tgnnnnnnngggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatctttta 228  Q
    ||          |||||||||||||||||||| |||||||| |||||||||||| || |||||||||| |||||||||||||||||||||||||||||||    
T  5973231 tgtttttttt--atggtggtttgaggttcctcgtgtatacggtaatgattttcatctatgggtgtacaacatatatacgacaccttgtatttatctttta 5973134  T
Q  229 aaaaacaaaattaaatagaacatttttcttt 259  Q
    |||||     |||||||||||||| ||||||    
T  5973133 aaaaat----ttaaatagaacattgttcttt 5973107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 29 - 229
Target Start/End: Complemental strand, 34790088 - 34789888
Alignment:
Q  29 aagtactaccccactattcaccaggtttccactttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttga 128  Q
    ||||||| |||||||| ||   |||||| |||||||||||| | ||||||  | |||||| ||||||||||| |||||||||||||||||||||||| |     
T  34790088 aagtactgccccactactccttaggttttcactttccttttatgttgtctaattttaggcatattagaattgggtcatcttacttttggtgttaggtggg 34789989  T
Q  129 tgnnnnnnngggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatctttta 228  Q
    ||        ||||||||||||||  || |||||||||||| || ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  34789988 tgtttttttaggatggtggtttgatatttctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacgacatcttgtatttatctttta 34789889  T
Q  229 a 229  Q
    |    
T  34789888 a 34789888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 61 - 259
Target Start/End: Complemental strand, 15167607 - 15167415
Alignment:
Q  61 tttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctc 160  Q
    |||||| |||| ||||||||| |||||||||||||||||| ||| |||||||||||||||||||| |  |       || | ||||||||||||||||||    
T  15167607 tttcctcttctgttgtcttgttttaggcctattagaattgggtcctcttacttttggtgttaggtgg--gtttttttggaagggtggtttgaggttcctc 15167510  T
Q  161 atgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttcttt 259  Q
    |||||||||||| |||||||||| ||||||||||   ||||||||| |||| || ||||||||||||||||||     |||||||||||||| ||||||    
T  15167509 atgtatacgatagtgattttcacatttgggtgtatcgcatatatacaacactttatatttatcttttaaaaaat----ttaaatagaacattgttcttt 15167415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 73 - 330
Target Start/End: Complemental strand, 41677355 - 41677100
Alignment:
Q  73 ttgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgata 172  Q
    ||||||||| |||||||||||||||| | ||| |||| ||||||||||||||| | ||       || | ||||||||||||||||||||||||||  ||    
T  41677355 ttgtcttgttttaggcctattagaatcgggtcctcttgcttttggtgttaggtgggtgtttttttgg-agggtggtttgaggttcctcatgtatacagta 41677257  T
Q  173 atgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttcttt--nnnnnnnntac 270  Q
     |||||||||||||| | ||||   ||||||||||||| ||||||||||||||||||||   ||| |||||||||||||| ||||||          |||    
T  41677256 gtgattttcacctttagatgtatcgcatatatacgacatcttgtatttatcttttaaaa---aaatttaaatagaacattgttcttttaaaaaaaaatac 41677160  T
Q  271 atttttattttattataggcctctttttacttacaaagtcgagtctccgaattcgtagga 330  Q
     |||||||||||||||||| ||||||| ||| ||| || |||| ||||||||||||||||    
T  41677159 gtttttattttattataggtctcttttcactcacagagccgagcctccgaattcgtagga 41677100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 61 - 232
Target Start/End: Original strand, 15078669 - 15078838
Alignment:
Q  61 tttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctc 160  Q
    |||||| |||| ||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||  ||        || |  |||||||||||||||||    
T  15078669 tttcctcttctgttgtcttgttttaggcctgttagaattgggtcctcttacttttggtgttaggtgaat--ttttttggaagcgtggtttgaggttcctc 15078766  T
Q  161 atgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaa 232  Q
    |||||||||||| |||||||||| |||||||||| | |||||||||  |||||| |||||||||||||||||    
T  15078767 atgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaa 15078838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 138 - 233
Target Start/End: Original strand, 5942682 - 5942777
Alignment:
Q  138 gggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||  || |||||||||| ||||||||||||||||||||||    
T  5942682 gggagggtggtttgaggttcctcatgtatacggtagtgattttcacctttgggtgtaccgcacatatacgacatcttgtatttatcttttaaaaaa 5942777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 8102906 - 8102993
Alignment:
Q  146 ggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||  |||||||||  |||||||||||||||||||||||||    
T  8102906 ggtttgaggttcctcatgtatacggtaatgattttcacctttaggtgtaccgcatatatactgcaccttgtatttatcttttaaaaaa 8102993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 143 - 259
Target Start/End: Complemental strand, 39332517 - 39332405
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaa 242  Q
    ||||||||||||||||||||||||||| || |||||||||||||||| |||||  | |||||| ||||||||||||||||||||| ||    ||||||||    
T  39332517 ggtggtttgaggttcctcatgtatacggtagtgattttcacctttggatgtaccgcttatatatgacaccttgtatttatctttttaa----aaaattaa 39332422  T
Q  243 atagaacatttttcttt 259  Q
    |||||||||| ||||||    
T  39332421 atagaacattgttcttt 39332405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 5721545 - 5721654
Alignment:
Q  138 gggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaa 237  Q
    |||| ||||||||||||||||||| ||||||| || |||||||||| |||||||||||    |||||| | ||||||||||||||||||||||    |||    
T  5721545 gggagggtggtttgaggttcctcaggtatacggtagtgattttcacttttgggtgtaccgattatatagggcaccttgtatttatcttttaaa----aaa 5721640  T
Q  238 attaaatagaacat 251  Q
    ||||||||||||||    
T  5721641 attaaatagaacat 5721654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 42600783 - 42600863
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||||||||||||||||  |||||||||| |||||| ||||||||||||||||||    
T  42600783 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaa 42600863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 45475818 - 45475898
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  45475818 ggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 45475898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 231
Target Start/End: Complemental strand, 34048901 - 34048729
Alignment:
Q  61 tttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctc 160  Q
    |||||| |||| |||||||||  ||||||||||||||| | | ||| ||||||||||||||||||   ||        ||| |||||| ||||| |||||    
T  34048901 tttcctcttctgttgtcttgtgctaggcctattagaatcgagccattttacttttggtgttaggtgagtgttttttttggagggtggtatgaggatcctc 34048802  T
Q  161 atgtatacgataatgattttcacctttgggtgta-catc-atatatacgacaccttgtatttatcttttaaaa 231  Q
    ||||||||  || ||||||||| ||||||||||| |||  ||||||||||||| |||||||||||||||||||    
T  34048801 atgtatacagtagtgattttcatctttgggtgtatcatatatatatacgacacattgtatttatcttttaaaa 34048729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 10917392 - 10917472
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||| | || | ||||||||||||||||||||  |||||||||| |||||| ||||||||||||||||||    
T  10917392 ggttcctcatgtataaggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaa 10917472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 23606731 - 23606651
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||| ||||||||||||||  |||||||||| |||||| ||||||||||||||||||    
T  23606731 ggttcctcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaa 23606651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 23798363 - 23798283
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||| |||||||||||  |||||||||| |||||| ||||||||||||||||||    
T  23798363 ggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaa 23798283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 30883330 - 30883410
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| |||||||||  |||||||||| ||| |||||||||||||||||||||    
T  30883330 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaa 30883410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 233
Target Start/End: Complemental strand, 14510097 - 14510005
Alignment:
Q  140 gatggtggtttgaggttcctcatgtatacgataatga-ttttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| |||||||||||| || ||| ||||||| |||||||||||  | ||||||||||||||| ||||| ||||||||||||    
T  14510097 gatggtggtttgaggttactcatgtatacggtagtgatttttcacatttgggtgtac--cgtatatacgacaccttatatttgtcttttaaaaaa 14510005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 23941208 - 23941113
Alignment:
Q  138 gggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||| |||||||||||||||||| | |||| |||  ||||||||| |||||||||||   | |||||| |||||||||||||||||||||||||||    
T  23941208 gggagggtggtttgaggttcctcgtatatatgattgtgattttcatctttgggtgtatcgcttatatatgacaccttgtatttatcttttaaaaaa 23941113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 2952323 - 2952243
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||| || |||||||||  |||||||||| ||| |||||||||||||||||||||    
T  2952323 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaa 2952243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 5860846 - 5860766
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||| |||||||||| | || | |||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  5860846 ggtttctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 5860766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 13534788 - 13534709
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| |||||||||  |||||||||| || ||||||||||||||||||||||    
T  13534788 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatcttttaaaaaa 13534709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 13624328 - 13624249
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| |||||||||  |||||||||| || ||||||||||||||||||||||    
T  13624328 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatcttttaaaaaa 13624249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 8646201 - 8646308
Alignment:
Q  147 gtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatag 246  Q
    |||||||||| || ||||||||| || |||||||||| |||| |||||   ||||||||||| ||||||||||||||||||||||||     ||||||||    
T  8646201 gtttgaggtttcttatgtatacggtagtgattttcacatttgcgtgtatg-catatatacgataccttgtatttatcttttaaaaaat----ttaaatag 8646295  T
Q  247 aacatttttcttt 259  Q
    |||||| ||||||    
T  8646296 aacattgttcttt 8646308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 25561605 - 25561523
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttt 226  Q
    |||||||||||||||||||||||||||  | |||||||||| ||||||| ||   |||||||||| ||||||||||||||||||    
T  25561605 ggtggtttgaggttcctcatgtatacggcagtgattttcacatttgggt-tatcgcatatatacggcaccttgtatttatcttt 25561523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 153 - 259
Target Start/End: Original strand, 41879182 - 41879284
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatt 252  Q
    |||| ||||||||| || || | |||||||||||||| |||||  ||||||||||  |||||||||||||||||||||||| |    |||||||||||||    
T  41879182 ggtttctcatgtattcggtagtcattttcacctttggatgtaccgcatatatacggtaccttgtatttatcttttaaaaaata----taaatagaacatt 41879277  T
Q  253 tttcttt 259  Q
     ||||||    
T  41879278 gttcttt 41879284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 3048619 - 3048539
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||| |||||||| || | ||||||| || | |||||||  |||||||||| |||||||||||||||||||||||||    
T  3048619 ggttcctcgtgtatacggtagtcattttcatctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 3048539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 25561700 - 25561636
Alignment:
Q  61 tttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggt 125  Q
    |||||| |||| ||||||||| |||||||||||||||||| ||| |||| |||||||||||||||    
T  25561700 tttcctattctgttgtcttgttttaggcctattagaattgggtcctcttgcttttggtgttaggt 25561636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 37430260 - 37430180
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||| |||| | ||||||   |||||||||| |||||||||||||||||||||||||    
T  37430260 ggttcctcatgtatacggtagtcatttttacctctaggtgtaacgcatatatacggcaccttgtatttatcttttaaaaaa 37430180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 30674484 - 30674427
Alignment:
Q  174 tgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaa 231  Q
    ||||||||||||||| |||||   ||||||||||||||||| ||||||||||||||||    
T  30674484 tgattttcacctttgagtgtatcgcatatatacgacaccttatatttatcttttaaaa 30674427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 8102844 - 8102892
Alignment:
Q  82 attaggcctattagaattgtgtcatcttacttttggtgttaggttgatg 130  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||| ||||    
T  8102844 attaggcctattagaattgggtcctcttgcttttggtgttaggtggatg 8102892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 8646121 - 8646173
Alignment:
Q  73 ttgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggt 125  Q
    ||||||||| ||||||||||| |||||  |||||||| |||||||||||||||    
T  8646121 ttgtcttgttttaggcctattcgaattaggtcatcttgcttttggtgttaggt 8646173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 125
Target Start/End: Original strand, 10917346 - 10917388
Alignment:
Q  83 ttaggcctattagaattgtgtcatcttacttttggtgttaggt 125  Q
    |||||||||||||||||  |||||||| |||||||||||||||    
T  10917346 ttaggcctattagaattaggtcatcttgcttttggtgttaggt 10917388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 297
Target Start/End: Original strand, 8103027 - 8103056
Alignment:
Q  268 tacatttttattttattataggcctctttt 297  Q
    ||||||||||||||||||||||||||||||    
T  8103027 tacatttttattttattataggcctctttt 8103056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 114; Significance: 1e-57; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 29 - 259
Target Start/End: Original strand, 39960 - 40190
Alignment:
Q  29 aagtactaccccactattcaccaggtttccactttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttga 128  Q
    ||||||||| ||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||| ||| |||| ||||| ||||||||| ||    
T  39960 aagtactactccactattccccaggtttccactttctttttctgttgtcttgttttaggcctattagaattgggtcctcttgctttttgtgttaggtgga 40059  T
Q  129 tgnnnnnnn--gggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttt 226  Q
    ||         |||| |||||||||||||| ||||||||||||||  ||||||||||||| ||||||||| |||| ||||| ||||||||||||||||||    
T  40060 tgtttttttttgggacggtggtttgaggttgctcatgtatacgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttt 40159  T
Q  227 taaaaaacaaaattaaatagaacatttttcttt 259  Q
    ||||||  |||||||||||||||||| ||||||    
T  40160 taaaaa--aaaattaaatagaacattgttcttt 40190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 29 - 259
Target Start/End: Original strand, 138020 - 138250
Alignment:
Q  29 aagtactaccccactattcaccaggtttccactttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttga 128  Q
    ||||||||| ||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||| ||| |||| ||||| ||||||||| ||    
T  138020 aagtactactccactattccccaggtttccactttctttttctgttgtcttgttttaggcctattagaattgggtcctcttgctttttgtgttaggtgga 138119  T
Q  129 tgnnnnnnn--gggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttt 226  Q
    ||         |||| |||||||||||||| ||||||||||||||  ||||||||||||| ||||||||| |||| ||||| ||||||||||||||||||    
T  138120 tgtttttttttgggacggtggtttgaggttgctcatgtatacgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttt 138219  T
Q  227 taaaaaacaaaattaaatagaacatttttcttt 259  Q
    ||||||  |||||||||||||||||| ||||||    
T  138220 taaaaa--aaaattaaatagaacattgttcttt 138250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 6e-50; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 29 - 218
Target Start/End: Complemental strand, 17800446 - 17800257
Alignment:
Q  29 aagtactaccccactattcaccaggtttccactttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttga 128  Q
    |||||||| ||||||| || ||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||| ||||||||||||||| ||    
T  17800446 aagtactatcccactactccccaggtttccactttccttttctgttgtcttgttttaggcctattagaattgggtcctcttgcttttggtgttaggtgga 17800347  T
Q  129 tgnnnnnnngggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtat 218  Q
    ||       |||||||||||||||  ||||||||| ||||| || |||||||||| |||||||||||| ||||||||||||| |||||||    
T  17800346 tgttttcttgggatggtggtttgaaattcctcatgcatacggtagtgattttcacttttgggtgtacaacatatatacgacaacttgtat 17800257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 76 - 330
Target Start/End: Original strand, 23858997 - 23859248
Alignment:
Q  76 tcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgataatg 175  Q
    |||||| |||||||||||||||||| ||| |||| | ||||||||||||| | ||       |||| |||||||||||| |||||||||||||| || |     
T  23858997 tcttgttttaggcctattagaattgggtcctcttgcatttggtgttaggtgggtgtttttttgggagggtggtttgaggatcctcatgtatacggtagta 23859096  T
Q  176 attttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttct-ttnnnnnnnntacattt 274  Q
    ||||||| |||||||||||   ||||||||||  || ||||||||||||||||||    ||| |||||||||||||| |||| ||        ||| |||    
T  23859097 attttcatctttgggtgtatcgcatatatacggtacattgtatttatcttttaaa----aaatttaaatagaacattattctcttaaacaaaatacgttt 23859192  T
Q  275 ttattttattataggcctctttttacttacaaagtcgagtctccgaattcgtagga 330  Q
    ||||||||||| ||| ||||||| ||||||| ||||||| |||| |||||||||||    
T  23859193 ttattttattacaggtctcttttcacttacagagtcgagcctccaaattcgtagga 23859248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 73 - 259
Target Start/End: Original strand, 7398372 - 7398554
Alignment:
Q  73 ttgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgata 172  Q
    ||||||||| |||||||||||||||||| ||| |||| |||||||||||| || ||||       |||| ||||||||||||||||||||||||| | ||    
T  7398372 ttgtcttgttttaggcctattagaattgggtcctcttgcttttggtgttacgtggatgtttttttgggagggtggtttgaggttcctcatgtatatggta 7398471  T
Q  173 atgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttcttt 259  Q
     |||||||||||||| ||||||   |||||||| | |||||||||||||||||| ||||||     |||||||||||||| ||||||    
T  7398472 gtgattttcacctttaggtgtatcacatatatatggcaccttgtatttatctttcaaaaaat----ttaaatagaacattgttcttt 7398554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 73 - 259
Target Start/End: Complemental strand, 27237604 - 27237422
Alignment:
Q  73 ttgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgata 172  Q
    ||||||||| |||||||||||||||||| |||||||| ||| |||||||||||   ||       |||| ||||||||||||||||||||||||||||||    
T  27237604 ttgtcttgttttaggcctattagaattgggtcatcttgcttatggtgttaggtgagtgtttttttgggagggtggtttgaggttcctcatgtatacgata 27237505  T
Q  173 atgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttcttt 259  Q
     |||||||||||||| | |  |   ||||||||| |||||||||||||||||||||||    ||| |||||||||||||| ||||||    
T  27237504 gtgattttcacctttagattcatcacatatatacaacaccttgtatttatcttttaaa----aaatttaaatagaacattgttcttt 27237422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 106 - 233
Target Start/End: Complemental strand, 9021947 - 9021821
Alignment:
Q  106 tcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatata 205  Q
    |||| ||||||||||||||| ||||       |||| ||||||||||||| ||||||||||||| || ||||||||||||||||||||||  ||||||||    
T  9021947 tcttgcttttggtgttaggtggatgtttttttgggagggtggtttgaggt-cctcatgtatacggtagtgattttcacctttgggtgtaccgcatatata 9021849  T
Q  206 cgacaccttgtatttatcttttaaaaaa 233  Q
    || ||| |||||||||||||||||||||    
