View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0914_low_52 (Length: 312)
Name: NF0914_low_52
Description: NF0914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0914_low_52 |
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Alignment Details
Target: chr1 (Bit Score: 158; Significance: 4e-84; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 75 - 257
Target Start/End: Original strand, 41984146 - 41984328
Alignment:
| Q |
75 |
ataggcacatatatggttagggtgattaatacagcatttgtgaattaggnnnnnnncagtccagtaacatgaagaaataattggtcatgttgggagaaat |
174 |
Q |
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| T |
41984146 |
ataggcacatatatggttagggtgattaatacagcatttgtgaattaggaaaaaaacagtccagtaacatgaagaaataattggtcatgttgggagaaag |
41984245 |
T |
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| Q |
175 |
tgttttttaatttgctatccttactaagtacagaatagtgaaatcaacattagtgaaggccttgttaaaaactatagatgatg |
257 |
Q |
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| T |
41984246 |
tgttttttaatttgctatccttactaagtacagaatagtgaaatcaacattagtgaaggccttgttaaaaactatagatgatg |
41984328 |
T |
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