T  9021848 cggcacattgtatttatcttttaaaaaa 9021821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 48983945 - 48983865
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  48983945 ggttcctcatgtatacggtagttattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaa 48983865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 2611369 - 2611261
Alignment:
Q  147 gtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatag 246  Q
    ||||||||||||||||||||||  |  ||||||||||| ||| ||||||  ||||||||||||||||||||||||||||||||||||     ||||||||    
T  2611369 gtttgaggttcctcatgtatacagttgtgattttcaccattgtgtgtaccgcatatatacgacaccttgtatttatcttttaaaaaat----ttaaatag 2611274  T
Q  247 aacatttttcttt 259  Q
    |||||| ||||||    
T  2611273 aacattgttcttt 2611261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 143 - 259
Target Start/End: Complemental strand, 6765792 - 6765680
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaa 242  Q
    |||||||||||||| ||| | |||||| || |||||||||||||||| |||||  | ||||||||||||||||||||||||||||||||||     ||||    
T  6765792 ggtggtttgaggttactcttatatacggtagtgattttcacctttggatgtacggcttatatacgacaccttgtatttatcttttaaaaaat----ttaa 6765697  T
Q  243 atagaacatttttcttt 259  Q
    |||||||||| ||||||    
T  6765696 atagaacattgttcttt 6765680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 20091382 - 20091302
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||||||||||||||||  |||||||||| |||||| ||||||||||||||||||    
T  20091382 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaa 20091302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 23551172 - 23551092
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||||||| |||||  ||||||||||||||||| ||||||||||||||||||    
T  23551172 ggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaa 23551092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 29077221 - 29077301
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| | |||||||  ||||||||||||||||||||||||||||||||||||    
T  29077221 ggttcctcatgtatacggtagtcattttcacctcttggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaa 29077301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 259
Target Start/End: Original strand, 12981317 - 12981429
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaa 242  Q
    |||||||||||||||||||| |||||  || ||||||||||||||| ||||||  | |||||| |  |||||||||||||||||||||    ||||||||    
T  12981317 ggtggtttgaggttcctcatatatacagtagtgattttcacctttgtgtgtaccgcgtatatatggaaccttgtatttatcttttaaa----aaaattaa 12981412  T
Q  243 atagaacatttttcttt 259  Q
    |||||||||| ||||||    
T  12981413 atagaacattcttcttt 12981429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 23020663 - 23020505
Alignment:
Q  73 ttgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgata 172  Q
    ||||||||| |||| ||||||||||||| ||||| |||||||||||||||||| | ||       | || | || ||||| |||||||||||||||| ||    
T  23020663 ttgtcttgttttagacctattagaattgggtcatattacttttggtgttaggtaggtg-ttttttgagaggatgatttgaagttcctcatgtatacggta 23020565  T
Q  173 atgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
     ||||||||||||||| ||||    ||||||||| ||||||| ||||||||||||||||||    
T  23020564 gtgattttcacctttgagtgt-gtgcatatatacaacaccttatatttatcttttaaaaaa 23020505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 36891571 - 36891681
Alignment:
Q  145 tggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaat 244  Q
    ||||||||||||||||||||||||| || |||||||||||||||| |||||   |||||||| |||| ||||||| ||| ||||||||| |    |||||    
T  36891571 tggtttgaggttcctcatgtatacggtagtgattttcacctttggatgtaccgaatatatacaacacattgtattcatcatttaaaaaata----taaat 36891666  T
Q  245 agaacatttttcttt 259  Q
    |||||||| ||||||    
T  36891667 agaacattattcttt 36891681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 36903022 - 36902945
Alignment:
Q  156 tcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||  || |||||||||||||| |||||||| ||||||||||||| ||||||||||||| ||||||||    
T  36903022 tcctcatgtatacagtactgattttcacctttaggtgtacaacatatatacgacatcttgtatttatctattaaaaaa 36902945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 8171640 - 8171560
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||| || |||||||||  |||||||||| |||||||||||||||||||||||||    
T  8171640 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 8171560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 38414977 - 38414897
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||  || | ||||||||||||||||||||  |||||||||| |||||| ||||||||||||||||||    
T  38414977 ggttcctcatgtatacagtagtcattttcacctttgggtgtaccacatatatacgtcaccttatatttatcttttaaaaaa 38414897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 330
Target Start/End: Complemental strand, 12419678 - 12419422
Alignment:
Q  73 ttgtcttgtattaggcctatta--gaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacga 170  Q
    ||||||||| ||||||||||||  |||||| ||| |||| |||||||||||||||   |        |||| |||||||||||||||||||||||| | |    
T  12419678 ttgtcttgttttaggcctattatagaattgggtcctcttgcttttggtgttaggtgtgtatttttttgggagggtggtttgaggttcctcatgtattcaa 12419579  T
Q  171 taatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttc-tttnnnnnnnnta 269  Q
    || ||||||||| |||||| ||||   || ||||| |  || |||||||||||||||||||||     |||||||||||||| ||| |||        ||    
T  12419578 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaat----ttaaatagaacattgttcttttaaaaaaaata 12419483  T
Q  270 catttttattttattataggcctctttttacttacaaagtcgagtctccgaattcgtagga 330  Q
    | || |||||||||||  |||||||||| |||||||||| |||| ||||| |||| |||||    
T  12419482 cgttgttattttattacgggcctcttttcacttacaaagccgagcctccggattcatagga 12419422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 38971255 - 38971333
Alignment:
Q  154 gttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaa 232  Q
    ||||||| ||| |||| || |||||||||| ||| |||||| | |||||||||||||||||||||||||||||||||||    
T  38971255 gttcctcgtgtttacggtagtgattttcacatttaggtgtataacatatatacgacaccttgtatttatcttttaaaaa 38971333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 10329511 - 10329431
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||| |||||||||||| || | |||||||||||||||| | | ||||||||||| |||||| ||||||||||||||||||    
T  10329511 ggtttctcatgtatacggtagtcattttcacctttgggttttcctcatatatacggcaccttatatttatcttttaaaaaa 10329431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 10955485 - 10955565
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| || ||||||  |||||||||| |||||| ||||||||||||||||||    
T  10955485 ggttcctcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttatatttatcttttaaaaaa 10955565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 12596388 - 12596308
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||| ||||| || | |||||||||| |||||||||  |||||||||| |||||||||||||||||| ||||||    
T  12596388 ggttcctcatgcatacggtagtcattttcacctctgggtgtaccacatatatacggcaccttgtatttatctttaaaaaaa 12596308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 18776867 - 18776787
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||| |||||||||||| || | |||||||| | |||||||||  |||||||||| |||||||||||||||||||||||||    
T  18776867 ggtttctcatgtatacggtagtcattttcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 18776787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 19692095 - 19692175
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||||||| | | |||||||||||| |||||||  |||||||| | |||||| ||||||||||||||||||    
T  19692095 ggttcctcatgtatacgaaagtcattttcacctttaggtgtaccgcatatatatggcaccttatatttatcttttaaaaaa 19692175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 24525786 - 24525706
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||| |||||||||||  |||||| ||| |||||| ||||||||||||||||||    
T  24525786 ggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatacacggcaccttatatttatcttttaaaaaa 24525706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 47985071 - 47984991
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| |  | ||||||||||||||||||||  |||||||||| |||||| ||||| ||||||||||||    
T  47985071 ggttcctcatgtatacggtggtcattttcacctttgggtgtaccgcatatatacggcaccttatatttttcttttaaaaaa 47984991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 18201128 - 18201218
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||||||||||| || | ||| |||||||||| || |||||||  |||||||| | || ||||||||||| ||||||||||    
T  18201128 ggtggtttgaggttcctcatgtgtaaggtaacgattttcacccttaggtgtaccacatatatatggcatcttgtatttatattttaaaaaa 18201218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 20153192 - 20153282
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||| | |||||||||||||  | ||||||||| |||||||| ||   ||||||||| |||| |||||||||||||||||||||    
T  20153192 ggtggtttgagatccctcatgtatacggcagtgattttcatctttgggtttatcgcatatatacaacactttgtatttatcttttaaaaaa 20153282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 9014878 - 9014790
Alignment:
Q  138 gggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||| |||| ||||||||| |||||||||||| || ||||||||||||||||||       ||||||||||||| |||||||||||||||| ||||    
T  9014878 gggagggtgatttgaggttactcatgtatacggtagtgattttcacctttgggt-------atatatacgacacattgtatttatcttttacaaaa 9014790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 26254017 - 26254074
Alignment:
Q  176 attttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||| ||||||||||||  |||||||||| |||||||||||||||||||||||||    
T  26254017 attttcatctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 26254074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 33162417 - 33162360
Alignment:
Q  176 attttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||| |||||||  |||||||||| |||||||||||||||||||||||||    
T  33162417 attttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 33162360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 8239688 - 8239768
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||| |||||| |||| |||||||| |||||||||||  |||||||||| ||| || ||||||| ||||||||||    
T  8239688 ggttcctcatatatacggtaatcattttcacatttgggtgtaccacatatatacggcacattatatttattttttaaaaaa 8239768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 26917875 - 26917811
Alignment:
Q  61 tttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggt 125  Q
    |||||| |||| ||||||||| |||||| ||||||||||| ||| |||| |||||||||||||||    
T  26917875 tttcctcttctgttgtcttgttttaggcttattagaattgggtcttcttgcttttggtgttaggt 26917811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 325
Target Start/End: Complemental strand, 9014233 - 9014111
Alignment:
Q  199 atatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttctttnnnnnnnntacatttttattttattataggcctcttttt 298  Q
    |||||||| |||| |||||||||||||||||||||     ||||||| |||||| ||||||        |||  |||||||||||||  ||||||||||     
T  9014233 atatatacaacacattgtatttatcttttaaaaaat----ttaaataaaacattgttctttaaaaaaaatacggttttattttattacgggcctcttttc 9014138  T
Q  299 acttacaaagtcgagtctccgaattcg 325  Q
    ||||| | ||||||| |||||||||||    
T  9014137 acttatagagtcgagcctccgaattcg 9014111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 23744808 - 23744877
Alignment:
Q  164 tatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||| || ||||||| | |||| |||||||  ||||||| || |||||||||||||||||||||||||    
T  23744808 tatacggtagtgatttttatctttaggtgtaccgcatatatgcggcaccttgtatttatcttttaaaaaa 23744877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 38971203 - 38971256
Alignment:
Q  29 aagtactaccccactattcaccaggtttccactttcc-ttttctattgtcttgt 81  Q
    |||||||||| ||||| || ||||||||||||||||| ||||||||||||||||    
T  38971203 aagtactacctcactactccccaggtttccactttcctttttctattgtcttgt 38971256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 28749715 - 28749790
Alignment:
Q  157 cctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||| || | |||||||| | || ||||||  |||||||||| ||||||||||||||||||| |||||    
T  28749715 cctcatgtatacggtagt-attttcacatctgagtgtaccgcatatatacggcaccttgtatttatcttttcaaaaa 28749790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 21763667 - 21763608
Alignment:
Q  174 tgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||| ||| ||||||   ||||||||||| || |||||||||||||||||||||    
T  21763667 tgattttcactttttggtgtatcgcatatatacgatactttgtatttatcttttaaaaaa 21763608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 20091428 - 20091386
Alignment:
Q  83 ttaggcctattagaattgtgtcatcttacttttggtgttaggt 125  Q
    |||||||||||||||||  ||| ||||||||||||||||||||    
T  20091428 ttaggcctattagaattaggtcctcttacttttggtgttaggt 20091386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 25010434 - 25010476
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtac 195  Q
    ||||||||||||||||| || | ||||||||||||||||||||    
T  25010434 ggttcctcatgtatacggtagtcattttcacctttgggtgtac 25010476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 48983991 - 48983949
Alignment:
Q  83 ttaggcctattagaattgtgtcatcttacttttggtgttaggt 125  Q
    |||||||||||||||||  ||| ||||||||||||||||||||    
T  48983991 ttaggcctattagaattaagtcctcttacttttggtgttaggt 48983949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 38971365 - 38971414
Alignment:
Q  268 tacatttttattttattataggcctctttttacttacaaagtcgagtctc 317  Q
    ||||||||||||||||||  || ||||||| |||||||||| ||||||||    
T  38971365 tacatttttattttattacgggtctcttttcacttacaaagccgagtctc 38971414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 6e-50; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 29 - 259
Target Start/End: Original strand, 8420206 - 8420432
Alignment:
Q  29 aagtactaccccactattcaccaggtttccactttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttga 128  Q
    |||||||||||||||| || ||||||||||||||||||||||| ||||||| | |||||| ||||||||||| ||  |||| ||||||||||||||| |     
T  8420206 aagtactaccccactactctccaggtttccactttccttttctgttgtcttattttaggcatattagaattgggttctcttgcttttggtgttaggtggg 8420305  T
Q  129 tgnnnnnnngggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatctttta 228  Q
    ||       || |||||||||||||||||||| | ||||||  | |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||    
T  8420306 tgtttttttggaatggtggtttgaggttcctcgtatatacggcagtgattttcacatttgggtgtacaacatatatacggcaccttgtatttatctttta 8420405  T
Q  229 aaaaacaaaattaaatagaacatttttcttt 259  Q
    |||||     |||||||||||||| ||||||    
T  8420406 aaaaat----ttaaatagaacattattcttt 8420432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 29 - 233
Target Start/End: Original strand, 49392971 - 49393173
Alignment:
Q  29 aagtactaccccactattcaccaggtttccactttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttga 128  Q
    ||||||| |||||||  || |||||||||||| |||||||||  ||||||||| |||||||||||||||||  ||| ||||||||||||||||||||       
T  49392971 aagtactgccccactcctccccaggtttccacattccttttccgttgtcttgttttaggcctattagaattaggtcctcttacttttggtgttaggtgag 49393070  T
Q  129 tgnnnnnnngggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatctttta 228  Q
    |        ||||||||| |||||||||| ||||||||||| || | ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  49393071 tatttttttgggatggtgatttgaggttc-tcatgtatacggtagtaatttttacctttgggtgtaca-catatatacgacgccttgtatttatctttta 49393168  T
Q  229 aaaaa 233  Q
    |||||    
T  49393169 aaaaa 49393173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 61 - 330
Target Start/End: Original strand, 26279452 - 26279719
Alignment:
Q  61 tttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctc 160  Q
    |||||| |||||||||||||| |||||||||||| ||||| ||||| || ||||||||||||||| | ||       |||| ||||||||||||||||||    
T  26279452 tttcctcttctattgtcttgttttaggcctattaaaattgggtcatgttgcttttggtgttaggtgggtgtttttttgggagggtggtttgaggttcctc 26279551  T
Q  161 atgtata--cgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttctt 258  Q
    |||||||     || ||||||||| |||||||||||   ||||||||||||||||| |||||||||||||||    ||| |||||||||||||| |||||    
T  26279552 atgtataatgtgtagtgattttcatctttgggtgtattgcatatatacgacaccttctatttatcttttaaa----aaatttaaatagaacattgttctt 26279647  T
Q  259 tnnnnnnnntacatttttattttattataggcctctttttacttacaaagtcgagtctccgaattcgtagga 330  Q
    |        ||| ||||||||||| ||| | |||||||| ||||||||||| ||  |||| ||||| |||||    
T  26279648 ttaaaaaaatacgtttttattttactatggacctcttttcacttacaaagttgaacctccaaattcatagga 26279719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 53 - 233
Target Start/End: Original strand, 789841 - 790020
Alignment:
Q  53 gtttccactttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttga 152  Q
    ||||||||||||||||||  ||||||||| |||||||| ||||||||| ||| |||||||||| ||||||| |   ||       ||| |||||||||||    
T  789841 gtttccactttccttttcggttgtcttgttttaggcct-ttagaattgggtcctcttactttttgtgttagatgagtgtttttttgggttggtggtttga 789939  T
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||| | |  ||||||| ||||||||||||||| |||||||| ||||||||||||||||  |||||||||    
T  789940 ggttcctcatgtatatggtggtgatttttacctttgggtgtacaacatatatatgacaccttgtatttattgtttaaaaaa 790020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 50 - 259
Target Start/End: Complemental strand, 54575032 - 54574827
Alignment:
Q  50 caggtttccactttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtt 149  Q
    |||||||| ||||||||||| | |||| |||| |||||| ||||||||||| ||||||||||||||| |||||||| | ||       |||| || ||||    
T  54575032 caggtttctactttccttttttgttgttttgttttaggcatattagaattgagtcatcttacttttgttgttaggtgggtgtttttttgggagggcggtt 54574933  T
Q  150 tgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaac 249  Q
    |||||||||||||||||| | || ||||||| || |||||||||||  ||||||||||  ||||||||||||| |||| |||||     |||||||||||    
T  54574932 tgaggttcctcatgtatatggtagtgatttttacttttgggtgtaccgcatatatacggtaccttgtatttatattttgaaaaat----ttaaatagaac 54574837  T
Q  250 atttttcttt 259  Q
    ||| ||||||    
T  54574836 attgttcttt 54574827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 61 - 259
Target Start/End: Original strand, 52374570 - 52374762
Alignment:
Q  61 tttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctc 160  Q
    ||||||||||| ||||||||| |||||||||||||||||| ||| |||| ||||||||||||||| | ||       |||| |||||| |||||||| ||    
T  52374570 tttccttttctgttgtcttgttttaggcctattagaattgagtcctcttgcttttggtgttaggtgggtg-ttttttggga-ggtggtatgaggttcttc 52374667  T
Q  161 atgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttcttt 259  Q
    ||||||||| || |||||||| ||||| | ||||   ||| |||||||||| |||||||||   ||||||||| ||| |||||||||||||| ||||||    
T  52374668 atgtatacggtagtgattttctcctttagatgtatcgcatctatacgacacattgtattta---tttaaaaaa-aaatttaaatagaacattgttcttt 52374762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 8073440 - 8073360
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||    
T  8073440 ggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaa 8073360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 21582775 - 21582855
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  21582775 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 21582855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 25855411 - 25855527
Alignment:
Q  138 gggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaa 237  Q
    |||| ||||||||||||||| || |||||||| || ||||||||| ||||||||| ||  |||||||||||||||||||||| |||||||||||||        
T  25855411 gggagggtggtttgaggttcttcgtgtatacggtagtgattttcaactttgggtgcactacatatatacgacaccttgtatt-atcttttaaaaaat--- 25855506  T
Q  238 attaaatagaacatttttcttt 259  Q
     |||||||||||||| ||||||    
T  25855507 -ttaaatagaacattgttcttt 25855527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 305
Target Start/End: Complemental strand, 32319263 - 32319110
Alignment:
Q  147 gtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatag 246  Q
    |||||||||||||| | |||| |||| | ||||||||||||||||||||  ||||||||| |||| |||||||||||||||||||||     ||||||||    
T  32319263 gtttgaggttcctcgtatataagatagtaattttcacctttgggtgtaccgcatatatacaacactttgtatttatcttttaaaaaat----ttaaatag 32319168  T
Q  247 aacatttttctttnnnnnnnntacatttttattttattataggcctctttttacttaca 305  Q
    |||||| ||||||        |||||||||||||||||| || ||| |||| |||||||    
T  32319167 aacattattcttt-aaaaacttacatttttattttattacagacctattttcacttaca 32319110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 54619305 - 54619225
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  54619305 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 54619225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 63 - 227
Target Start/End: Complemental strand, 28689552 - 28689389
Alignment:
Q  63 tccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcat 162  Q
    |||| |||| ||||||||| ||| ||||||||||||||  ||||||| ||||||||||||||| | ||       |||| ||| ||||||| || |||||    
T  28689552 tcctcttctgttgtcttgttttaagcctattagaattggatcatcttgcttttggtgttaggtgggtgtttttt-gggagggtagtttgagatttctcat 28689454  T
Q  163 gtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatctttt 227  Q
    |||||||  | |||||||||||||||| | ||   |||||||||| |||||||||||||||||||    
T  28689453 gtatacggcagtgattttcacctttggatatatcgcatatatacggcaccttgtatttatctttt 28689389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 68 - 233
Target Start/End: Original strand, 42453331 - 42453488
Alignment:
Q  68 ttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtata 167  Q
    |||| ||||||||| |||||||||||||||||| ||| |||||||||||||||||| | ||||          | |||||||||||||||||||||||||    
T  42453331 ttctgttgtcttgttttaggcctattagaattgagtcctcttacttttggtgttagatagatggtttttt-ttagggtggtttgaggttcctcatgtata 42453429  T
Q  168 cgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    || ||       |||||||| ||||||   |||||||| |||||||||||||||||||||||||||    
T  42453430 cgcta-------tcacctttaggtgtatcgcatatatatgacaccttgtatttatcttttaaaaaa 42453488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 259
Target Start/End: Complemental strand, 3953998 - 3953896
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatt 252  Q
    ||||||||||||||||| |  | |||||||||| |||||||||  |||||||||| ||||||||||||||||||||||||| |    |||||||||||||    
T  3953998 ggttcctcatgtatacggttttcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaata----taaatagaacatt 3953903  T
Q  253 tttcttt 259  Q
     ||||||    
T  3953902 gttcttt 3953896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 9878789 - 9878709
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||| |||||||||||| | ||||||||||||||||||||  |||||||||  |||||| ||||||||||||||||||    
T  9878789 ggttccttatgtatacgatagtcattttcacctttgggtgtaccgcatatatactgcaccttatatttatcttttaaaaaa 9878709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 34290738 - 34290658
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||| |||||| || | ||||||||||||||||||||  |||||||||| |||||| ||||||||||||||||||    
T  34290738 ggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaa 34290658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 44708481 - 44708561
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||||||||||||||||   ||||||||| |||||| ||||||||||||||||||    
T  44708481 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccggatatatacggcaccttatatttatcttttaaaaaa 44708561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 47467688 - 47467768
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| ||||||||   |||||||||| |||||||||||||||||||||||||    
T  47467688 ggttcctcatgtatacggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaa 47467768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 37168372 - 37168451
Alignment:
Q  154 gttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||||| || | |||||||||||||||| |||  |||||||||| |||||| ||||||||||||||||||    
T  37168372 gttcctcatgtatacggtagtcattttcacctttgggtataccacatatatacggcaccttatatttatcttttaaaaaa 37168451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 222
Target Start/End: Original strand, 29598032 - 29598179
Alignment:
Q  73 ttgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgata 172  Q
    ||||||||| |||||||||||||||||  |||||||| ||||||||||||||| ||||        ||| | ||||||||| ||||||||||||||| ||    
T  29598032 ttgtcttgttttaggcctattagaattaggtcatcttgcttttggtgttaggtggatgttttttt-ggaggctggtttgagattcctcatgtatacggta 29598130  T
Q  173 atgattttcacctttgggtgtacatcatatatacgacaccttgtatttat 222  Q
     ||| ||||| ||||| |||||   ||||||||||  |||||||||||||    
T  29598131 gtga-tttcatctttgagtgtatcacatatatacggaaccttgtatttat 29598179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 42098805 - 42098885
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| || || |||  |||||||||| |||||||||||||||||||||||||    
T  42098805 ggttcctcatgtatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaa 42098885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 50939335 - 50939255
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||| ||||||||||||||   ||||||||| |||||| ||||||||||||||||||    
T  50939335 ggttcctcatgtatacggtagtcatttttacctttgggtgtaccatatatatacggcaccttatatttatcttttaaaaaa 50939255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 53506986 - 53506906
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||| |||||||||||| || | ||||||||||||||||||||  ||||||||||  ||||| ||||||||||||||||||    
T  53506986 ggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaa 53506906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 38681193 - 38681115
Alignment:
Q  155 ttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||| || | |||||||||| ||| |||||  |||| ||||| |||||||||||||||||||||||||    
T  38681193 ttcctcatgtatacggtagtcattttcacctctggatgtaccgcatacatacggcaccttgtatttatcttttaaaaaa 38681115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 27078671 - 27078591
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||| |||||||||||| || | |||||||||| ||||| |||  |||||||||| ||| |||||||||||||||||||||    
T  27078671 ggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaa 27078591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 27084468 - 27084388
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||| |||||||||||| || | |||||||||| ||||| |||  |||||||||| ||| |||||||||||||||||||||    
T  27084468 ggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaa 27084388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 36716103 - 36716047
Alignment:
Q  177 ttttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  36716103 ttttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 36716047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 43207339 - 43207260
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||||||  |||||  |||||||||| |||||| ||||||||||||||||||    
T  43207339 ggttcctcatgtatacggtagtcattttcacctttga-tgtaccgcatatatacggcaccttatatttatcttttaaaaaa 43207260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 53149416 - 53149336
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||| | || || ||||||  |||||||||| |||||||||||||||||||||||||    
T  53149416 ggttcctcatgtatacggtagtcatttttatctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 53149336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 54407252 - 54407180
Alignment:
Q  161 atgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||| || | |||||||||||||| |||||  |||||||||| |||||| ||||||||||||||||||    
T  54407252 atgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaa 54407180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 18372485 - 18372567
Alignment:
Q  155 ttcctcatgtatacgataatgattttcacctttgggtgtacatc----atatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||| || | |||||||||| || ||||||  |    |||||||||||||||||||||||||||||||||||    
T  18372485 ttcctcatgtatacggtagtcattttcacctctgtgtgtaccgcgcgcatatatacgacaccttgtatttatcttttaaaaaa 18372567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 50258726 - 50258645
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcaccttt-gggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||| |||| ||| | ||||||||| |  ||||||||  ||||||||||||||||||||||||| ||||||||||    
T  50258726 ggttcctcatgcatacaatagtcattttcaccctccgggtgtaccgcatatatacgacaccttgtatttattttttaaaaaa 50258645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 36605973 - 36606048
Alignment:
Q  157 cctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||| || | ||||||| || |||||||||  |||||||||| ||||||||||||||||||| |||||    
T  36605973 cctcatgtatacggtagt-attttcatctctgggtgtaccgcatatatacggcaccttgtatttatctttttaaaaa 36606048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 36179705 - 36179630
Alignment:
Q  50 caggtttccactttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggt 125  Q
    ||||||||| |||||||||| | ||||||||| || |||||||||||||||  || |||| |||||||||| ||||    
T  36179705 caggtttccgctttccttttatgttgtcttgttttcggcctattagaattggatcctcttgcttttggtgtcaggt 36179630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 233
Target Start/End: Complemental strand, 23641375 - 23641340
Alignment:
Q  198 catatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||| |||||||||||||||||||||    
T  23641375 catatatacgacacattgtatttatcttttaaaaaa 23641340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 29620490 - 29620423
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtattt 220  Q
    ||||||||||||||||| || | |||||||||| ||| | |||  |||||||||| ||||||||||||    
T  29620490 ggttcctcatgtatacggtagtcattttcacctctggatataccgcatatatacggcaccttgtattt 29620423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 125
Target Start/End: Original strand, 44708435 - 44708477
Alignment:
Q  83 ttaggcctattagaattgtgtcatcttacttttggtgttaggt 125  Q
    |||||||||||||||||  |||||||| |||||||||||||||    
T  44708435 ttaggcctattagaattaggtcatcttgcttttggtgttaggt 44708477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 73 - 328
Target Start/End: Original strand, 52468212 - 52468463
Alignment:
Q  73 ttgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgata 172  Q
    ||||||||| |||||||||||||||||| ||| ||||  |||||| ||||||| | ||       |||| ||||||||||||||||||||| ||||| ||    
T  52468212 ttgtcttgttttaggcctattagaattgagtcctcttgtttttggcgttaggtgggtgtctttttgggaaggtggtttgaggttcctcatgcatacggta 52468311  T
Q  173 atgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttctttnnnnnnnntacat 272  Q
     |||||||||||||||| |||| | |||||||||| |||||||||||||||||||||||||     |||||||||||||| ||||||        ||| |    
T  52468312 gtgattttcacctttggatgtataacatatatacggcaccttgtatttatcttttaaaaaat----ttaaatagaacattgttcttttaaaaaaatacgt 52468407  T
Q  273 ttttattttattataggcctctttttacttacaaagtcgagtctccgaattcgtag 328  Q
    ||||||||||||| || |||||||| || |||| || |||| ||||||||||||||    
T  52468408 ttttattttattacagacctcttttcacctacagagccgagcctccgaattcgtag 52468463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 61 - 330
Target Start/End: Complemental strand, 36118650 - 36118386
Alignment:
Q  61 tttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctc 160  Q
    |||||| |||||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| ||||       |  | ||||||| |||||| |||    
T  36118650 tttcctcttctattgtcttcttttaggcctattagaattgggtcatcttgcttttggtgttaggtggatgtttttttga-agggtggttagaggttactc 36118552  T
Q  161 atgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttctttn 260  Q
    ||||||||| || |||||||||  ||||||||||   |||||||||||||||||||||||||||||||||    ||| |||||||||||||| ||| ||     
T  36118551 atgtatacggtagtgattttcatatttgggtgtatcacatatatacgacaccttgtatttatcttttaaa----aaatttaaatagaacattgttcattt 36118456  T
Q  261 nnnnnnntacatttttattttattataggcctctttttacttacaaagtcgagtctccgaattcgtagga 330  Q
           ||| ||||||||||||||   ||||||||| |||||||||| ||||  |||||||||||||||    
T  36118455 aaaaaaatacgtttttattttattacgagcctcttttcacttacaaagccgagcttccgaattcgtagga 36118386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 35779427 - 35779346
Alignment:
Q  152 aggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||||||| |||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  35779427 aggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaa 35779346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 63 - 233
Target Start/End: Complemental strand, 39329583 - 39329413
Alignment:
Q  63 tccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcat 162  Q
    |||| |||| ||||||||| |||||||||||||||||  ||| |||| |||||||||||| || | ||       |||| |||||||||| ||||||| |    
T  39329583 tcctcttctgttgtcttgttttaggcctattagaatttggtcttcttgcttttggtgttatgtgggtgtttttttgggagggtggtttgatgttcctcct 39329484  T
Q  163 gtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||| ||  |||||||| |||||||||||   ||||||||| ||||||||||||||||||||||||||    
T  39329483 gtatacggtatggattttcatctttgggtgtatcacatatatacaacaccttgtatttatcttttaaaaaa 39329413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 87 - 233
Target Start/End: Original strand, 27111970 - 27112116
Alignment:
Q  87 gcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgataatgattttcacctt 186  Q
    |||||||||||||| ||| |||| ||||| ||||||||| | ||       |||| ||||||||||||||||||||||||||| || |||||||||| ||    
T  27111970 gcctattagaattgagtcctcttgctttttgtgttaggtgggtgtttttctgggagggtggtttgaggttcctcatgtatacggtagtgattttcacatt 27112069  T
Q  187 tgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    | ||||||   |||||||| | |||||||||||||||||||||||||    
T  27112070 ttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaa 27112116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 4168002 - 4167912
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||| |||||||||||||||||||| | || |||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||    
T  4168002 ggtgatttgaggttcctcatgtataaggtagtgattttcacctttgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaa 4167912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 40217156 - 40217318
Alignment:
Q  73 ttgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttg--atgnnnnnnngggatggtggtttgaggttcctcatgtatacga 170  Q
    ||||||||| |||||||||||||||||| ||||| || |||||||||||||||    ||        || | |||||||||||||| |||||||||| |     
T  40217156 ttgtcttgttttaggcctattagaattgggtcattttgcttttggtgttaggtgagtatatttttttggaagggtggtttgaggttactcatgtatatgc 40217255  T
Q  171 taatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||| |||||| ||||   ||||||||||||||||| ||||||||||||||||||    
T  40217256 taatgattttcatctttggatgtatcgcatatatacgacaccttatatttatcttttaaaaaa 40217318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 54780783 - 54780863
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||    
T  54780783 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 54780863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 142 - 233
Target Start/End: Complemental strand, 37745022 - 37744931
Alignment:
Q  142 tggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||||||||| ||||||| || |||||||||||||||| ||||   ||||||| ||||||||| ||||||||||||||||||    
T  37745022 tggtggtttgaggttcctcaagtatacggtagtgattttcacctttggatgtatcgcatatatgcgacaccttatatttatcttttaaaaaa 37744931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 147 - 233
Target Start/End: Complemental strand, 2135428 - 2135342
Alignment:
Q  147 gtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||||| ||||||||| |||| || |||||||| ||||   ||||||||||||||||||||||||||||||||||||    
T  2135428 gtttgaggttcctcatatatacgatagtgatgtttacctttggatgtatcgcatatatacgacaccttgtatttatcttttaaaaaa 2135342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 147 - 233
Target Start/End: Original strand, 24396934 - 24397020
Alignment:
Q  147 gtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||   |||||||||  |||||| ||||||||||||||||||    
T  24396934 gtttgaggttcctcatgtatacgatagtgattttcacctttgagtgtatcacatatatactgcaccttatatttatcttttaaaaaa 24397020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 10978906 - 10978986
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||| | |||||||||  ||||||||||||||||||||||||||||||||||||    
T  10978906 ggttcctcatgtatacggtagtcattttcacttctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaa 10978986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 16845027 - 16845107
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||||| ||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  16845027 ggttcctcatgtatacggtagtcattttcaccgttgggtgtactacatatatacgacaccttatatttatcttttaaaaaa 16845107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 30507296 - 30507196
Alignment:
Q  30 agtactaccccactattcaccaggtttccactttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgat 129  Q
    ||||||||  ||||| || ||||||||||||||||||||| | ||||||||| |||||||||| ||||||| ||| |||| ||||||||||||||| |||    
T  30507296 agtactacttcactactccccaggtttccactttccttttatgttgtcttgttttaggcctataagaattgagtcctcttgcttttggtgttaggtggat 30507197  T
Q  130 g 130  Q
    |    
T  30507196 g 30507196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 32915391 - 32915471
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| |||| ||||| |||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  32915391 ggttcctcatgtatacggtaatcatttttacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaa 32915471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 34027585 - 34027665
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||  || | ||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  34027585 ggttcctcatgtataccgtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaa 34027665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 34768675 - 34768595
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| |||| |||||||||| |||||||||  |||||||||| |||||| ||||||||||||||||||    
T  34768675 ggttcctcatgtatacggtaatcattttcacctctgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaa 34768595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 36178599 - 36178755
Alignment:
Q  73 ttgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgata 172  Q
    ||||||||| ||||||| |||||||| | ||| |||| |||||||||||||||   ||       |||| ||||||||| | ||| ||||||||| | ||    
T  36178599 ttgtcttgttttaggcccattagaatcgggtcctcttgcttttggtgttaggtgagtgtttttttgggagggtggtttg-gattcttcatgtataaggta 36178697  T
Q  173 atgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaa 230  Q
     |||||||||| ||||||||||   |||||||||||||||||||||||||||||||||    
T  36178698 gtgattttcacatttgggtgtatcgcatatatacgacaccttgtatttatcttttaaa 36178755  T

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Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 37777324 - 37777244
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||||||||||||||||  |||||||||| |||||| ||||||||||||||||||    
T  37777324 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaa 37777244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 38209692 - 38209612
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  38209692 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 38209612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 43455632 - 43455552
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||||||||||||||||  |||||||||| |||||| ||||||||||||||||||    
T  43455632 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaa 43455552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 77 - 233
Target Start/End: Original strand, 15735026 - 15735176
Alignment:
Q  77 cttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgataatga 176  Q
    ||||| |||||||| ||||||||| ||| |||| ||||||||||||||| ||||       || | |||||||||| |||||||||||||||| ||||||    
T  15735026 cttgttttaggcctgttagaattgggtcttcttgcttttggtgttaggtggatgtttttttgg-agggtggtttgaagttcctcatgtatacggtaatga 15735124  T
Q  177 ttttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||  ||| |||||     |||||||||||  ||||||||||||||||||||||    
T  15735125 ttttcattttttggtgt-----atatatacgacgtcttgtatttatcttttaaaaaa 15735176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 36363051 - 36362892
Alignment:
Q  73 ttgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgata 172  Q
    ||||||||| |||| ||||||||||||| |||||||  ||||||||||| ||| | ||       | || ||||||||||||||||| ||||||| | ||    
T  36363051 ttgtcttgttttagacctattagaattgagtcatctcgcttttggtgttgggtgggtgctttgttgagagggtggtttgaggttcct-atgtatatggta 36362953  T
Q  173 atgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
     |||||| ||| ||||||||||   |||||||||| ||| |||||||||||||||||||||    
T  36362952 gtgatttccacatttgggtgtattgcatatatacggcactttgtatttatcttttaaaaaa 36362892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 5128945 - 5128863
Alignment:
Q  151 gaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||||| || | |||||||||| |||||| ||  |||||||||| |||||||||||||||||||||||||    
T  5128945 gaggttcctcatgtatacggtagtcattttcacctctgggtgcactgcatatatacggcaccttgtatttatcttttaaaaaa 5128863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 259
Target Start/End: Complemental strand, 2790842 - 2790740
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatt 252  Q
    ||||||||||||||||| || | ||||||||||||||||||||  ||||||||||  ||||| |||||||||||||||||| |    |||||||||||||    
T  2790842 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaata----taaatagaacatt 2790747  T
Q  253 tttcttt 259  Q
     ||||||    
T  2790746 gttcttt 2790740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 259
Target Start/End: Original strand, 47128993 - 47129095
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatt 252  Q
    ||||||||||||||||| || | ||||| |||| |||||||||  |||||||||| ||||||||||||||||||||||||| |    |||||||||||||    
T  47128993 ggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaata----taaatagaacatt 47129088  T
Q  253 tttcttt 259  Q
     ||||||    
T  47129089 gttcttt 47129095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 32128598 - 32128670
Alignment:
Q  161 atgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||| || | ||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  32128598 atgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaa 32128670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 40089522 - 40089601
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaa 232  Q
    ||||||||||||||||| || | |||||||||||||| |||||  |||||||||| |||||| |||||||||||||||||    
T  40089522 ggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaa 40089601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 233
Target Start/End: Original strand, 45656102 - 45656261
Alignment:
Q  73 ttgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgata 172  Q
    ||||||||| |||||||||||||||||| ||||||||  ||||||| | | || |||        |||| ||||||||||||||| ||||||||||| |     
T  45656102 ttgtcttgttttaggcctattagaattgagtcatctttgttttggtatcacgt-gattgttttttgggagggtggtttgaggttcgtcatgtatacgttc 45656200  T
Q  173 atgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
     |||||||||| ||||| | ||   |||||||| ||||||||| |||||||||||||||||    
T  45656201 gtgattttcacatttggatttatcgcatatatatgacaccttgcatttatcttttaaaaaa 45656261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 22077070 - 22077163
Alignment:
Q  32 tactaccccactattcaccaggtttccactttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggt 125  Q
    ||||||||||||| || | ||||||||||||| ||||||| |||||| || |||| ||||||||||||| ||| || | |||||||||||||||    
T  22077070 tactaccccactactcccaaggtttccacttttcttttctgttgtctggttttagacctattagaattgagtcctcatgcttttggtgttaggt 22077163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 13460213 - 13460293
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||| ||||||||| || | |||||||| | ||||| |||  ||||||||||||||||||||||||||||||||||||    
T  13460213 ggttccttatgtatacggtagtcattttcacatctgggtataccgcatatatacgacaccttgtatttatcttttaaaaaa 13460293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 37746914 - 37746850
Alignment:
Q  61 tttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggt 125  Q
    |||||| |||| ||||||||| |||||||||||||||||| |||||||| |||||||||||||||    
T  37746914 tttcctcttctgttgtcttgttttaggcctattagaattgggtcatcttgcttttggtgttaggt 37746850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 54083343 - 54083263
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||| | ||||||||||||  |||||||||| |||||| ||||||||||||||||||    
T  54083343 ggttcctcatgtatacggtagtcatttttatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaa 54083263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 233
Target Start/End: Original strand, 37514671 - 37514745
Alignment:
Q  159 tcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||| || | |||||||||| || ||||||  |||||||||| |||||||||||||||||||||||||    
T  37514671 tcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 37514745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 39655339 - 39655253
Alignment:
Q  169 gataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttcttt 259  Q
    |||||||||||||||||||||||||||  ||||||| ||  || |||||||||||||||||||||     |||||||||||||| ||||||    
T  39655339 gataatgattttcacctttgggtgtaccgcatatatgcggaactttgtatttatcttttaaaaaat----ttaaatagaacattgttcttt 39655253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 51692028 - 51691936
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttg--ggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||| || |||||| | || |||||||||| |||   |||||||  |||||||||| |||||||||||||||||||||||||    
T  51692028 ggtggtttgaggttcatcgtgtatatggtagtgattttcactttttttggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 51691936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 1105538 - 1105618
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||| |||||||||| | || | |||||||||| | |||||||  ||||||||||| ||||||||||||||||||||||||    
T  1105538 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgataccttgtatttatcttttaaaaaa 1105618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 48209246 - 48209326
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||| |||||||||||| || | || ||||| | |||||||||  |||||||||| |||||||||||||||||||||||||    
T  48209246 ggtttctcatgtatacggtagtcatattcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 48209326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 259
Target Start/End: Complemental strand, 10042111 - 10041999
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaa 242  Q
    |||| ||||||||||||| |||||||| || |||||||||| ||| ||||||   |||| ||||| |||||||||||||| |||| |||||     ||||    
T  10042111 ggtgatttgaggttcctcctgtatacggtagtgattttcacatttaggtgtatcacatacatacggcaccttgtatttatttttttaaaaat----ttaa 10042016  T
Q  243 atagaacatttttcttt 259  Q
    |||||||||| ||||||    
T  10042015 atagaacattgttcttt 10041999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 10428273 - 10428218
Alignment:
Q  178 tttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  10428273 tttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 10428218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 30507108 - 30507041
Alignment:
Q  268 tacatttttattttattataggcctctttttacttacaaagtcgagtctccgaattcgtaggatcgac 335  Q
    ||||||||||||||||||| || ||||||| ||||||||| ||||| ||||| |||||||||| ||||    
T  30507108 tacatttttattttattatgggtctcttttcacttacaaaatcgagcctccggattcgtaggaacgac 30507041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 17679432 - 17679486
Alignment:
Q  179 ttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  17679432 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 17679486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 51964737 - 51964812
Alignment:
Q  176 attttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatt 252  Q
    |||||||||| ||||||||   |||||||||| ||||||||||||||||||| ||||| |||  |||||||||||||    
T  51964737 attttcacctctgggtgtatcgcatatatacggcaccttgtatttatctttttaaaaa-aaatataaatagaacatt 51964812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 11906891 - 11906829
Alignment:
Q  268 tacatttttattttattataggcctctttttacttacaaagtcgagtctccgaattcgtagga 330  Q
    ||||||||||||||||||  |||||||||| ||||| | || |||| ||||||||||||||||    
T  11906891 tacatttttattttattacgggcctcttttcacttatatagccgagcctccgaattcgtagga 11906829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 35465115 - 35465192
Alignment:
Q  155 ttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||| || | |||||||| ||| |||||||  |||||||||| |||||| |||||||||| |||||||    
T  35465115 ttcctcatgtatacggtagttattttcacttttaggtgtaccgcatatatacg-caccttttatttatcttgtaaaaaa 35465192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 16922407 - 16922350
Alignment:
Q  176 attttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||||  |||  |||||||||||||| || ||||||||||||||||||    
T  16922407 attttcacctttggggatactgcatatatacgacactttatatttatcttttaaaaaa 16922350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 19498510 - 19498588
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||  || | |||||||||||||| |||||  ||||||  || |||||| ||||||||||||||||||    
T  19498510 ggttcctcatgtatacagtagtcattttcacctttggctgtaccgcatata--cggcaccttatatttatcttttaaaaaa 19498588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 23508564 - 23508532
Alignment:
Q  201 atatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||||||||||||||||||||||    
T  23508564 atatacgacaccttgtatttatcttttaaaaaa 23508532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 327
Target Start/End: Complemental strand, 4167907 - 4167852
Alignment:
Q  272 tttttattttattataggcctctttttacttacaaagtcgagtctccgaattcgta 327  Q
    ||||||||||||||  |||||||||| ||||||||| ||||| ||||| |||||||    
T  4167907 tttttattttattacgggcctcttttcacttacaaaatcgagcctccggattcgta 4167852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 125
Target Start/End: Original strand, 16844981 - 16845023
Alignment:
Q  83 ttaggcctattagaattgtgtcatcttacttttggtgttaggt 125  Q
    |||||||||||||||||  |||||||| |||||||||||||||    
T  16844981 ttaggcctattagaattaggtcatcttgcttttggtgttaggt 16845023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 24969443 - 24969485
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtac 195  Q
    ||||||||||||||||| || | ||||||||||||||||||||    
T  24969443 ggttcctcatgtatacggtagtcattttcacctttgggtgtac 24969485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 38352402 - 38352360
Alignment:
Q  83 ttaggcctattagaattgtgtcatcttacttttggtgttaggt 125  Q
    |||||||||||||||||  |||||||| |||||||||||||||    
T  38352402 ttaggcctattagaattaggtcatcttgcttttggtgttaggt 38352360  T

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Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 2135496 - 2135447
Alignment:
Q  76 tcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggt 125  Q
    |||||| |||||| ||||||||||| ||| |||| |||||||||||||||    
T  2135496 tcttgttttaggcttattagaattgggtcctcttgcttttggtgttaggt 2135447  T

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Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 16882473 - 16882417
Alignment:
Q  176 attttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaa 232  Q
    |||||||||||| |||||||   ||||| ||| |||||| |||||||||||||||||    
T  16882473 attttcaccttttggtgtaccgtatatacacggcaccttatatttatcttttaaaaa 16882417  T

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Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 29425342 - 29425302
Alignment:
Q  85 aggcctattagaattgtgtcatcttacttttggtgttaggt 125  Q
    |||||||||||||||| || ||||||||||| |||||||||    
T  29425342 aggcctattagaattgggttatcttactttttgtgttaggt 29425302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 37777370 - 37777330
Alignment:
Q  83 ttaggcctattagaattgtgtcatcttacttttggtgttag 123  Q
    |||||||||||||||||  |||||||| |||||||||||||    
T  37777370 ttaggcctattagaattaggtcatcttgcttttggtgttag 37777330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 5e-38; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 61 - 222
Target Start/End: Original strand, 37182578 - 37182739
Alignment:
Q  61 tttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctc 160  Q
    |||||| |||||||||||||| |||||||||||||||||| |||||||| |||||| |||||||| | ||       |||| |||| |||||||||||||    
T  37182578 tttcctcttctattgtcttgttttaggcctattagaattgggtcatcttgcttttgctgttaggtgggtgtttttttgggagggtgatttgaggttcctc 37182677  T
Q  161 atgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttat 222  Q
    ||||||||| || |||||||||| ||||||||||   |||||||||||||||||||||||||    
T  37182678 atgtatacggtagtgattttcacttttgggtgtattgcatatatacgacaccttgtatttat 37182739  T

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Target: chr2; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 141 - 335
Target Start/End: Original strand, 16096996 - 16097187
Alignment:
Q  141 atggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaatt 240  Q
    ||||||||||||||||||||||||||| | || | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||     ||    
T  16096996 atggtggtttgaggttcctcatgtataaggtagtaattttcacctttgggtgtacatcatatatacggcaccttgtatttatcttttaaaaaat----tt 16097091  T
Q  241 aaatagaacatttttc-tttnnnnnnnntacatttttattttattataggcctctttttacttacaaagtcgagtctccgaattcgtaggatcgac 335  Q
    |||||||||||| ||| |||        ||||| ||||||||||||  |||| ||||| ||||||| || |||| |||| ||||||||||| ||||    
T  16097092 aaatagaacattgttcttttaaacaaaatacatatttattttattacgggccacttttcacttacagagccgagcctccaaattcgtaggaacgac 16097187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 61 - 258
Target Start/End: Original strand, 38400706 - 38400899
Alignment:
Q  61 tttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctc 160  Q
    |||||| |||| ||||||||| |||||||||||||||| | |||||||| ||||||||||||||| | ||         || ||||||||||||||||||    
T  38400706 tttcctgttctgttgtcttgttttaggcctattagaatagggtcatcttgcttttggtgttaggtgggtgtttttttaagagggtggtttgaggttcctc 38400805  T
Q  161 atgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttctt 258  Q
    ||||||||| || |||||||||||||||  ||||   |||||||| |||||||||||||||||||||||||||     |||||||||||||| |||||    
T  38400806 atgtatacggtagtgattttcacctttgaatgtatcgcatatatatgacaccttgtatttatcttttaaaaaat----ttaaatagaacattgttctt 38400899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 73 - 230
Target Start/End: Complemental strand, 12134222 - 12134065
Alignment:
Q  73 ttgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgata 172  Q
    ||||||||| |||||||||||||||||| ||  |||| |||||||||||||||  |||       |||| ||||||||||||||||| ||||||||| ||    
T  12134222 ttgtcttgttttaggcctattagaattgagttctcttgcttttggtgttaggtgtatgtttttgtgggagggtggtttgaggttcctaatgtatacggta 12134123  T
Q  173 atgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaa 230  Q
     |||||||||| ||||||||||   ||||||||||  |||||||||||||||||||||    
T  12134122 gtgattttcacttttgggtgtatcgcatatatacggtaccttgtatttatcttttaaa 12134065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 16227550 - 16227390
Alignment:
Q  73 ttgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgata 172  Q
    ||||||||| ||| | |||||||||||| |||||||||||||||||||||||| | ||       |||| ||||||||||||||||| |||||||   ||    
T  16227550 ttgtcttgttttatgtctattagaattgagtcatcttacttttggtgttaggtgggtggttttttgggagggtggtttgaggttccttatgtatatagta 16227451  T
Q  173 atgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
     ||||||||| || | ||||||   ||||||||||||||||||||||||||||||||||||    
T  16227450 gtgattttcatctatcggtgtatcacatatatacgacaccttgtatttatcttttaaaaaa 16227390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 61 - 330
Target Start/End: Complemental strand, 24035739 - 24035473
Alignment:
Q  61 tttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctc 160  Q
    |||||| |||| ||||||||| ||||| |||||||||||  ||| |||| ||||| ||||||||| | ||       |||| ||||||||| | ||||||    
T  24035739 tttcctcttctgttgtcttgttttaggtctattagaattaggtcctcttgcttttagtgttaggtgggtgtttttttgggagggtggtttgcgattcctc 24035640  T
Q  161 atgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttc-ttt 259  Q
    |||||| || || |||||||||||||| ||||||   ||| |||||| |||||||||||||||||||||||||     |||||||||||||| ||| |||    
T  24035639 atgtatgcggtagtgattttcacctttaggtgtatcgcatttatacggcaccttgtatttatcttttaaaaaat----ttaaatagaacattgttctttt 24035544  T
Q  260 nnnnnnnntacatttttattttattataggcctctttttacttacaaagtcgagtctccgaattcgtagga 330  Q
            ||| ||||||||||||||  ||| |||||| ||||||||| |||||  |||| ||||||||||    
T  24035543 aaaagaaatacgtttttattttattacgggcatcttttcacttacaaaatcgagcatccggattcgtagga 24035473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 61 - 328
Target Start/End: Complemental strand, 13800738 - 13800474
Alignment:
Q  61 tttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctc 160  Q
    |||||| |||| ||||||||| ||||||||||||||||||  || |||| |||||||||||||||   ||       |||| |||| |||||||||||||    
T  13800738 tttcctcttctgttgtcttgt-ttaggcctattagaattggatcttcttgcttttggtgttaggtgtgtgtttttttgggaaggtgatttgaggttcctc 13800640  T
Q  161 atgtatacgataatgattttcaccttt-gggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttc-tt 258  Q
     ||||||   || |||||||||||||| |||||||   |||||||||| |||||| ||||||||||||||||||     |||||||||||||| ||| ||    
T  13800639 gtgtatatagtagtgattttcaccttttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaat----ttaaatagaacattgttcttt 13800544  T
Q  259 tnnnnnnnntacatttttattttattataggcctctttttacttacaaagtcgagtctccgaattcgtag 328  Q
    |        ||||||||||||||||||    |||||||| ||||||| |||||||||| |||||||||||    
T  13800543 ttaaaaaaatacatttttattttattacgaacctcttttcacttacagagtcgagtcttcgaattcgtag 13800474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 73 - 330
Target Start/End: Complemental strand, 21665882 - 21665629
Alignment:
Q  73 ttgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgata 172  Q
    ||||||||| ||| | |||||||||||| ||| |||| |||| |||||||||| | ||        ||| ||||||||| ||||||||||||||||| ||    
T  21665882 ttgtcttgttttatgtctattagaattgggtcctcttgctttaggtgttaggtgggtgtttttttaggagggtggtttgtggttcctcatgtatacggta 21665783  T
Q  173 atgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttctttnnnnnnnntacat 272  Q
     |||||||||| ||| | ||||   ||||||||||||||| ||||||||||||||||||||     |||||||||||||| ||||||        |||||    
T  21665782 gtgattttcacattttgatgtatcacatatatacgacaccgtgtatttatcttttaaaaaat----ttaaatagaacattgttcttttaaaaaaatacat 21665687  T
Q  273 ttttattttattataggcctctttttacttacaaagtcgagtctccgaattcgtagga 330  Q
    |||||||||||||  || ||||||| ||||||| || |||  ||||  ||||||||||    
T  21665686 ttttattttattacgggtctcttttcacttacagagccgaccctccagattcgtagga 21665629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 29939964 - 29939884
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  29939964 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttgtaaaaaa 29939884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 149 - 231
Target Start/End: Complemental strand, 28425816 - 28425734
Alignment:
Q  149 ttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaa 231  Q
    |||||||||||||| |||| | || |||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||    
T  28425816 ttgaggttcctcatatatatggtagtgattttcacatttgggtgtactgcatatatacgacaccttgtatttatcttttaaaa 28425734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 259
Target Start/End: Original strand, 9046029 - 9046132
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatt 252  Q
    ||||||||||||||||| || | ||||||||||||||||||||  |||||||||| |||||| ||||||||||||||||||  |   |||||||||||||    
T  9046029 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaaata---taaatagaacatt 9046125  T
Q  253 tttcttt 259  Q
     ||||||    
T  9046126 gttcttt 9046132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 12337550 - 12337470
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| |||||||||  |||||||| |||||||||||||||||||||||||||    
T  12337550 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccacatatatatgacaccttgtatttatcttttaaaaaa 12337470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 24410437 - 24410517
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||||||||||||||||  |||||||||| |||||| ||||||||||||||||||    
T  24410437 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaa 24410517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 259
Target Start/End: Original strand, 10252327 - 10252518
Alignment:
Q  73 ttgtcttgtattaggcctattagaattgtgtcatcttacttttggtg-ttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgt-----at 166  Q
    ||||||||| |||||||||||||||||| |||||||| ||||||||| |||||| | ||        ||| ||||||||||||||||||||||     ||    
T  10252327 ttgtcttgttttaggcctattagaattgggtcatcttgcttttggtgtttaggtgggtgttttttttggagggtggtttgaggttcctcatgtatatgat 10252426  T
Q  167 acgataatgattttcacctttgggtgtacatcatatat---acgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttcttt 259  Q
    | |||| || |||||||||||||||||  |  ||||||   ||||||||||||||||||||||||||    ||| |||||| ||||||||||||||    
T  10252427 atgatagtggttttcacctttgggtgtgtagtatatatacgacgacaccttgtatttatcttttaaa----aaatttaaattgaacatttttcttt 10252518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 73 - 227
Target Start/End: Complemental strand, 11912940 - 11912785
Alignment:
Q  73 ttgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnn-gggatggtggtttgaggttcctcatgtatacgat 171  Q
    ||||||||| |||||||||||||||||| ||||||||  ||||||||||||||   ||        |||| ||||||||||||||||| ||||||||| |    
T  11912940 ttgtcttgttttaggcctattagaattgggtcatcttgattttggtgttaggtgagtgttttttttgggagggtggtttgaggttccttatgtatacggt 11912841  T
Q  172 aatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatctttt 227  Q
    | ||||||||| |||||| ||||   |||||||||| ||| |||||||||| ||||    
T  11912840 agtgattttcatctttggatgtattgcatatatacggcactttgtatttatttttt 11912785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 7742245 - 7742156
Alignment:
Q  144 gtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||||||||| |||||||| |  ||||||||||||| ||||   |||||||| ||||| |||||||||||||||||||||    
T  7742245 gtggtttgaggttcctcatgcatacgatagtatttttcacctttggatgtaacgcatatatatgacacattgtatttatcttttaaaaaa 7742156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 3155217 - 3155297
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| | |||||||  |||||||||| |||||||||||||||||||||||||    
T  3155217 ggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 3155297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 3953006 - 3953086
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||| ||||| |||| |||||||||| |||||||||  ||| |||||| |||||||||||||||||||||||||    
T  3953006 ggttcctcatgcatacggtaatcattttcacctctgggtgtaccgcatgtatacggcaccttgtatttatcttttaaaaaa 3953086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 4505894 - 4505974
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||| |||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  4505894 ggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 4505974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 6965007 - 6965087
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| |||||||||  |||||||||| ||| |||||||||||||||||||||    
T  6965007 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaa 6965087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 10762667 - 10762587
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||||||||||||||||  |||||||||  |||||| ||||||||||||||||||    
T  10762667 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatataccgcaccttatatttatcttttaaaaaa 10762587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 26716128 - 26716208
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||||||||||||||||  |||||||| | |||||| ||||||||||||||||||    
T  26716128 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatatggcaccttatatttatcttttaaaaaa 26716208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 61 - 217
Target Start/End: Complemental strand, 11952800 - 11952644
Alignment:
Q  61 tttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctc 160  Q
    |||||| ||| |||||||||| |||||||||||||||||| ||| ||||  ||| ||||||||||   ||       |||| ||||||||||||||||||    
T  11952800 tttcctcttccattgtcttgttttaggcctattagaattgagtcctcttgttttaggtgttaggtgagtgtttttttgggagggtggtttgaggttcctc 11952701  T
Q  161 atgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgta 217  Q
    |||||| |  || ||||||||| || || |||||   |||||||||||||| |||||    
T  11952700 atgtatgcagtagtgattttcatctatgagtgtatcacatatatacgacactttgta 11952644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 27506841 - 27506762
Alignment:
Q  154 gttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||||  || | ||||| ||||||||||||||  |||||||||| |||||| ||||||||||||||||||    
T  27506841 gttcctcatgtatacagtagtcatttttacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaa 27506762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 40636164 - 40636218
Alignment:
Q  179 ttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||||||||||||    
T  40636164 ttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaa 40636218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 22727619 - 22727530
Alignment:
Q  138 gggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatctttt 227  Q
    ||||||||||||||||| |  ||||||||| | || |||||||||| |||||||||||  |||||||||| ||| | |||||||||||||    
T  22727619 gggatggtggtttgagggttatcatgtatatggtagtgattttcacttttgggtgtaccgcatatatacgtcacatagtatttatctttt 22727530  T

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Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 61 - 167
Target Start/End: Original strand, 29694292 - 29694398
Alignment:
Q  61 tttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctc 160  Q
    |||||| |||| ||||||||| |||| ||||||||||||| ||| |||| ||||||||||||||| | ||       ||||| ||||||||||||| |||    
T  29694292 tttcctcttctgttgtcttgttttagacctattagaattgggtcctcttgcttttggtgttaggtgggtgtttttttgggatagtggtttgaggtttctc 29694391  T
Q  161 atgtata 167  Q
    |||||||    
T  29694392 atgtata 29694398  T

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Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 7162784 - 7162864
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||| |||||| || | |||||||||| || || |||  |||||||||| |||||||||||||||||||||||||    
T  7162784 ggttcctcatatatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaa 7162864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 8907181 - 8907101
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||| |||||||||||| || | ||||| |||| |||||||||  |||||||||| | |||||||||||||||||||||||    
T  8907181 ggtttctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcgccttgtatttatcttttaaaaaa 8907101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 42029166 - 42029247
Alignment:
Q  174 tgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttcttt 259  Q
    |||||||||||||| |||||||| ||| |||| |||||||| ||||||||||||||||||     |||||||||||||| ||||||    
T  42029166 tgattttcacctttaggtgtacaacatgtatatgacaccttatatttatcttttaaaaaat----ttaaatagaacattgttcttt 42029247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 480151 - 480222
Alignment:
Q  161 atgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaa 232  Q
    ||||||| |||| |||||||||||||||| |||||||||| ||||| ||||||||||   ||||||||||||    
T  480151 atgtatatgatagtgattttcacctttggatgtacatcatctatacaacaccttgtaacgatcttttaaaaa 480222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 5952791 - 5952737
Alignment:
Q  179 ttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  5952791 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 5952737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 34693998 - 34694055
Alignment:
Q  176 attttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||| |||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  34693998 attttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaa 34694055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 34716410 - 34716467
Alignment:
Q  176 attttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||| |||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  34716410 attttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaa 34716467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 16096680 - 16096746
Alignment:
Q  32 tactaccccactattcaccaggtttccactttccttttctattgtcttgtattaggcctattagaat 98  Q
    ||||||||||||| || |||||||||||| || ||||| | ||||||| | ||||||||||||||||    
T  16096680 tactaccccactactccccaggtttccacattacttttttgttgtcttattttaggcctattagaat 16096746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 330
Target Start/End: Complemental strand, 22727443 - 22727385
Alignment:
Q  272 tttttattttattataggcctctttttacttacaaagtcgagtctccgaattcgtagga 330  Q
    ||||||||||||||   ||||||||| |||||||  |||||| ||||||||||||||||    
T  22727443 tttttattttattacttgcctcttttcacttacagcgtcgagcctccgaattcgtagga 22727385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 27506888 - 27506846
Alignment:
Q  83 ttaggcctattagaattgtgtcatcttacttttggtgttaggt 125  Q
    |||||||||||||||||  |||||||| |||||||||||||||    
T  27506888 ttaggcctattagaattaggtcatcttgcttttggtgttaggt 27506846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 73 - 335
Target Start/End: Original strand, 20611714 - 20611971
Alignment:
Q  73 ttgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgata 172  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||||||||||||   ||       |||| ||| ||||||||||||||||||||||| ||    
T  20611714 ttgtcttgttttaggcctattagaattgggtcattttacttttggtgttaggtgagtgtttttttgggagggtagtttgaggttcctcatgtatacggta 20611813  T
Q  173 atgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttctttnnnnnnnntacat 272  Q
     |||||||||||||||| |||     ||||||||||||||||||||||||| ||||||    ||| |||| |||||||||| || ||         || |    
T  20611814 gtgattttcacctttggatgtgtcgtatatatacgacaccttgtatttatcgtttaaa----aaatttaagtagaacatttatc-ttgaaaaaaaaacgt 20611908  T
Q  273 ttttattttattataggcctctttttacttacaaagtcgagtctccgaattcgtaggatcgac 335  Q
    ||||||||| |||| |||||||||| ||||||| || |||| |||||||||||||||| ||||    
T  20611909 ttttatttttttatgggcctcttttcacttacagagccgagcctccgaattcgtaggaacgac 20611971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 87 - 233
Target Start/End: Complemental strand, 2477752 - 2477606
Alignment:
Q  87 gcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgataatgattttcacctt 186  Q
    |||||||||||||| ||| |||| ||||| ||||||||| | ||       |||| ||||||||||||||||||||||||||| || |||||||||| ||    
T  2477752 gcctattagaattgagtcctcttgctttttgtgttaggtgggtgtttttctgggagggtggtttgaggttcctcatgtatacggtagtgattttcacatt 2477653  T
Q  187 tgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    | ||||||   |||||||| | |||||||||||||||||||||||||    
T  2477652 ttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaa 2477606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 21183787 - 21183697
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||||||||||||| || ||||||||| ||||||||||||  ||||||||||  || |||||||||||||||||||||    
T  21183787 ggtggtttgaggttcctcatgtatacggtagtgattttcaactttgggtgtaccacatatatacgctactttgtatttatcttttaaaaaa 21183697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 13727501 - 13727421
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  13727501 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 13727421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 17353958 - 17354038
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||| |||||||||||||| | |||||||| |||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  17353958 ggttcatcatgtatacgatagtcattttcacatttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaa 17354038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 20711822 - 20711742
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||||||||||||||||  |||||||||| |||||| ||||||||||||||||||    
T  20711822 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaa 20711742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 21479498 - 21479578
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  21479498 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 21479578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 27788790 - 27788710
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||||||||||||||||  |||||||||| |||||| ||||||||||||||||||    
T  27788790 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaa 27788710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 33774121 - 33774201
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||| |||||||||||  |||||||||| |||||||||||||||||||||||||    
T  33774121 ggttcctcatgtatacggtagtcattttcacatttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 33774201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 6159432 - 6159522
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || |||||| || |||||| ||||||||  |||||  |||||||||||||| |||||||||||||||||||||    
T  6159432 ggtggtttgaggttccttatatatacggtagtgatttccacctttgaatgtaccgcatatatacgacacattgtatttatcttttaaaaaa 6159522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 34397859 - 34397941
Alignment:
Q  151 gaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||| ||||||| | ||||| |||||| |||||||  |||||||||| |||||||||||||||||||||||||    
T  34397859 gaggttcctcatgtttacgatagtcatttttacctttaggtgtaccgcatatatacgtcaccttgtatttatcttttaaaaaa 34397941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 24711101 - 24711021
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| || ||||||  |||||||||| |||||||||||||||||||||||||    
T  24711101 ggttcctcatgtatacggtagtcattttcacctctgagtgtaccacatatatacggcaccttgtatttatcttttaaaaaa 24711021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 28075787 - 28075867
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||||||||||||   |||||||||| |||||| ||||||||||||||||||    
T  28075787 ggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaa 28075867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 21280550 - 21280629
Alignment:
Q  154 gttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||||| || | ||||| |||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  21280550 gttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 21280629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 4036942 - 4037031
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaa 232  Q
    |||||||||| ||||||||| |||||| || |||| || ||||||||||||||   ||||||||| |||||||||||||||| |||||||    
T  4036942 ggtggtttgaagttcctcatatatacggtagtgatctttacctttgggtgtaccatatatatacggcaccttgtatttatctcttaaaaa 4037031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 1155947 - 1155871
Alignment:
Q  157 cctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||| || | |||||||||| ||| |||||  |||||||| |||||||||||||||||||||||||||    
T  1155947 cctcatgtatacggtagtcattttcacctctggatgtaccgcatatatatgacaccttgtatttatcttttaaaaaa 1155871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 19737794 - 19737714
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| | |||||||  |||||||||| |||||||||||||||||| ||||||    
T  19737794 ggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatctttaaaaaaa 19737714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 182
Target Start/End: Complemental strand, 27131382 - 27131254
Alignment:
Q  54 tttccactttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgag 153  Q
    |||||||||| || |||| |||||| || |||||| ||||||||||| | | ||||||||||| |||||||| ||||       | || ||| |||||||    
T  27131382 tttccacttttctcttctgttgtctagttttaggcttattagaattgagccttcttacttttgctgttaggtggatgtttttttgtgagggttgtttgag 27131283  T
Q  154 gttcctcatgtatacgataatgattttca 182  Q
     || ||||||||||||||| |||||||||    
T  27131282 atttctcatgtatacgatagtgattttca 27131254  T

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Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 30832626 - 30832546
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||| ||||| || | ||||||| || |||||||||  |||||||||| || ||||||||||| ||||||||||    
T  30832626 ggttcctcatgcatacggtagtcattttcatctctgggtgtaccacatatatacggcatcttgtatttattttttaaaaaa 30832546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 30121787 - 30121846
Alignment:
Q  174 tgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||||| ||||   |||||||| |||||||||||||||| ||||||||||    
T  30121787 tgattttcacctttggatgtatcgcatatatatgacaccttgtatttattttttaaaaaa 30121846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 27314258 - 27314201
Alignment:
Q  176 attttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||| || ||||||  |||||||||| ||||||||||||||||||| |||||    
T  27314258 attttcacctctgagtgtaccgcatatatacggcaccttgtatttatctttttaaaaa 27314201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 235328 - 235246
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatata--cgacaccttgtatttatcttttaaaaaa 233  Q
    |||| |||||||||||| || | ||||||| ||||||||||||   |||||||  || |||||| ||||||||||||||||||    
T  235328 ggtttctcatgtatacggtagtcattttcatctttgggtgtacggtatatatacccggcaccttatatttatcttttaaaaaa 235246  T

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Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 30121692 - 30121747
Alignment:
Q  67 tttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgtta 122  Q
    ||||||||||||||| ||||| |||||||||| | ||| |||| ||||||||||||    
T  30121692 tttctattgtcttgttttaggtctattagaatcgggtcctcttgcttttggtgtta 30121747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 125
Target Start/End: Original strand, 19987119 - 19987161
Alignment:
Q  83 ttaggcctattagaattgtgtcatcttacttttggtgttaggt 125  Q
    |||||||||||||||||  |||||||| |||||||||||||||    
T  19987119 ttaggcctattagaattaggtcatcttgcttttggtgttaggt 19987161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 27994775 - 27994815
Alignment:
Q  155 ttcctcatgtatacgataatgattttcacctttgggtgtac 195  Q
    ||||||||||||||| || ||||||||||||||| ||||||    
T  27994775 ttcctcatgtatacggtagtgattttcacctttgagtgtac 27994815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 68 - 233
Target Start/End: Original strand, 34425819 - 34425984
Alignment:
Q  68 ttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtata 167  Q
    |||| ||||||||| |||||||||||||||||| ||| |||| |||||||||||||||   ||       |||| |||||||||||||||||||||||||    
T  34425819 ttctgttgtcttgttttaggcctattagaattgagtcctcttgcttttggtgttaggtgagtgtttttttgggagggtggtttgaggttcctcatgtata 34425918  T
Q  168 cgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    || |||||||||| | |||| ||||||   |||||||||| |||||||||||||||||||||||||    
T  34425919 cggtaatgattttaatctttaggtgtatcacatatatacggcaccttgtatttatcttttaaaaaa 34425984  T

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Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 139 - 233
Target Start/End: Original strand, 33037767 - 33037861
Alignment:
Q  139 ggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  33037767 ggatggtggtttgaggttcctcatgtatacggtaatggttttcacctttgggtgtacaacatatatacgatatcttgtatttatcttttaaaaaa 33037861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 29 - 259
Target Start/End: Original strand, 10407335 - 10407564
Alignment:
Q  29 aagtactaccccactattcaccaggtttccactttccttttctattgtcttgtattaggcctattagaattgtgtcatcttact---tttggtgttaggt 125  Q
    ||||||| |||||||| |   |||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||| ||   ||||||||||| |    
T  10407335 aagtactgccccactacttctcaggtttccactttccttttctgttgtcttgttttaggcctattagaattgggtcctcttgctccttttggtgttagat 10407434  T
Q  126 tgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatctt 225  Q
      |||       |||||||||||| ||| ||||||||| ||||| || | |||||||| ||| | |||||| ||||| ||||||||||||| ||||||||    
T  10407435 gaatgtttttttgggatggtggttggagattcctcatgcatacggtagtaattttcacttttagatgtacaacatatgtacgacaccttgtgtttatctt 10407534  T
Q  226 ttaaaaaacaaaattaaatagaacatttttcttt 259  Q
    ||||||||     |||||||||||||| ||||||    
T  10407535 ttaaaaaat----ttaaatagaacattgttcttt 10407564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 36868990 - 36868873
Alignment:
Q  138 gggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaa 237  Q
    |||| ||||||||||| ||||||||||||||| || |||||||||| |||||||||||  |||||||||||||||||||||||||||||||||    |||    
T  36868990 gggagggtggtttgagattcctcatgtatacggtagtgattttcacatttgggtgtaccacatatatacgacaccttgtatttatcttttaaa----aaa 36868895  T
Q  238 attaaatagaacatttttcttt 259  Q
    ||||||||||||||| ||||||    
T  36868894 attaaatagaacattgttcttt 36868873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 143 - 305
Target Start/End: Complemental strand, 2531006 - 2530848
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaa 242  Q
    ||||||||||||||||||||||||||  || |||||||||||||||| |||||   ||||||||||||| ||||||||||||||||||||||    ||||    
T  2531006 ggtggtttgaggttcctcatgtatacagtagtgattttcacctttggatgtaccgtatatatacgacacattgtatttatcttttaaaaaac----ttaa 2530911  T
Q  243 atagaacatttttctttnnnnnnnntacatttttattttattataggcctctttttacttaca 305  Q
    ||||||||||||  |||        ||||||||||||||||||  |||||||||| |||||||    
T  2530910 atagaacattttcttttaagaaaaatacatttttattttattacgggcctcttttcacttaca 2530848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 61 - 340
Target Start/End: Complemental strand, 11242509 - 11242234
Alignment:
Q  61 tttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctc 160  Q
    |||||| |||| |||| |||| ||| |||||||||||||| ||| |||| |||||||||||||   | ||       |||| ||||||||||||||||||    
T  11242509 tttcctcttctcttgttttgttttatgcctattagaattgggtcctcttgcttttggtgttagaggggtgtttttttgggagggtggtttgaggttcctc 11242410  T
Q  161 atgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttctttn 260  Q
    ||||||||| || |||||| || |||||| ||||   |||||||||  ||  ||||||||||||||||||    |||||||||||||||||| ||||||     
T  11242409 atgtatacggtagtgatttccatctttggttgtatcacatatatacatcattttgtatttatcttttaaa----aaaattaaatagaacattgttctttt 11242314  T
Q  261 nnnnnnntacatttttattttattataggcctctttttacttacaaagtcgagtctccgaattcgtaggatcgactctgc 340  Q
           ||| ||||||||||||||   | ||||||| ||||||| || |||| ||||| |||| ||||| |||| ||||    
T  11242313 aaaagaatacgtttttattttattacgagtctcttttcacttacagagccgagcctccggattcataggaacgaccctgc 11242234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 259
Target Start/End: Complemental strand, 14318494 - 14318382
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaa 242  Q
    ||||||||||||||||||||||||||| || |||||||||  ||||| ||||   ||||||||||||||||||||||||||||||||||||     ||||    
T  14318494 ggtggtttgaggttcctcatgtatacggtagtgattttcatttttggatgtatcacatatatacgacaccttgtatttatcttttaaaaaat----ttaa 14318399  T
Q  243 atagaacatttttcttt 259  Q
    |||||||||| ||||||    
T  14318398 atagaacattgttcttt 14318382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 73 - 259
Target Start/End: Original strand, 2412010 - 2412191
Alignment:
Q  73 ttgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgata 172  Q
    ||||||||| |||||||||||||||||| |   |||||||||||||||||||  || |       |||| ||||||||||||||||||||||||||  ||    
T  2412010 ttgtcttgttttaggcctattagaattgagcactcttacttttggtgttaggc-gacgttttttagggagggtggtttgaggttcctcatgtatacagta 2412108  T
Q  173 atgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttcttt 259  Q
     |||||||||| ||||| || |   |||||||||||||| |||||||||| ||||||||||     |||||||||||||| ||||||    
T  2412109 gtgattttcacatttggatgcatcgcatatatacgacactttgtatttattttttaaaaaat----ttaaatagaacattgttcttt 2412191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 41911726 - 41911636
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||| ||||||||||||||| ||||||||| ||||||| || |||||||||||  | ||||||||||||||||||||| ||||||||||||    
T  41911726 ggtgatttgaggttcctcatatatacgatagtgatttttacttttgggtgtaccgcttatatacgacaccttgtatttctcttttaaaaaa 41911636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 73 - 259
Target Start/End: Complemental strand, 2024819 - 2024639
Alignment:
Q  73 ttgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgata 172  Q
    ||||||||| |||||| ||||||||||| ||| |||| |||||||||||||||   ||       |||| | |||||||||| |||||||||||| | ||    
T  2024819 ttgtcttgttttaggcatattagaattgagtcctcttgcttttggtgttaggtg--tgtttttttgggaggatggtttgaggatcctcatgtatatggta 2024722  T
Q  173 atgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttcttt 259  Q
     ||||||||| |||||||||||   |||||||||| ||| |||||||||||||| ||||||     |||||||||||||| ||||||    
T  2024721 gtgattttcatctttgggtgtatcacatatatacggcacattgtatttatctttaaaaaaat----ttaaatagaacattgttcttt 2024639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 40794504 - 40794346
Alignment:
Q  73 ttgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgata 172  Q
    ||||||||| |||||| ||||||||||| ||| |||||||||||||||||||||||||          | |||||||||||||| |||||||||||| ||    
T  40794504 ttgtcttgttttaggcttattagaattgggtcctcttacttttggtgttaggttgatgttttttt--tagggtggtttgaggtttctcatgtatacggta 40794407  T
Q  173 atgattttcacctttgggtgta-catcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
     |||||||||||||| |||||| ||| |||| |||| | | |||||||| ||||||||||||    
T  40794406 gtgattttcaccttttggtgtatcat-atatttacggctctttgtatttgtcttttaaaaaa 40794346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 9364292 - 9364372
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||||||||||||||||  |||||||||| |||||| ||||||||||||||||||    
T  9364292 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaa 9364372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 259
Target Start/End: Original strand, 15639570 - 15639749
Alignment:
Q  76 tcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgataatg 175  Q
    |||||| |||||||||||||||||| ||| ||||||||||||||||||||   ||        |    ||||||| |||||||| |||||||||| | ||    
T  15639570 tcttgttttaggcctattagaattgggtcctcttacttttggtgttaggtgagtgtttttttaga---gtggtttaaggttccttatgtatacgacagtg 15639666  T
Q  176 attttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttcttt 259  Q
    ||||||| |||||| ||||   |||||||||| ||||||||||||||| ||||||||| |||| ||||| ||||||| ||||||    
T  15639667 attttcatctttggatgtatcgcatatatacgtcaccttgtatttatc-tttaaaaaaaaaaaataaattgaacattgttcttt 15639749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 16198893 - 16198813
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||    
T  16198893 ggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacgacaccttatatttatcttttaaaaaa 16198813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 16799426 - 16799346
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| |||| ||||||||||||||||||||  |||||||||| |||||| ||||||| ||||||||||    
T  16799426 ggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacggcaccttatatttattttttaaaaaa 16799346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 30854330 - 30854410
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||||||||| | |||||||||| || ||||||  |||||||||| |||||||||||||||||||||||||    
T  30854330 ggttcctcatgtatacgatagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 30854410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 34756465 - 34756385
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | |||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  34756465 ggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 34756385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 38869462 - 38869382
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||| |||||||||||| || | ||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  38869462 ggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaa 38869382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 2274891 - 2274971
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||| |||||||| || | |||||||||| |||||||||  ||||||||||| ||||||||||||||||||||||||    
T  2274891 ggttcctcgtgtatacggtagtcattttcacctctgggtgtactgcatatatacgataccttgtatttatcttttaaaaaa 2274971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 15480188 - 15480108
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||| ||||| || | |||||||||| |||||||||  ||||||||||||| ||||||||||||||||||||||    
T  15480188 ggttcctcatgcatacggtagtcattttcacctctgggtgtaccgcatatatacgacatcttgtatttatcttttaaaaaa 15480108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 19523200 - 19523280
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||| | || | |||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||    
T  19523200 ggttcctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 19523280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 143 - 335
Target Start/End: Complemental strand, 22648845 - 22648658
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaa 242  Q
    |||||||||||||| || || |||||  || ||||| |||||||||| ||| |  |||||||||||||| ||||||||||||||||||    ||| ||||    
T  22648845 ggtggtttgaggtttcttatttatacagtagtgattgtcacctttggatgtgccacatatatacgacacattgtatttatcttttaaa----aaatttaa 22648750  T
Q  243 atagaacatttttctttnnnnnnnntacattttta-ttttattataggcctctttttacttacaaagtcgagtctccgaattcgtaggatcgac 335  Q
    |||||||||| ||| ||        |||||||||| |||||||| |||| |||||| ||||||| || |||||||||| |||||||||| ||||    
T  22648749 atagaacattgttc-ttaaaaaatatacatttttatttttattacaggcttcttttcacttacagag-cgagtctccggattcgtaggaacgac 22648658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 27079012 - 27079092
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||  || | |||||||||||| |||||||  |||||||||| |||||||||||||||||||||||||    
T  27079012 ggttcctcatgtatacagtagtcattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaa 27079092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 28822441 - 28822361
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||| ||||||||||| || | ||||||||||||||||||||  |||||||||| |||||| ||||||||||||||||||    
T  28822441 ggttcatcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaa 28822361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 36187980 - 36187898
Alignment:
Q  151 gaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||| |||||||||||| || | |||||||||| |||||||||  |||||||||| |||||||||||||| ||||||||||    
T  36187980 gaggtttctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatattttaaaaaa 36187898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 7338023 - 7338080
Alignment:
Q  176 attttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||    
T  7338023 attttcacctttaggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaa 7338080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 1366640 - 1366523
Alignment:
Q  138 gggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaa 237  Q
    |||| |||||| ||||||||||||| |||||| || |||||||||| ||| ||||||   ||||||||| ||| |||||||||||||| |||||||        
T  1366640 gggagggtggtatgaggttcctcatatatacggtagtgattttcacatttaggtgtatcgcatatataccacatcttgtatttatcttataaaaaat--- 1366544  T
Q  238 attaaatagaacatttttcttt 259  Q
     |||||||||||||| ||||||    
T  1366543 -ttaaatagaacattgttcttt 1366523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 7079534 - 7079610
Alignment:
Q  54 tttccactttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatg 130  Q
    |||||||||||||||| | ||||||||| |||| ||||||||||||  |||||||| |||||| |||||||||||||    
T  7079534 tttccactttccttttttgttgtcttgttttagacctattagaattaggtcatcttgcttttgatgttaggttgatg 7079610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 16592173 - 16592093
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||| |||||| || | |||||||||| |||||||||  ||||||||||||||| ||||||||||||||| ||||    
T  16592173 ggttcctcatatatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccctgtatttatcttttagaaaa 16592093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 22986657 - 22986577
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||| |||||||||||| || | |||||||||| |||||||||  |||||||||||||| |||||||| ||||||||||||    
T  22986657 ggtttctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacgacactttgtatttgtcttttaaaaaa 22986577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 23284161 - 23284093
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtattta 221  Q
    ||||||||||||||||| || | ||||||| ||||||||||||  ||||||||||||||||||||||||    
T  23284161 ggttcctcatgtatacggtagtcattttcatctttgggtgtaccgcatatatacgacaccttgtattta 23284093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 26719045 - 26718969
Alignment:
Q  156 tcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaa 232  Q
    ||||||||||| || || ||||||||||||||| |||||   |||||||||||||| ||||||||||||||||||||    
T  26719045 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaa 26718969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 26988789 - 26988713
Alignment:
Q  156 tcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaa 232  Q
    ||||||||||| || || ||||||||||||||| |||||   |||||||||||||| ||||||||||||||||||||    
T  26988789 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaa 26988713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 40389635 - 40389555
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||  ||||| || | |||||||||||||| |||||  ||||||||||||||||| ||||||||||||||||||    
T  40389635 ggttcctcataaatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaa 40389555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 138 - 233
Target Start/End: Original strand, 10543660 - 10543754
Alignment:
Q  138 gggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||| ||||||||||| ||||| ||||||||| || |||||||||||||||| ||||   |||||||||  |||||| ||||||||||||||||||    
T  10543660 gggagggtggtttgagattcct-atgtatacggtagtgattttcacctttggatgtatcgcatatatacatcaccttatatttatcttttaaaaaa 10543754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 27924084 - 27924163
Alignment:
Q  154 gttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||||| || | ||||| |||||||| |||||  |||||||||| |||||| ||||||||||||||||||    
T  27924084 gttcctcatgtatacggtagtcatttttacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaa 27924163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 24395730 - 24395820
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||| | ||||||||| |||||| |  |||||||||||||||| ||||    |||||||| ||||||||||||||||||||||||||    
T  24395730 ggtggtttaaagttcctcatctatacggtggtgattttcacctttggatgtattgtatatatacaacaccttgtatttatcttttaaaaaa 24395820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 7670929 - 7671005
Alignment:
Q  157 cctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||| || | ||||||||||||||||||||   | ||||||| |||||| ||||||||||||||||||    
T  7670929 cctcatgtatacggtagtcattttcacctttgggtgtaccgtaaatatacggcaccttatatttatcttttaaaaaa 7671005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 31194706 - 31194631
Alignment:
Q  157 cctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||| || | |||||||||| ||||| |||  |||||||||| |||||||||||||||||||||||||    
T  31194706 cctcatgtatacggtagt-attttcacctctgggtttaccgcatatatacggcaccttgtatttatcttttaaaaaa 31194631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 17344942 - 17345026
Alignment:
Q  138 gggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttat 222  Q
    |||||||||||||||||||| |  || ||||| || | ||||| | ||||||||||||  |||||| | |||| |||||||||||    
T  17344942 gggatggtggtttgaggttctttgtggatacggtagtaatttttatctttgggtgtaccgcatatacatgacatcttgtatttat 17345026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 31881528 - 31881453
Alignment:
Q  157 cctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||| || | ||||||| || ||| ||| |  |||||||||| |||| ||||||||||||||||||||    
T  31881528 cctcatgtatacggtagt-attttcatctctggatgttccgcatatatacggcaccgtgtatttatcttttaaaaaa 31881453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 61 - 232
Target Start/End: Original strand, 1265 - 1434
Alignment:
Q  61 tttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctc 160  Q
    |||||| |||| ||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||  ||        || |  |||||||||||||||||    
T  1265 tttcctcttctgttgtcttgttttaggcctgttagaattgggtcctcttacttttggtgttaggtgaat--ttttttggaagcgtggtttgaggttcctc 1362  T
Q  161 atgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaa 232  Q
    |||||||||||| |||||||||| |||||||||| | |||||||||  |||||| |||||||||||||||||    
T  1363 atgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaa 1434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 375 - 258
Alignment:
Q  138 gggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaa 237  Q
    |||| ||||||||||||||| ||||||||||| || |||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||        
T  375 gggagggtggtttgaggttcatcatgtatacggtagtgattttcacatttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaat--- 279  T
Q  238 attaaatagaacatttttcttt 259  Q
     |||||||||||||| ||||||    
T  278 -ttaaatagaacattgttcttt 258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 24110 - 24015
Alignment:
Q  138 gggatggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||| ||||||||||| ||||| ||| ||||| ||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||    
T  24110 gggagggtggtttgagattccttatgcatacggtaatgattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaa 24015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 61 - 233
Target Start/End: Complemental strand, 173704 - 173532
Alignment:
Q  61 tttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctc 160  Q
    |||||| |||| |||||| || |||||||||||||||||| | | |||| |||||||||||| || | ||       |||| | ||||||||||||||||    
T  173704 tttcctcttctgttgtctagttttaggcctattagaattgagacctcttgcttttggtgttaagtaggtgtttttatgggaggatggtttgaggttcctc 173605  T
Q  161 atgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    | ||||||| || ||||||| |||||||||||||   ||||||||||  ||||||||||||||||||||||||    
T  173604 acgtatacggtagtgatttttacctttgggtgtatcgcatatatacggtaccttgtatttatcttttaaaaaa 173532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 206597 - 206489
Alignment:
Q  147 gtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatag 246  Q
    ||||||||||||||||||||||| || ||||||||||| ||||||||||  ||||||||||||||||||||||||||||||| ||||     ||||||||    
T  206597 gtttgaggttcctcatgtatacggtagtgattttcaccattgggtgtaccgcatatatacgacaccttgtatttatcttttacaaaat----ttaaatag 206502  T
Q  247 aacatttttcttt 259  Q
    |||||| ||||||    
T  206501 aacattcttcttt 206489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 78 - 259
Target Start/End: Complemental strand, 231036 - 230859
Alignment:
Q  78 ttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtttgaggttcctcatgtatacgataatgat 177  Q
    |||| |||||||||||||||| | ||| |||| ||||||||||||||| | ||       |||| |||||||||| |||||||||||||| | || ||||    
T  231036 ttgttttaggcctattagaatcgggtcctcttgcttttggtgttaggtgggtggttttttgggagggtggtttgaagttcctcatgtataaggtagtgat 230937  T
Q  178 tttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatttttcttt 259  Q
    |||||||||||||| ||   ||||||||| |||||||  |||||||||||    |||||| |||||||||||||| ||||||    
T  230936 tttcacctttgggtatatcgcatatatacaacaccttaaatttatctttt----aacaaatttaaatagaacattgttcttt 230859  T

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Target: scaffold0097 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 38916 - 39006
Alignment:
Q  143 ggtggtttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    |||||||||||||||||||| |||||| || |||||||||| |||| |||||   ||||||||||||||||||||||||||||||||||||    
T  38916 ggtggtttgaggttcctcatatatacggtagtgattttcacatttgtgtgtatcgcatatatacgacaccttgtatttatcttttaaaaaa 39006  T

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Target: scaffold0097; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 339
Target Start/End: Original strand, 39045 - 39112
Alignment:
Q  272 tttttattttattataggcctctttttacttacaaagtcgagtctccgaattcgtaggatcgactctg 339  Q
    ||||||||||||||  | |||||||||||||||| | ||||| ||||  |||||||||| ||||||||    
T  39045 tttttattttattacggacctctttttacttacagaatcgagcctccagattcgtaggaacgactctg 39112  T

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Target: scaffold0003 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 50 - 229
Target Start/End: Complemental strand, 351532 - 351360
Alignment:
Q  50 caggtttccactttccttttctattgtcttgtattaggcctattagaattgtgtcatcttacttttggtgttaggttgatgnnnnnnngggatggtggtt 149  Q
    |||||||||||||||||||| | ||||||||| |||| ||||||| ||||| ||       ||||| ||||||||| ||||       ||||| ||||||    
T  351532 caggtttccactttccttttattttgtcttgttttagacctattaaaattgggtg------cttttcgtgttaggtggatgtttttc-gggattgtggtt 351440  T
Q  150 tgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaa 229  Q
    |||||| |||| ||||| |  ||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  351439 tgaggtacctcgtgtattcagtagcgattttcacctttgggtgtacaacatatatacgacaccttgtatttatcttttaa 351360  T

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Target: scaffold0039 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 153 - 259
Target Start/End: Original strand, 106539 - 106641
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaacaaaattaaatagaacatt 252  Q
    ||||||||||||||||| || | ||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||| |    |||||||||||||    
T  106539 ggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaata----taaatagaacatt 106634  T
Q  253 tttcttt 259  Q
     ||||||    
T  106635 gttcttt 106641  T

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Target: scaffold0227 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 15926 - 16095
Alignment:
Q  50 caggtttccactttccttttctattgtcttgtattaggcctattagaattgtg-tcatcttacttttggtgttaggttgatgnnnnnnngggatggtggt 148  Q
    |||||||||||||||||||||| ||||||||| |||||||||||| ||||  | ||||||| |||||| || ||||| | ||         |  ||||||    
T  15926 caggtttccactttccttttctgttgtcttgttttaggcctattataatttggatcatcttgcttttgatgctaggtgggtgttttttttag--ggtggt 16023  T
Q  149 ttgaggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtattt 220  Q
    |||||||| |||||||||||| || ||||||||| |||||| |||||  |||| |||||||| |||||||||    
T  16024 ttgaggtttctcatgtatacggtagtgattttcatctttggatgtaccgcatacatacgacatcttgtattt 16095  T

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Target: scaffold0070 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 1344 - 1424
Alignment:
Q  153 ggttcctcatgtatacgataatgattttcacctttgggtgtacatcatatatacgacaccttgtatttatcttttaaaaaa 233  Q
    ||||||||||||||||| || | ||||||| || |||||||||  |||||||||| || ||||||||||||||||||||||    
T  1344 ggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcagcttgtatttatcttttaaaaaa 1424  T

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